Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006214.1

Orthogroup ID

OG0003471

Physical Location & Seq

Genomic Coordinates Reverse (-)

3534 .. 11361

Gene Structure 7828 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006214.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3255 bp

atgaagttccggtacgccatggtgtgctcgtccaaccagaaccggagcatggaggctcacgcgctcctcaagcgtcaaggcttcgatgtctcgtcgtacggcactggatcccacgttaagctccctggaccttccctcagagaacccaacgtttacgagtttggaactccttacaagcagatgttagacgagctcagacgaaaagacccagaattgtacaagcggaatggcattttgcctatgcttaagagaaacgcggcagttaaactggcacctcagcggtggcaagacaatgctgctgatggtttctttgacgtggtatttacttttgaagaaaaggtttttgatatggttgttgaagatcttcacaatcgggatcatgtgcttaagaagtgtgtattgataatcaacttggaagtaaaagataaccacgaggaagcagctgtgggagctcgtcttgctttagatctttgccaagagattgatgcgaccgagtcatgggaggattcaatcgatgacattctgactgcttttgagaaacagcatcggcggaattacaatctttctctcttccatttccggttttctcgcgggtcctctaacggccgcgccatggcgagaccggaacccgaggacgagaaaagctggcaggagctactcagaaagatgctgccttccggcgtgccgttgccggacgacgaccatctcgactactccatcgcagttgagtacgaaggccctccgctgccctacgaagtccccaaggttgatccggtcgacatcgactcgcttcacaccgctgcttccggagcttcgggttcgggttcggagctttcttcgattccggtggccgagccggtcgatcgggacgcctctcggttcagccggatcaggaacggcgacgccgcaaacgaaacgcagacttcgacgtcgttttcggtaggtttcagctctgaattttcagctcaggactcgaactcggagccgaaaccggtcgaggacgacgccggaggaggaggaaacagagcggcggtcgtgactttcaacacgccgagagaatcggagacggaagacgacggcgaccggtcctcgtcgccgcaatcggagccggtggggtcgccggttgcttgggcctcgccgctgaaggtagcgagtaagagagggatttgcagcaggtgtggaaaagggaacagattgaaggagagggagtggtgcttggtgtgtgactcaaagtactgtagcaactgtttgcttaaagctatgggatcaatgccggaggggcgaaaatgtgtgagctgcattgggcagcctatagatgagtccaagaggcctagtttgggcaagtgttcaaagcttctttctagggtttgtagtcctttggagattgggcagataatgagggccgagaaggagtgtccggccaatcagctccggccgcagcagttggttgtgaatgggagggagttgagggaagaagagctgggtgagattttgggatgtgaagtacctcctcagaagttgaagcctgggaggtactggtacgataaggattcgggcctctggggaaaggagggagagaagcctgattgtatcattactccgaaactgaatgttgggggtaagcttcgggctgatgccagcaatgggagcactaatgtattcatgaatggcagagagatcacaaagattgagcttagggtgctcaagctggccaaagtgcagtgccctccagatactcatttctgggtgtatgaagatggtacatatgaggaggaagggcagaataacattaaaggaaacatatggggaaaggcaaccacccgtttcatttgttcattattctcattgcctgtaccatctcgtaatcaaaatggggcaagagaagatcctatgacacaaccttcaagtaggtccatccctgaatacttggatcaagcaagagttcaaaaacttttgttatttggtctggagggatctggaactagcaccatcttcaagcaggccaagttcttatatgggaacgagttcactcccgaggaggtgcagaacatgaagctcatgattcaaagtaatatgtacaagtacttaagtatattacttgagggccgagaacgttttgaagaggaagattcattgcagaatacttctgattccttggccactgacgagacgccatcagtagtcgatggaagtaagcaatgcatctattctatcaaccaaagattcaagcacttttctgactggttgctggatatcatggcaaccggagacttggatgcattcttccctgctgctacacgtgagtatgctcctattgtagatgaagtgtggaaagattctgccatccaggaaacatacaaaagaagggaggaattacattgtcttccagaagttgccaagtatttcttagatcgggctatagaaatatcaagtaatgagtatgagccaaccgagaaggacattttatatgctgaaggagttactcaaagcaatggccttacctctctagaattttcatttgatgatagaagctccatgtcagagctatacaacgaaaactatgaatgcccccttccgttaaccaagtaccaactaatttgtcttagttctaagggactaaatgaggggtgcaaatggcttgcaatgtttgaagacgtgagggcagtgattttttgtgttgctttgagtgactatgatcaaatgtgggcccttggtaatgggcgtcttcataataaattgctggcaagcagagatttgttcgagagtttggtgaggcacccttgttttagtaacactccatttgttcttgtgctgaacaaatatgatgcatttgaagacaagataggccaggttccattgtcagcttgtgagtggttcaatgacttcaaccctgttaagccgcacaataatagtcaggctctagctcagcaagcatattactatgtggcagtgaaattcaaagagctctatttatccttaagcggtcaaaagttatttgtagtgcaaacccgagctagagatggtaactcggttgatgtggcattcaagtacataagggaggtcctcaagtgggatgaagaaaaggatgataatttctttggaataaatggggatgactcctatttcaccgtcatgagactgagttttatcattcgtgctattaccgcttgtagaaggctggatttgtttcataggttagaccggatttcttttcaagcttatttgccattctggctgattagatacatgagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04015 ko04022 ko04024 ko04062 ko04071 ko04261 ko04360 ko04371 ko04540 ko04611 ko04670 ko04713 ko04723 ko04724 ko04725 ko04726 ko04727 ko04728 ko04730 ko04914 ko04915 ko04916 ko04921 ko04923 ko04924 ko04926 ko04934 ko04971 ko05012 ko05030 ko05032 ko05034 ko05133 ko05142 ko05145 ko05200 map04015 map04022 map04024 map04062 map04071 map04261 map04360 map04371 map04540 map04611 map04670 map04713 map04723 map04724 map04725 map04726 map04727 map04728 map04730 map04914 map04915 map04916 map04921 map04923 map04924 map04926 map04934 map04971 map05012 map05030 map05032 map05034 map05133 map05142 map05145 map05200

Pfam Domains

Protein Families

G-alpha

Protein Analysis

1084

Amino Acids

122.85

Weight (kDa)

5.27

Isoelectric Point (pI)

45.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003471)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17740 FvH4_5g17740
malus_domestica	MD06G1232900.v1.1 MD14G1239900.v1.1
prunus_persica	Prupe.5G237500_v2.0.a1 Prupe.5G237500_v2.0.a1
pyrus_communis	pycom06g20790 pycom14g20150
rosa_chinensis	RchiOBHm_Chr5g0016271 RchiOBHm_Chr7g0177881
rosa_laevigata	RLG00000003463 RLG00000005494 RLG00000019305 RLG00000035269
rosa_multiflora	Rmu_sc0000141.1_g000001 Rmu_sc0004510.1_g000005 Rmu_sc0006214.1_g000003 Rmu_sc0006997.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129380 Rroxscaffold_3G00275470
rosa_rugosa	Rorug04G0425800 Rorug06G0410700 Rorug06G0410800
rosa_samantha	Rh1CG219000 Rh4CG242300 Rh5AG324200 Rh5CG136200 Rh7AG009900 Rh7AG127600 Rh7BG010000 Rh7BG128600 Rh7BG129500 Rh7CG130400 Rh7CG131800 Rh7DG010000
rosa_wichuraiana	Rw7G000830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1164
AasI	GACNNNNNNGTC	1 cut(s)	928
AatII	GACGTC	1 cut(s)	932
Acc36I	ACCTGC	1 cut(s)	1164
AccB1I	GGYRCC	2 cut(s)	271, 2775
AccBSI	CCGCTC	1 cut(s)	1028
AccI	GTMKAC	1 cut(s)	777
AccII	CGCG	4 cut(s)	62, 257, 591, 609
AccIII	TCCGGA	1 cut(s)	806
AclI	AACGTT	2 cut(s)	150, 2113
AclWI	GGATC	9 cut(s)	102, 115, 384, 764, 896, 1273, 1880, 1938, 1981
AcoI	YGGCCR	6 cut(s)	604, 849, 1419, 1433, 1710, 2157
AcsI	RAATTY	3 cut(s)	956, 2510, 2954
AcuI	CTGAAG	2 cut(s)	1163, 2493
AcvI	CACGTG	1 cut(s)	2300
AcyI	GRCGYC	6 cut(s)	870, 903, 929, 1005, 2171, 2722
AfiI	CCNNNNNNNGG	6 cut(s)	49, 498, 613, 1337, 1644, 3070
AflII	CTTAAG	4 cut(s)	245, 386, 2086, 2977
AflIII	ACRYGT	1 cut(s)	2297
AgeI	ACCGGT	2 cut(s)	991, 1083
AjiI	CACGTC	2 cut(s)	316, 2656
AjnI	CCWGG	4 cut(s)	124, 1525, 2346, 2847
Alw21I	GWGCWC	6 cut(s)	29, 195, 454, 1652, 1704, 2967
Alw26I	GTCTC	6 cut(s)	94, 613, 1058, 2162, 2262, 3130
AlwI	GGATC	9 cut(s)	102, 115, 384, 764, 896, 1273, 1880, 1938, 1981
Ama87I	CYCGRG	3 cut(s)	629, 2033, 3009
Aor13HI	TCCGGA	1 cut(s)	806
ApaI	GGGCCC	1 cut(s)	2710
ApoI	RAATTY	3 cut(s)	956, 2510, 2954
ArsI	GACNNNNNNTTYG	2 cut(s)	919, 951
AsiGI	ACCGGT	2 cut(s)	991, 1083
Asp700I	GAANNNNTTC	2 cut(s)	363, 2024
AspLEI	GCGC	2 cut(s)	64, 611
AsuHPI	GGTGA	3 cut(s)	1496, 2782, 3118
AvaI	CYCGRG	3 cut(s)	629, 2033, 3009
AvaII	GGWCC	5 cut(s)	128, 594, 1086, 1911, 3061
BaeGI	GKGCMC	2 cut(s)	1727, 2710
BalI	TGGCCA	2 cut(s)	1712, 2159
BamHI	GGATCC	1 cut(s)	107
BanI	GGYRCC	2 cut(s)	271, 2775
BanII	GRGCYC	4 cut(s)	195, 454, 2710, 2967
BarI	GAAGNNNNNNTAC	1 cut(s)	28
BauI	CACGAG	1 cut(s)	431
BbrPI	CACGTG	1 cut(s)	2300
BbsI	GAAGAC	5 cut(s)	1077, 2375, 2658, 2717, 2841
Bbv12I	GWGCWC	6 cut(s)	29, 195, 454, 1652, 1704, 2967
BbvCI	CCTCAGC	1 cut(s)	276
BceAI	ACGGC	5 cut(s)	115, 619, 670, 913, 1093
BciT130I	CCWGG	4 cut(s)	126, 1527, 2348, 2849
BclI	TGATCA	1 cut(s)	2695
BcoDI	GTCTC	6 cut(s)	94, 613, 1058, 2162, 2262, 3130
BfaI	CTAG	6 cut(s)	1332, 1362, 1983, 2507, 2921, 3015
BfmI	CTRYAG	3 cut(s)	1237, 1311, 2418
BfrI	CTTAAG	4 cut(s)	245, 386, 2086, 2977
BfuAI	ACCTGC	1 cut(s)	1164
BglI	GCCNNNNNGGC	2 cut(s)	1279, 3232
BglII	AGATCT	2 cut(s)	361, 466
BlpI	GCTNAGC	1 cut(s)	2925
BmcAI	AGTACT	2 cut(s)	1235, 2084
Bme1390I	CCNGG	4 cut(s)	126, 1527, 2348, 2849
Bme18I	GGWCC	5 cut(s)	128, 594, 1086, 1911, 3061
BmeT110I	CYCGRG	3 cut(s)	629, 2033, 3009
BmgBI	CACGTC	2 cut(s)	316, 2656
BmiI	GGNNCC	9 cut(s)	109, 273, 595, 627, 984, 1107, 2708, 2777, 2853
BmrFI	CCNGG	4 cut(s)	126, 1527, 2348, 2849
BmsI	GCATC	7 cut(s)	475, 553, 657, 1624, 2211, 2266, 2815
BpiI	GAAGAC	5 cut(s)	1077, 2375, 2658, 2717, 2841
BpmI	CTGGAG	2 cut(s)	1713, 1988
Bpu10I	CCTNAGC	3 cut(s)	276, 966, 1694
Bpu1102I	GCTNAGC	1 cut(s)	2925
BpuEI	CTTGAG	4 cut(s)	53, 1688, 2120, 3050
Bsa29I	ATCGAT	1 cut(s)	513
BsaAI	YACGTR	1 cut(s)	2300
BsaHI	GRCGYC	6 cut(s)	870, 903, 929, 1005, 2171, 2722
BsaI	GGTCTC	1 cut(s)	613
BsaJI	CCNNGG	9 cut(s)	18, 124, 612, 630, 762, 1526, 2034, 2154, 2710
BsaXI	ACNNNNNCTCC	2 cut(s)	1193, 1223
Bsc4I	CCNNNNNNNGG	6 cut(s)	49, 498, 613, 1337, 1644, 3070
Bse118I	RCCGGY	5 cut(s)	856, 991, 1083, 1108, 1120
Bse1I	ACTGG	4 cut(s)	109, 273, 1541, 2246
Bse3DI	GCAATG	6 cut(s)	1648, 1844, 2132, 2204, 2497, 2649
BseAI	TCCGGA	1 cut(s)	806
BseBI	CCWGG	4 cut(s)	126, 1527, 2348, 2849
BseCI	ATCGAT	1 cut(s)	513
BseDI	CCNNGG	9 cut(s)	18, 124, 612, 630, 762, 1526, 2034, 2154, 2710
BseGI	GGATG	7 cut(s)	1502, 1914, 2281, 2343, 3079, 3091, 3118
BseLI	CCNNNNNNNGG	6 cut(s)	49, 498, 613, 1337, 1644, 3070
BseMI	GCAATG	6 cut(s)	1648, 1844, 2132, 2204, 2497, 2649
BseMII	CTCAG	8 cut(s)	151, 208, 290, 673, 980, 1526, 2939, 3131
BseNI	ACTGG	4 cut(s)	109, 273, 1541, 2246
BseRI	GAGGAG	6 cut(s)	56, 1026, 1029, 1500, 1784, 2051
BseSI	GKGCMC	2 cut(s)	1727, 2710
BseX3I	CGGCCG	2 cut(s)	604, 1433
BseYI	CCCAGC	1 cut(s)	1480
BsgI	GTGCAG	2 cut(s)	1739, 2063
Bsh1236I	CGCG	4 cut(s)	62, 257, 591, 609
Bsh1285I	CGRYCG	9 cut(s)	492, 607, 777, 861, 865, 996, 1035, 1084, 1436
BshNI	GGYRCC	2 cut(s)	271, 2775
BshTI	ACCGGT	2 cut(s)	991, 1083
BshVI	ATCGAT	1 cut(s)	513
BsiEI	CGRYCG	9 cut(s)	492, 607, 777, 861, 865, 996, 1035, 1084, 1436
BsiHKAI	GWGCWC	6 cut(s)	29, 195, 454, 1652, 1704, 2967
BsiHKCI	CYCGRG	3 cut(s)	629, 2033, 3009
BsiWI	CGTACG	1 cut(s)	96
BslFI	GGGAC	3 cut(s)	743, 881, 2628
BslI	CCNNNNNNNGG	6 cut(s)	49, 498, 613, 1337, 1644, 3070
BsmAI	GTCTC	6 cut(s)	94, 613, 1058, 2162, 2262, 3130
BsmBI	CGTCTC	2 cut(s)	1058, 2162
BsmFI	GGGAC	3 cut(s)	743, 881, 2628
BsmI	GAATGC	3 cut(s)	2279, 2570, 3041
Bso31I	GGTCTC	1 cut(s)	613
BsoBI	CYCGRG	3 cut(s)	629, 2033, 3009
Bsp120I	GGGCCC	1 cut(s)	2706
Bsp1286I	GDGCHC	8 cut(s)	29, 195, 454, 1652, 1704, 1727, 2710, 2967
Bsp13I	TCCGGA	1 cut(s)	806
Bsp1407I	TGTACA	2 cut(s)	216, 2076
Bsp1720I	GCTNAGC	1 cut(s)	2925
Bsp19I	CCATGG	2 cut(s)	18, 612
BspCNI	CTCAG	8 cut(s)	150, 207, 289, 672, 979, 1525, 2938, 3132
BspDI	ATCGAT	1 cut(s)	513
BspEI	TCCGGA	1 cut(s)	806
BspFNI	CGCG	4 cut(s)	62, 257, 591, 609
BspHI	TCATGA	3 cut(s)	1662, 2058, 3132
BspLI	GGNNCC	9 cut(s)	109, 273, 595, 627, 984, 1107, 2708, 2777, 2853
BspMI	ACCTGC	1 cut(s)	1164
BspPI	GGATC	9 cut(s)	102, 115, 384, 764, 896, 1273, 1880, 1938, 1981
BspQI	GCTCTTC	1 cut(s)	1470
BspT107I	GGYRCC	2 cut(s)	271, 2775
BspTI	CTTAAG	4 cut(s)	245, 386, 2086, 2977
BspTNI	GGTCTC	1 cut(s)	613
BsrBI	CCGCTC	1 cut(s)	1028
BsrDI	GCAATG	6 cut(s)	1648, 1844, 2132, 2204, 2497, 2649
BsrFI	RCCGGY	5 cut(s)	856, 991, 1083, 1108, 1120
BsrGI	TGTACA	2 cut(s)	216, 2076
BsrI	ACTGG	4 cut(s)	109, 273, 1541, 2246
BssAI	RCCGGY	5 cut(s)	856, 991, 1083, 1108, 1120
BssECI	CCNNGG	9 cut(s)	18, 124, 612, 630, 762, 1526, 2034, 2154, 2710
BssNI	GRCGYC	6 cut(s)	870, 903, 929, 1005, 2171, 2722
BssSI	CACGAG	1 cut(s)	431
BssT1I	CCWWGG	5 cut(s)	18, 612, 762, 2154, 2710
Bst2BI	CACGAG	1 cut(s)	431
Bst2UI	CCWGG	4 cut(s)	126, 1527, 2348, 2849
Bst4CI	ACNGT	3 cut(s)	1238, 1247, 3130
Bst6I	CTCTTC	3 cut(s)	575, 1470, 2115
BstACI	GRCGYC	6 cut(s)	870, 903, 929, 1005, 2171, 2722
BstAFI	CTTAAG	4 cut(s)	245, 386, 2086, 2977
BstAUI	TGTACA	2 cut(s)	216, 2076
BstBAI	YACGTR	1 cut(s)	2300
BstC8I	GCNNGC	9 cut(s)	647, 683, 1639, 1710, 2001, 2640, 2742, 2746, 2931
BstDSI	CCRYGG	2 cut(s)	18, 612
BstF5I	GGATG	7 cut(s)	1502, 1914, 2281, 2343, 3079, 3091, 3118
BstFNI	CGCG	4 cut(s)	62, 257, 591, 609
BstHHI	GCGC	2 cut(s)	64, 611
BstMAI	GTCTC	6 cut(s)	94, 613, 1058, 2162, 2262, 3130
BstMCI	CGRYCG	9 cut(s)	492, 607, 777, 861, 865, 996, 1035, 1084, 1436
BstNI	CCWGG	4 cut(s)	126, 1527, 2348, 2849
BstSCI	CCNGG	4 cut(s)	124, 1525, 2346, 2847
BstSFI	CTRYAG	3 cut(s)	1237, 1311, 2418
BstSLI	GKGCMC	2 cut(s)	1727, 2710
BstUI	CGCG	4 cut(s)	62, 257, 591, 609
BstV2I	GAAGAC	5 cut(s)	1077, 2375, 2658, 2717, 2841
BstX2I	RGATCY	5 cut(s)	107, 361, 466, 1885, 1973
BstYI	RGATCY	5 cut(s)	107, 361, 466, 1885, 1973
BstZI	CGGCCG	2 cut(s)	604, 1433
Bsu15I	ATCGAT	1 cut(s)	513
BsuTUI	ATCGAT	1 cut(s)	513
BtgI	CCRYGG	2 cut(s)	18, 612
BtgZI	GCGATG	1 cut(s)	703
BtrI	CACGTC	2 cut(s)	316, 2656
BtsCI	GGATG	7 cut(s)	1502, 1914, 2281, 2343, 3079, 3091, 3118
BtsI	GCAGTG	3 cut(s)	1727, 2670, 2955
BtsIMutI	CAGTG	5 cut(s)	102, 1727, 2160, 2670, 2955
BveI	ACCTGC	1 cut(s)	1164
Cac8I	GCNNGC	9 cut(s)	647, 683, 1639, 1710, 2001, 2640, 2742, 2746, 2931
CciI	TCATGA	3 cut(s)	1662, 2058, 3132
CfoI	GCGC	2 cut(s)	64, 611
Cfr10I	RCCGGY	5 cut(s)	856, 991, 1083, 1108, 1120
ClaI	ATCGAT	1 cut(s)	513
CseI	GACGC	6 cut(s)	62, 878, 911, 1013, 2179, 2711
CspAI	ACCGGT	2 cut(s)	991, 1083
DrdI	GACNNNNNNGTC	1 cut(s)	928
DseDI	GACNNNNNNGTC	1 cut(s)	928
EaeI	YGGCCR	6 cut(s)	604, 849, 1419, 1433, 1710, 2157
EagI	CGGCCG	2 cut(s)	604, 1433
Eam1104I	CTCTTC	3 cut(s)	575, 1470, 2115
EarI	CTCTTC	3 cut(s)	575, 1470, 2115
EciI	GGCGGA	1 cut(s)	565
Ecl136II	GAGCTC	3 cut(s)	193, 452, 2965
EclXI	CGGCCG	2 cut(s)	604, 1433
Eco130I	CCWWGG	5 cut(s)	18, 612, 762, 2154, 2710
Eco147I	AGGCCT	1 cut(s)	1330
Eco24I	GRGCYC	4 cut(s)	195, 454, 2710, 2967
Eco31I	GGTCTC	1 cut(s)	613
Eco32I	GATATC	1 cut(s)	2254
Eco47I	GGWCC	5 cut(s)	128, 594, 1086, 1911, 3061
Eco52I	CGGCCG	2 cut(s)	604, 1433
Eco53kI	GAGCTC	3 cut(s)	193, 452, 2965
Eco57I	CTGAAG	2 cut(s)	1163, 2493
Eco72I	CACGTG	1 cut(s)	2300
Eco88I	CYCGRG	3 cut(s)	629, 2033, 3009
EcoICRI	GAGCTC	3 cut(s)	193, 452, 2965
EcoO109I	RGGNCCY	4 cut(s)	594, 737, 2707, 3061
EcoRII	CCWGG	4 cut(s)	124, 1525, 2346, 2847
EcoRV	GATATC	1 cut(s)	2254
EcoT14I	CCWWGG	5 cut(s)	18, 612, 762, 2154, 2710
EcoT22I	ATGCAT	3 cut(s)	2204, 2281, 2830
EcoT38I	GRGCYC	4 cut(s)	195, 454, 2710, 2967
ErhI	CCWWGG	5 cut(s)	18, 612, 762, 2154, 2710
Esp3I	CGTCTC	2 cut(s)	1058, 2162
FalI	AAGNNNNNCTT	2 cut(s)	2390, 2422
FaqI	GGGAC	3 cut(s)	743, 881, 2628
FauI	CCCGC	1 cut(s)	584
FauNDI	CATATG	2 cut(s)	1765, 1802
FbaI	TGATCA	1 cut(s)	2695
FblI	GTMKAC	1 cut(s)	777
FokI	GGATG	7 cut(s)	1509, 1901, 2288, 2330, 3086, 3098, 3125
FriOI	GRGCYC	4 cut(s)	195, 454, 2710, 2967
FspBI	CTAG	6 cut(s)	1332, 1362, 1983, 2507, 2921, 3015
GlaI	GCGC	2 cut(s)	63, 610
GsaI	CCCAGC	1 cut(s)	1484
GsuI	CTGGAG	2 cut(s)	1713, 1988
HgaI	GACGC	6 cut(s)	62, 878, 911, 1013, 2179, 2711
HhaI	GCGC	2 cut(s)	64, 611
Hin1I	GRCGYC	6 cut(s)	870, 903, 929, 1005, 2171, 2722
Hin6I	GCGC	2 cut(s)	62, 609
HinP1I	GCGC	2 cut(s)	62, 609
HincII	GTYRAC	2 cut(s)	778, 2580
HindII	GTYRAC	2 cut(s)	778, 2580
HindIII	AAGCTT	3 cut(s)	1352, 1622, 3216
HpaI	GTTAAC	1 cut(s)	2580
HphI	GGTGA	3 cut(s)	1496, 2782, 3118
Hpy166II	GTNNAC	4 cut(s)	154, 778, 2028, 2580
Hpy8I	GTNNAC	4 cut(s)	154, 778, 2028, 2580
Hpy99I	CGWCG	8 cut(s)	97, 701, 905, 931, 934, 1007, 1079, 1096
HpyCH4III	ACNGT	3 cut(s)	1238, 1247, 3130
HpyCH4IV	ACGT	7 cut(s)	114, 150, 315, 929, 2113, 2299, 2655
HpySE526I	ACGT	7 cut(s)	114, 150, 315, 929, 2113, 2299, 2655
Hsp92I	GRCGYC	6 cut(s)	870, 903, 929, 1005, 2171, 2722
HspAI	GCGC	2 cut(s)	62, 609
Kpn2I	TCCGGA	1 cut(s)	806
Ksp22I	TGATCA	1 cut(s)	2695
KspAI	GTTAAC	1 cut(s)	2580
LguI	GCTCTTC	1 cut(s)	1470
LweI	GCATC	7 cut(s)	475, 553, 657, 1624, 2211, 2266, 2815
MaeI	CTAG	6 cut(s)	1332, 1362, 1983, 2507, 2921, 3015
MaeII	ACGT	7 cut(s)	114, 150, 315, 929, 2113, 2299, 2655
MaeIII	GTNAC	6 cut(s)	1036, 1223, 2479, 2687, 2789, 3023
MbiI	CCGCTC	1 cut(s)	1028
MflI	RGATCY	5 cut(s)	107, 361, 466, 1885, 1973
MhlI	GDGCHC	8 cut(s)	29, 195, 454, 1652, 1704, 1727, 2710, 2967
MlsI	TGGCCA	2 cut(s)	1712, 2159
MluCI	AATT	9 cut(s)	212, 553, 956, 2372, 2510, 2595, 2735, 2954, 3091
MluNI	TGGCCA	2 cut(s)	1712, 2159
MlyI	GAGTC	6 cut(s)	503, 779, 965, 1220, 1328, 3110
MmeI	TCCRAC	1 cut(s)	57
Mox20I	TGGCCA	2 cut(s)	1712, 2159
Mph1103I	ATGCAT	3 cut(s)	2204, 2281, 2830
MroI	TCCGGA	1 cut(s)	806
MroXI	GAANNNNTTC	2 cut(s)	363, 2024
MscI	TGGCCA	2 cut(s)	1712, 2159
MslI	CAYNNNNRTG	1 cut(s)	3131
Msp20I	TGGCCA	2 cut(s)	1712, 2159
MspA1I	CMGCKG	5 cut(s)	280, 443, 745, 800, 1141
MspCI	CTTAAG	4 cut(s)	245, 386, 2086, 2977
MspR9I	CCNGG	4 cut(s)	126, 1527, 2348, 2849
Mva1269I	GAATGC	3 cut(s)	2279, 2570, 3041
MvaI	CCWGG	4 cut(s)	126, 1527, 2348, 2849
MvnI	CGCG	4 cut(s)	62, 257, 591, 609
NcoI	CCATGG	2 cut(s)	18, 612
NdeI	CATATG	2 cut(s)	1765, 1802
NlaIV	GGNNCC	9 cut(s)	109, 273, 595, 627, 984, 1107, 2708, 2777, 2853
NmeAIII	GCCGAG	4 cut(s)	877, 1077, 1429, 2132
NmuCI	GTSAC	3 cut(s)	1036, 1223, 2687
NsiI	ATGCAT	3 cut(s)	2204, 2281, 2830
PagI	TCATGA	3 cut(s)	1662, 2058, 3132
PaqCI	CACCTGC	1 cut(s)	1164
PceI	AGGCCT	1 cut(s)	1330
PciSI	GCTCTTC	1 cut(s)	1470
PcsI	WCGNNNNNNNCGW	3 cut(s)	705, 909, 923
PctI	GAATGC	3 cut(s)	2279, 2570, 3041
PdmI	GAANNNNTTC	2 cut(s)	363, 2024
PfeI	GAWTC	9 cut(s)	506, 841, 1058, 1550, 2062, 2129, 2150, 2223, 2336
Pfl23II	CGTACG	1 cut(s)	96
PflFI	GACNNNGTC	1 cut(s)	493
PfoI	TCCNGGA	1 cut(s)	2346
PinAI	ACCGGT	2 cut(s)	991, 1083
Ple19I	CGATCG	1 cut(s)	865
PleI	GAGTC	6 cut(s)	502, 779, 965, 1220, 1327, 3110
PmaCI	CACGTG	1 cut(s)	2300
PmlI	CACGTG	1 cut(s)	2300
PpsI	GAGTC	6 cut(s)	502, 779, 965, 1220, 1327, 3110
Ppu21I	YACGTR	1 cut(s)	2300
PpuMI	RGGWCCY	2 cut(s)	594, 3061
Psp124BI	GAGCTC	3 cut(s)	195, 454, 2967
Psp1406I	AACGTT	2 cut(s)	150, 2113
Psp5II	RGGWCCY	2 cut(s)	594, 3061
Psp6I	CCWGG	4 cut(s)	124, 1525, 2346, 2847
PspCI	CACGTG	1 cut(s)	2300
PspFI	CCCAGC	1 cut(s)	1480
PspGI	CCWGG	4 cut(s)	124, 1525, 2346, 2847
PspLI	CGTACG	1 cut(s)	96
PspN4I	GGNNCC	9 cut(s)	109, 273, 595, 627, 984, 1107, 2708, 2777, 2853
PspOMI	GGGCCC	1 cut(s)	2706
PspPPI	RGGWCCY	2 cut(s)	594, 3061
PsuI	RGATCY	5 cut(s)	107, 361, 466, 1885, 1973
PsyI	GACNNNGTC	1 cut(s)	493
PvuI	CGATCG	1 cut(s)	865
PvuII	CAGCTG	1 cut(s)	443
RseI	CAYNNNNRTG	1 cut(s)	3131
SacI	GAGCTC	3 cut(s)	195, 454, 2967
SalI	GTCGAC	1 cut(s)	776
SapI	GCTCTTC	1 cut(s)	1470
ScaI	AGTACT	2 cut(s)	1235, 2084
SchI	GAGTC	6 cut(s)	503, 779, 965, 1220, 1328, 3110
ScrFI	CCNGG	4 cut(s)	126, 1527, 2348, 2849
SduI	GDGCHC	8 cut(s)	29, 195, 454, 1652, 1704, 1727, 2710, 2967
SfaNI	GCATC	7 cut(s)	475, 553, 657, 1624, 2211, 2266, 2815
SfcI	CTRYAG	3 cut(s)	1237, 1311, 2418
SinI	GGWCC	5 cut(s)	128, 594, 1086, 1911, 3061
SmiMI	CAYNNNNRTG	1 cut(s)	3131
SmlI	CTYRAG	8 cut(s)	68, 245, 386, 1703, 2086, 2099, 2977, 3065
SmoI	CTYRAG	8 cut(s)	68, 245, 386, 1703, 2086, 2099, 2977, 3065
Sse9I	AATT	9 cut(s)	212, 553, 956, 2372, 2510, 2595, 2735, 2954, 3091
SseBI	AGGCCT	1 cut(s)	1330
SspMI	CTAG	6 cut(s)	1332, 1362, 1983, 2507, 2921, 3015
SstI	GAGCTC	3 cut(s)	195, 454, 2967
StuI	AGGCCT	1 cut(s)	1330
StyD4I	CCNGG	4 cut(s)	124, 1525, 2346, 2847
StyI	CCWWGG	5 cut(s)	18, 612, 762, 2154, 2710
TaaI	ACNGT	3 cut(s)	1238, 1247, 3130
TaiI	ACGT	7 cut(s)	117, 153, 318, 932, 2116, 2302, 2658
TaqII	GACCGA	1 cut(s)	506
TasI	AATT	9 cut(s)	212, 553, 956, 2372, 2510, 2595, 2735, 2954, 3091
TatI	WGTACW	5 cut(s)	216, 1233, 2076, 2082, 3048
TauI	GCSGC	8 cut(s)	260, 609, 908, 1031, 1099, 1141, 1438, 2902
TfiI	GAWTC	9 cut(s)	506, 841, 1058, 1550, 2062, 2129, 2150, 2223, 2336
TscAI	CASTG	5 cut(s)	109, 1727, 2167, 2670, 2955
TseFI	GTSAC	3 cut(s)	1036, 1223, 2687
Tsp45I	GTSAC	3 cut(s)	1036, 1223, 2687
TspGWI	ACGGA	2 cut(s)	1082, 2565
TspRI	CASTG	5 cut(s)	109, 1727, 2167, 2670, 2955
Tth111I	GACNNNGTC	1 cut(s)	493
Vha464I	CTTAAG	4 cut(s)	245, 386, 2086, 2977
VpaK11BI	GGWCC	5 cut(s)	128, 594, 1086, 1911, 3061
XapI	RAATTY	3 cut(s)	956, 2510, 2954
XbaI	TCTAGA	1 cut(s)	2506
XmiI	GTMKAC	1 cut(s)	777
XmnI	GAANNNNTTC	2 cut(s)	363, 2024
XspI	CTAG	6 cut(s)	1332, 1362, 1983, 2507, 2921, 3015
ZraI	GACGTC	1 cut(s)	930
ZrmI	AGTACT	2 cut(s)	1235, 2084
Zsp2I	ATGCAT	3 cut(s)	2204, 2281, 2830

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.