Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003471

Physical Location & Seq

Genomic Coordinates Reverse (-)

58502057 .. 58504903

Gene Structure 2847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0425800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGACTCCAAGTCGGTGCGGTTCTTGACCCACCAGTCCTTCTTCTCCGCCGTTCGATCCGGCGACCTCGAGTCGGTGACGCAGCTGGTGGAGAAGCTCGCCAAGGACGGCGAGCCGTCGTCGTCCGCCGTGGCTGATCTGATGGCGATGAAGAACGACGCAGGCGAGACGGCGCTGTACGTGGCCGCAGACAATAATAATCTGGAGGAGGTGTTTGCCTACTTGCTCAAGTTCTGTGATGTGGAGGTTGCCAAGATCAGGAGCAAGCTTGATATGAATGCTTTTCATGTTGCTGCTAAGAAAGGCCATTTGGGTATTGTGAAGGCGCTGCTGGCAAAATGGCCTGAGCTGTGTAAAGTGTGTGACTCGTCAAACACTAGCCCTCTTTATTCAGCTGCTATTCAGGAGCATTTGGATGTAGTCAACACCATCTTGGATGTGGACATCAGCTCAATGAGGATTGTGAGGAAAAATGGTAAAACTGCATTACATACAGCTGCAAGGTATGGGTACCTCAAGATTGGGGAAGCGCTTATTGATAGAGATCCTGAAATAGTGTGTATAAAGGATAAAAAGGGTCAAACTGCACTCCATATGGCTGTAAAAGGTGACTGCACTTCAATTGTAGAGGACATATTACTTGCTGATCACTCTATACTTAACGAACGTGACAAGAAAGGCAATACCGCTTTGCATATGGCGACAAGGAAATGCCGTCCAGAGATAGTGAGCCTTCTGTTGAGTTTCAAGGATACTGATGTCAATGCAATCAATAATCATTACGAAACTGCCATGGATTTGGCAGATAAACTACAATATGGAGGTCCTCGATCAGAAATTATAGAAGCACTGGCGGAAGTTGGTGGCAAGTATGCAAGACATGTTGGCCAAGTTGATGAAGCAATGTTACTCAAGAGAACTGTGAGTGATATTAAGCATGAGGTGCACTCACAGTTGATACAAAATGAAACAACTCGGCGAAGAGTTTCTGGTATTGCCAAAGAACTAAAGAAACTTCATAGAGAAGCTGTCCAGAACACTACCAATTCTATCACAGTCGTTGCTGTTCTTTTTGCTTCGATAGCCTTCTTGGCCATATTTAACTTGCCTGGCCAATATTTCGAAACAGGGAAGGCTAAAATAGCCGATGAAGTTGGTTTCCAAGTGTTCTACCTATTGAATGCCACAGCTCTCTTCATTTCTCTGGCGGTCGTTGTGGTTCAGATCACTTTGGTGGCTTGGGACACAAGGGCTCAGCAGCAAGTTGTGTCAGTGGTCAACAAACTAATGTGGGTTGCTTGTGCATGCACTTGCGGAGCTTTTCTGTCGATAGCTTTCGTGATTGTTGGAAAAGGTAGTTCATGGATGGCCGTTACAATAACAGCTGTGGGAGCACCAATCCTCATTGGCACTCTTGCAAGCATGTGCTACTTTGTTTTCCGACAACACTTTGGGTCTTTCCGGCGTGACTCTCAGAGAAACATCAGAAGGGCGAGTGGAAGCAAGTCGTTCTCCTGGTCCTACTCTGCAAATATCTCAGATCTCGACGATGAATACAACTCCGACCTTGAGAAAATCTATGCTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04015 ko04022 ko04024 ko04062 ko04071 ko04261 ko04360 ko04371 ko04540 ko04611 ko04670 ko04713 ko04723 ko04724 ko04725 ko04726 ko04727 ko04728 ko04730 ko04914 ko04915 ko04916 ko04921 ko04923 ko04924 ko04926 ko04934 ko04971 ko05012 ko05030 ko05032 ko05034 ko05133 ko05142 ko05145 ko05200 map04015 map04022 map04024 map04062 map04071 map04261 map04360 map04371 map04540 map04611 map04670 map04713 map04723 map04724 map04725 map04726 map04727 map04728 map04730 map04914 map04915 map04916 map04921 map04923 map04924 map04926 map04934 map04971 map05012 map05030 map05032 map05034 map05133 map05142 map05145 map05200

Pfam Domains

Protein Families

G-alpha

Protein Analysis

529

Amino Acids

58.27

Weight (kDa)

7.59

Isoelectric Point (pI)

28.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	16 - 112	2.9e-10	Ankyrin repeats (3 copies)
Ank_5	PF13857	91 - 129	9.5e-06	Ankyrin repeats (many copies)
Ank_2	PF12796	120 - 185	4.7e-08	Ankyrin repeats (3 copies)
Ank_2	PF12796	189 - 256	2.2e-11	Ankyrin repeats (3 copies)
PGG	PF13962	342 - 446	5.8e-24	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003471)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17740 FvH4_5g17740
malus_domestica	MD06G1232900.v1.1 MD14G1239900.v1.1
prunus_persica	Prupe.5G237500_v2.0.a1 Prupe.5G237500_v2.0.a1
pyrus_communis	pycom06g20790 pycom14g20150
rosa_chinensis	RchiOBHm_Chr5g0016271 RchiOBHm_Chr7g0177881
rosa_laevigata	RLG00000003463 RLG00000005494 RLG00000019305 RLG00000035269
rosa_multiflora	Rmu_sc0000141.1_g000001 Rmu_sc0004510.1_g000005 Rmu_sc0006214.1_g000003 Rmu_sc0006997.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129380 Rroxscaffold_3G00275470
rosa_rugosa	Rorug04G0425800 Rorug06G0410700 Rorug06G0410800
rosa_samantha	Rh1CG219000 Rh4CG242300 Rh5AG324200 Rh5CG136200 Rh7AG009900 Rh7AG127600 Rh7BG010000 Rh7BG128600 Rh7BG129500 Rh7CG130400 Rh7CG131800 Rh7DG010000
rosa_wichuraiana	Rw7G000830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	34
Acc65I	GGTACC	1 cut(s)	510
AccB1I	GGYRCC	1 cut(s)	510
AciI	CCGC	8 cut(s)	19, 48, 126, 186, 687, 854, 1208, 1314
AclWI	GGATC	2 cut(s)	51, 539
AcoI	YGGCCR	5 cut(s)	183, 886, 1092, 1111, 1368
AfaI	GTAC	2 cut(s)	179, 512
AfeI	AGCGCT	1 cut(s)	531
AfiI	CCNNNNNNNGG	2 cut(s)	73, 258
AflIII	ACRYGT	1 cut(s)	880
AgsI	TTSAA	3 cut(s)	621, 748, 1180
AhdI	GACNNNNNGTC	2 cut(s)	10, 70
AjnI	CCWGG	2 cut(s)	1108, 1514
AjuI	GAANNNNNNNTTGG	2 cut(s)	293, 325
AleI	CACNNNNGTG	1 cut(s)	1232
Alw21I	GWGCWC	2 cut(s)	948, 1396
Alw26I	GTCTC	1 cut(s)	161
Alw44I	GTGCAC	1 cut(s)	944
AlwI	GGATC	2 cut(s)	51, 539
Ama87I	CYCGRG	1 cut(s)	68
Aor51HI	AGCGCT	1 cut(s)	531
AoxI	GGCC	7 cut(s)	183, 304, 341, 886, 1092, 1111, 1368
ApaLI	GTGCAC	1 cut(s)	944
ApeKI	GCWGC	6 cut(s)	82, 293, 328, 395, 497, 1258
Asp700I	GAANNNNTTC	1 cut(s)	985
Asp718I	GGTACC	1 cut(s)	510
AspLEI	GCGC	3 cut(s)	175, 328, 532
AspS9I	GGNCC	2 cut(s)	824, 1518
AsuHPI	GGTGA	2 cut(s)	88, 620
AsuII	TTCGAA	1 cut(s)	1122
AvaI	CYCGRG	1 cut(s)	68
AvaII	GGWCC	2 cut(s)	824, 1518
BaeGI	GKGCMC	1 cut(s)	948
BaeI	ACNNNNGTAYC	2 cut(s)	744, 777
BalI	TGGCCA	3 cut(s)	888, 1094, 1113
BanI	GGYRCC	1 cut(s)	510
BanII	GRGCYC	1 cut(s)	1255
BarI	GAAGNNNNNNTAC	2 cut(s)	891, 923
Bbv12I	GWGCWC	2 cut(s)	948, 1396
BbvI	GCAGC	6 cut(s)	94, 280, 315, 382, 484, 1270
BccI	CCATC	3 cut(s)	136, 437, 1360
BceAI	ACGGC	7 cut(s)	35, 100, 113, 124, 186, 699, 1355
BciT130I	CCWGG	2 cut(s)	1110, 1516
BciVI	GTATCC	1 cut(s)	745
BclI	TGATCA	1 cut(s)	646
BcoDI	GTCTC	1 cut(s)	161
BfaI	CTAG	1 cut(s)	378
BfoI	RGCGCY	3 cut(s)	176, 329, 533
BfuI	GTATCC	1 cut(s)	745
BglI	GCCNNNNNGGC	1 cut(s)	1091
BglII	AGATCT	1 cut(s)	1540
BisI	GCNGC	7 cut(s)	83, 186, 294, 329, 396, 498, 1259
BlpI	GCTNAGC	1 cut(s)	1254
BlsI	GCNGC	7 cut(s)	84, 187, 295, 330, 397, 499, 1260
Bme1390I	CCNGG	2 cut(s)	1110, 1516
Bme18I	GGWCC	2 cut(s)	824, 1518
BmeRI	GACNNNNNGTC	2 cut(s)	10, 70
BmeT110I	CYCGRG	1 cut(s)	68
BmgT120I	GGNCC	2 cut(s)	824, 1518
BmiI	GGNNCC	1 cut(s)	512
BmrFI	CCNGG	2 cut(s)	1110, 1516
BplI	GAGNNNNNCTC	2 cut(s)	932, 964
BpmI	CTGGAG	1 cut(s)	224
Bpu10I	CCTNAGC	1 cut(s)	345
Bpu1102I	GCTNAGC	1 cut(s)	1254
Bpu14I	TTCGAA	1 cut(s)	1122
BpuEI	CTTGAG	4 cut(s)	212, 500, 896, 1589
BsaAI	YACGTR	1 cut(s)	181
BsaBI	GATNNNNATC	1 cut(s)	543
BsaJI	CCNNGG	3 cut(s)	102, 129, 792
BsaXI	ACNNNNNCTCC	2 cut(s)	197, 227
Bsc4I	CCNNNNNNNGG	2 cut(s)	73, 258
Bse1I	ACTGG	2 cut(s)	34, 855
Bse3DI	GCAATG	1 cut(s)	909
Bse8I	GATNNNNATC	1 cut(s)	543
BseBI	CCWGG	2 cut(s)	1110, 1516
BseDI	CCNNGG	3 cut(s)	102, 129, 792
BseGI	GGATG	3 cut(s)	421, 442, 1371
BseJI	GATNNNNATC	1 cut(s)	543
BseLI	CCNNNNNNNGG	2 cut(s)	73, 258
BseMI	GCAATG	1 cut(s)	909
BseMII	CTCAG	4 cut(s)	336, 1268, 1487, 1551
BseNI	ACTGG	2 cut(s)	34, 855
BseRI	GAGGAG	1 cut(s)	221
BseSI	GKGCMC	1 cut(s)	948
BseXI	GCAGC	6 cut(s)	94, 280, 315, 382, 484, 1270
BsgI	GTGCAG	2 cut(s)	570, 598
Bsh1285I	CGRYCG	1 cut(s)	1212
BshFI	GGCC	7 cut(s)	185, 306, 343, 888, 1094, 1113, 1370
BshNI	GGYRCC	1 cut(s)	510
BsiEI	CGRYCG	1 cut(s)	1212
BsiHKAI	GWGCWC	2 cut(s)	948, 1396
BsiHKCI	CYCGRG	1 cut(s)	68
BsiSI	CCGG	2 cut(s)	60, 1462
BslFI	GGGAC	1 cut(s)	1256
BslI	CCNNNNNNNGG	2 cut(s)	73, 258
BsmAI	GTCTC	1 cut(s)	161
BsmBI	CGTCTC	1 cut(s)	161
BsmFI	GGGAC	1 cut(s)	1256
BsmI	GAATGC	2 cut(s)	283, 1186
BsnI	GGCC	7 cut(s)	185, 306, 343, 888, 1094, 1113, 1370
BsoBI	CYCGRG	1 cut(s)	68
Bsp119I	TTCGAA	1 cut(s)	1122
Bsp1286I	GDGCHC	3 cut(s)	948, 1255, 1396
Bsp143I	GATC	8 cut(s)	56, 136, 255, 544, 646, 830, 1224, 1540
Bsp1720I	GCTNAGC	1 cut(s)	1254
Bsp19I	CCATGG	1 cut(s)	792
BspACI	CCGC	8 cut(s)	19, 48, 126, 186, 687, 854, 1208, 1314
BspANI	GGCC	7 cut(s)	185, 306, 343, 888, 1094, 1113, 1370
BspCNI	CTCAG	4 cut(s)	337, 1267, 1486, 1550
BspLI	GGNNCC	1 cut(s)	512
BspPI	GGATC	2 cut(s)	51, 539
BspT104I	TTCGAA	1 cut(s)	1122
BspT107I	GGYRCC	1 cut(s)	510
BsrDI	GCAATG	1 cut(s)	909
BsrI	ACTGG	2 cut(s)	34, 855
BssECI	CCNNGG	3 cut(s)	102, 129, 792
BssMI	GATC	8 cut(s)	56, 136, 255, 544, 646, 830, 1224, 1540
BssT1I	CCWWGG	2 cut(s)	102, 792
Bst2UI	CCWGG	2 cut(s)	1110, 1516
Bst4CI	ACNGT	3 cut(s)	922, 954, 1057
Bst6I	CTCTTC	2 cut(s)	976, 1199
BstAPI	GCANNNNNTGC	1 cut(s)	943
BstBAI	YACGTR	1 cut(s)	181
BstBI	TTCGAA	1 cut(s)	1122
BstC8I	GCNNGC	7 cut(s)	99, 113, 163, 266, 333, 1306, 1420
BstDEI	CTNAG	5 cut(s)	297, 345, 1254, 1473, 1537
BstDSI	CCRYGG	2 cut(s)	129, 792
BstF5I	GGATG	3 cut(s)	421, 442, 1371
BstH2I	RGCGCY	3 cut(s)	176, 329, 533
BstHHI	GCGC	3 cut(s)	175, 328, 532
BstKTI	GATC	8 cut(s)	59, 139, 258, 547, 649, 833, 1227, 1543
BstMAI	GTCTC	1 cut(s)	161
BstMBI	GATC	8 cut(s)	56, 136, 255, 544, 646, 830, 1224, 1540
BstMCI	CGRYCG	1 cut(s)	1212
BstMWI	GCNNNNNNNGC	6 cut(s)	332, 943, 1082, 1091, 1142, 1391
BstNI	CCWGG	2 cut(s)	1110, 1516
BstNSI	RCATGY	3 cut(s)	884, 1308, 1426
BstSCI	CCNGG	2 cut(s)	1108, 1514
BstSLI	GKGCMC	1 cut(s)	948
BstV1I	GCAGC	6 cut(s)	94, 280, 315, 382, 484, 1270
BstX2I	RGATCY	2 cut(s)	544, 1540
BstXI	CCANNNNNNTGG	1 cut(s)	799
BstYI	RGATCY	2 cut(s)	544, 1540
BsuI	GTATCC	1 cut(s)	745
BsuRI	GGCC	7 cut(s)	185, 306, 343, 888, 1094, 1113, 1370
BtgI	CCRYGG	2 cut(s)	129, 792
BtgZI	GCGATG	1 cut(s)	161
BtsCI	GGATG	3 cut(s)	421, 442, 1371
BtsIMutI	CAGTG	2 cut(s)	848, 1278
Cac8I	GCNNGC	7 cut(s)	99, 113, 163, 266, 333, 1306, 1420
CfoI	GCGC	3 cut(s)	175, 328, 532
Cfr13I	GGNCC	2 cut(s)	824, 1518
CseI	GACGC	2 cut(s)	88, 167
Csp6I	GTAC	2 cut(s)	178, 511
CviAII	CATG	7 cut(s)	287, 793, 881, 938, 1305, 1362, 1423
CviQI	GTAC	2 cut(s)	178, 511
DdeI	CTNAG	5 cut(s)	297, 345, 1254, 1473, 1537
DpnI	GATC	8 cut(s)	58, 138, 257, 546, 648, 832, 1226, 1542
DpnII	GATC	8 cut(s)	56, 136, 255, 544, 646, 830, 1224, 1540
DrdI	GACNNNNNNGTC	1 cut(s)	34
DriI	GACNNNNNGTC	2 cut(s)	10, 70
DseDI	GACNNNNNNGTC	1 cut(s)	34
EaeI	YGGCCR	5 cut(s)	183, 886, 1092, 1111, 1368
Eam1104I	CTCTTC	2 cut(s)	976, 1199
Eam1105I	GACNNNNNGTC	2 cut(s)	10, 70
EarI	CTCTTC	2 cut(s)	976, 1199
EciI	GGCGGA	3 cut(s)	37, 115, 869
Eco130I	CCWWGG	2 cut(s)	102, 792
Eco24I	GRGCYC	1 cut(s)	1255
Eco47I	GGWCC	2 cut(s)	824, 1518
Eco47III	AGCGCT	1 cut(s)	531
Eco88I	CYCGRG	1 cut(s)	68
EcoO109I	RGGNCCY	1 cut(s)	824
EcoRII	CCWGG	2 cut(s)	1108, 1514
EcoT14I	CCWWGG	2 cut(s)	102, 792
EcoT38I	GRGCYC	1 cut(s)	1255
ErhI	CCWWGG	2 cut(s)	102, 792
Esp3I	CGTCTC	1 cut(s)	161
FaeI	CATG	7 cut(s)	290, 796, 884, 941, 1308, 1365, 1426
FaqI	GGGAC	1 cut(s)	1256
FatI	CATG	7 cut(s)	286, 792, 880, 937, 1304, 1361, 1422
FauNDI	CATATG	2 cut(s)	594, 696
FbaI	TGATCA	1 cut(s)	646
Fnu4HI	GCNGC	7 cut(s)	83, 186, 294, 329, 396, 498, 1259
FokI	GGATG	3 cut(s)	428, 449, 1378
FriOI	GRGCYC	1 cut(s)	1255
Fsp4HI	GCNGC	7 cut(s)	83, 186, 294, 329, 396, 498, 1259
FspBI	CTAG	1 cut(s)	378
GlaI	GCGC	3 cut(s)	174, 327, 531
GluI	GCNGC	7 cut(s)	83, 186, 294, 329, 396, 498, 1259
GsuI	CTGGAG	1 cut(s)	224
HaeII	RGCGCY	3 cut(s)	176, 329, 533
HaeIII	GGCC	7 cut(s)	185, 306, 343, 888, 1094, 1113, 1370
HapII	CCGG	2 cut(s)	60, 1462
HgaI	GACGC	2 cut(s)	88, 167
HhaI	GCGC	3 cut(s)	175, 328, 532
Hin1II	CATG	7 cut(s)	290, 796, 884, 941, 1308, 1365, 1426
Hin6I	GCGC	3 cut(s)	173, 326, 530
HinP1I	GCGC	3 cut(s)	173, 326, 530
HincII	GTYRAC	2 cut(s)	424, 1279
HindII	GTYRAC	2 cut(s)	424, 1279
HindIII	AAGCTT	1 cut(s)	266
HinfI	GANTC	4 cut(s)	5, 71, 365, 1469
HpaII	CCGG	2 cut(s)	60, 1462
HphI	GGTGA	2 cut(s)	88, 620
Hpy166II	GTNNAC	4 cut(s)	424, 442, 946, 1279
Hpy188I	TCNGA	8 cut(s)	141, 835, 1224, 1442, 1476, 1487, 1540, 1564
Hpy8I	GTNNAC	4 cut(s)	424, 442, 946, 1279
Hpy99I	CGWCG	4 cut(s)	121, 124, 161, 1550
HpyAV	CCTTC	6 cut(s)	49, 316, 743, 1096, 1126, 1482
HpyCH4III	ACNGT	3 cut(s)	922, 954, 1057
HpyCH4IV	ACGT	2 cut(s)	180, 667
HpyF10VI	GCNNNNNNNGC	6 cut(s)	332, 943, 1082, 1091, 1142, 1391
HpyF3I	CTNAG	5 cut(s)	297, 345, 1254, 1473, 1537
HpySE526I	ACGT	2 cut(s)	180, 667
Hsp92II	CATG	7 cut(s)	290, 796, 884, 941, 1308, 1365, 1426
HspAI	GCGC	3 cut(s)	173, 326, 530
KpnI	GGTACC	1 cut(s)	514
Ksp22I	TGATCA	1 cut(s)	646
Kzo9I	GATC	8 cut(s)	56, 136, 255, 544, 646, 830, 1224, 1540
LmnI	GCTCC	4 cut(s)	261, 406, 1316, 1391
Lsp1109I	GCAGC	6 cut(s)	94, 280, 315, 382, 484, 1270
MaeI	CTAG	1 cut(s)	378
MaeII	ACGT	2 cut(s)	180, 667
MaeIII	GTNAC	7 cut(s)	76, 362, 608, 668, 906, 1372, 1466
MalI	GATC	8 cut(s)	58, 138, 257, 546, 648, 832, 1226, 1542
MboI	GATC	8 cut(s)	56, 136, 255, 544, 646, 830, 1224, 1540
MboII	GAAGA	4 cut(s)	34, 163, 993, 1186
MfeI	CAATTG	1 cut(s)	621
MflI	RGATCY	2 cut(s)	544, 1540
MhlI	GDGCHC	3 cut(s)	948, 1255, 1396
MlsI	TGGCCA	3 cut(s)	888, 1094, 1113
MluCI	AATT	3 cut(s)	621, 837, 1045
MluNI	TGGCCA	3 cut(s)	888, 1094, 1113
MlyI	GAGTC	3 cut(s)	80, 359, 1463
MmeI	TCCRAC	3 cut(s)	1327, 1465, 1587
Mox20I	TGGCCA	3 cut(s)	888, 1094, 1113
MroXI	GAANNNNTTC	1 cut(s)	985
MscI	TGGCCA	3 cut(s)	888, 1094, 1113
MseI	TTAA	3 cut(s)	660, 933, 1101
MslI	CAYNNNNRTG	2 cut(s)	414, 1232
Msp20I	TGGCCA	3 cut(s)	888, 1094, 1113
MspA1I	CMGCKG	4 cut(s)	85, 395, 497, 1385
MspI	CCGG	2 cut(s)	60, 1462
MspR9I	CCNGG	2 cut(s)	1110, 1516
MunI	CAATTG	1 cut(s)	621
Mva1269I	GAATGC	2 cut(s)	283, 1186
MvaI	CCWGG	2 cut(s)	1110, 1516
MwoI	GCNNNNNNNGC	6 cut(s)	332, 943, 1082, 1091, 1142, 1391
NcoI	CCATGG	1 cut(s)	792
NdeI	CATATG	2 cut(s)	594, 696
NdeII	GATC	8 cut(s)	56, 136, 255, 544, 646, 830, 1224, 1540
NlaIII	CATG	7 cut(s)	290, 796, 884, 941, 1308, 1365, 1426
NlaIV	GGNNCC	1 cut(s)	512
NmeAIII	GCCGAG	1 cut(s)	955
NmuCI	GTSAC	5 cut(s)	76, 362, 608, 668, 1466
NspI	RCATGY	3 cut(s)	884, 1308, 1426
NspV	TTCGAA	1 cut(s)	1122
OliI	CACNNNNGTG	1 cut(s)	1232
PaeI	GCATGC	1 cut(s)	1308
PaeR7I	CTCGAG	1 cut(s)	68
PciI	ACATGT	1 cut(s)	880
PcsI	WCGNNNNNNNCGW	1 cut(s)	162
PctI	GAATGC	2 cut(s)	283, 1186
PdmI	GAANNNNTTC	1 cut(s)	985
PkrI	GCNGC	7 cut(s)	84, 187, 295, 330, 397, 499, 1260
PleI	GAGTC	3 cut(s)	79, 359, 1463
PpsI	GAGTC	3 cut(s)	79, 359, 1463
Ppu21I	YACGTR	1 cut(s)	181
PpuMI	RGGWCCY	1 cut(s)	824
PscI	ACATGT	1 cut(s)	880
Psp5II	RGGWCCY	1 cut(s)	824
Psp6I	CCWGG	2 cut(s)	1108, 1514
PspGI	CCWGG	2 cut(s)	1108, 1514
PspN4I	GGNNCC	1 cut(s)	512
PspPI	GGNCC	2 cut(s)	824, 1518
PspPPI	RGGWCCY	1 cut(s)	824
PspXI	VCTCGAGB	1 cut(s)	68
PsuI	RGATCY	2 cut(s)	544, 1540
PvuII	CAGCTG	4 cut(s)	85, 395, 497, 1385
RsaI	GTAC	2 cut(s)	179, 512
RsaNI	GTAC	2 cut(s)	178, 511
RseI	CAYNNNNRTG	2 cut(s)	414, 1232
SaqAI	TTAA	3 cut(s)	660, 933, 1101
SatI	GCNGC	7 cut(s)	83, 186, 294, 329, 396, 498, 1259
Sau3AI	GATC	8 cut(s)	56, 136, 255, 544, 646, 830, 1224, 1540
Sau96I	GGNCC	2 cut(s)	824, 1518
SchI	GAGTC	3 cut(s)	80, 359, 1463
ScrFI	CCNGG	2 cut(s)	1110, 1516
SduI	GDGCHC	3 cut(s)	948, 1255, 1396
Sfr274I	CTCGAG	1 cut(s)	68
SfuI	TTCGAA	1 cut(s)	1122
SinI	GGWCC	2 cut(s)	824, 1518
SlaI	CTCGAG	1 cut(s)	68
SmiMI	CAYNNNNRTG	2 cut(s)	414, 1232
SmlI	CTYRAG	5 cut(s)	68, 227, 515, 911, 1568
SmoI	CTYRAG	5 cut(s)	68, 227, 515, 911, 1568
SphI	GCATGC	1 cut(s)	1308
Sse9I	AATT	3 cut(s)	621, 837, 1045
SsiI	CCGC	8 cut(s)	19, 48, 126, 186, 687, 854, 1208, 1314
SspI	AATATT	1 cut(s)	1118
SspMI	CTAG	1 cut(s)	378
StyD4I	CCNGG	2 cut(s)	1108, 1514
StyI	CCWWGG	2 cut(s)	102, 792
TaaI	ACNGT	3 cut(s)	922, 954, 1057
TaiI	ACGT	2 cut(s)	183, 670
TaqI	TCGA	7 cut(s)	55, 69, 829, 1079, 1122, 1328, 1545
TasI	AATT	3 cut(s)	621, 837, 1045
TauI	GCSGC	1 cut(s)	188
Tru1I	TTAA	3 cut(s)	660, 933, 1101
Tru9I	TTAA	3 cut(s)	660, 933, 1101
TscAI	CASTG	2 cut(s)	855, 1278
TseFI	GTSAC	5 cut(s)	76, 362, 608, 668, 1466
TseI	GCWGC	6 cut(s)	82, 293, 328, 395, 497, 1258
Tsp45I	GTSAC	5 cut(s)	76, 362, 608, 668, 1466
TspRI	CASTG	2 cut(s)	855, 1278
VneI	GTGCAC	1 cut(s)	944
VpaK11BI	GGWCC	2 cut(s)	824, 1518
XceI	RCATGY	3 cut(s)	884, 1308, 1426
XcmI	CCANNNNNNNNNTGG	1 cut(s)	436
XhoI	CTCGAG	1 cut(s)	68
XmnI	GAANNNNTTC	1 cut(s)	985
XspI	CTAG	1 cut(s)	378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.