Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0003471

Physical Location & Seq

Genomic Coordinates Forward (+)

661402 .. 665485

Gene Structure 4084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G000830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2547 bp

ATGGCGGCTCGGGAACCCGAGGACGAGAAAAGCTGGCAGGAGCTACTCAGAAAGATGCTGCCTTCCGGCGTGCCGTTGCCGGACGACGACCATCTCGACTACTCCATCGCAGTTGAGTACGAAGGCCCTCCGCTGCCCTACGAAGTCCCCAAGGTTGATCCAGTCGACATCGACTCGCTTCACACCGCTGCTTCCGGGGCTTCGGGTTCGGAGCTTTCTTCGATTCCGGTGGCCGAGCCGGTCGATCGGGACGCCTCTCGGTTCAGCCGGATCAGGAACGGCGACGCCGCAAACGAAACGCAGACTTCGACGTCGTTTTCGGTAGGTTTCAGCTCTGAATTTTCAGCTCAGGACTCGAACTCGGAGCCGAAACCGGTCGAGGACGACGCCGGAGGAGGAAAGAGAGCGGCGGTCGTGACTTTCAACACGCCGAGAGAATCGGAGACGGAAGACGACGGCGACCGGTCCTCGTCGCCGCAATCGGAGCCGGTGGGGTCGCCGGTAGCTTGGGCCTCGCCGCTGAAGGTAGCGAGTAAGAGAGGGATTTGCAGCAGGTGTGGAAAAGGGAACAGATTGAAGGAGAGGGAGTGGTGCTTGGTGTGTGACTCAAAGTACTGTAGCAACTGTTTGCTTAAAGCTATGGGATCAATGCCGGAGGGGCGAAAATGTGTGAGCTGCATTGGGCAGCCAATAGATGAGTCCAAGAGGCCTAGTTTGGGCAAGTGTTCAAAGCTTCTTTCTAGGGTTTGTAGTCCTTTGGAGATTGGGCAGATAATGAGGGCCGAGAAGGAGTGTCCGGCCAATCAGCTCCGGCCGCAGCAGTTGGTTGTGAATGGGAGGGAGTTGAGGGAAGAAGAGCTGGGTGAGATTTTGGGATGTCAAGTACCTCCTCAGAAGTTGAAGCCTGGGAGGTACTGGTACGATAAGGATTCGGGCCTCTGGGGAAAGGAGGGAGAGAAGCCTGATTGTATCATTACTCCGAAACTGAATGTTGGGGGTAAGCTTCGGGCTGATGCCAGCAATGGGAACACTAATGTATTCATGAATGGCAGAGAGATCACAAAGATTGAGCTTAGGGTGCTCAAGCTGGCTAAAGTGCAGTGCCCTCCAGATACTCATTTCTGGGTGTATGAAGATGGTACATATGAGGAGGAAGGGCAGAATAACATCAAAGGAAACATATGGGGAAAGGCAACCACCCGTTTCATTTGTTCATTATTCTCATTGCCTGTACCATCTCGTAATCAAAATGGGGCAAGAGAAGATCCTATGACACAACCTTCAAGTAGGTCCATCCCTGAATACTTGGATCAAGCAAGAGTTCAAAAACTTTTGTTATTTGGTCTGGAGGGATCTGGAACTAGCACCATCTTCAAGCAGGCCAAGTTCTTATATGGGAACGAGTTCACTCCCGAGGAGGTGCAGAACATGAAGCTCATGATTCAAAGTAATATGTACAAGTACTTAAGTATATTACTTGAGGGCCGAGAACGTTTTGAAGAGGAAGCTTCATTGCAGAATACTTCTGATTCCTTGGCCACTGACGAGACGCCATCAGTAGTCGATGGAAGTAAGCAATGCATCTATTCTATCAACCAAAGATTCAAGCACTTTTCTGACTGGTTGCTGGATATCATGGCAACCGGAGACTTGGATGCATTCTTCCCTGCTGCTACACGTGAGTATGCTCCTATTGTAGATGAAGTATGGAAAGATTCTGCCATCCAGGAAACATACAAAAGAAGGGAGGAATTACATTGTCTTCCAGAAGTTGCCAAGTATTTCTTAGATCGGGCTATAGAAATATCAAGTAATGAGTATGAGCCAACCGAGAAGGACATTTTATATGCTGAAGGAGTTACTCAAAGCAATGGCCTTACCTCTCTAGAATTTTCATTTGATGATAGAAGCTCCATGTCTGAGCTATACAACGAAAACTATGAATGCCCCCTTCCGTTAACCAAGTACCAACTAATTTGTCTTAGTTCTAAGGGACTAAATGAGGGGTGCAAATGGCTTGCAATGTTTGAAGACGTGAGGGCAGTGATTTTTTGTGTTGCTTTGAGTGACTATGATCAAATGTGGGCCCTTGGTAATGGGCGTCTTCATAATAAATTGCTGGCAAGCAGAGATTTGTTCGAGAGTTTGGTGAGGCACCCTTGTTTTAGTAACACTCCATTTGTTCTTGTGCTGAACAAATATGATGCATTTGAAGACAAGATAGGCCAGGTTCCATTGTCAGCTTGTGAGTGGTTCAATGACTTCAACCCTGTTAAGCCACACAATAATAGTCAGGCTCTAGCTCAGCAAGCATATTACTATGTGGCAGTGAAATTCAAAGAGCTCTATTTATCCTTAAGCGGTCAAAAGTTATTTGTAGTGCAAACCCGAGCTAGAGATGGTAACTCGGTTGATGTGGCATTCAAGTACATAAGGGAGGTCCTCAAGTGGGATGAAGAAAAGGATGATAATTTCTTTGGAATTAATGGGGATGACTCCTATTTCAGTACAGAAATGAGTTCTTCTCCAAATCTCAGACAAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04015 ko04022 ko04024 ko04062 ko04071 ko04261 ko04360 ko04371 ko04540 ko04611 ko04670 ko04713 ko04723 ko04724 ko04725 ko04726 ko04727 ko04728 ko04730 ko04914 ko04915 ko04916 ko04921 ko04923 ko04924 ko04926 ko04934 ko04971 ko05012 ko05030 ko05032 ko05034 ko05133 ko05142 ko05145 ko05200 map04015 map04022 map04024 map04062 map04071 map04261 map04360 map04371 map04540 map04611 map04670 map04713 map04723 map04724 map04725 map04726 map04727 map04728 map04730 map04914 map04915 map04916 map04921 map04923 map04924 map04926 map04934 map04971 map05012 map05030 map05032 map05034 map05133 map05142 map05145 map05200

Pfam Domains

Protein Families

G-alpha

Protein Analysis

848

Amino Acids

95.27

Weight (kDa)

4.94

Isoelectric Point (pI)

46.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-alpha	PF00503	439 - 814	2.7e-72	G-protein alpha subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003471)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17740 FvH4_5g17740
malus_domestica	MD06G1232900.v1.1 MD14G1239900.v1.1
prunus_persica	Prupe.5G237500_v2.0.a1 Prupe.5G237500_v2.0.a1
pyrus_communis	pycom06g20790 pycom14g20150
rosa_chinensis	RchiOBHm_Chr5g0016271 RchiOBHm_Chr7g0177881
rosa_laevigata	RLG00000003463 RLG00000005494 RLG00000019305 RLG00000035269
rosa_multiflora	Rmu_sc0000141.1_g000001 Rmu_sc0004510.1_g000005 Rmu_sc0006214.1_g000003 Rmu_sc0006997.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129380 Rroxscaffold_3G00275470
rosa_rugosa	Rorug04G0425800 Rorug06G0410700 Rorug06G0410800
rosa_samantha	Rh1CG219000 Rh4CG242300 Rh5AG324200 Rh5CG136200 Rh7AG009900 Rh7AG127600 Rh7BG010000 Rh7BG128600 Rh7BG129500 Rh7CG130400 Rh7CG131800 Rh7DG010000
rosa_wichuraiana	Rw7G000830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	543
AasI	GACNNNNNNGTC	1 cut(s)	310
AatII	GACGTC	1 cut(s)	314
Acc36I	ACCTGC	1 cut(s)	543
AccB1I	GGYRCC	1 cut(s)	2154
AccBSI	CCGCTC	1 cut(s)	407
AccI	GTMKAC	1 cut(s)	165
AclI	AACGTT	1 cut(s)	1492
AclWI	GGATC	6 cut(s)	152, 278, 652, 1259, 1317, 1360
AcoI	YGGCCR	4 cut(s)	231, 798, 812, 1536
AcsI	RAATTY	3 cut(s)	338, 1889, 2333
AcuI	CTGAAG	2 cut(s)	542, 1872
AcvI	CACGTG	1 cut(s)	1679
AcyI	GRCGYC	6 cut(s)	252, 285, 311, 387, 1550, 2101
AfiI	CCNNNNNNNGG	3 cut(s)	716, 1023, 2449
AflII	CTTAAG	2 cut(s)	1465, 2356
AflIII	ACRYGT	1 cut(s)	1676
AgeI	ACCGGT	2 cut(s)	373, 462
AjiI	CACGTC	1 cut(s)	2035
AjnI	CCWGG	3 cut(s)	904, 1725, 2226
Alw21I	GWGCWC	2 cut(s)	1083, 2346
Alw26I	GTCTC	3 cut(s)	437, 1541, 1641
AlwI	GGATC	6 cut(s)	152, 278, 652, 1259, 1317, 1360
Ama87I	CYCGRG	4 cut(s)	9, 17, 1412, 2388
ApaI	GGGCCC	1 cut(s)	2089
ApeKI	GCWGC	8 cut(s)	58, 133, 188, 549, 675, 685, 817, 1670
ApoI	RAATTY	3 cut(s)	338, 1889, 2333
ArsI	GACNNNNNNTTYG	2 cut(s)	301, 333
AseI	ATTAAT	1 cut(s)	2484
AsiGI	ACCGGT	2 cut(s)	373, 462
Asp700I	GAANNNNTTC	1 cut(s)	1403
AsuC2I	CCSGG	1 cut(s)	196
AsuHPI	GGTGA	2 cut(s)	875, 2161
AvaI	CYCGRG	4 cut(s)	9, 17, 1412, 2388
AvaII	GGWCC	3 cut(s)	465, 1290, 2440
BaeGI	GKGCMC	2 cut(s)	1106, 2089
BalI	TGGCCA	1 cut(s)	1538
BanI	GGYRCC	1 cut(s)	2154
BanII	GRGCYC	2 cut(s)	2089, 2346
BbrPI	CACGTG	1 cut(s)	1679
BbsI	GAAGAC	5 cut(s)	456, 1754, 2037, 2096, 2220
Bbv12I	GWGCWC	2 cut(s)	1083, 2346
BbvI	GCAGC	8 cut(s)	45, 120, 175, 561, 662, 697, 829, 1657
BceAI	ACGGC	3 cut(s)	58, 295, 472
BciT130I	CCWGG	3 cut(s)	906, 1727, 2228
BclI	TGATCA	1 cut(s)	2074
BcnI	CCSGG	1 cut(s)	196
BcoDI	GTCTC	3 cut(s)	437, 1541, 1641
BfaI	CTAG	6 cut(s)	711, 741, 1362, 1886, 2300, 2394
BfmI	CTRYAG	2 cut(s)	616, 1797
BfrI	CTTAAG	2 cut(s)	1465, 2356
BfuAI	ACCTGC	1 cut(s)	543
BglI	GCCNNNNNGGC	1 cut(s)	658
BlpI	GCTNAGC	1 cut(s)	2304
BmcAI	AGTACT	2 cut(s)	614, 1463
Bme1390I	CCNGG	4 cut(s)	196, 906, 1727, 2228
Bme18I	GGWCC	3 cut(s)	465, 1290, 2440
BmeT110I	CYCGRG	4 cut(s)	9, 17, 1412, 2388
BmgBI	CACGTC	1 cut(s)	2035
BmiI	GGNNCC	6 cut(s)	15, 366, 486, 2087, 2156, 2232
BmrFI	CCNGG	4 cut(s)	196, 906, 1727, 2228
BmsI	GCATC	5 cut(s)	45, 1003, 1590, 1645, 2194
BpiI	GAAGAC	5 cut(s)	456, 1754, 2037, 2096, 2220
BplI	GAGNNNNNCTC	2 cut(s)	2509, 2541
BpmI	CTGGAG	2 cut(s)	1092, 1367
Bpu10I	CCTNAGC	2 cut(s)	348, 1073
Bpu1102I	GCTNAGC	1 cut(s)	2304
BpuEI	CTTGAG	3 cut(s)	1067, 1499, 2429
BpuMI	CCSGG	1 cut(s)	196
BsaAI	YACGTR	1 cut(s)	1679
BsaHI	GRCGYC	6 cut(s)	252, 285, 311, 387, 1550, 2101
BsaJI	CCNNGG	7 cut(s)	18, 150, 195, 905, 1413, 1533, 2089
BsaWI	WCCGGW	4 cut(s)	226, 373, 462, 1643
BsaXI	ACNNNNNCTCC	2 cut(s)	572, 602
Bsc4I	CCNNNNNNNGG	3 cut(s)	716, 1023, 2449
Bse118I	RCCGGY	5 cut(s)	238, 373, 462, 487, 499
Bse1I	ACTGG	3 cut(s)	161, 920, 1625
Bse3DI	GCAATG	6 cut(s)	1027, 1223, 1511, 1583, 1876, 2028
BseBI	CCWGG	3 cut(s)	906, 1727, 2228
BseDI	CCNNGG	7 cut(s)	18, 150, 195, 905, 1413, 1533, 2089
BseGI	GGATG	7 cut(s)	881, 1293, 1660, 1722, 2458, 2470, 2497
BseLI	CCNNNNNNNGG	3 cut(s)	716, 1023, 2449
BseMI	GCAATG	6 cut(s)	1027, 1223, 1511, 1583, 1876, 2028
BseMII	CTCAG	5 cut(s)	61, 362, 905, 1911, 2318
BseNI	ACTGG	3 cut(s)	161, 920, 1625
BseRI	GAGGAG	4 cut(s)	408, 879, 1163, 1430
BseSI	GKGCMC	2 cut(s)	1106, 2089
BseX3I	CGGCCG	1 cut(s)	812
BseXI	GCAGC	8 cut(s)	45, 120, 175, 561, 662, 697, 829, 1657
BseYI	CCCAGC	1 cut(s)	859
BsgI	GTGCAG	2 cut(s)	1118, 1442
Bsh1285I	CGRYCG	6 cut(s)	243, 247, 378, 414, 463, 815
BshNI	GGYRCC	1 cut(s)	2154
BshTI	ACCGGT	2 cut(s)	373, 462
BsiEI	CGRYCG	6 cut(s)	243, 247, 378, 414, 463, 815
BsiHKAI	GWGCWC	2 cut(s)	1083, 2346
BsiHKCI	CYCGRG	4 cut(s)	9, 17, 1412, 2388
BslFI	GGGAC	3 cut(s)	131, 263, 2007
BslI	CCNNNNNNNGG	3 cut(s)	716, 1023, 2449
BsmAI	GTCTC	3 cut(s)	437, 1541, 1641
BsmBI	CGTCTC	2 cut(s)	437, 1541
BsmFI	GGGAC	3 cut(s)	131, 263, 2007
BsmI	GAATGC	3 cut(s)	1658, 1949, 2420
BsoBI	CYCGRG	4 cut(s)	9, 17, 1412, 2388
Bsp120I	GGGCCC	1 cut(s)	2085
Bsp1286I	GDGCHC	4 cut(s)	1083, 1106, 2089, 2346
Bsp1407I	TGTACA	1 cut(s)	1455
Bsp1720I	GCTNAGC	1 cut(s)	2304
BspCNI	CTCAG	6 cut(s)	60, 361, 904, 1912, 2317, 2547
BspHI	TCATGA	2 cut(s)	1041, 1437
BspLI	GGNNCC	6 cut(s)	15, 366, 486, 2087, 2156, 2232
BspMI	ACCTGC	1 cut(s)	543
BspPI	GGATC	6 cut(s)	152, 278, 652, 1259, 1317, 1360
BspQI	GCTCTTC	1 cut(s)	849
BspT107I	GGYRCC	1 cut(s)	2154
BspTI	CTTAAG	2 cut(s)	1465, 2356
BsrBI	CCGCTC	1 cut(s)	407
BsrDI	GCAATG	6 cut(s)	1027, 1223, 1511, 1583, 1876, 2028
BsrFI	RCCGGY	5 cut(s)	238, 373, 462, 487, 499
BsrGI	TGTACA	1 cut(s)	1455
BsrI	ACTGG	3 cut(s)	161, 920, 1625
BssAI	RCCGGY	5 cut(s)	238, 373, 462, 487, 499
BssECI	CCNNGG	7 cut(s)	18, 150, 195, 905, 1413, 1533, 2089
BssNI	GRCGYC	6 cut(s)	252, 285, 311, 387, 1550, 2101
BssT1I	CCWWGG	3 cut(s)	150, 1533, 2089
Bst2UI	CCWGG	3 cut(s)	906, 1727, 2228
Bst4CI	ACNGT	2 cut(s)	617, 626
Bst6I	CTCTTC	2 cut(s)	849, 1494
BstACI	GRCGYC	6 cut(s)	252, 285, 311, 387, 1550, 2101
BstAFI	CTTAAG	2 cut(s)	1465, 2356
BstAUI	TGTACA	1 cut(s)	1455
BstBAI	YACGTR	1 cut(s)	1679
BstC8I	GCNNGC	9 cut(s)	35, 71, 1018, 1089, 1380, 2019, 2121, 2125, 2310
BstF5I	GGATG	7 cut(s)	881, 1293, 1660, 1722, 2458, 2470, 2497
BstMAI	GTCTC	3 cut(s)	437, 1541, 1641
BstMCI	CGRYCG	6 cut(s)	243, 247, 378, 414, 463, 815
BstMWI	GCNNNNNNNGC	6 cut(s)	197, 484, 658, 814, 1078, 2309
BstNI	CCWGG	3 cut(s)	906, 1727, 2228
BstSCI	CCNGG	4 cut(s)	194, 904, 1725, 2226
BstSFI	CTRYAG	2 cut(s)	616, 1797
BstSLI	GKGCMC	2 cut(s)	1106, 2089
BstV1I	GCAGC	8 cut(s)	45, 120, 175, 561, 662, 697, 829, 1657
BstV2I	GAAGAC	5 cut(s)	456, 1754, 2037, 2096, 2220
BstX2I	RGATCY	2 cut(s)	1264, 1352
BstYI	RGATCY	2 cut(s)	1264, 1352
BstZI	CGGCCG	1 cut(s)	812
BtgZI	GCGATG	1 cut(s)	91
BtrI	CACGTC	1 cut(s)	2035
BtsCI	GGATG	7 cut(s)	881, 1293, 1660, 1722, 2458, 2470, 2497
BtsI	GCAGTG	3 cut(s)	1106, 2049, 2334
BtsIMutI	CAGTG	4 cut(s)	1106, 1539, 2049, 2334
BveI	ACCTGC	1 cut(s)	543
Cac8I	GCNNGC	9 cut(s)	35, 71, 1018, 1089, 1380, 2019, 2121, 2125, 2310
CciI	TCATGA	2 cut(s)	1041, 1437
Cfr10I	RCCGGY	5 cut(s)	238, 373, 462, 487, 499
CseI	GACGC	5 cut(s)	260, 293, 395, 1558, 2090
CspAI	ACCGGT	2 cut(s)	373, 462
CviAII	CATG	5 cut(s)	1042, 1429, 1438, 1636, 1915
DrdI	GACNNNNNNGTC	1 cut(s)	310
DseDI	GACNNNNNNGTC	1 cut(s)	310
EaeI	YGGCCR	4 cut(s)	231, 798, 812, 1536
EagI	CGGCCG	1 cut(s)	812
Eam1104I	CTCTTC	2 cut(s)	849, 1494
EarI	CTCTTC	2 cut(s)	849, 1494
Ecl136II	GAGCTC	1 cut(s)	2344
EclXI	CGGCCG	1 cut(s)	812
Eco130I	CCWWGG	3 cut(s)	150, 1533, 2089
Eco147I	AGGCCT	1 cut(s)	709
Eco24I	GRGCYC	2 cut(s)	2089, 2346
Eco32I	GATATC	1 cut(s)	1633
Eco47I	GGWCC	3 cut(s)	465, 1290, 2440
Eco52I	CGGCCG	1 cut(s)	812
Eco53kI	GAGCTC	1 cut(s)	2344
Eco57I	CTGAAG	2 cut(s)	542, 1872
Eco72I	CACGTG	1 cut(s)	1679
Eco88I	CYCGRG	4 cut(s)	9, 17, 1412, 2388
EcoICRI	GAGCTC	1 cut(s)	2344
EcoO109I	RGGNCCY	3 cut(s)	125, 2086, 2440
EcoRII	CCWGG	3 cut(s)	904, 1725, 2226
EcoRV	GATATC	1 cut(s)	1633
EcoT14I	CCWWGG	3 cut(s)	150, 1533, 2089
EcoT22I	ATGCAT	3 cut(s)	1583, 1660, 2209
EcoT38I	GRGCYC	2 cut(s)	2089, 2346
ErhI	CCWWGG	3 cut(s)	150, 1533, 2089
Esp3I	CGTCTC	2 cut(s)	437, 1541
FaeI	CATG	5 cut(s)	1045, 1432, 1441, 1639, 1918
FalI	AAGNNNNNCTT	2 cut(s)	1769, 1801
FaqI	GGGAC	3 cut(s)	131, 263, 2007
FatI	CATG	5 cut(s)	1041, 1428, 1437, 1635, 1914
FauNDI	CATATG	2 cut(s)	1144, 1181
FbaI	TGATCA	1 cut(s)	2074
FblI	GTMKAC	1 cut(s)	165
FokI	GGATG	7 cut(s)	888, 1280, 1667, 1709, 2465, 2477, 2504
FriOI	GRGCYC	2 cut(s)	2089, 2346
FspBI	CTAG	6 cut(s)	711, 741, 1362, 1886, 2300, 2394
GsaI	CCCAGC	1 cut(s)	863
GsuI	CTGGAG	2 cut(s)	1092, 1367
HgaI	GACGC	5 cut(s)	260, 293, 395, 1558, 2090
Hin1I	GRCGYC	6 cut(s)	252, 285, 311, 387, 1550, 2101
Hin1II	CATG	5 cut(s)	1045, 1432, 1441, 1639, 1918
HincII	GTYRAC	2 cut(s)	166, 1959
HindII	GTYRAC	2 cut(s)	166, 1959
HindIII	AAGCTT	3 cut(s)	731, 1001, 1506
HpaI	GTTAAC	1 cut(s)	1959
HphI	GGTGA	2 cut(s)	875, 2161
Hpy166II	GTNNAC	3 cut(s)	166, 1407, 1959
Hpy8I	GTNNAC	3 cut(s)	166, 1407, 1959
Hpy99I	CGWCG	7 cut(s)	89, 287, 313, 316, 389, 458, 475
HpyCH4III	ACNGT	2 cut(s)	617, 626
HpyCH4IV	ACGT	4 cut(s)	311, 1492, 1678, 2034
HpyF10VI	GCNNNNNNNGC	6 cut(s)	197, 484, 658, 814, 1078, 2309
HpySE526I	ACGT	4 cut(s)	311, 1492, 1678, 2034
Hsp92I	GRCGYC	6 cut(s)	252, 285, 311, 387, 1550, 2101
Hsp92II	CATG	5 cut(s)	1045, 1432, 1441, 1639, 1918
Ksp22I	TGATCA	1 cut(s)	2074
KspAI	GTTAAC	1 cut(s)	1959
LguI	GCTCTTC	1 cut(s)	849
LmnI	GCTCC	7 cut(s)	40, 211, 364, 484, 813, 1693, 1916
Lsp1109I	GCAGC	8 cut(s)	45, 120, 175, 561, 662, 697, 829, 1657
LweI	GCATC	5 cut(s)	45, 1003, 1590, 1645, 2194
MaeI	CTAG	6 cut(s)	711, 741, 1362, 1886, 2300, 2394
MaeII	ACGT	4 cut(s)	311, 1492, 1678, 2034
MaeIII	GTNAC	6 cut(s)	415, 602, 1858, 2066, 2168, 2402
MbiI	CCGCTC	1 cut(s)	407
MflI	RGATCY	2 cut(s)	1264, 1352
MhlI	GDGCHC	4 cut(s)	1083, 1106, 2089, 2346
MlsI	TGGCCA	1 cut(s)	1538
MluCI	AATT	8 cut(s)	338, 1751, 1889, 1974, 2114, 2333, 2470, 2481
MluNI	TGGCCA	1 cut(s)	1538
MlyI	GAGTC	5 cut(s)	167, 347, 599, 707, 2489
Mox20I	TGGCCA	1 cut(s)	1538
Mph1103I	ATGCAT	3 cut(s)	1583, 1660, 2209
MroXI	GAANNNNTTC	1 cut(s)	1403
MscI	TGGCCA	1 cut(s)	1538
MseI	TTAA	6 cut(s)	633, 1466, 1958, 2274, 2357, 2484
Msp20I	TGGCCA	1 cut(s)	1538
MspA1I	CMGCKG	3 cut(s)	133, 188, 520
MspCI	CTTAAG	2 cut(s)	1465, 2356
MspR9I	CCNGG	4 cut(s)	196, 906, 1727, 2228
Mva1269I	GAATGC	3 cut(s)	1658, 1949, 2420
MvaI	CCWGG	3 cut(s)	906, 1727, 2228
MwoI	GCNNNNNNNGC	6 cut(s)	197, 484, 658, 814, 1078, 2309
NciI	CCSGG	1 cut(s)	196
NdeI	CATATG	2 cut(s)	1144, 1181
NlaIII	CATG	5 cut(s)	1045, 1432, 1441, 1639, 1918
NlaIV	GGNNCC	6 cut(s)	15, 366, 486, 2087, 2156, 2232
NmeAIII	GCCGAG	4 cut(s)	259, 456, 808, 1511
NmuCI	GTSAC	3 cut(s)	415, 602, 2066
NsiI	ATGCAT	3 cut(s)	1583, 1660, 2209
PagI	TCATGA	2 cut(s)	1041, 1437
PaqCI	CACCTGC	1 cut(s)	543
PceI	AGGCCT	1 cut(s)	709
PciSI	GCTCTTC	1 cut(s)	849
PcsI	WCGNNNNNNNCGW	3 cut(s)	93, 291, 305
PctI	GAATGC	3 cut(s)	1658, 1949, 2420
PdmI	GAANNNNTTC	1 cut(s)	1403
PfeI	GAWTC	7 cut(s)	223, 437, 929, 1441, 1529, 1602, 1715
PfoI	TCCNGGA	1 cut(s)	1725
PinAI	ACCGGT	2 cut(s)	373, 462
Ple19I	CGATCG	1 cut(s)	247
PleI	GAGTC	5 cut(s)	167, 347, 599, 706, 2489
PmaCI	CACGTG	1 cut(s)	1679
PmlI	CACGTG	1 cut(s)	1679
PpsI	GAGTC	5 cut(s)	167, 347, 599, 706, 2489
Ppu21I	YACGTR	1 cut(s)	1679
PpuMI	RGGWCCY	1 cut(s)	2440
PshBI	ATTAAT	1 cut(s)	2484
Psp124BI	GAGCTC	1 cut(s)	2346
Psp1406I	AACGTT	1 cut(s)	1492
Psp5II	RGGWCCY	1 cut(s)	2440
Psp6I	CCWGG	3 cut(s)	904, 1725, 2226
PspCI	CACGTG	1 cut(s)	1679
PspFI	CCCAGC	1 cut(s)	859
PspGI	CCWGG	3 cut(s)	904, 1725, 2226
PspN4I	GGNNCC	6 cut(s)	15, 366, 486, 2087, 2156, 2232
PspOMI	GGGCCC	1 cut(s)	2085
PspPPI	RGGWCCY	1 cut(s)	2440
PsuI	RGATCY	2 cut(s)	1264, 1352
PvuI	CGATCG	1 cut(s)	247
SacI	GAGCTC	1 cut(s)	2346
SalI	GTCGAC	1 cut(s)	164
SapI	GCTCTTC	1 cut(s)	849
SaqAI	TTAA	6 cut(s)	633, 1466, 1958, 2274, 2357, 2484
ScaI	AGTACT	2 cut(s)	614, 1463
SchI	GAGTC	5 cut(s)	167, 347, 599, 707, 2489
ScrFI	CCNGG	4 cut(s)	196, 906, 1727, 2228
SduI	GDGCHC	4 cut(s)	1083, 1106, 2089, 2346
SfaNI	GCATC	5 cut(s)	45, 1003, 1590, 1645, 2194
SfcI	CTRYAG	2 cut(s)	616, 1797
SinI	GGWCC	3 cut(s)	465, 1290, 2440
SmlI	CTYRAG	5 cut(s)	1082, 1465, 1478, 2356, 2444
SmoI	CTYRAG	5 cut(s)	1082, 1465, 1478, 2356, 2444
Sse9I	AATT	8 cut(s)	338, 1751, 1889, 1974, 2114, 2333, 2470, 2481
SseBI	AGGCCT	1 cut(s)	709
SspMI	CTAG	6 cut(s)	711, 741, 1362, 1886, 2300, 2394
SstI	GAGCTC	1 cut(s)	2346
StuI	AGGCCT	1 cut(s)	709
StyD4I	CCNGG	4 cut(s)	194, 904, 1725, 2226
StyI	CCWWGG	3 cut(s)	150, 1533, 2089
TaaI	ACNGT	2 cut(s)	617, 626
TaiI	ACGT	4 cut(s)	314, 1495, 1681, 2037
TasI	AATT	8 cut(s)	338, 1751, 1889, 1974, 2114, 2333, 2470, 2481
TatI	WGTACW	5 cut(s)	612, 1455, 1461, 2427, 2507
TauI	GCSGC	6 cut(s)	8, 290, 410, 478, 520, 817
TfiI	GAWTC	7 cut(s)	223, 437, 929, 1441, 1529, 1602, 1715
Tru1I	TTAA	6 cut(s)	633, 1466, 1958, 2274, 2357, 2484
Tru9I	TTAA	6 cut(s)	633, 1466, 1958, 2274, 2357, 2484
TscAI	CASTG	4 cut(s)	1106, 1546, 2049, 2334
TseFI	GTSAC	3 cut(s)	415, 602, 2066
TseI	GCWGC	8 cut(s)	58, 133, 188, 549, 675, 685, 817, 1670
Tsp45I	GTSAC	3 cut(s)	415, 602, 2066
TspGWI	ACGGA	2 cut(s)	461, 1944
TspRI	CASTG	4 cut(s)	1106, 1546, 2049, 2334
Vha464I	CTTAAG	2 cut(s)	1465, 2356
VpaK11BI	GGWCC	3 cut(s)	465, 1290, 2440
VspI	ATTAAT	1 cut(s)	2484
XapI	RAATTY	3 cut(s)	338, 1889, 2333
XbaI	TCTAGA	1 cut(s)	1885
XmiI	GTMKAC	1 cut(s)	165
XmnI	GAANNNNTTC	1 cut(s)	1403
XspI	CTAG	6 cut(s)	711, 741, 1362, 1886, 2300, 2394
ZraI	GACGTC	1 cut(s)	312
ZrmI	AGTACT	2 cut(s)	614, 1463
Zsp2I	ATGCAT	3 cut(s)	1583, 1660, 2209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.