Rh4AG397800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
70231488 .. 70231799
312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG397800.1

Sequence Viewer

Length: 312 bp
ATGCATGATCTAATGACCAAAAAATATGAACTGCCTTTACAGTTTGTGGCCTTGAAAATCAGTGCTTACTATGTACTCTTACCGTACATTTTCGAAAGCAAGAGGGAGAGGTTGCAATCATATTCTGATTTTCTACTTAAAGGTTGTACTGGTCCGCAGAACGATAACGCATGGATTAAGTGCATCGAGGTACAACAGTGGGTTGCAATGTATGAGAGTGATAATGGTGAGTTTTCTGTGACTTTTGAGATAACAAGCATGATGCAGGACAGCACAAGGTGGGTTACTGCCTATAATTGTGCTGAGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

103

Amino Acids

12.1

Weight (kDa)

4.84

Isoelectric Point (pI)

50.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 155
AdeI CACNNNGTG 1 cut(s) 279
AfaI GTAC 4 cut(s) 75, 86, 148, 192
AgsI TTSAA 1 cut(s) 55
AoxI GGCC 1 cut(s) 48
AspS9I GGNCC 1 cut(s) 152
AsuHPI GGTGA 1 cut(s) 239
AsuII TTCGAA 1 cut(s) 93
AvaII GGWCC 1 cut(s) 152
BaeI ACNNNNGTAYC 2 cut(s) 182, 215
BlpI GCTNAGC 1 cut(s) 303
Bme18I GGWCC 1 cut(s) 152
BmgT120I GGNCC 1 cut(s) 152
BmsI GCATC 2 cut(s) 192, 252
Bpu1102I GCTNAGC 1 cut(s) 303
Bpu14I TTCGAA 1 cut(s) 93
Bse1I ACTGG 1 cut(s) 154
Bse3DI GCAATG 1 cut(s) 213
BseMI GCAATG 1 cut(s) 213
BseMII CTCAG 1 cut(s) 294
BseNI ACTGG 1 cut(s) 154
BshFI GGCC 1 cut(s) 50
BsnI GGCC 1 cut(s) 50
Bsp119I TTCGAA 1 cut(s) 93
Bsp143I GATC 1 cut(s) 7
Bsp1720I GCTNAGC 1 cut(s) 303
BspACI CCGC 1 cut(s) 155
BspANI GGCC 1 cut(s) 50
BspCNI CTCAG 1 cut(s) 295
BspT104I TTCGAA 1 cut(s) 93
BsrDI GCAATG 1 cut(s) 213
BsrI ACTGG 1 cut(s) 154
BssMI GATC 1 cut(s) 7
Bst4CI ACNGT 3 cut(s) 42, 84, 198
BstBI TTCGAA 1 cut(s) 93
BstDEI CTNAG 2 cut(s) 303, 309
BstKTI GATC 1 cut(s) 10
BstMBI GATC 1 cut(s) 7
BsuRI GGCC 1 cut(s) 50
BtsIMutI CAGTG 2 cut(s) 67, 203
Cfr13I GGNCC 1 cut(s) 152
Csp6I GTAC 4 cut(s) 74, 85, 147, 191
CviAII CATG 3 cut(s) 5, 171, 259
CviJI RGCY 2 cut(s) 50, 307
CviKI_1 RGCY 2 cut(s) 50, 307
CviQI GTAC 4 cut(s) 74, 85, 147, 191
DdeI CTNAG 2 cut(s) 303, 309
DpnI GATC 1 cut(s) 9
DpnII GATC 1 cut(s) 7
DraIII CACNNNGTG 1 cut(s) 279
Eco47I GGWCC 1 cut(s) 152
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 3 cut(s) 8, 174, 262
FaiI YATR 8 cut(s) 6, 27, 72, 121, 172, 213, 260, 294
FatI CATG 3 cut(s) 4, 170, 258
HaeIII GGCC 1 cut(s) 50
Hin1II CATG 3 cut(s) 8, 174, 262
HphI GGTGA 1 cut(s) 239
Hpy188I TCNGA 1 cut(s) 127
HpyCH4III ACNGT 3 cut(s) 42, 84, 198
HpyCH4V TGCA 5 cut(s) 4, 115, 183, 206, 265
HpyF3I CTNAG 2 cut(s) 303, 309
Hsp92II CATG 3 cut(s) 8, 174, 262
Kzo9I GATC 1 cut(s) 7
LpnPI CCDG 2 cut(s) 135, 251
LweI GCATC 2 cut(s) 192, 252
MaeIII GTNAC 2 cut(s) 238, 283
MalI GATC 1 cut(s) 9
MboI GATC 1 cut(s) 7
MluCI AATT 1 cut(s) 295
MnlI CCTC 3 cut(s) 96, 102, 181
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 2 cut(s) 138, 177
NdeII GATC 1 cut(s) 7
NlaIII CATG 3 cut(s) 8, 174, 262
NmuCI GTSAC 1 cut(s) 238
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 93
PspPI GGNCC 1 cut(s) 152
PsrI GAACNNNNNNTAC 2 cut(s) 21, 53
RsaI GTAC 4 cut(s) 75, 86, 148, 192
RsaNI GTAC 4 cut(s) 74, 85, 147, 191
SaqAI TTAA 2 cut(s) 138, 177
Sau3AI GATC 1 cut(s) 7
Sau96I GGNCC 1 cut(s) 152
SetI ASST 4 cut(s) 113, 145, 192, 281
SfaNI GCATC 2 cut(s) 192, 252
SfuI TTCGAA 1 cut(s) 93
SinI GGWCC 1 cut(s) 152
Sse9I AATT 1 cut(s) 295
SsiI CCGC 1 cut(s) 155
TaaI ACNGT 3 cut(s) 42, 84, 198
TaqI TCGA 2 cut(s) 93, 186
TasI AATT 1 cut(s) 295
TatI WGTACW 2 cut(s) 73, 146
Tru1I TTAA 2 cut(s) 138, 177
Tru9I TTAA 2 cut(s) 138, 177
TscAI CASTG 2 cut(s) 67, 203
TseFI GTSAC 1 cut(s) 238
Tsp45I GTSAC 1 cut(s) 238
TspDTI ATGAA 1 cut(s) 42
TspRI CASTG 2 cut(s) 67, 203
VpaK11BI GGWCC 1 cut(s) 152
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.