Rmu_sc0000279.1_g000039

Folate receptor family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000279.1
OG0001032
Physical Location & Seq
Forward (+)
146201 .. 149993
3793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000279.1_g000039.1.cds

Sequence Viewer

Length: 1065 bp
atgggttatggttatctgattttgttgcttcttatcgatacaccggttcctttctcttctggtaaacctgacagagtgtgcatttcccaaggtagtcgttttcctccattctcttctgagggaaagcctccaaaacgggtcagcaagggacccaaagatctgactctttgcagggtgttccgcgaaaaaacttgttgtgatgtagcccagacacatcctgctctgctagccattaggaagttggcttcggcaggggaagcaaactcagagtgcttgcaattatgggaattattggaatgttctatctgtgatccccgcattggtgtgcagccaggacctccagttatatgtgcctctttctgtgacaggatctttaatgcttgttctggggcttactactcaacggatgcaataacacaggttctagcaccctgtggaggaaatgattatgtttgtggtagggcctcggagtggattcttaatggcacagagttctgccatgctgcagggtttgctgttaagggtgatatgtctgagagcctggaagaaacattttgctatggtggtaaagctagtcttgatttgattgcggattcatggaaggtttcacaatctgaggtgccccggaaagttcagagcttgaggctgctagaggatttccagcagagagtgagggaaatgccatatagtgaacgagtttcttgggctgtgggaggattggttcttacagcaggcctgttatttgtaagcagaaggaaaggttataaccagcgccacagacaagccgctttacagcgtaccactaagaaactagaagccaagatgtacctgaaatctgctgatagtcatggaaataggaaactgattctagaagcgttattttatggaattcaaagcttcatggaatatccggatcaggtcaagaattctttaggatttggccttgattcaaaatctaaagattacaagtcgttaacattgtttgtactggggaggaagaatatggcgctgaacatcattgtcatctccttttcaatcctcccacagtacaagtatacaccttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Folate_rec

Protein Analysis

354

Amino Acids

39.29

Weight (kDa)

8.91

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 765
AccB1I GGYRCC 1 cut(s) 619
AccI GTMKAC 1 cut(s) 1055
AccII CGCG 1 cut(s) 183
AccIII TCCGGA 1 cut(s) 910
AciI CCGC 4 cut(s) 181, 316, 590, 786
AclWI GGATC 3 cut(s) 305, 377, 921
AcsI RAATTY 2 cut(s) 888, 925
AdeI CACNNNGTG 1 cut(s) 434
AfaI GTAC 4 cut(s) 799, 827, 987, 1049
AfiI CCNNNNNNNGG 3 cut(s) 320, 437, 471
AgeI ACCGGT 1 cut(s) 43
AgsI TTSAA 3 cut(s) 893, 951, 1035
AjnI CCWGG 2 cut(s) 331, 540
AloI GAACNNNNNNTCC 2 cut(s) 705, 737
AluBI AGCT 3 cut(s) 572, 639, 897
AluI AGCT 3 cut(s) 572, 639, 897
AlwI GGATC 3 cut(s) 305, 377, 921
Aor13HI TCCGGA 1 cut(s) 910
AoxI GGCC 3 cut(s) 462, 733, 940
ApeKI GCWGC 3 cut(s) 328, 503, 646
ApoI RAATTY 2 cut(s) 888, 925
AsiGI ACCGGT 1 cut(s) 43
AspLEI GCGC 2 cut(s) 774, 1009
AspS9I GGNCC 3 cut(s) 149, 335, 462
AsuC2I CCSGG 1 cut(s) 625
AsuHPI GGTGA 1 cut(s) 536
AsuNHI GCTAGC 1 cut(s) 226
AvaII GGWCC 2 cut(s) 149, 335
BaeGI GKGCMC 1 cut(s) 624
BaeI ACNNNNGTAYC 2 cut(s) 30, 63
BanI GGYRCC 1 cut(s) 619
BbvI GCAGC 3 cut(s) 340, 490, 633
BciT130I CCWGG 2 cut(s) 333, 542
BcnI CCSGG 1 cut(s) 625
BfaI CTAG 6 cut(s) 227, 425, 573, 650, 812, 869
BfmI CTRYAG 1 cut(s) 504
BfoI RGCGCY 2 cut(s) 775, 1010
BglII AGATCT 1 cut(s) 157
BisI GCNGC 4 cut(s) 329, 504, 647, 786
BlsI GCNGC 4 cut(s) 330, 505, 648, 787
Bme1390I CCNGG 3 cut(s) 333, 542, 625
Bme18I GGWCC 2 cut(s) 149, 335
BmgT120I GGNCC 3 cut(s) 149, 335, 462
BmiI GGNNCC 4 cut(s) 48, 150, 151, 621
BmrFI CCNGG 3 cut(s) 333, 542, 625
BmrI ACTGGG 1 cut(s) 998
BmsI GCATC 1 cut(s) 397
BmtI GCTAGC 1 cut(s) 230
BmuI ACTGGG 1 cut(s) 998
BpmI CTGGAG 1 cut(s) 324
BpuEI CTTGAG 1 cut(s) 661
BpuMI CCSGG 1 cut(s) 625
Bsa29I ATCGAT 1 cut(s) 36
BsaJI CCNNGG 3 cut(s) 88, 465, 623
BsaWI WCCGGW 2 cut(s) 43, 910
BsaXI ACNNNNNCTCC 2 cut(s) 705, 735
Bsc4I CCNNNNNNNGG 3 cut(s) 320, 437, 471
Bse118I RCCGGY 1 cut(s) 43
Bse1I ACTGG 2 cut(s) 341, 993
BseAI TCCGGA 1 cut(s) 910
BseBI CCWGG 2 cut(s) 333, 542
BseCI ATCGAT 1 cut(s) 36
BseDI CCNNGG 3 cut(s) 88, 465, 623
BseGI GGATG 2 cut(s) 214, 412
BseLI CCNNNNNNNGG 3 cut(s) 320, 437, 471
BseMII CTCAG 4 cut(s) 108, 279, 525, 606
BseNI ACTGG 2 cut(s) 341, 993
BseSI GKGCMC 1 cut(s) 624
BseXI GCAGC 3 cut(s) 340, 490, 633
BsgI GTGCAG 1 cut(s) 347
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 3 cut(s) 464, 735, 942
BshNI GGYRCC 1 cut(s) 619
BshTI ACCGGT 1 cut(s) 43
BshVI ATCGAT 1 cut(s) 36
BsiSI CCGG 3 cut(s) 44, 625, 911
BslFI GGGAC 1 cut(s) 162
BslI CCNNNNNNNGG 3 cut(s) 320, 437, 471
BsmFI GGGAC 1 cut(s) 162
BsnI GGCC 3 cut(s) 464, 735, 942
Bsp1286I GDGCHC 1 cut(s) 624
Bsp13I TCCGGA 1 cut(s) 910
Bsp143I GATC 4 cut(s) 157, 310, 369, 913
BspACI CCGC 4 cut(s) 181, 316, 590, 786
BspANI GGCC 3 cut(s) 464, 735, 942
BspCNI CTCAG 4 cut(s) 109, 278, 526, 607
BspDI ATCGAT 1 cut(s) 36
BspEI TCCGGA 1 cut(s) 910
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 4 cut(s) 48, 150, 151, 621
BspMAI CTGCAG 1 cut(s) 508
BspOI GCTAGC 1 cut(s) 230
BspPI GGATC 3 cut(s) 305, 377, 921
BspT107I GGYRCC 1 cut(s) 619
BsrFI RCCGGY 1 cut(s) 43
BsrI ACTGG 2 cut(s) 341, 993
BssAI RCCGGY 1 cut(s) 43
BssECI CCNNGG 3 cut(s) 88, 465, 623
BssMI GATC 4 cut(s) 157, 310, 369, 913
BssNAI GTATAC 1 cut(s) 1056
BssT1I CCWWGG 1 cut(s) 88
Bst1107I GTATAC 1 cut(s) 1056
Bst2UI CCWGG 2 cut(s) 333, 542
Bst4CI ACNGT 1 cut(s) 1047
Bst6I CTCTTC 2 cut(s) 61, 118
BstAPI GCANNNNNTGC 1 cut(s) 512
BstC8I GCNNGC 3 cut(s) 228, 275, 733
BstDEI CTNAG 6 cut(s) 117, 265, 534, 615, 804, 1062
BstF5I GGATG 2 cut(s) 214, 412
BstFNI CGCG 1 cut(s) 183
BstH2I RGCGCY 2 cut(s) 775, 1010
BstHHI GCGC 2 cut(s) 774, 1009
BstKTI GATC 4 cut(s) 160, 313, 372, 916
BstMBI GATC 4 cut(s) 157, 310, 369, 913
BstMWI GCNNNNNNNGC 3 cut(s) 227, 257, 512
BstNI CCWGG 2 cut(s) 333, 542
BstSCI CCNGG 3 cut(s) 331, 540, 623
BstSFI CTRYAG 1 cut(s) 504
BstSLI GKGCMC 1 cut(s) 624
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 3 cut(s) 340, 490, 633
BstX2I RGATCY 2 cut(s) 157, 369
BstYI RGATCY 2 cut(s) 157, 369
BstZ17I GTATAC 1 cut(s) 1056
Bsu15I ATCGAT 1 cut(s) 36
BsuRI GGCC 3 cut(s) 464, 735, 942
BsuTUI ATCGAT 1 cut(s) 36
BtsCI GGATG 2 cut(s) 214, 412
Cac8I GCNNGC 3 cut(s) 228, 275, 733
CfoI GCGC 2 cut(s) 774, 1009
Cfr10I RCCGGY 1 cut(s) 43
Cfr13I GGNCC 3 cut(s) 149, 335, 462
ClaI ATCGAT 1 cut(s) 36
Csp6I GTAC 4 cut(s) 798, 826, 986, 1048
CspAI ACCGGT 1 cut(s) 43
CviAII CATG 4 cut(s) 500, 597, 848, 901
CviQI GTAC 4 cut(s) 798, 826, 986, 1048
DdeI CTNAG 6 cut(s) 117, 265, 534, 615, 804, 1062
DpnI GATC 4 cut(s) 159, 312, 371, 915
DpnII GATC 4 cut(s) 157, 310, 369, 913
DraIII CACNNNGTG 1 cut(s) 434
Eam1104I CTCTTC 2 cut(s) 61, 118
EarI CTCTTC 2 cut(s) 61, 118
Eco130I CCWWGG 1 cut(s) 88
Eco147I AGGCCT 1 cut(s) 735
Eco47I GGWCC 2 cut(s) 149, 335
EcoO109I RGGNCCY 3 cut(s) 149, 335, 462
EcoRI GAATTC 2 cut(s) 888, 925
EcoRII CCWGG 2 cut(s) 331, 540
EcoT14I CCWWGG 1 cut(s) 88
ErhI CCWWGG 1 cut(s) 88
FaeI CATG 4 cut(s) 503, 600, 851, 904
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 1 cut(s) 162
FatI CATG 4 cut(s) 499, 596, 847, 900
FauI CCCGC 1 cut(s) 323
FblI GTMKAC 1 cut(s) 1055
Fnu4HI GCNGC 4 cut(s) 329, 504, 647, 786
FokI GGATG 2 cut(s) 201, 419
Fsp4HI GCNGC 4 cut(s) 329, 504, 647, 786
FspBI CTAG 6 cut(s) 227, 425, 573, 650, 812, 869
GlaI GCGC 2 cut(s) 773, 1008
GluI GCNGC 4 cut(s) 329, 504, 647, 786
GsuI CTGGAG 1 cut(s) 324
HaeII RGCGCY 2 cut(s) 775, 1010
HaeIII GGCC 3 cut(s) 464, 735, 942
HapII CCGG 3 cut(s) 44, 625, 911
HhaI GCGC 2 cut(s) 774, 1009
Hin1II CATG 4 cut(s) 503, 600, 851, 904
Hin6I GCGC 2 cut(s) 772, 1007
HinP1I GCGC 2 cut(s) 772, 1007
HincII GTYRAC 1 cut(s) 975
HindII GTYRAC 1 cut(s) 975
HindIII AAGCTT 1 cut(s) 895
HinfI GANTC 5 cut(s) 163, 475, 593, 865, 947
HpaI GTTAAC 1 cut(s) 975
HpaII CCGG 3 cut(s) 44, 625, 911
HphI GGTGA 1 cut(s) 536
Hpy166II GTNNAC 4 cut(s) 65, 692, 975, 1056
Hpy188I TCNGA 8 cut(s) 18, 118, 162, 268, 469, 535, 616, 636
Hpy188III TCNNGA 4 cut(s) 578, 869, 911, 922
Hpy8I GTNNAC 4 cut(s) 65, 692, 975, 1056
HpyAV CCTTC 2 cut(s) 595, 747
HpyCH4III ACNGT 1 cut(s) 1047
HpyCH4V TGCA 6 cut(s) 81, 171, 277, 328, 410, 506
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 257, 512
HpyF3I CTNAG 6 cut(s) 117, 265, 534, 615, 804, 1062
Hsp92II CATG 4 cut(s) 503, 600, 851, 904
HspAI GCGC 2 cut(s) 772, 1007
KflI GGGWCCC 1 cut(s) 149
Kpn2I TCCGGA 1 cut(s) 910
KspAI GTTAAC 1 cut(s) 975
Kzo9I GATC 4 cut(s) 157, 310, 369, 913
Lsp1109I GCAGC 3 cut(s) 340, 490, 633
LweI GCATC 1 cut(s) 397
MaeI CTAG 6 cut(s) 227, 425, 573, 650, 812, 869
MaeIII GTNAC 1 cut(s) 362
MalI GATC 4 cut(s) 159, 312, 371, 915
MboI GATC 4 cut(s) 157, 310, 369, 913
MboII GAAGA 4 cut(s) 48, 105, 557, 1009
MflI RGATCY 2 cut(s) 157, 369
MhlI GDGCHC 1 cut(s) 624
MluCI AATT 4 cut(s) 278, 287, 888, 925
MlyI GAGTC 1 cut(s) 157
MroI TCCGGA 1 cut(s) 910
MseI TTAA 4 cut(s) 375, 480, 519, 974
MslI CAYNNNNRTG 1 cut(s) 323
MspI CCGG 3 cut(s) 44, 625, 911
MspR9I CCNGG 3 cut(s) 333, 542, 625
MvaI CCWGG 2 cut(s) 333, 542
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 3 cut(s) 227, 257, 512
NciI CCSGG 1 cut(s) 625
NdeII GATC 4 cut(s) 157, 310, 369, 913
NheI GCTAGC 1 cut(s) 226
NlaIII CATG 4 cut(s) 503, 600, 851, 904
NlaIV GGNNCC 4 cut(s) 48, 150, 151, 621
NmuCI GTSAC 1 cut(s) 362
PceI AGGCCT 1 cut(s) 735
PfeI GAWTC 4 cut(s) 475, 593, 865, 947
PinAI ACCGGT 1 cut(s) 43
PkrI GCNGC 4 cut(s) 330, 505, 648, 787
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
PpuMI RGGWCCY 2 cut(s) 149, 335
PsiI TTATAA 1 cut(s) 765
Psp5II RGGWCCY 2 cut(s) 149, 335
Psp6I CCWGG 2 cut(s) 331, 540
PspGI CCWGG 2 cut(s) 331, 540
PspN4I GGNNCC 4 cut(s) 48, 150, 151, 621
PspPI GGNCC 3 cut(s) 149, 335, 462
PspPPI RGGWCCY 2 cut(s) 149, 335
PstI CTGCAG 1 cut(s) 508
PsuI RGATCY 2 cut(s) 157, 369
RsaI GTAC 4 cut(s) 799, 827, 987, 1049
RsaNI GTAC 4 cut(s) 798, 826, 986, 1048
RseI CAYNNNNRTG 1 cut(s) 323
SaqAI TTAA 4 cut(s) 375, 480, 519, 974
SatI GCNGC 4 cut(s) 329, 504, 647, 786
Sau3AI GATC 4 cut(s) 157, 310, 369, 913
Sau96I GGNCC 3 cut(s) 149, 335, 462
SchI GAGTC 1 cut(s) 157
ScrFI CCNGG 3 cut(s) 333, 542, 625
SduI GDGCHC 1 cut(s) 624
SfaNI GCATC 1 cut(s) 397
SfcI CTRYAG 1 cut(s) 504
SinI GGWCC 2 cut(s) 149, 335
SmiMI CAYNNNNRTG 1 cut(s) 323
SmlI CTYRAG 1 cut(s) 640
SmoI CTYRAG 1 cut(s) 640
Sse9I AATT 4 cut(s) 278, 287, 888, 925
SseBI AGGCCT 1 cut(s) 735
SsiI CCGC 4 cut(s) 181, 316, 590, 786
SspMI CTAG 6 cut(s) 227, 425, 573, 650, 812, 869
StuI AGGCCT 1 cut(s) 735
StyD4I CCNGG 3 cut(s) 331, 540, 623
StyI CCWWGG 1 cut(s) 88
TaaI ACNGT 1 cut(s) 1047
TaqI TCGA 1 cut(s) 36
TasI AATT 4 cut(s) 278, 287, 888, 925
TatI WGTACW 2 cut(s) 985, 1047
TauI GCSGC 1 cut(s) 788
TfiI GAWTC 4 cut(s) 475, 593, 865, 947
Tru1I TTAA 4 cut(s) 375, 480, 519, 974
Tru9I TTAA 4 cut(s) 375, 480, 519, 974
TseFI GTSAC 1 cut(s) 362
TseI GCWGC 3 cut(s) 328, 503, 646
Tsp45I GTSAC 1 cut(s) 362
TspDTI ATGAA 2 cut(s) 585, 889
TspGWI ACGGA 1 cut(s) 419
VpaK11BI GGWCC 2 cut(s) 149, 335
XapI RAATTY 2 cut(s) 888, 925
XbaI TCTAGA 1 cut(s) 868
XcmI CCANNNNNNNNNTGG 1 cut(s) 238
XmiI GTMKAC 1 cut(s) 1055
XspI CTAG 6 cut(s) 227, 425, 573, 650, 812, 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.