Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003471

Physical Location & Seq

Genomic Coordinates Forward (+)

641687 .. 646556

Gene Structure 4870 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG010000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGGCGGCTCCGGAACCCGAGGACGAGAAAAGCTGGCAGGAGCTACTCAGAAAGATGCTGCCTTCCGGCGCGCCGTTGCCGGACGACGACCATCTCGACTACTCCATCGCAGTTGAGTACGAAGGCCCTCCGCTGCCCTACGAAGTCCCCAAGGTTGATCCAGTCGACATCGACTCGCTTCACACCGCTGCTTCCGGTTCGGTTTCGGAGCTTTCTTCGATTCCGGTGGCCGAGCCGGTCGATCGGGACGCCTCTCGGTTCAGCCGGATCAGGAACGGCGACGCCGCAAACGAAACGCAGACTTCGACGTCGTTTTCGGTAGGTTTCAGCTCTGAATTTTCAGCTCAGGACTCGAACTCGGAGCCGAAACCGGTCGAGGACGACGCCGGAGGAGGAGGAGGAGGAAAGAGAGCGGCGGTCGTGACTTTCAACACGCCGAGAGAATCGGAGACGGAAGACGACGGCGACCGGTCCTCGTCGCCGCAATCGGAGCCGGTGGGATCGCCGGTTGCTTGGGCCTCGCCGCTGAAGGTAGCGAGTAAGAGAGGGATTTGCAGCAGGTGTGGAAAAGGGAACAGATTGAAGGAGAGGGAGTGGTGCTTGGTGTGTGACTCAAAGTACTGTAGCAACTGTTTGCTTAAAGCTATGGGATCAATGCCGGAGGGGCGAAAATGTGTGAGCTGCATTGGGCAGCCTATAGATGAGTCCAAGAGGGCTAGTTTGGGCAAGTGTTCAAAGCTTCTTTCTAGGGTTTGTAGTCCTTTGGAGATTGGGCAGATAATGAGGGCCGAGAAGGAGTGTCCGGCCAATCAGCTCCGGCCGCAGCAGTTGGTTGTGAATGGGAGGGAGTTGAGGGAAGAAGAGCTGGGTGAGATTTTGGGATGTGAAGTACCTCCTCAGAAGTTGAAGCCTGGGAGGTACTGGTACGATAAGGATTCGGGCCTCTGGGGAAAGGAGGGAGAGAAGCCTGATTGTATGATTACTCCGAAACTGAATGTTGGGGGTAAGCTTCGGGCTGATGCCAGCAATGGGAACACTAATGTATTCATGAATGGCAGAGAGATCACAAAGATTGAGCTTAGGGTGCTCAAGCTGGCCAAAGTGCAGTGCCCTCCAGATACTCATTTCTGGGTGTATGAAGATGGTACATATGAGGAGGAAGGGCAGAATAACATTAAAGGAAACATATGGGGAAAGGCATCCACCCGTTTCATTTGTTCATTATTCTCATTGCCTGTACCATCTCGTAATCAAAATGGGGCAAGAGAAGATCCTATGACACAACCTTCAAGTAGGTCCATCCCTGAATACTTGGATCAGGCAAGAGTTCAAAAACTTTTGTTATTTGGTCTGGAGGGATCTGGAACTAGCACCATCTTCAAGCAGGCCAAGTTCTTATATGGGAACGAGTTCACTCCCGAGGAGATGCAGAACATGAAGCTCATGATTCAAAGCAATATGTACAAGTACTTAAGTATATTACTTGAGGGCCGAGAACGTTTTGAAGAGGAAGCTTCATTGCAGAATACTTCTGATTCCTTGGCCACTGACGAGACGCCATCAGTAGTCGATGAAAGTAAGCAATGCATCTATTCTATCAACCAAAGATTCAAGCACTTTTCTGACTGGTTGCTGGATATCATGGCAACCGGAGACTTGGATGCATTCTTCCCTGCTGCTACACGTGAGTATGCTCCTATTGTAGATGAAGTATGGAAAGATTCTGCCATCCAGGAAACATACAAAAGAAGGGAGGAATTACATTGTCTTCCAGAAGTTGCCAAGTATTTCTTAGATCGGGTTAGTTATTCCTTGTTTTGGCCCCACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04015 ko04022 ko04024 ko04062 ko04071 ko04261 ko04360 ko04371 ko04540 ko04611 ko04670 ko04713 ko04723 ko04724 ko04725 ko04726 ko04727 ko04728 ko04730 ko04914 ko04915 ko04916 ko04921 ko04923 ko04924 ko04926 ko04934 ko04971 ko05012 ko05030 ko05032 ko05034 ko05133 ko05142 ko05145 ko05200 map04015 map04022 map04024 map04062 map04071 map04261 map04360 map04371 map04540 map04611 map04670 map04713 map04723 map04724 map04725 map04726 map04727 map04728 map04730 map04914 map04915 map04916 map04921 map04923 map04924 map04926 map04934 map04971 map05012 map05030 map05032 map05034 map05133 map05142 map05145 map05200

Pfam Domains

Protein Families

G-alpha

Protein Analysis

610

Amino Acids

67.99

Weight (kDa)

5.02

Isoelectric Point (pI)

48.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-alpha	PF00503	441 - 601	7.4e-25	G-protein alpha subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003471)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17740 FvH4_5g17740
malus_domestica	MD06G1232900.v1.1 MD14G1239900.v1.1
prunus_persica	Prupe.5G237500_v2.0.a1 Prupe.5G237500_v2.0.a1
pyrus_communis	pycom06g20790 pycom14g20150
rosa_chinensis	RchiOBHm_Chr5g0016271 RchiOBHm_Chr7g0177881
rosa_laevigata	RLG00000003463 RLG00000005494 RLG00000019305 RLG00000035269
rosa_multiflora	Rmu_sc0000141.1_g000001 Rmu_sc0004510.1_g000005 Rmu_sc0006214.1_g000003 Rmu_sc0006997.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129380 Rroxscaffold_3G00275470
rosa_rugosa	Rorug04G0425800 Rorug06G0410700 Rorug06G0410800
rosa_samantha	Rh1CG219000 Rh4CG242300 Rh5AG324200 Rh5CG136200 Rh7AG009900 Rh7AG127600 Rh7BG010000 Rh7BG128600 Rh7BG129500 Rh7CG130400 Rh7CG131800 Rh7DG010000
rosa_wichuraiana	Rw7G000830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	549
AasI	GACNNNNNNGTC	1 cut(s)	307
AatII	GACGTC	1 cut(s)	311
Acc36I	ACCTGC	1 cut(s)	549
AccBSI	CCGCTC	1 cut(s)	413
AccI	GTMKAC	1 cut(s)	165
AccII	CGCG	1 cut(s)	71
AccIII	TCCGGA	1 cut(s)	10
AciI	CCGC	9 cut(s)	5, 131, 186, 285, 413, 416, 482, 524, 821
AclI	AACGTT	1 cut(s)	1498
AclWI	GGATC	7 cut(s)	152, 275, 508, 658, 1265, 1323, 1366
AcoI	YGGCCR	5 cut(s)	228, 804, 818, 1095, 1542
AcsI	RAATTY	1 cut(s)	335
AcuI	CTGAAG	1 cut(s)	548
AcvI	CACGTG	1 cut(s)	1685
AcyI	GRCGYC	5 cut(s)	249, 282, 308, 384, 1556
AfaI	GTAC	9 cut(s)	119, 620, 891, 920, 926, 1147, 1239, 1463, 1469
AfiI	CCNNNNNNNGG	2 cut(s)	1029, 1818
AflII	CTTAAG	1 cut(s)	1471
AflIII	ACRYGT	1 cut(s)	1682
AgeI	ACCGGT	2 cut(s)	370, 468
AjnI	CCWGG	2 cut(s)	910, 1731
Alw21I	GWGCWC	1 cut(s)	1089
Alw26I	GTCTC	3 cut(s)	443, 1547, 1647
AlwI	GGATC	7 cut(s)	152, 275, 508, 658, 1265, 1323, 1366
Ama87I	CYCGRG	2 cut(s)	17, 1418
Aor13HI	TCCGGA	1 cut(s)	10
ApeKI	GCWGC	8 cut(s)	58, 133, 188, 555, 681, 691, 823, 1676
ApoI	RAATTY	1 cut(s)	335
ArsI	GACNNNNNNTTYG	2 cut(s)	298, 330
AscI	GGCGCGCC	1 cut(s)	69
AsiGI	ACCGGT	2 cut(s)	370, 468
Asp700I	GAANNNNTTC	1 cut(s)	1409
AspLEI	GCGC	2 cut(s)	71, 73
AspS9I	GGNCC	8 cut(s)	125, 471, 516, 786, 940, 1296, 1489, 1821
AsuHPI	GGTGA	1 cut(s)	881
AvaI	CYCGRG	2 cut(s)	17, 1418
AvaII	GGWCC	2 cut(s)	471, 1296
BaeGI	GKGCMC	1 cut(s)	1112
BalI	TGGCCA	2 cut(s)	1097, 1544
BbrPI	CACGTG	1 cut(s)	1685
BbsI	GAAGAC	2 cut(s)	462, 1760
Bbv12I	GWGCWC	1 cut(s)	1089
BbvI	GCAGC	8 cut(s)	45, 120, 175, 567, 668, 703, 835, 1663
BccI	CCATC	8 cut(s)	99, 113, 1136, 1249, 1307, 1382, 1567, 1736
BceAI	ACGGC	3 cut(s)	58, 292, 478
BciT130I	CCWGG	2 cut(s)	912, 1733
BcoDI	GTCTC	3 cut(s)	443, 1547, 1647
BfaI	CTAG	3 cut(s)	717, 747, 1368
BfmI	CTRYAG	2 cut(s)	622, 696
BfrI	CTTAAG	1 cut(s)	1471
BfuAI	ACCTGC	1 cut(s)	549
BglI	GCCNNNNNGGC	1 cut(s)	664
BmcAI	AGTACT	2 cut(s)	620, 1469
Bme1390I	CCNGG	2 cut(s)	912, 1733
Bme18I	GGWCC	2 cut(s)	471, 1296
BmeT110I	CYCGRG	2 cut(s)	17, 1418
BmgT120I	GGNCC	8 cut(s)	125, 471, 516, 786, 940, 1296, 1489, 1821
BmiI	GGNNCC	5 cut(s)	9, 15, 363, 492, 1823
BmrFI	CCNGG	2 cut(s)	912, 1733
BmsI	GCATC	6 cut(s)	45, 1009, 1208, 1416, 1596, 1651
BpiI	GAAGAC	2 cut(s)	462, 1760
BpmI	CTGGAG	2 cut(s)	1098, 1373
Bpu10I	CCTNAGC	2 cut(s)	345, 1079
BpuEI	CTTGAG	2 cut(s)	1073, 1505
BsaAI	YACGTR	1 cut(s)	1685
BsaHI	GRCGYC	5 cut(s)	249, 282, 308, 384, 1556
BsaJI	CCNNGG	5 cut(s)	18, 150, 911, 1419, 1539
BsaWI	WCCGGW	6 cut(s)	10, 194, 223, 370, 468, 1649
BsaXI	ACNNNNNCTCC	2 cut(s)	578, 608
Bsc4I	CCNNNNNNNGG	2 cut(s)	1029, 1818
Bse118I	RCCGGY	5 cut(s)	235, 370, 468, 493, 505
Bse1I	ACTGG	3 cut(s)	161, 926, 1631
Bse3DI	GCAATG	4 cut(s)	1033, 1229, 1517, 1589
BseAI	TCCGGA	1 cut(s)	10
BseBI	CCWGG	2 cut(s)	912, 1733
BseDI	CCNNGG	5 cut(s)	18, 150, 911, 1419, 1539
BseGI	GGATG	5 cut(s)	887, 1199, 1299, 1666, 1728
BseLI	CCNNNNNNNGG	2 cut(s)	1029, 1818
BseMI	GCAATG	4 cut(s)	1033, 1229, 1517, 1589
BseMII	CTCAG	3 cut(s)	61, 359, 911
BseNI	ACTGG	3 cut(s)	161, 926, 1631
BsePI	GCGCGC	1 cut(s)	69
BseRI	GAGGAG	7 cut(s)	405, 408, 411, 414, 885, 1169, 1436
BseSI	GKGCMC	1 cut(s)	1112
BseX3I	CGGCCG	1 cut(s)	818
BseXI	GCAGC	8 cut(s)	45, 120, 175, 567, 668, 703, 835, 1663
BseYI	CCCAGC	1 cut(s)	865
BsgI	GTGCAG	1 cut(s)	1124
Bsh1236I	CGCG	1 cut(s)	71
Bsh1285I	CGRYCG	6 cut(s)	240, 244, 375, 420, 469, 821
BshTI	ACCGGT	2 cut(s)	370, 468
BsiEI	CGRYCG	6 cut(s)	240, 244, 375, 420, 469, 821
BsiHKAI	GWGCWC	1 cut(s)	1089
BsiHKCI	CYCGRG	2 cut(s)	17, 1418
BslFI	GGGAC	2 cut(s)	131, 260
BslI	CCNNNNNNNGG	2 cut(s)	1029, 1818
BsmAI	GTCTC	3 cut(s)	443, 1547, 1647
BsmBI	CGTCTC	2 cut(s)	443, 1547
BsmFI	GGGAC	2 cut(s)	131, 260
BsmI	GAATGC	1 cut(s)	1664
BsoBI	CYCGRG	2 cut(s)	17, 1418
Bsp1286I	GDGCHC	2 cut(s)	1089, 1112
Bsp13I	TCCGGA	1 cut(s)	10
Bsp1407I	TGTACA	1 cut(s)	1461
BspACI	CCGC	9 cut(s)	5, 131, 186, 285, 413, 416, 482, 524, 821
BspCNI	CTCAG	3 cut(s)	60, 358, 910
BspEI	TCCGGA	1 cut(s)	10
BspFNI	CGCG	1 cut(s)	71
BspHI	TCATGA	2 cut(s)	1047, 1443
BspLI	GGNNCC	5 cut(s)	9, 15, 363, 492, 1823
BspMI	ACCTGC	1 cut(s)	549
BspPI	GGATC	7 cut(s)	152, 275, 508, 658, 1265, 1323, 1366
BspQI	GCTCTTC	1 cut(s)	855
BspTI	CTTAAG	1 cut(s)	1471
BsrBI	CCGCTC	1 cut(s)	413
BsrDI	GCAATG	4 cut(s)	1033, 1229, 1517, 1589
BsrFI	RCCGGY	5 cut(s)	235, 370, 468, 493, 505
BsrGI	TGTACA	1 cut(s)	1461
BsrI	ACTGG	3 cut(s)	161, 926, 1631
BssAI	RCCGGY	5 cut(s)	235, 370, 468, 493, 505
BssECI	CCNNGG	5 cut(s)	18, 150, 911, 1419, 1539
BssHII	GCGCGC	1 cut(s)	69
BssNI	GRCGYC	5 cut(s)	249, 282, 308, 384, 1556
BssT1I	CCWWGG	2 cut(s)	150, 1539
Bst2UI	CCWGG	2 cut(s)	912, 1733
Bst4CI	ACNGT	2 cut(s)	623, 632
Bst6I	CTCTTC	2 cut(s)	855, 1500
BstACI	GRCGYC	5 cut(s)	249, 282, 308, 384, 1556
BstAFI	CTTAAG	1 cut(s)	1471
BstAUI	TGTACA	1 cut(s)	1461
BstBAI	YACGTR	1 cut(s)	1685
BstC8I	GCNNGC	5 cut(s)	35, 71, 1024, 1095, 1386
BstDEI	CTNAG	5 cut(s)	47, 345, 897, 1079, 1792
BstF5I	GGATG	5 cut(s)	887, 1199, 1299, 1666, 1728
BstFNI	CGCG	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	71, 73
BstMAI	GTCTC	3 cut(s)	443, 1547, 1647
BstMCI	CGRYCG	6 cut(s)	240, 244, 375, 420, 469, 821
BstMWI	GCNNNNNNNGC	4 cut(s)	490, 664, 820, 1084
BstNI	CCWGG	2 cut(s)	912, 1733
BstSCI	CCNGG	2 cut(s)	910, 1731
BstSFI	CTRYAG	2 cut(s)	622, 696
BstSLI	GKGCMC	1 cut(s)	1112
BstUI	CGCG	1 cut(s)	71
BstV1I	GCAGC	8 cut(s)	45, 120, 175, 567, 668, 703, 835, 1663
BstV2I	GAAGAC	2 cut(s)	462, 1760
BstX2I	RGATCY	2 cut(s)	1270, 1358
BstYI	RGATCY	2 cut(s)	1270, 1358
BstZI	CGGCCG	1 cut(s)	818
BtgZI	GCGATG	1 cut(s)	91
BtsCI	GGATG	5 cut(s)	887, 1199, 1299, 1666, 1728
BtsI	GCAGTG	1 cut(s)	1112
BtsIMutI	CAGTG	2 cut(s)	1112, 1545
BveI	ACCTGC	1 cut(s)	549
Cac8I	GCNNGC	5 cut(s)	35, 71, 1024, 1095, 1386
CciI	TCATGA	2 cut(s)	1047, 1443
CfoI	GCGC	2 cut(s)	71, 73
Cfr10I	RCCGGY	5 cut(s)	235, 370, 468, 493, 505
Cfr13I	GGNCC	8 cut(s)	125, 471, 516, 786, 940, 1296, 1489, 1821
CseI	GACGC	4 cut(s)	257, 290, 392, 1564
Csp6I	GTAC	9 cut(s)	118, 619, 890, 919, 925, 1146, 1238, 1462, 1468
CspAI	ACCGGT	2 cut(s)	370, 468
CviAII	CATG	4 cut(s)	1048, 1435, 1444, 1642
CviQI	GTAC	9 cut(s)	118, 619, 890, 919, 925, 1146, 1238, 1462, 1468
DdeI	CTNAG	5 cut(s)	47, 345, 897, 1079, 1792
DrdI	GACNNNNNNGTC	1 cut(s)	307
DseDI	GACNNNNNNGTC	1 cut(s)	307
EaeI	YGGCCR	5 cut(s)	228, 804, 818, 1095, 1542
EagI	CGGCCG	1 cut(s)	818
Eam1104I	CTCTTC	2 cut(s)	855, 1500
EarI	CTCTTC	2 cut(s)	855, 1500
EclXI	CGGCCG	1 cut(s)	818
Eco130I	CCWWGG	2 cut(s)	150, 1539
Eco32I	GATATC	1 cut(s)	1639
Eco47I	GGWCC	2 cut(s)	471, 1296
Eco52I	CGGCCG	1 cut(s)	818
Eco57I	CTGAAG	1 cut(s)	548
Eco72I	CACGTG	1 cut(s)	1685
Eco88I	CYCGRG	2 cut(s)	17, 1418
EcoO109I	RGGNCCY	1 cut(s)	125
EcoRII	CCWGG	2 cut(s)	910, 1731
EcoRV	GATATC	1 cut(s)	1639
EcoT14I	CCWWGG	2 cut(s)	150, 1539
EcoT22I	ATGCAT	2 cut(s)	1589, 1666
ErhI	CCWWGG	2 cut(s)	150, 1539
Esp3I	CGTCTC	2 cut(s)	443, 1547
FaeI	CATG	4 cut(s)	1051, 1438, 1447, 1645
FalI	AAGNNNNNCTT	2 cut(s)	1775, 1807
FaqI	GGGAC	2 cut(s)	131, 260
FatI	CATG	4 cut(s)	1047, 1434, 1443, 1641
FauNDI	CATATG	2 cut(s)	1150, 1187
FblI	GTMKAC	1 cut(s)	165
FokI	GGATG	5 cut(s)	894, 1186, 1286, 1673, 1715
FspBI	CTAG	3 cut(s)	717, 747, 1368
GlaI	GCGC	2 cut(s)	70, 72
GsaI	CCCAGC	1 cut(s)	869
GsuI	CTGGAG	2 cut(s)	1098, 1373
HgaI	GACGC	4 cut(s)	257, 290, 392, 1564
HhaI	GCGC	2 cut(s)	71, 73
Hin1I	GRCGYC	5 cut(s)	249, 282, 308, 384, 1556
Hin1II	CATG	4 cut(s)	1051, 1438, 1447, 1645
Hin6I	GCGC	2 cut(s)	69, 71
HinP1I	GCGC	2 cut(s)	69, 71
HincII	GTYRAC	1 cut(s)	166
HindII	GTYRAC	1 cut(s)	166
HindIII	AAGCTT	3 cut(s)	737, 1007, 1512
HphI	GGTGA	1 cut(s)	881
Hpy166II	GTNNAC	2 cut(s)	166, 1413
Hpy8I	GTNNAC	2 cut(s)	166, 1413
Hpy99I	CGWCG	7 cut(s)	89, 284, 310, 313, 386, 464, 481
HpyAV	CCTTC	8 cut(s)	72, 116, 523, 577, 787, 1154, 1296, 1743
HpyCH4III	ACNGT	2 cut(s)	623, 632
HpyCH4IV	ACGT	3 cut(s)	308, 1498, 1684
HpyCH4V	TGCA	7 cut(s)	555, 684, 1105, 1429, 1522, 1587, 1664
HpyF10VI	GCNNNNNNNGC	4 cut(s)	490, 664, 820, 1084
HpyF3I	CTNAG	5 cut(s)	47, 345, 897, 1079, 1792
HpySE526I	ACGT	3 cut(s)	308, 1498, 1684
Hsp92I	GRCGYC	5 cut(s)	249, 282, 308, 384, 1556
Hsp92II	CATG	4 cut(s)	1051, 1438, 1447, 1645
HspAI	GCGC	2 cut(s)	69, 71
Kpn2I	TCCGGA	1 cut(s)	10
LguI	GCTCTTC	1 cut(s)	855
LmnI	GCTCC	7 cut(s)	13, 40, 208, 361, 490, 819, 1699
Lsp1109I	GCAGC	8 cut(s)	45, 120, 175, 567, 668, 703, 835, 1663
LweI	GCATC	6 cut(s)	45, 1009, 1208, 1416, 1596, 1651
MaeI	CTAG	3 cut(s)	717, 747, 1368
MaeII	ACGT	3 cut(s)	308, 1498, 1684
MaeIII	GTNAC	2 cut(s)	421, 608
MbiI	CCGCTC	1 cut(s)	413
MflI	RGATCY	2 cut(s)	1270, 1358
MhlI	GDGCHC	2 cut(s)	1089, 1112
MlsI	TGGCCA	2 cut(s)	1097, 1544
MluCI	AATT	2 cut(s)	335, 1757
MluNI	TGGCCA	2 cut(s)	1097, 1544
MlyI	GAGTC	4 cut(s)	167, 344, 605, 713
Mox20I	TGGCCA	2 cut(s)	1097, 1544
Mph1103I	ATGCAT	2 cut(s)	1589, 1666
MroI	TCCGGA	1 cut(s)	10
MroXI	GAANNNNTTC	1 cut(s)	1409
MscI	TGGCCA	2 cut(s)	1097, 1544
MseI	TTAA	3 cut(s)	639, 1176, 1472
Msp20I	TGGCCA	2 cut(s)	1097, 1544
MspA1I	CMGCKG	3 cut(s)	133, 188, 526
MspCI	CTTAAG	1 cut(s)	1471
MspR9I	CCNGG	2 cut(s)	912, 1733
Mva1269I	GAATGC	1 cut(s)	1664
MvaI	CCWGG	2 cut(s)	912, 1733
MvnI	CGCG	1 cut(s)	71
MwoI	GCNNNNNNNGC	4 cut(s)	490, 664, 820, 1084
NdeI	CATATG	2 cut(s)	1150, 1187
NlaIII	CATG	4 cut(s)	1051, 1438, 1447, 1645
NlaIV	GGNNCC	5 cut(s)	9, 15, 363, 492, 1823
NmeAIII	GCCGAG	4 cut(s)	256, 462, 814, 1517
NmuCI	GTSAC	2 cut(s)	421, 608
NsiI	ATGCAT	2 cut(s)	1589, 1666
PagI	TCATGA	2 cut(s)	1047, 1443
PalAI	GGCGCGCC	1 cut(s)	69
PaqCI	CACCTGC	1 cut(s)	549
PauI	GCGCGC	1 cut(s)	69
PciSI	GCTCTTC	1 cut(s)	855
PcsI	WCGNNNNNNNCGW	3 cut(s)	93, 288, 302
PctI	GAATGC	1 cut(s)	1664
PdmI	GAANNNNTTC	1 cut(s)	1409
PfeI	GAWTC	7 cut(s)	220, 443, 935, 1447, 1535, 1608, 1721
PfoI	TCCNGGA	1 cut(s)	1731
PinAI	ACCGGT	2 cut(s)	370, 468
Ple19I	CGATCG	1 cut(s)	244
PleI	GAGTC	4 cut(s)	167, 344, 605, 712
PmaCI	CACGTG	1 cut(s)	1685
PmlI	CACGTG	1 cut(s)	1685
PpsI	GAGTC	4 cut(s)	167, 344, 605, 712
Ppu21I	YACGTR	1 cut(s)	1685
Psp1406I	AACGTT	1 cut(s)	1498
Psp6I	CCWGG	2 cut(s)	910, 1731
PspCI	CACGTG	1 cut(s)	1685
PspFI	CCCAGC	1 cut(s)	865
PspGI	CCWGG	2 cut(s)	910, 1731
PspN4I	GGNNCC	5 cut(s)	9, 15, 363, 492, 1823
PspPI	GGNCC	8 cut(s)	125, 471, 516, 786, 940, 1296, 1489, 1821
PsuI	RGATCY	2 cut(s)	1270, 1358
PteI	GCGCGC	1 cut(s)	69
PvuI	CGATCG	1 cut(s)	244
RsaI	GTAC	9 cut(s)	119, 620, 891, 920, 926, 1147, 1239, 1463, 1469
RsaNI	GTAC	9 cut(s)	118, 619, 890, 919, 925, 1146, 1238, 1462, 1468
SalI	GTCGAC	1 cut(s)	164
SapI	GCTCTTC	1 cut(s)	855
SaqAI	TTAA	3 cut(s)	639, 1176, 1472
Sau96I	GGNCC	8 cut(s)	125, 471, 516, 786, 940, 1296, 1489, 1821
ScaI	AGTACT	2 cut(s)	620, 1469
SchI	GAGTC	4 cut(s)	167, 344, 605, 713
ScrFI	CCNGG	2 cut(s)	912, 1733
SduI	GDGCHC	2 cut(s)	1089, 1112
SfaNI	GCATC	6 cut(s)	45, 1009, 1208, 1416, 1596, 1651
SfcI	CTRYAG	2 cut(s)	622, 696
SgsI	GGCGCGCC	1 cut(s)	69
SinI	GGWCC	2 cut(s)	471, 1296
SmlI	CTYRAG	3 cut(s)	1088, 1471, 1484
SmoI	CTYRAG	3 cut(s)	1088, 1471, 1484
Sse9I	AATT	2 cut(s)	335, 1757
SsiI	CCGC	9 cut(s)	5, 131, 186, 285, 413, 416, 482, 524, 821
SspMI	CTAG	3 cut(s)	717, 747, 1368
StyD4I	CCNGG	2 cut(s)	910, 1731
StyI	CCWWGG	2 cut(s)	150, 1539
TaaI	ACNGT	2 cut(s)	623, 632
TaiI	ACGT	3 cut(s)	311, 1501, 1687
TaqI	TCGA	9 cut(s)	96, 165, 171, 218, 240, 305, 353, 375, 1569
TasI	AATT	2 cut(s)	335, 1757
TatI	WGTACW	3 cut(s)	618, 1461, 1467
TauI	GCSGC	6 cut(s)	8, 287, 416, 484, 526, 823
TfiI	GAWTC	7 cut(s)	220, 443, 935, 1447, 1535, 1608, 1721
Tru1I	TTAA	3 cut(s)	639, 1176, 1472
Tru9I	TTAA	3 cut(s)	639, 1176, 1472
TscAI	CASTG	2 cut(s)	1112, 1552
TseFI	GTSAC	2 cut(s)	421, 608
TseI	GCWGC	8 cut(s)	58, 133, 188, 555, 681, 691, 823, 1676
Tsp45I	GTSAC	2 cut(s)	421, 608
TspDTI	ATGAA	9 cut(s)	1036, 1064, 1152, 1201, 1209, 1451, 1506, 1587, 1722
TspGWI	ACGGA	1 cut(s)	467
TspRI	CASTG	2 cut(s)	1112, 1552
Vha464I	CTTAAG	1 cut(s)	1471
VpaK11BI	GGWCC	2 cut(s)	471, 1296
XapI	RAATTY	1 cut(s)	335
XmiI	GTMKAC	1 cut(s)	165
XmnI	GAANNNNTTC	1 cut(s)	1409
XspI	CTAG	3 cut(s)	717, 747, 1368
ZraI	GACGTC	1 cut(s)	309
ZrmI	AGTACT	2 cut(s)	620, 1469
Zsp2I	ATGCAT	2 cut(s)	1589, 1666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.