pycom15g28500

Calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0001949
Physical Location & Seq
Reverse (-)
24537794 .. 24548547
10754 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3327 bp
ATGGCAGAGACGAAGCGTTACGGTCTTGGTAATCAATTGGATATTGCGCAGATACTCTTAGAAGCTAAACATCGTTGGCTACGCCCGGCTGAAATATGTGAAATTCTTCAAAATTATCAAAAATTTCAGATTGCTTCAGTGCCTGCAAATAAGCCACCGGGTGGATCCCTTTTCCTATTTGATCGGAAGGTGCTTAGATATTTCAGGAAAGATGGCCATAACTGGAGGAAGAAAAAAGATGGAAAGACAGTGAAGGAAGCCCATGAGAGACTTAAGGCTGGAAGCGTTGATGTGCTGCACTGCTATTATGCACATGGAGAAGAAAATGAAAATTTCCAAAGGCGCAGTTATTGGATGCTTGAAGAGGCTCTGCAACACATAGTTCTCGTCCACTACCGGGAAGTTAAGGGAAATAGGACCAACTATAACCATATTAAAGGCACTGAAGAAGGTGTTCCTTATTCCCATGAAACTGAAGAAGTTGCACTCAATTCTGAAATGGACAATTCTGTTTCTTCTAGTTTCAATCCAAGTAGTTTCCAAATGCGTTCCCAAGCTACTGACGCAACAAGCTTAAGTAGCGCTCAAGCATCAGAATTTGAAGATGCTGAATCAGTATATAATCACCAAGCAAGTTCCCAGTTACAACCTTTTCTCGAATTACTACAGCCTAAGGCTGAGAAGACCAATGCTGGAGTATCTACTGCATTCTATCCGATGTCATTTTCAGATGAATATCAAGAAAAATTGTCAGCCATTCCTGGGGTGAATTTTAGCTCACACACTCAAGCATATAGGAAGGAAGATGTTAAAGATGCTGGCGTTACCTATGATCCCAGGAGAAATCTTAACTCAACATTATGCGATGGTGCCTTGGGGAATATTACTACTGGCTTTCAATCTTTGCCTTTTCAGCCATCAATTTCAGCAACACATTCTGATTCAACGGGAATTATCTCTAAGCAAGAGAATGAGACGTTTGGGCACCTTTTCACAAACAATTTTGGTAAAAAGCAGATGTATGAGGATAGACCAAGGGTCCAACAAAGCTGGCAGACTTTAGAAGCCAACTCTTCTGGTTCATCCAGTGGGCCTGTGGATCAAAACTTGCATTCAAATACAGCATATGATGTCAGCACAAGGTTCCATGAAGGAGTCGATGCTTCCAATTTACTCAATTCTCTGGTGTGCCATGTGGATTCTGATAAGACAAATGATTATTCTATGCCAAATGACCTTCAAATACAGCCTTCAAACCCTGAGCAAGAATATCATCTGAAGTCTATTTCGAAGAGAGATGAAACCATAGAAGGAAGCTACAATCATGCTTTTGCTACAAGGCCTTTGTTAGATGAAGGCTTGAAGAAGCTTGACAGTTTCAACCGATGGATGAGTAAAGAACTAGGAGATGTGGATGAGACACAAACACAGTCCAATTCAGAGACCTACTGGGATACTGTAGAAAGTGAGAATGGGGTCGATGAATCCAGTGTTCCTCTTCACGTACGCTTGGATAGCTATATGCTGGGGCCTTCTCTTTCCCAGGACCAGCTCTTTAGCATTATTGATTTCTCGCCAAACTGGGCATATGAAAACTCTGAAATTAAGGTTCTGATCACAGGAAGATTCTTGAAGAGTCAAGAAGCAGAAAGTTGTAAGTGGTCATGCATGTTTGGGGAAGTTGAAGTTCCTGCTGAGGTTATAGCAGATGGTGTTCTTCGTTGTTATACTCCCATCCATAAGGCTGGGAGGATTCCTTTCTATGTGACATGTTCCAATAGGCTGGCGTGTAGTGAAATCAGGGAATTTGAATACCGAGTCGGCCAAATACCAGATTATGATGCGAAAGATGATTACAGTGGCTGCATGAATGAAATATTAAATATGCGCTTTGGAAAATTACTGTCCTTAAGCTCTAGCTCTCCAACTTTTGATCCCACCAGCATAGCAGAGAATTCTGAGTTGATCAGTAAAATTGATTTATTGTTGAAAAATGACAATGGTGAGTGGGACAGGATGCTACAACTTACGTCAGATGAGGACTTTTCCTTAGAGAGAGTAGAGGACCAGTTGCTTCAACAGTTACTTAAAGAGAAGTTGCATGCATGGCTCTTGCAAAAGTTGGCTGCTGGTGGAAAAGGCCCTAGTGTACTAGACGAGGGTGGCCAAGGTGTATTACATTTTGGAGCTGCTCTTGGCTATGATTGGGTCTTACTGCCCACAATAACTGCCGGAGTCAGTGTCAATTTTCGTGATGTGAATGGATGGACAGCTCTTCACTGGGCAGCTTTTCATGGCAGAGAGCGCACGGTTGCTTCCCTCATCTCTCTTGGTGCGGCTCCTGGATTATTAACAGATCCAAGAACCAAATATCCTGCTGGAAGAACACCTGCAGACCTAGCTTCTGCACAGGGCCACAAAGGAATTGCTGGTTATCTTGCTGAATCTGCTTTGAGTGACCACCTTTCATTTCTTAATTTGGATGTCAAGGAAGGCAATAATGCTGAGATTTCAGGAGCAAAAGCAGTAGAAACAGCTTCAGAACGAATTGCAACTCCTATCAGGAATGGGGATTTAATGGGTGGGCTTTCCCTGAGGGATTCTTTAACCGCTGTCTGTAATGCTACCCAAGCTGCTGCTCGTATTCATCAAGTGCTCAGGGTAAAATCTTTCCAGCGGAAGCAGTTGAAAGAATATGGCAGTGATAATTTTGGAATTTCAGATGAAGATGCTCTATCACTCATTGCAGTTAAGTCGCATAAGGCAGGGAAACGTGATGAGCATGTGGATGCTGCTGCAATTCGAATACAAAATAAGTTCCGTAGTTGGAAGGGTAGAAAAGATTATTTGATAATCCGACAACGTATTGTCAAAATTCAGGCTCATGTAAGAGGCCACCAGGTGAGAAAAAACTACAGAAAGATAGTCTGGTCCGTAGGAATTGTGGAGAAGATAATTTTGCGTTGGAGACGAAAAGGAAGTGGATTGCGTGGGTTCAAGCCAGAAGCACTTGCTGAGCCCCCCAGCATGCAAGCTTCATCCTCGAAGGATGATGATTACGATGTACTGAAAGAAGGAAGGAAGCAAACAGAGCAAAGGTTGCAAAAGGCGCTTGCTAGGGTGAAGTCCATGGTTCGATATCCCGAGGCAAGAGATCAATACAGTCGGCTGCTTAATGTTGTCACTGAGATACAGGAAACCAAGGTGGTATACGACAGTATTATGAATAGTTCAGATGGGAGAGCTGATATGGATGACGACCTCGTAGATATTGCAGCATTGTTGGATGAAGACGATGTTTGCATGCCTACAGCAGCTCCAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 CG-1 IQ TIG

Protein Analysis

1109

Amino Acids

124.22

Weight (kDa)

5.71

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CG-1 PF03859 21 - 134 4.2e-50 CG-1 domain
Ank_2 PF12796 728 - 816 1e-06 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2398
Acc16I TGCGCA 1 cut(s) 48
Acc36I ACCTGC 1 cut(s) 2398
AccB1I GGYRCC 2 cut(s) 869, 984
AccB7I CCANNNNNTGG 1 cut(s) 161
AccI GTMKAC 1 cut(s) 3210
AciI CCGC 3 cut(s) 2336, 2610, 2677
AclWI GGATC 6 cut(s) 159, 172, 827, 1107, 1928, 2351
AcoI YGGCCR 3 cut(s) 214, 1822, 2164
AcsI RAATTY 9 cut(s) 102, 122, 331, 596, 769, 1805, 1954, 2715, 2874
AcuI CTGAAG 5 cut(s) 120, 465, 495, 1298, 2523
AdeI CACNNNGTG 2 cut(s) 161, 2902
AfaI GTAC 3 cut(s) 1506, 2151, 3066
AfeI AGCGCT 1 cut(s) 583
AfiI CCNNNNNNNGG 3 cut(s) 161, 397, 762
AflII CTTAAG 3 cut(s) 272, 574, 1909
AflIII ACRYGT 1 cut(s) 1769
AhdI GACNNNNNGTC 1 cut(s) 1037
AjnI CCWGG 5 cut(s) 760, 836, 1542, 2341, 2898
AloI GAACNNNNNNTCC 2 cut(s) 2356, 2388
Alw21I GWGCWC 1 cut(s) 2658
Alw26I GTCTC 6 cut(s) 2, 262, 968, 1412, 1436, 2962
AlwI GGATC 6 cut(s) 159, 172, 827, 1107, 1928, 2351
AlwNI CAGNNNCTG 2 cut(s) 143, 1863
Ama87I CYCGRG 1 cut(s) 3143
Aor51HI AGCGCT 1 cut(s) 583
AoxI GGCC 9 cut(s) 214, 1091, 1340, 1529, 1822, 2140, 2164, 2413, 2893
ApoI RAATTY 9 cut(s) 102, 122, 331, 596, 769, 1805, 1954, 2715, 2874
Asp700I GAANNNNTTC 2 cut(s) 105, 453
AspLEI GCGC 6 cut(s) 49, 345, 584, 1890, 2307, 3112
AspS9I GGNCC 9 cut(s) 417, 1039, 1091, 1529, 1546, 2065, 2141, 2413, 2931
AsuC2I CCSGG 3 cut(s) 86, 159, 398
AsuHPI GGTGA 5 cut(s) 617, 778, 2015, 2914, 3133
AsuII TTCGAA 2 cut(s) 1289, 2803
AvaI CYCGRG 1 cut(s) 3143
AvaII GGWCC 5 cut(s) 417, 1039, 1546, 2065, 2931
AxyI CCTNAGG 2 cut(s) 672, 2594
BaeGI GKGCMC 1 cut(s) 987
BalI TGGCCA 2 cut(s) 216, 2166
BamHI GGATCC 1 cut(s) 164
BanI GGYRCC 2 cut(s) 869, 984
BanII GRGCYC 1 cut(s) 3021
BbsI GAAGAC 2 cut(s) 689, 3297
Bbv12I GWGCWC 1 cut(s) 2658
BbvCI CCTCAGC 1 cut(s) 1695
BccI CCATC 9 cut(s) 206, 233, 860, 925, 1380, 1703, 1742, 2259, 3230
BcgI CGANNNNNNTGC 2 cut(s) 2736, 2770
BciT130I CCWGG 5 cut(s) 762, 838, 1544, 2343, 2900
BciVI GTATCC 1 cut(s) 1447
BclI TGATCA 2 cut(s) 1614, 1965
BcnI CCSGG 3 cut(s) 86, 159, 398
BcoDI GTCTC 6 cut(s) 2, 262, 968, 1412, 1436, 2962
BfaI CTAG 7 cut(s) 519, 1403, 1917, 2145, 2153, 2399, 3117
BfmI CTRYAG 5 cut(s) 665, 1458, 2391, 2914, 3309
BfoI RGCGCY 2 cut(s) 585, 3113
BfrI CTTAAG 3 cut(s) 272, 574, 1909
BfuAI ACCTGC 1 cut(s) 2398
BfuI GTATCC 1 cut(s) 1447
BlpI GCTNAGC 1 cut(s) 3015
Bme1390I CCNGG 8 cut(s) 86, 159, 398, 762, 838, 1544, 2343, 2900
Bme18I GGWCC 5 cut(s) 417, 1039, 1546, 2065, 2931
BmeRI GACNNNNNGTC 1 cut(s) 1037
BmeT110I CYCGRG 1 cut(s) 3143
BmgT120I GGNCC 9 cut(s) 417, 1039, 1091, 1529, 1546, 2065, 2141, 2413, 2931
BmiI GGNNCC 7 cut(s) 166, 871, 986, 1040, 1145, 1530, 2340
BmrFI CCNGG 8 cut(s) 86, 159, 398, 762, 838, 1544, 2343, 2900
BmrI ACTGGG 4 cut(s) 634, 1459, 1591, 2290
BmsI GCATC 9 cut(s) 345, 595, 599, 805, 1150, 1831, 2007, 2719, 2779
BmuI ACTGGG 4 cut(s) 634, 1459, 1591, 2290
BpiI GAAGAC 2 cut(s) 689, 3297
BpmI CTGGAG 3 cut(s) 244, 714, 3303
Bpu10I CCTNAGC 3 cut(s) 1260, 1695, 2657
Bpu1102I GCTNAGC 1 cut(s) 3015
Bpu14I TTCGAA 2 cut(s) 1289, 2803
BpuEI CTTGAG 2 cut(s) 570, 771
BpuMI CCSGG 3 cut(s) 86, 159, 398
BsaAI YACGTR 1 cut(s) 1504
BsaBI GATNNNNATC 1 cut(s) 735
BsaI GGTCTC 1 cut(s) 1436
BsaJI CCNNGG 9 cut(s) 761, 836, 873, 1034, 1542, 2167, 3129, 3144, 3201
BsaXI ACNNNNNCTCC 3 cut(s) 2226, 2256, 3301
Bsc4I CCNNNNNNNGG 3 cut(s) 161, 397, 762
Bse1I ACTGG 9 cut(s) 227, 640, 895, 1086, 1454, 1488, 1586, 2068, 2285
Bse21I CCTNAGG 2 cut(s) 672, 2594
Bse3DI GCAATG 1 cut(s) 2742
Bse8I GATNNNNATC 1 cut(s) 735
BseBI CCWGG 5 cut(s) 762, 838, 1544, 2343, 2900
BseDI CCNNGG 9 cut(s) 761, 836, 873, 1034, 1542, 2167, 3129, 3144, 3201
BseJI GATNNNNATC 1 cut(s) 735
BseLI CCNNNNNNNGG 3 cut(s) 161, 397, 762
BseMI GCAATG 1 cut(s) 2742
BseMII CTCAG 9 cut(s) 669, 1251, 1686, 1950, 2496, 2585, 2671, 3006, 3177
BseNI ACTGG 9 cut(s) 227, 640, 895, 1086, 1454, 1488, 1586, 2068, 2285
BseSI GKGCMC 1 cut(s) 987
BseYI CCCAGC 3 cut(s) 1525, 1745, 3023
BsgI GTGCAG 2 cut(s) 281, 2391
BshFI GGCC 9 cut(s) 216, 1093, 1342, 1531, 1824, 2142, 2166, 2415, 2895
BshNI GGYRCC 2 cut(s) 869, 984
BsiHKAI GWGCWC 1 cut(s) 2658
BsiHKCI CYCGRG 1 cut(s) 3143
BsiSI CCGG 4 cut(s) 86, 158, 397, 2232
BsiWI CGTACG 1 cut(s) 1504
BslFI GGGAC 1 cut(s) 2024
BslI CCNNNNNNNGG 3 cut(s) 161, 397, 762
BsmAI GTCTC 6 cut(s) 2, 262, 968, 1412, 1436, 2962
BsmBI CGTCTC 3 cut(s) 2, 968, 2962
BsmFI GGGAC 1 cut(s) 2024
BsmI GAATGC 2 cut(s) 707, 1111
BsnI GGCC 9 cut(s) 216, 1093, 1342, 1531, 1824, 2142, 2166, 2415, 2895
Bso31I GGTCTC 1 cut(s) 1436
BsoBI CYCGRG 1 cut(s) 3143
Bsp119I TTCGAA 2 cut(s) 1289, 2803
Bsp1286I GDGCHC 3 cut(s) 987, 2658, 3021
Bsp143I GATC 9 cut(s) 164, 181, 832, 1099, 1614, 1933, 1965, 2356, 3154
Bsp1720I GCTNAGC 1 cut(s) 3015
Bsp19I CCATGG 1 cut(s) 3129
BspACI CCGC 3 cut(s) 2336, 2610, 2677
BspANI GGCC 9 cut(s) 216, 1093, 1342, 1531, 1824, 2142, 2166, 2415, 2895
BspCNI CTCAG 9 cut(s) 670, 1252, 1687, 1951, 2497, 2586, 2670, 3007, 3178
BspLI GGNNCC 7 cut(s) 166, 871, 986, 1040, 1145, 1530, 2340
BspMAI CTGCAG 1 cut(s) 2395
BspMI ACCTGC 1 cut(s) 2398
BspPI GGATC 6 cut(s) 159, 172, 827, 1107, 1928, 2351
BspQI GCTCTTC 1 cut(s) 2280
BspT104I TTCGAA 2 cut(s) 1289, 2803
BspT107I GGYRCC 2 cut(s) 869, 984
BspTI CTTAAG 3 cut(s) 272, 574, 1909
BspTNI GGTCTC 1 cut(s) 1436
BsrDI GCAATG 1 cut(s) 2742
BsrI ACTGG 9 cut(s) 227, 640, 895, 1086, 1454, 1488, 1586, 2068, 2285
BssECI CCNNGG 9 cut(s) 761, 836, 873, 1034, 1542, 2167, 3129, 3144, 3201
BssMI GATC 9 cut(s) 164, 181, 832, 1099, 1614, 1933, 1965, 2356, 3154
BssNAI GTATAC 1 cut(s) 3211
BssT1I CCWWGG 5 cut(s) 873, 1034, 2167, 3129, 3201
Bst1107I GTATAC 1 cut(s) 3211
Bst2UI CCWGG 5 cut(s) 762, 838, 1544, 2343, 2900
Bst6I CTCTTC 6 cut(s) 357, 1078, 1286, 1503, 1628, 2280
BstAFI CTTAAG 3 cut(s) 272, 574, 1909
BstAPI GCANNNNNTGC 1 cut(s) 3100
BstBAI YACGTR 1 cut(s) 1504
BstBI TTCGAA 2 cut(s) 1289, 2803
BstC8I GCNNGC 9 cut(s) 144, 820, 1052, 1785, 2103, 3029, 3033, 3114, 3305
BstDSI CCRYGG 1 cut(s) 3129
BstH2I RGCGCY 2 cut(s) 585, 3113
BstHHI GCGC 6 cut(s) 49, 345, 584, 1890, 2307, 3112
BstKTI GATC 9 cut(s) 167, 184, 835, 1102, 1617, 1936, 1968, 2359, 3157
BstMAI GTCTC 6 cut(s) 2, 262, 968, 1412, 1436, 2962
BstMBI GATC 9 cut(s) 164, 181, 832, 1099, 1614, 1933, 1965, 2356, 3154
BstNI CCWGG 5 cut(s) 762, 838, 1544, 2343, 2900
BstNSI RCATGY 6 cut(s) 1672, 1773, 2105, 2786, 3031, 3307
BstSCI CCNGG 8 cut(s) 84, 157, 396, 760, 836, 1542, 2341, 2898
BstSFI CTRYAG 5 cut(s) 665, 1458, 2391, 2914, 3309
BstSLI GKGCMC 1 cut(s) 987
BstV2I GAAGAC 2 cut(s) 689, 3297
BstX2I RGATCY 2 cut(s) 164, 2356
BstXI CCANNNNNNTGG 2 cut(s) 1745, 1783
BstYI RGATCY 2 cut(s) 164, 2356
BstZ17I GTATAC 1 cut(s) 3211
Bsu36I CCTNAGG 2 cut(s) 672, 2594
BsuI GTATCC 1 cut(s) 1447
BsuRI GGCC 9 cut(s) 216, 1093, 1342, 1531, 1824, 2142, 2166, 2415, 2895
BtgI CCRYGG 1 cut(s) 3129
BtgZI GCGATG 1 cut(s) 879
BtsI GCAGTG 2 cut(s) 298, 2707
BveI ACCTGC 1 cut(s) 2398
Cac8I GCNNGC 9 cut(s) 144, 820, 1052, 1785, 2103, 3029, 3033, 3114, 3305
CaiI CAGNNNCTG 2 cut(s) 143, 1863
CfoI GCGC 6 cut(s) 49, 345, 584, 1890, 2307, 3112
Cfr13I GGNCC 9 cut(s) 417, 1039, 1091, 1529, 1546, 2065, 2141, 2413, 2931
CseI GACGC 1 cut(s) 572
CsiI ACCWGGT 1 cut(s) 2898
Csp6I GTAC 3 cut(s) 1505, 2150, 3065
CviQI GTAC 3 cut(s) 1505, 2150, 3065
DpnI GATC 9 cut(s) 166, 183, 834, 1101, 1616, 1935, 1967, 2358, 3156
DpnII GATC 9 cut(s) 164, 181, 832, 1099, 1614, 1933, 1965, 2356, 3154
DraIII CACNNNGTG 2 cut(s) 161, 2902
DriI GACNNNNNGTC 1 cut(s) 1037
EaeI YGGCCR 3 cut(s) 214, 1822, 2164
Eam1104I CTCTTC 6 cut(s) 357, 1078, 1286, 1503, 1628, 2280
Eam1105I GACNNNNNGTC 1 cut(s) 1037
EarI CTCTTC 6 cut(s) 357, 1078, 1286, 1503, 1628, 2280
Eco130I CCWWGG 5 cut(s) 873, 1034, 2167, 3129, 3201
Eco147I AGGCCT 1 cut(s) 1342
Eco24I GRGCYC 1 cut(s) 3021
Eco31I GGTCTC 1 cut(s) 1436
Eco32I GATATC 1 cut(s) 3140
Eco47I GGWCC 5 cut(s) 417, 1039, 1546, 2065, 2931
Eco47III AGCGCT 1 cut(s) 583
Eco57I CTGAAG 5 cut(s) 120, 465, 495, 1298, 2523
Eco81I CCTNAGG 2 cut(s) 672, 2594
Eco88I CYCGRG 1 cut(s) 3143
EcoO109I RGGNCCY 2 cut(s) 1529, 2141
EcoRI GAATTC 1 cut(s) 1954
EcoRII CCWGG 5 cut(s) 760, 836, 1542, 2341, 2898
EcoRV GATATC 1 cut(s) 3140
EcoT14I CCWWGG 5 cut(s) 873, 1034, 2167, 3129, 3201
EcoT22I ATGCAT 2 cut(s) 1670, 2107
EcoT38I GRGCYC 1 cut(s) 3021
ErhI CCWWGG 5 cut(s) 873, 1034, 2167, 3129, 3201
Esp3I CGTCTC 3 cut(s) 2, 968, 2962
FaqI GGGAC 1 cut(s) 2024
FauNDI CATATG 2 cut(s) 1126, 1588
FbaI TGATCA 2 cut(s) 1614, 1965
FblI GTMKAC 1 cut(s) 3210
FriOI GRGCYC 1 cut(s) 3021
FspBI CTAG 7 cut(s) 519, 1403, 1917, 2145, 2153, 2399, 3117
FspI TGCGCA 1 cut(s) 48
GlaI GCGC 6 cut(s) 48, 344, 583, 1889, 2306, 3111
GsaI CCCAGC 3 cut(s) 1529, 1749, 3027
GsuI CTGGAG 3 cut(s) 244, 714, 3303
HaeII RGCGCY 2 cut(s) 585, 3113
HaeIII GGCC 9 cut(s) 216, 1093, 1342, 1531, 1824, 2142, 2166, 2415, 2895
HapII CCGG 4 cut(s) 86, 158, 397, 2232
HgaI GACGC 1 cut(s) 572
HhaI GCGC 6 cut(s) 49, 345, 584, 1890, 2307, 3112
Hin6I GCGC 6 cut(s) 47, 343, 582, 1888, 2305, 3110
HinP1I GCGC 6 cut(s) 47, 343, 582, 1888, 2305, 3110
HindIII AAGCTT 3 cut(s) 571, 1367, 3033
HpaII CCGG 4 cut(s) 86, 158, 397, 2232
HphI GGTGA 5 cut(s) 617, 778, 2015, 2914, 3133
Hpy166II GTNNAC 3 cut(s) 391, 2150, 3211
Hpy8I GTNNAC 3 cut(s) 391, 2150, 3211
HpyCH4IV ACGT 5 cut(s) 977, 1503, 2030, 2773, 2863
HpySE526I ACGT 5 cut(s) 977, 1503, 2030, 2773, 2863
HspAI GCGC 6 cut(s) 47, 343, 582, 1888, 2305, 3110
Ksp22I TGATCA 2 cut(s) 1614, 1965
Kzo9I GATC 9 cut(s) 164, 181, 832, 1099, 1614, 1933, 1965, 2356, 3154
LguI GCTCTTC 1 cut(s) 2280
LmnI GCTCC 4 cut(s) 2186, 2344, 2516, 3322
LweI GCATC 9 cut(s) 345, 595, 599, 805, 1150, 1831, 2007, 2719, 2779
MabI ACCWGGT 1 cut(s) 2898
MaeI CTAG 7 cut(s) 519, 1403, 1917, 2145, 2153, 2399, 3117
MaeII ACGT 5 cut(s) 977, 1503, 2030, 2773, 2863
MaeIII GTNAC 7 cut(s) 17, 642, 823, 1765, 2082, 2456, 3181
MalI GATC 9 cut(s) 166, 183, 834, 1101, 1616, 1935, 1967, 2358, 3156
MboI GATC 9 cut(s) 164, 181, 832, 1099, 1614, 1933, 1965, 2356, 3154
MfeI CAATTG 1 cut(s) 35
MflI RGATCY 2 cut(s) 164, 2356
MhlI GDGCHC 3 cut(s) 987, 2658, 3021
MlsI TGGCCA 2 cut(s) 216, 2166
MluNI TGGCCA 2 cut(s) 216, 2166
MlyI GAGTC 4 cut(s) 1164, 1645, 1827, 2244
MmeI TCCRAC 6 cut(s) 1066, 1949, 2807, 2881, 2945, 3264
Mox20I TGGCCA 2 cut(s) 216, 2166
Mph1103I ATGCAT 2 cut(s) 1670, 2107
MroXI GAANNNNTTC 2 cut(s) 105, 453
MscI TGGCCA 2 cut(s) 216, 2166
MslI CAYNNNNRTG 1 cut(s) 2787
Msp20I TGGCCA 2 cut(s) 216, 2166
MspA1I CMGCKG 2 cut(s) 2612, 2677
MspCI CTTAAG 3 cut(s) 272, 574, 1909
MspI CCGG 4 cut(s) 86, 158, 397, 2232
MspR9I CCNGG 8 cut(s) 86, 159, 398, 762, 838, 1544, 2343, 2900
MunI CAATTG 1 cut(s) 35
Mva1269I GAATGC 2 cut(s) 707, 1111
MvaI CCWGG 5 cut(s) 762, 838, 1544, 2343, 2900
NciI CCSGG 3 cut(s) 86, 159, 398
NcoI CCATGG 1 cut(s) 3129
NdeI CATATG 2 cut(s) 1126, 1588
NdeII GATC 9 cut(s) 164, 181, 832, 1099, 1614, 1933, 1965, 2356, 3154
NlaIV GGNNCC 7 cut(s) 166, 871, 986, 1040, 1145, 1530, 2340
NmuCI GTSAC 3 cut(s) 1765, 2456, 3181
NsbI TGCGCA 1 cut(s) 48
NsiI ATGCAT 2 cut(s) 1670, 2107
NspI RCATGY 6 cut(s) 1672, 1773, 2105, 2786, 3031, 3307
NspV TTCGAA 2 cut(s) 1289, 2803
PaeI GCATGC 3 cut(s) 2105, 3031, 3307
PaqCI CACCTGC 1 cut(s) 2398
PceI AGGCCT 1 cut(s) 1342
PciI ACATGT 1 cut(s) 1769
PciSI GCTCTTC 1 cut(s) 2280
PctI GAATGC 2 cut(s) 707, 1111
PdmI GAANNNNTTC 2 cut(s) 105, 453
PfeI GAWTC 8 cut(s) 611, 941, 1199, 1484, 1626, 1753, 2444, 2600
Pfl23II CGTACG 1 cut(s) 1504
PflMI CCANNNNNTGG 1 cut(s) 161
PfoI TCCNGGA 1 cut(s) 2341
PleI GAGTC 4 cut(s) 1163, 1644, 1826, 2243
PpsI GAGTC 4 cut(s) 1163, 1644, 1826, 2243
Ppu21I YACGTR 1 cut(s) 1504
PscI ACATGT 1 cut(s) 1769
Psp6I CCWGG 5 cut(s) 760, 836, 1542, 2341, 2898
PspFI CCCAGC 3 cut(s) 1525, 1745, 3023
PspGI CCWGG 5 cut(s) 760, 836, 1542, 2341, 2898
PspLI CGTACG 1 cut(s) 1504
PspN4I GGNNCC 7 cut(s) 166, 871, 986, 1040, 1145, 1530, 2340
PspPI GGNCC 9 cut(s) 417, 1039, 1091, 1529, 1546, 2065, 2141, 2413, 2931
PstI CTGCAG 1 cut(s) 2395
PstNI CAGNNNCTG 2 cut(s) 143, 1863
PsuI RGATCY 2 cut(s) 164, 2356
RsaI GTAC 3 cut(s) 1506, 2151, 3066
RsaNI GTAC 3 cut(s) 1505, 2150, 3065
RseI CAYNNNNRTG 1 cut(s) 2787
SapI GCTCTTC 1 cut(s) 2280
Sau3AI GATC 9 cut(s) 164, 181, 832, 1099, 1614, 1933, 1965, 2356, 3154
Sau96I GGNCC 9 cut(s) 417, 1039, 1091, 1529, 1546, 2065, 2141, 2413, 2931
SchI GAGTC 4 cut(s) 1164, 1645, 1827, 2244
ScrFI CCNGG 8 cut(s) 86, 159, 398, 762, 838, 1544, 2343, 2900
SduI GDGCHC 3 cut(s) 987, 2658, 3021
SexAI ACCWGGT 1 cut(s) 2898
SfaNI GCATC 9 cut(s) 345, 595, 599, 805, 1150, 1831, 2007, 2719, 2779
SfcI CTRYAG 5 cut(s) 665, 1458, 2391, 2914, 3309
SfuI TTCGAA 2 cut(s) 1289, 2803
SinI GGWCC 5 cut(s) 417, 1039, 1546, 2065, 2931
SmiMI CAYNNNNRTG 1 cut(s) 2787
SmlI CTYRAG 5 cut(s) 272, 574, 585, 786, 1909
SmoI CTYRAG 5 cut(s) 272, 574, 585, 786, 1909
SphI GCATGC 3 cut(s) 2105, 3031, 3307
SseBI AGGCCT 1 cut(s) 1342
SsiI CCGC 3 cut(s) 2336, 2610, 2677
SspI AATATT 2 cut(s) 883, 1878
SspMI CTAG 7 cut(s) 519, 1403, 1917, 2145, 2153, 2399, 3117
StuI AGGCCT 1 cut(s) 1342
StyD4I CCNGG 8 cut(s) 84, 157, 396, 760, 836, 1542, 2341, 2898
StyI CCWWGG 5 cut(s) 873, 1034, 2167, 3129, 3201
TaiI ACGT 5 cut(s) 980, 1506, 2033, 2776, 2866
TaqI TCGA 7 cut(s) 657, 1158, 1289, 1479, 2803, 3044, 3136
TatI WGTACW 2 cut(s) 2149, 3064
TauI GCSGC 1 cut(s) 2339
TfiI GAWTC 8 cut(s) 611, 941, 1199, 1484, 1626, 1753, 2444, 2600
TseFI GTSAC 3 cut(s) 1765, 2456, 3181
Tsp45I GTSAC 3 cut(s) 1765, 2456, 3181
TspGWI ACGGA 2 cut(s) 2810, 2923
Van91I CCANNNNNTGG 1 cut(s) 161
Vha464I CTTAAG 3 cut(s) 272, 574, 1909
VpaK11BI GGWCC 5 cut(s) 417, 1039, 1546, 2065, 2931
XapI RAATTY 9 cut(s) 102, 122, 331, 596, 769, 1805, 1954, 2715, 2874
XceI RCATGY 6 cut(s) 1672, 1773, 2105, 2786, 3031, 3307
XcmI CCANNNNNNNNNTGG 1 cut(s) 1093
XmiI GTMKAC 1 cut(s) 3210
XmnI GAANNNNTTC 2 cut(s) 105, 453
XspI CTAG 7 cut(s) 519, 1403, 1917, 2145, 2153, 2399, 3117
Zsp2I ATGCAT 2 cut(s) 1670, 2107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.