Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0003471

Physical Location & Seq

Genomic Coordinates Reverse (-)

21248317 .. 21253521

Gene Structure 5205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGACGTTGACATCTCTCAACTCTTCTCCCCCACTCTCTAGCTTCCCCCCAACTGCTTTGTACAGCAAAGCAATTACTTTTCATTTCATTTTCTCGAGCTTTTTTTCTCGGGAACCAAACACCCTGTGCCCCGCCATGGCTTCCGAACCGGAGGACGGGAAGAGCTGGGAGGACCTCCTCAGAAAGATGCTGCCTGCCGGCGCATCATTACCCGACGAAGAGCACCTCGACTACTCCATCGCCGTCGAATACGAAGGCTCTCCTCTGCCCTACGACCCGCCCAAGGTTGATCCGGTTAACCTCGGCTCTCTCAATCTTTACTCTTCTTCCGTGACCGCTGGTTCGGTTCAAGCCCCGTCTTCGATTCCGGTGGCGTCGCCGGTCGGTCAGAAGGTCTCGCGGTTCAGTCGGATGAGGAACGGCGGCGTTGTGAAGGAGACGAGTAGAACGACGTCGTCTTCGACTCCGAGGACGCAACCGGAGCTGCGAAACAGCAGGGAAGGGTCGGAATTTGAAGGAGCTGAGGAAGGTTTCAGCTCTGAGTTGCCGGCTCAAGACTCGGACTTGGAGCACAAACCGATCGGCGGCGCCACCGGAGGAAAGAGGGCGGCTGTCGTGACTTTCAATGAACCAAGAGATTCGGAGAACGAGGACGAGGGTGAAGATAACGACTCGTCCCCGCAATCGAGCGCGGCCACCGAACAGGTGGGATCGCCGGTTGTAGGGGCCTCTTCGCCAGGGAGGCGATCGAGTAAGAGAGGGATTTGCAGCAGGTGCGGGAAAGGGAACAGATTGAAGGAGAGAGAGTGGTGTTTGGTGTGCGACGCCAAGTATTGCAGCAATTGCTTGCTGAAGGCGATGGGGTCGATGCCGGAGGGGAGGAAATGTGTGAGCTGCATTGGGCAGCCAATAGACGAGTCCAAGAGGTCAAACTTGGGGAAGTGTTCGAGGATCCTGTCGAGGGTTTGCAGCCCTTTGGAGATTCGGCAGATAATGAGGGGCGAGAAGGAGTGCCCCGCCAATCAGCTTCGGCCGGAGCAGTTGGTTGTGAATGGAAGCAAGCTGAGGGAAGAAGAACTGGCTGAGATTTTGGGATGTGAATTGCCTCCTCAGAAGTTGAAACCTGGGAGGTATTGGTACGATAAGGATTCCGGTCTTTGGGGAAAGGAGGGTGAGAAGCCGGATAGGATTATTAGCTCGAAACTCAATGTTGGGGGTAAGATTCGGTTTGATGCAAGCAATGGGAACACCAAAGTGTTCATGAATGGCCGAGAGATCACAAAGATTGAGCTGAGGGTGTTGAAGCTGGCCAAAGTGCAGTGCCCTCCGGATACTCATTTTTGGGTGTATGATGATGGTTCTTATGAGGAGGAAGGTCAGAATAACATTAAAGGGAATATATGGGGAAAGGCATCCACTCGTTTCATTTGTTCATTATTCTCATTGCCTGTACCACCTGGTAATCAAAATGGGGCACAAGAAGATCCGATGACACCTTCAAGCAGGTCAGTCCGGGAATTCTGGGAACAGGGAAGAGTTCAGAAACTTCTGTTATTTGGCTCGGAGGGATCTGGAACTAGCACCATCTTCAAGCAGGCTAAGCTCTTATATGGGAACAAGTTCACTTCCGAAGAGCTGCAGAACATCAAACTCATGATTCAGAGCAATATGTATAAGTATCTAAGTATATTACTTGAGGGCCGAGAACGTTTTGAAGAGGAAGCGTTGACGGAGAATAGGATATCTTTGTTGGCTGCTCATGAGTCCCCTTCAGTAGTTGATGAAAGAGAGCAGTGCATCTATGCAATCAACCAAAGGTTCAAGCACTTTTCTGACTGGTTACTGGATATCATGGCAACCGGAGACTTGGATGCATTCTTTCCTGCTGCGACACGTGAGTATGCTCCTATTGTGGATGAATTGTGGAGAGATTCTGCCATCCAGGAAACATACAAAAGGAGGGAGGAACTAGACTGCCTTCCTGAAGTTGCCAAATATTTCTTAGATCGGGCTATAGAAATATCAAGTAACGAGTATGAGCCCTCCGAGAAAGACATTTTATATGCTGAGGGCGTTACACAGAGCAATGGGCTTGCCTCTATGGAATTTTCATTTGATGACAGAAGTGCCACGTCTGAGCTATACAAAGAAAACTATGAATGTCCCCTTCCCTTGACTAAGTATCAACTAATTCGCATTAATTCCAAGGGACTGAGTGATGGTTGCAAATGGCTGGAAATGTTTGAAGATGTGAGGGCAGTGATTTTTTGTGTTGTGTTGAGTGACTATGATCAAATGTGGGCCCACGGTAATGGTCTTCTTCGTAATAAAATGCTGGCAAGCAGAGATTTGTTTGAGAGTTTGGTACGGCACCCTTGTTTCAGAGACACTCCGTTTGTGCTCTTTCTGAACAAATACGATGCCTTTGAAGGCAAGATAAACCAGGTTCCGTTGTCTGCCTGCGAGTGGCTAAAGGACTTCAGTCCTGTTAAGCGTCATGGTAATAGTCAGTCTCTGGCACAGCAAGCATATTATTACGTGGCGGTGAAATTCAAAGAGCTGTATTCATCCATAAGCGGCGAAAAGTTGTTTGTGGCGCAGACCCGAGCTCGGGAGGCTGCCTCAGTTGACGAGGCATTCAAGTACGTACGGGAGGTCCTCAAGTGGGATGAAGAAAAGAATGATAATTTCTTTGCAGTAAATGGGGACGACTCATTTTACAGCACGGAGATGAGTTCTTCTCCATATGTCAGGCAGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04015 ko04022 ko04024 ko04062 ko04071 ko04261 ko04360 ko04371 ko04540 ko04611 ko04670 ko04713 ko04723 ko04724 ko04725 ko04726 ko04727 ko04728 ko04730 ko04914 ko04915 ko04916 ko04921 ko04923 ko04924 ko04926 ko04934 ko04971 ko05012 ko05030 ko05032 ko05034 ko05133 ko05142 ko05145 ko05200 map04015 map04022 map04024 map04062 map04071 map04261 map04360 map04371 map04540 map04611 map04670 map04713 map04723 map04724 map04725 map04726 map04727 map04728 map04730 map04914 map04915 map04916 map04921 map04923 map04924 map04926 map04934 map04971 map05012 map05030 map05032 map05034 map05133 map05142 map05145 map05200

Pfam Domains

Protein Families

G-alpha

Protein Analysis

921

Amino Acids

103.29

Weight (kDa)

5.27

Isoelectric Point (pI)

53.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-alpha	PF00503	513 - 886	9.1e-72	G-protein alpha subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003471)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17740 FvH4_5g17740
malus_domestica	MD06G1232900.v1.1 MD14G1239900.v1.1
prunus_persica	Prupe.5G237500_v2.0.a1 Prupe.5G237500_v2.0.a1
pyrus_communis	pycom06g20790 pycom14g20150
rosa_chinensis	RchiOBHm_Chr5g0016271 RchiOBHm_Chr7g0177881
rosa_laevigata	RLG00000003463 RLG00000005494 RLG00000019305 RLG00000035269
rosa_multiflora	Rmu_sc0000141.1_g000001 Rmu_sc0004510.1_g000005 Rmu_sc0006214.1_g000003 Rmu_sc0006997.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129380 Rroxscaffold_3G00275470
rosa_rugosa	Rorug04G0425800 Rorug06G0410700 Rorug06G0410800
rosa_samantha	Rh1CG219000 Rh4CG242300 Rh5AG324200 Rh5CG136200 Rh7AG009900 Rh7AG127600 Rh7BG010000 Rh7BG128600 Rh7BG129500 Rh7CG130400 Rh7CG131800 Rh7DG010000
rosa_wichuraiana	Rw7G000830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	762
AatII	GACGTC	1 cut(s)	455
Acc36I	ACCTGC	2 cut(s)	762, 1494
AccB1I	GGYRCC	2 cut(s)	587, 2370
AccII	CGCG	2 cut(s)	400, 692
AccIII	TCCGGA	1 cut(s)	1327
AclI	AACGTT	1 cut(s)	1708
AclWI	GGATC	6 cut(s)	284, 718, 946, 959, 1478, 1576
AcoI	YGGCCR	4 cut(s)	693, 1031, 1267, 1308
AcsI	RAATTY	4 cut(s)	509, 1517, 2105, 2549
AcuI	CTGAAG	4 cut(s)	872, 1755, 2004, 2464
AcvI	CACGTG	1 cut(s)	1895
AcyI	GRCGYC	4 cut(s)	374, 452, 588, 825
AdeI	CACNNNGTG	1 cut(s)	126
AfaI	GTAC	6 cut(s)	62, 1139, 1452, 2367, 2645, 2649
AflIII	ACRYGT	1 cut(s)	1892
AjiI	CACGTC	1 cut(s)	2133
AjnI	CCWGG	5 cut(s)	736, 1123, 1456, 1941, 2442
AleI	CACNNNNGTG	1 cut(s)	1253
Alw21I	GWGCWC	4 cut(s)	225, 573, 2403, 2611
Alw26I	GTCTC	5 cut(s)	400, 431, 1857, 2379, 2517
AlwI	GGATC	6 cut(s)	284, 718, 946, 959, 1478, 1576
AlwNI	CAGNNNCTG	1 cut(s)	2515
Ama87I	CYCGRG	4 cut(s)	94, 108, 2604, 2610
Aor13HI	TCCGGA	1 cut(s)	1327
AoxI	GGCC	7 cut(s)	693, 726, 1031, 1267, 1308, 1699, 2301
ApaI	GGGCCC	1 cut(s)	2305
ApoI	RAATTY	4 cut(s)	509, 1517, 2105, 2549
ArsI	GACNNNNNNTTYG	6 cut(s)	325, 357, 442, 474, 2378, 2410
AseI	ATTAAT	1 cut(s)	2199
Asp700I	GAANNNNTTC	1 cut(s)	1619
AspLEI	GCGC	4 cut(s)	203, 590, 692, 2599
AspS9I	GGNCC	6 cut(s)	172, 726, 1699, 2301, 2302, 2656
AsuC2I	CCSGG	1 cut(s)	1514
AsuHPI	GGTGA	3 cut(s)	671, 1184, 2557
AvaI	CYCGRG	4 cut(s)	94, 108, 2604, 2610
AvaII	GGWCC	2 cut(s)	172, 2656
BaeGI	GKGCMC	5 cut(s)	131, 1016, 1325, 1477, 2305
BalI	TGGCCA	1 cut(s)	1310
BamHI	GGATCC	1 cut(s)	951
BanI	GGYRCC	2 cut(s)	587, 2370
BanII	GRGCYC	3 cut(s)	2043, 2305, 2611
BbrPI	CACGTG	1 cut(s)	1895
BbsI	GAAGAC	3 cut(s)	351, 450, 2309
Bbv12I	GWGCWC	4 cut(s)	225, 573, 2403, 2611
BbvCI	CCTCAGC	4 cut(s)	522, 1064, 1292, 2067
BccI	CCATC	6 cut(s)	245, 853, 1349, 1592, 1946, 2213
BceAI	ACGGC	3 cut(s)	227, 436, 2384
BciT130I	CCWGG	5 cut(s)	738, 1125, 1458, 1943, 2444
BciVI	GTATCC	1 cut(s)	1324
BclI	TGATCA	1 cut(s)	2290
BcnI	CCSGG	1 cut(s)	1514
BcoDI	GTCTC	5 cut(s)	400, 431, 1857, 2379, 2517
BfaI	CTAG	3 cut(s)	39, 1578, 1970
BfmI	CTRYAG	2 cut(s)	1637, 2013
BfoI	RGCGCY	1 cut(s)	591
BfuAI	ACCTGC	2 cut(s)	762, 1494
BfuI	GTATCC	1 cut(s)	1324
BglI	GCCNNNNNGGC	1 cut(s)	742
BlpI	GCTNAGC	1 cut(s)	1599
Bme1390I	CCNGG	6 cut(s)	738, 1125, 1458, 1514, 1943, 2444
Bme18I	GGWCC	2 cut(s)	172, 2656
BmeT110I	CYCGRG	4 cut(s)	94, 108, 2604, 2610
BmgBI	CACGTC	1 cut(s)	2133
BmgT120I	GGNCC	6 cut(s)	172, 726, 1699, 2301, 2302, 2656
BmiI	GGNNCC	7 cut(s)	114, 589, 727, 953, 2303, 2372, 2448
BmrFI	CCNGG	6 cut(s)	738, 1125, 1458, 1514, 1943, 2444
BmsI	GCATC	8 cut(s)	177, 212, 858, 1222, 1421, 1806, 1861, 2410
BoxI	GACNNNNGTC	1 cut(s)	2481
BpiI	GAAGAC	3 cut(s)	351, 450, 2309
BplI	GAGNNNNNCTC	4 cut(s)	2606, 2638, 2725, 2757
Bpu10I	CCTNAGC	4 cut(s)	522, 1064, 1292, 2067
Bpu1102I	GCTNAGC	1 cut(s)	1599
BpuEI	CTTGAG	3 cut(s)	537, 1715, 2645
BpuMI	CCSGG	1 cut(s)	1514
BsaAI	YACGTR	3 cut(s)	1895, 2539, 2647
BsaHI	GRCGYC	4 cut(s)	374, 452, 588, 825
BsaI	GGTCTC	1 cut(s)	400
BsaJI	CCNNGG	8 cut(s)	135, 282, 301, 467, 737, 1124, 2205, 2305
BsaWI	WCCGGW	8 cut(s)	148, 292, 367, 478, 593, 1151, 1327, 1859
BsaXI	ACNNNNNCTCC	4 cut(s)	791, 821, 871, 901
Bse118I	RCCGGY	4 cut(s)	197, 379, 547, 715
Bse1I	ACTGG	3 cut(s)	1083, 1841, 1848
Bse3DI	GCAATG	3 cut(s)	1246, 1442, 2092
BseAI	TCCGGA	1 cut(s)	1327
BseBI	CCWGG	5 cut(s)	738, 1125, 1458, 1943, 2444
BseDI	CCNNGG	8 cut(s)	135, 282, 301, 467, 737, 1124, 2205, 2305
BseGI	GGATG	8 cut(s)	417, 1100, 1412, 1876, 1921, 1938, 2567, 2674
BseMI	GCAATG	3 cut(s)	1246, 1442, 2092
BseNI	ACTGG	3 cut(s)	1083, 1841, 1848
BseRI	GAGGAG	4 cut(s)	167, 252, 1098, 1382
BseSI	GKGCMC	5 cut(s)	131, 1016, 1325, 1477, 2305
BseX3I	CGGCCG	1 cut(s)	1031
BseYI	CCCAGC	1 cut(s)	165
BsgI	GTGCAG	1 cut(s)	1337
Bsh1236I	CGCG	2 cut(s)	400, 692
Bsh1285I	CGRYCG	4 cut(s)	384, 582, 749, 1034
BshFI	GGCC	7 cut(s)	695, 728, 1033, 1269, 1310, 1701, 2303
BshNI	GGYRCC	2 cut(s)	587, 2370
BsiEI	CGRYCG	4 cut(s)	384, 582, 749, 1034
BsiHKAI	GWGCWC	4 cut(s)	225, 573, 2403, 2611
BsiHKCI	CYCGRG	4 cut(s)	94, 108, 2604, 2610
BsiWI	CGTACG	1 cut(s)	2647
BslFI	GGGAC	5 cut(s)	661, 1750, 2148, 2223, 2720
BsmAI	GTCTC	5 cut(s)	400, 431, 1857, 2379, 2517
BsmBI	CGTCTC	1 cut(s)	431
BsmFI	GGGAC	5 cut(s)	661, 1750, 2148, 2223, 2720
BsmI	GAATGC	2 cut(s)	1874, 2636
BsnI	GGCC	7 cut(s)	695, 728, 1033, 1269, 1310, 1701, 2303
Bso31I	GGTCTC	1 cut(s)	400
BsoBI	CYCGRG	4 cut(s)	94, 108, 2604, 2610
Bsp120I	GGGCCC	1 cut(s)	2301
Bsp13I	TCCGGA	1 cut(s)	1327
Bsp1407I	TGTACA	1 cut(s)	60
Bsp1720I	GCTNAGC	1 cut(s)	1599
Bsp19I	CCATGG	1 cut(s)	135
BspANI	GGCC	7 cut(s)	695, 728, 1033, 1269, 1310, 1701, 2303
BspEI	TCCGGA	1 cut(s)	1327
BspFNI	CGCG	2 cut(s)	400, 692
BspHI	TCATGA	3 cut(s)	1260, 1653, 1759
BspLI	GGNNCC	7 cut(s)	114, 589, 727, 953, 2303, 2372, 2448
BspMAI	CTGCAG	1 cut(s)	1641
BspMI	ACCTGC	2 cut(s)	762, 1494
BspPI	GGATC	6 cut(s)	284, 718, 946, 959, 1478, 1576
BspQI	GCTCTTC	3 cut(s)	155, 213, 1626
BspT107I	GGYRCC	2 cut(s)	587, 2370
BspTNI	GGTCTC	1 cut(s)	400
BsrDI	GCAATG	3 cut(s)	1246, 1442, 2092
BsrFI	RCCGGY	4 cut(s)	197, 379, 547, 715
BsrGI	TGTACA	1 cut(s)	60
BsrI	ACTGG	3 cut(s)	1083, 1841, 1848
BssAI	RCCGGY	4 cut(s)	197, 379, 547, 715
BssECI	CCNNGG	8 cut(s)	135, 282, 301, 467, 737, 1124, 2205, 2305
BssNI	GRCGYC	4 cut(s)	374, 452, 588, 825
BssT1I	CCWWGG	3 cut(s)	135, 282, 2205
Bst2UI	CCWGG	5 cut(s)	738, 1125, 1458, 1943, 2444
Bst4CI	ACNGT	1 cut(s)	2309
Bst6I	CTCTTC	8 cut(s)	28, 155, 213, 328, 736, 1528, 1626, 1710
BstACI	GRCGYC	4 cut(s)	374, 452, 588, 825
BstAPI	GCANNNNNTGC	2 cut(s)	774, 843
BstAUI	TGTACA	1 cut(s)	60
BstBAI	YACGTR	3 cut(s)	1895, 2539, 2647
BstDSI	CCRYGG	2 cut(s)	135, 2305
BstF5I	GGATG	8 cut(s)	417, 1100, 1412, 1876, 1921, 1938, 2567, 2674
BstFNI	CGCG	2 cut(s)	400, 692
BstH2I	RGCGCY	1 cut(s)	591
BstHHI	GCGC	4 cut(s)	203, 590, 692, 2599
BstMAI	GTCTC	5 cut(s)	400, 431, 1857, 2379, 2517
BstMCI	CGRYCG	4 cut(s)	384, 582, 749, 1034
BstMWI	GCNNNNNNNGC	7 cut(s)	481, 742, 774, 843, 1600, 2525, 2615
BstNI	CCWGG	5 cut(s)	738, 1125, 1458, 1943, 2444
BstPAI	GACNNNNGTC	1 cut(s)	2481
BstSCI	CCNGG	6 cut(s)	736, 1123, 1456, 1512, 1941, 2442
BstSFI	CTRYAG	2 cut(s)	1637, 2013
BstSLI	GKGCMC	5 cut(s)	131, 1016, 1325, 1477, 2305
BstSNI	TACGTA	1 cut(s)	2647
BstUI	CGCG	2 cut(s)	400, 692
BstV2I	GAAGAC	3 cut(s)	351, 450, 2309
BstX2I	RGATCY	3 cut(s)	951, 1483, 1568
BstXI	CCANNNNNNTGG	1 cut(s)	2312
BstYI	RGATCY	3 cut(s)	951, 1483, 1568
BstZI	CGGCCG	1 cut(s)	1031
BsuI	GTATCC	1 cut(s)	1324
BsuRI	GGCC	7 cut(s)	695, 728, 1033, 1269, 1310, 1701, 2303
BtgI	CCRYGG	2 cut(s)	135, 2305
BtgZI	GCGATG	2 cut(s)	223, 872
BtrI	CACGTC	1 cut(s)	2133
BtsCI	GGATG	8 cut(s)	417, 1100, 1412, 1876, 1921, 1938, 2567, 2674
BtsI	GCAGTG	3 cut(s)	1325, 1799, 2265
BtsIMutI	CAGTG	3 cut(s)	1325, 1799, 2265
BveI	ACCTGC	2 cut(s)	762, 1494
CaiI	CAGNNNCTG	1 cut(s)	2515
CciI	TCATGA	3 cut(s)	1260, 1653, 1759
CfoI	GCGC	4 cut(s)	203, 590, 692, 2599
Cfr10I	RCCGGY	4 cut(s)	197, 379, 547, 715
Cfr13I	GGNCC	6 cut(s)	172, 726, 1699, 2301, 2302, 2656
CseI	GACGC	4 cut(s)	363, 481, 833, 2483
CsiI	ACCWGGT	2 cut(s)	1456, 2442
Csp6I	GTAC	6 cut(s)	61, 1138, 1451, 2366, 2644, 2648
CviAII	CATG	6 cut(s)	136, 1261, 1654, 1760, 1852, 2498
CviQI	GTAC	6 cut(s)	61, 1138, 1451, 2366, 2644, 2648
DinI	GGCGCC	1 cut(s)	589
DraIII	CACNNNGTG	1 cut(s)	126
EaeI	YGGCCR	4 cut(s)	693, 1031, 1267, 1308
EagI	CGGCCG	1 cut(s)	1031
Eam1104I	CTCTTC	8 cut(s)	28, 155, 213, 328, 736, 1528, 1626, 1710
EarI	CTCTTC	8 cut(s)	28, 155, 213, 328, 736, 1528, 1626, 1710
Ecl136II	GAGCTC	1 cut(s)	2609
EclXI	CGGCCG	1 cut(s)	1031
Eco105I	TACGTA	1 cut(s)	2647
Eco130I	CCWWGG	3 cut(s)	135, 282, 2205
Eco24I	GRGCYC	3 cut(s)	2043, 2305, 2611
Eco31I	GGTCTC	1 cut(s)	400
Eco32I	GATATC	2 cut(s)	1743, 1849
Eco47I	GGWCC	2 cut(s)	172, 2656
Eco52I	CGGCCG	1 cut(s)	1031
Eco53kI	GAGCTC	1 cut(s)	2609
Eco57I	CTGAAG	4 cut(s)	872, 1755, 2004, 2464
Eco72I	CACGTG	1 cut(s)	1895
Eco88I	CYCGRG	4 cut(s)	94, 108, 2604, 2610
EcoICRI	GAGCTC	1 cut(s)	2609
EcoO109I	RGGNCCY	3 cut(s)	172, 726, 2656
EcoRI	GAATTC	1 cut(s)	1517
EcoRII	CCWGG	5 cut(s)	736, 1123, 1456, 1941, 2442
EcoRV	GATATC	2 cut(s)	1743, 1849
EcoT14I	CCWWGG	3 cut(s)	135, 282, 2205
EcoT22I	ATGCAT	1 cut(s)	1876
EcoT38I	GRGCYC	3 cut(s)	2043, 2305, 2611
EgeI	GGCGCC	1 cut(s)	589
EheI	GGCGCC	1 cut(s)	589
ErhI	CCWWGG	3 cut(s)	135, 282, 2205
Esp3I	CGTCTC	1 cut(s)	431
FaeI	CATG	6 cut(s)	139, 1264, 1657, 1763, 1855, 2501
FaqI	GGGAC	5 cut(s)	661, 1750, 2148, 2223, 2720
FatI	CATG	6 cut(s)	135, 1260, 1653, 1759, 1851, 2497
FauI	CCCGC	5 cut(s)	139, 285, 687, 770, 1024
FauNDI	CATATG	1 cut(s)	2746
FbaI	TGATCA	1 cut(s)	2290
FokI	GGATG	8 cut(s)	424, 1107, 1399, 1883, 1925, 1928, 2554, 2681
FriOI	GRGCYC	3 cut(s)	2043, 2305, 2611
FspBI	CTAG	3 cut(s)	39, 1578, 1970
GlaI	GCGC	4 cut(s)	202, 589, 691, 2598
GsaI	CCCAGC	1 cut(s)	169
HaeII	RGCGCY	1 cut(s)	591
HaeIII	GGCC	7 cut(s)	695, 728, 1033, 1269, 1310, 1701, 2303
HgaI	GACGC	4 cut(s)	363, 481, 833, 2483
HhaI	GCGC	4 cut(s)	203, 590, 692, 2599
Hin1I	GRCGYC	4 cut(s)	374, 452, 588, 825
Hin1II	CATG	6 cut(s)	139, 1264, 1657, 1763, 1855, 2501
Hin6I	GCGC	4 cut(s)	201, 588, 690, 2597
HinP1I	GCGC	4 cut(s)	201, 588, 690, 2597
HincII	GTYRAC	4 cut(s)	9, 298, 1728, 2629
HindII	GTYRAC	4 cut(s)	9, 298, 1728, 2629
HpaI	GTTAAC	1 cut(s)	298
HphI	GGTGA	3 cut(s)	671, 1184, 2557
Hpy166II	GTNNAC	5 cut(s)	9, 298, 1623, 1728, 2629
Hpy8I	GTNNAC	5 cut(s)	9, 298, 1623, 1728, 2629
Hpy99I	CGWCG	6 cut(s)	218, 248, 379, 454, 457, 827
HpyCH4III	ACNGT	1 cut(s)	2309
HpyCH4IV	ACGT	7 cut(s)	5, 452, 1708, 1894, 2132, 2538, 2646
HpyF10VI	GCNNNNNNNGC	7 cut(s)	481, 742, 774, 843, 1600, 2525, 2615
HpySE526I	ACGT	7 cut(s)	5, 452, 1708, 1894, 2132, 2538, 2646
Hsp92I	GRCGYC	4 cut(s)	374, 452, 588, 825
Hsp92II	CATG	6 cut(s)	139, 1264, 1657, 1763, 1855, 2501
HspAI	GCGC	4 cut(s)	201, 588, 690, 2597
KasI	GGCGCC	1 cut(s)	587
Kpn2I	TCCGGA	1 cut(s)	1327
KroI	GCCGGC	2 cut(s)	197, 547
KroNI	GCCGGC	2 cut(s)	199, 549
Ksp22I	TGATCA	1 cut(s)	2290
KspAI	GTTAAC	1 cut(s)	298
LguI	GCTCTTC	3 cut(s)	155, 213, 1626
LmnI	GCTCC	5 cut(s)	481, 518, 568, 1036, 1909
LweI	GCATC	8 cut(s)	177, 212, 858, 1222, 1421, 1806, 1861, 2410
MabI	ACCWGGT	2 cut(s)	1456, 2442
MaeI	CTAG	3 cut(s)	39, 1578, 1970
MaeII	ACGT	7 cut(s)	5, 452, 1708, 1894, 2132, 2538, 2646
MaeIII	GTNAC	6 cut(s)	331, 616, 1839, 2027, 2074, 2282
MfeI	CAATTG	1 cut(s)	841
MflI	RGATCY	3 cut(s)	951, 1483, 1568
MlsI	TGGCCA	1 cut(s)	1310
MluNI	TGGCCA	1 cut(s)	1310
Mly113I	GGCGCC	1 cut(s)	588
MlyI	GAGTC	6 cut(s)	457, 551, 665, 926, 1772, 2705
MmeI	TCCRAC	2 cut(s)	389, 486
Mox20I	TGGCCA	1 cut(s)	1310
Mph1103I	ATGCAT	1 cut(s)	1876
MroI	TCCGGA	1 cut(s)	1327
MroNI	GCCGGC	2 cut(s)	197, 547
MroXI	GAANNNNTTC	1 cut(s)	1619
MscI	TGGCCA	1 cut(s)	1310
MseI	TTAA	4 cut(s)	297, 1389, 2199, 2490
MslI	CAYNNNNRTG	3 cut(s)	1253, 2310, 2729
Msp20I	TGGCCA	1 cut(s)	1310
MspA1I	CMGCKG	1 cut(s)	338
MspR9I	CCNGG	6 cut(s)	738, 1125, 1458, 1514, 1943, 2444
MunI	CAATTG	1 cut(s)	841
Mva1269I	GAATGC	2 cut(s)	1874, 2636
MvaI	CCWGG	5 cut(s)	738, 1125, 1458, 1943, 2444
MvnI	CGCG	2 cut(s)	400, 692
MwoI	GCNNNNNNNGC	7 cut(s)	481, 742, 774, 843, 1600, 2525, 2615
NaeI	GCCGGC	2 cut(s)	199, 549
NarI	GGCGCC	1 cut(s)	588
NciI	CCSGG	1 cut(s)	1514
NcoI	CCATGG	1 cut(s)	135
NdeI	CATATG	1 cut(s)	2746
NgoMIV	GCCGGC	2 cut(s)	197, 547
NlaIII	CATG	6 cut(s)	139, 1264, 1657, 1763, 1855, 2501
NlaIV	GGNNCC	7 cut(s)	114, 589, 727, 953, 2303, 2372, 2448
NmeAIII	GCCGAG	3 cut(s)	282, 1295, 1727
NmuCI	GTSAC	3 cut(s)	331, 616, 2282
NsiI	ATGCAT	1 cut(s)	1876
OliI	CACNNNNGTG	1 cut(s)	1253
PaeR7I	CTCGAG	1 cut(s)	94
PagI	TCATGA	3 cut(s)	1260, 1653, 1759
PaqCI	CACCTGC	1 cut(s)	762
PciSI	GCTCTTC	3 cut(s)	155, 213, 1626
PcsI	WCGNNNNNNNCGW	2 cut(s)	446, 458
PctI	GAATGC	2 cut(s)	1874, 2636
PdiI	GCCGGC	2 cut(s)	199, 549
PdmI	GAANNNNTTC	1 cut(s)	1619
PfeI	GAWTC	7 cut(s)	364, 638, 982, 1148, 1222, 1657, 1931
Pfl23II	CGTACG	1 cut(s)	2647
PflFI	GACNNNGTC	1 cut(s)	454
PfoI	TCCNGGA	2 cut(s)	1512, 1941
Ple19I	CGATCG	2 cut(s)	582, 749
PleI	GAGTC	6 cut(s)	457, 551, 665, 925, 1771, 2705
PluTI	GGCGCC	1 cut(s)	591
PmaCI	CACGTG	1 cut(s)	1895
PmlI	CACGTG	1 cut(s)	1895
PpsI	GAGTC	6 cut(s)	457, 551, 665, 925, 1771, 2705
Ppu21I	YACGTR	3 cut(s)	1895, 2539, 2647
PpuMI	RGGWCCY	2 cut(s)	172, 2656
PshAI	GACNNNNGTC	1 cut(s)	2481
PshBI	ATTAAT	1 cut(s)	2199
Psp124BI	GAGCTC	1 cut(s)	2611
Psp1406I	AACGTT	1 cut(s)	1708
Psp5II	RGGWCCY	2 cut(s)	172, 2656
Psp6I	CCWGG	5 cut(s)	736, 1123, 1456, 1941, 2442
PspCI	CACGTG	1 cut(s)	1895
PspFI	CCCAGC	1 cut(s)	165
PspGI	CCWGG	5 cut(s)	736, 1123, 1456, 1941, 2442
PspLI	CGTACG	1 cut(s)	2647
PspN4I	GGNNCC	7 cut(s)	114, 589, 727, 953, 2303, 2372, 2448
PspOMI	GGGCCC	1 cut(s)	2301
PspPI	GGNCC	6 cut(s)	172, 726, 1699, 2301, 2302, 2656
PspPPI	RGGWCCY	2 cut(s)	172, 2656
PstI	CTGCAG	1 cut(s)	1641
PstNI	CAGNNNCTG	1 cut(s)	2515
PsuI	RGATCY	3 cut(s)	951, 1483, 1568
PsyI	GACNNNGTC	1 cut(s)	454
PvuI	CGATCG	2 cut(s)	582, 749
RsaI	GTAC	6 cut(s)	62, 1139, 1452, 2367, 2645, 2649
RsaNI	GTAC	6 cut(s)	61, 1138, 1451, 2366, 2644, 2648
RseI	CAYNNNNRTG	3 cut(s)	1253, 2310, 2729
SacI	GAGCTC	1 cut(s)	2611
SapI	GCTCTTC	3 cut(s)	155, 213, 1626
SaqAI	TTAA	4 cut(s)	297, 1389, 2199, 2490
Sau96I	GGNCC	6 cut(s)	172, 726, 1699, 2301, 2302, 2656
SchI	GAGTC	6 cut(s)	457, 551, 665, 926, 1772, 2705
ScrFI	CCNGG	6 cut(s)	738, 1125, 1458, 1514, 1943, 2444
SexAI	ACCWGGT	2 cut(s)	1456, 2442
SfaNI	GCATC	8 cut(s)	177, 212, 858, 1222, 1421, 1806, 1861, 2410
SfcI	CTRYAG	2 cut(s)	1637, 2013
SfoI	GGCGCC	1 cut(s)	589
Sfr274I	CTCGAG	1 cut(s)	94
SinI	GGWCC	2 cut(s)	172, 2656
SlaI	CTCGAG	1 cut(s)	94
SmiMI	CAYNNNNRTG	3 cut(s)	1253, 2310, 2729
SmlI	CTYRAG	4 cut(s)	94, 552, 1694, 2660
SmoI	CTYRAG	4 cut(s)	94, 552, 1694, 2660
SnaBI	TACGTA	1 cut(s)	2647
SspDI	GGCGCC	1 cut(s)	587
SspI	AATATT	1 cut(s)	1997
SspMI	CTAG	3 cut(s)	39, 1578, 1970
SstI	GAGCTC	1 cut(s)	2611
StyD4I	CCNGG	6 cut(s)	736, 1123, 1456, 1512, 1941, 2442
StyI	CCWWGG	3 cut(s)	135, 282, 2205
TaaI	ACNGT	1 cut(s)	2309
TaiI	ACGT	7 cut(s)	8, 455, 1711, 1897, 2135, 2541, 2649
TaqII	GACCGA	1 cut(s)	374
TatI	WGTACW	1 cut(s)	60
TauI	GCSGC	5 cut(s)	426, 588, 611, 695, 2580
TfiI	GAWTC	7 cut(s)	364, 638, 982, 1148, 1222, 1657, 1931
Tru1I	TTAA	4 cut(s)	297, 1389, 2199, 2490
Tru9I	TTAA	4 cut(s)	297, 1389, 2199, 2490
TscAI	CASTG	3 cut(s)	1325, 1799, 2265
TseFI	GTSAC	3 cut(s)	331, 616, 2282
Tsp45I	GTSAC	3 cut(s)	331, 616, 2282
TspGWI	ACGGA	5 cut(s)	319, 1745, 2382, 2439, 2741
TspRI	CASTG	3 cut(s)	1325, 1799, 2265
Tth111I	GACNNNGTC	1 cut(s)	454
VpaK11BI	GGWCC	2 cut(s)	172, 2656
VspI	ATTAAT	1 cut(s)	2199
XapI	RAATTY	4 cut(s)	509, 1517, 2105, 2549
XcmI	CCANNNNNNNNNTGG	1 cut(s)	703
XhoI	CTCGAG	1 cut(s)	94
XmnI	GAANNNNTTC	1 cut(s)	1619
XspI	CTAG	3 cut(s)	39, 1578, 1970
ZraI	GACGTC	1 cut(s)	453
Zsp2I	ATGCAT	1 cut(s)	1876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.