Rmu_sc0008490.1_g000016

Calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008490.1
OG0001949
Physical Location & Seq
Reverse (-)
56307 .. 64136
7830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008490.1_g000016.1.cds

Sequence Viewer

Length: 3072 bp
atggcggctaggaagcgacagcgtcttgatgatcaattagaacttccgcaaatacttttacaagcaaagcatcgatggctacgtcctgctgaaattttcgaagttcttcaaaatcattcaagattttgtctttcggagcctgcagatgagccatcgagtggatcattgtttctttatgatcggaacgtgctcaggtctttcagaaaagatggctatagatggaaaaagactaaagatggaaaggcagtgaaggaagcccatgagaggctcaaggctggaggagttgaggcattacattgctactatgcccatggagaagaaaatgagaatttccaaagacgctgttattggatgattgaagagcctctctcgcacatagttctggtccactaccgagaagtaaagacttctgaaggtaacttgtcatgttcatccaagttgcctatcaatcggaatatgcattcagatactgcatatcatgccagtacttcattccctggaggagtcaatgcagacgagttactcaattccctggggcccccttgccatatgaatttggataaacaaaatgattcttctgtgcataggcactctgataagcaaaatgaccctcgaatattgaagaatcttgacagttctgatcaatgtatgaatacagaactaggagacctgactgagctacagatgtccagttctagggaccactcgagtactatagcaagtgagaatgggaatgatgggtccggtgctcttcagccagttcaaatagctattccaggaccttctctattccaggaccttctctttaacattattgatctttcaccaaactgggcgtatgaaaactctgaaacagaggttcttgttgtgggaaagttcttgaagaaccaagaattagaaagttttaagtggtcatgtatgtttggggaagtagaagtccccgctgaggttgtagcagacggtgttcttcgttgttatacgcccgtacatagggctgctaggattcctttctatgtaacacgttccaataggttaccctgtagtgaagtgagaatatttgagtaccgagtcaaccaaattcaagacggctgcgaagacgatacacttgttatgcgttttggaagaatactgtccccaagctttacgtattcaagttttaatccacaggataaatatagacaatatgatcctatcagtgtagttgagaaatttgatttgactcgtaaaattagttcattgctaaaaaacggcaatgaggaaagagctgagatgataaagctatttccagatgagttttccttggatagagtaaaggcgcagttgcttcaacagtttcttaaagacaagtttcgtaaatggctcttgcagaagatggctgttggtggaaatggcttaggggtactagacgaaggtggccagggtgtgttacatgttggagctgctcttggctatgactgggtctttttacccatgacaatggctggagttactgtcaattttcctgatgtgaatggatggacggcacttcattgggcagcttttcgtggcagagagagcgcagtttctttgctcatcggacttggtgcagctcctggagcattaacggatccatgtaccaaaagtcccacaggcaaaacaccagcggacctagcttctgaaaagggttacaaaggaatagctgcttatctttcatcagtacttatactggatatcaatgatgcaaattctgcagggagttcaagagaaaaattagtccaaccagttccagaacgaattccagcttttagcagcgatggggatttagatgatgggctttccatgagggcccatgtaacaggtcaccaggtgaagaaaaactatggcatgggctgggctggaagaactgttgggatggttttgcgttggagaggacgagggaaacgaagaaggttgggctataagaacctttgggatgattatgccctcataaatattagttatgactttctaaagattcaggcccatgtaacagatcacctggtgaagaaaaactatggtatgggctgggctgtaagaactgttgggatgattttgcgttggagaggacgagggaaacgaagaaggttgggctataagaacctttgggatcatgattgtatcaggacccttcggccaactacaactataggctctatgtgggagtgggcgactcgaagcataagccgccgtcgcggaggtagaggaggaggggggagcttctgggtcagatcagcggatttgggtaggaatatgccggccgagatgggtgggttggtggatacggaagaaaaggaactcgtgttagatgtcggagtgatcggcgacggcggctattggagaaatggacttggcaatgatctcataattgattcctcaacaaaatctgtccacagagaaaaggcttccctagatcgtagttcaactgctgattcatcattggttgctgatggaaagtcaggaattacttacagcaatggtgatcatgaaattgaatctgttttcacccacggcgaagatgaacatgcaagaagtcccaatggcagtctagctggaaggactgctgtagacagcccgtctggagagttcttgcttcgtggctcagattctgagaagcacaaagatttctttggatctgatgactatggtgtcaacccagtaagaactggatcccccaatgcagatactgcctttcagaagaagagcattttctttgaagactctgttcctagcacaccagtctcgaggtttgccaactcgccaagatatagtcaccaggtgaagaaaaactatggtatgggctgggctataagaactgttggcatgattttgcgttggagaggacgaggaaaacgaagaaggttgggctataagtacttttgggatgattatctgcagcttagtgagagcccttataagcccatatacaagttcacctgtgtgttgcgttggttaggcctagaaccacctagtgggggcccttatgattatgaatttctcaaaattcaggctcatataacagaaggtaatgttgttgatgaactctcccatgtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 CG-1 IQ TIG

Protein Analysis

1023

Amino Acids

114.97

Weight (kDa)

8.52

Isoelectric Point (pI)

48.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2931
AasI GACNNNNNNGTC 1 cut(s) 2663
AccB7I CCANNNNNTGG 2 cut(s) 158, 2987
AccI GTMKAC 1 cut(s) 2583
AccII CGCG 1 cut(s) 2211
AciI CCGC 8 cut(s) 5, 47, 942, 1643, 2203, 2211, 2252, 2346
AclWI GGATC 8 cut(s) 169, 1181, 1601, 1614, 2133, 2656, 2679, 2692
AcoI YGGCCR 3 cut(s) 1414, 2150, 2274
AcsI RAATTY 9 cut(s) 93, 328, 553, 1077, 1208, 1723, 1773, 3008, 3018
AcuI CTGAAG 2 cut(s) 432, 737
AdeI CACNNNGTG 4 cut(s) 1846, 2020, 2794, 2987
AfaI GTAC 8 cut(s) 487, 712, 987, 1064, 1401, 1615, 1698, 2891
AfiI CCNNNNNNNGG 7 cut(s) 158, 264, 696, 946, 990, 2987, 2990
AflIII ACRYGT 2 cut(s) 1019, 1429
AhdI GACNNNNNGTC 1 cut(s) 2590
AjnI CCWGG 9 cut(s) 496, 531, 775, 792, 1416, 1591, 1842, 2016, 2790
AleI CACNNNNGTG 1 cut(s) 2954
Alw21I GWGCWC 2 cut(s) 192, 751
Alw26I GTCTC 2 cut(s) 660, 2761
AlwI GGATC 8 cut(s) 169, 1181, 1601, 1614, 2133, 2656, 2679, 2692
AlwNI CAGNNNCTG 4 cut(s) 470, 1592, 2624, 2702
Ama87I CYCGRG 2 cut(s) 706, 2758
AoxI GGCC 8 cut(s) 536, 1414, 1824, 1998, 2150, 2274, 2971, 2992
ApaI GGGCCC 3 cut(s) 540, 1828, 2996
ApeKI GCWGC 8 cut(s) 995, 1089, 1439, 1535, 1586, 1679, 1788, 2911
ApoI RAATTY 9 cut(s) 93, 328, 553, 1077, 1208, 1723, 1773, 3008, 3018
Asp700I GAANNNNTTC 2 cut(s) 105, 1773
AspLEI GCGC 2 cut(s) 1318, 1559
AsuII TTCGAA 1 cut(s) 99
AvaI CYCGRG 2 cut(s) 706, 2758
AvaII GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1645, 2142
BaeGI GKGCMC 3 cut(s) 540, 1828, 2996
BaeI ACNNNNGTAYC 2 cut(s) 1092, 1125
BalI TGGCCA 1 cut(s) 1416
BamHI GGATCC 2 cut(s) 1606, 2684
BanII GRGCYC 4 cut(s) 540, 1828, 2927, 2996
BauI CACGAG 1 cut(s) 2315
BbsI GAAGAC 2 cut(s) 1101, 2739
Bbv12I GWGCWC 2 cut(s) 192, 751
BbvCI CCTCAGC 1 cut(s) 945
BbvI GCAGC 8 cut(s) 982, 1076, 1426, 1547, 1598, 1666, 1800, 2923
BceAI ACGGC 6 cut(s) 1102, 1264, 1536, 2190, 2359, 2542
BciT130I CCWGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
BciVI GTATCC 1 cut(s) 2290
BclI TGATCA 3 cut(s) 31, 640, 2497
BcoDI GTCTC 2 cut(s) 660, 2761
BfmI CTRYAG 9 cut(s) 141, 214, 680, 714, 1039, 1728, 2163, 2580, 2909
BfuI GTATCC 1 cut(s) 2290
BmcAI AGTACT 4 cut(s) 487, 712, 1698, 2891
Bme1390I CCNGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
Bme18I GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1645, 2142
BmeRI GACNNNNNGTC 1 cut(s) 2590
BmeT110I CYCGRG 2 cut(s) 706, 2758
BmrFI CCNGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
BmrI ACTGGG 3 cut(s) 841, 1465, 2666
BmsI GCATC 2 cut(s) 79, 1708
BmuI ACTGGG 3 cut(s) 841, 1465, 2666
BpiI GAAGAC 2 cut(s) 1101, 2739
BplI GAGNNNNNCTC 2 cut(s) 353, 385
BpmI CTGGAG 5 cut(s) 297, 519, 1503, 1614, 2616
Bpu10I CCTNAGC 3 cut(s) 191, 945, 1393
Bpu14I TTCGAA 1 cut(s) 99
BpuEI CTTGAG 1 cut(s) 254
Bsa29I ATCGAT 1 cut(s) 73
BsaAI YACGTR 1 cut(s) 1146
BsaBI GATNNNNATC 1 cut(s) 2904
BsaI GGTCTC 1 cut(s) 660
BsaJI CCNNGG 7 cut(s) 310, 496, 531, 532, 1299, 1417, 2524
BsaWI WCCGGW 1 cut(s) 743
BsaXI ACNNNNNCTCC 2 cut(s) 1476, 1506
Bsc4I CCNNNNNNNGG 7 cut(s) 158, 264, 696, 946, 990, 2987, 2990
Bse118I RCCGGY 1 cut(s) 2272
Bse3DI GCAATG 5 cut(s) 295, 1235, 1258, 2377, 2497
Bse8I GATNNNNATC 1 cut(s) 2904
BseBI CCWGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
BseCI ATCGAT 1 cut(s) 73
BseDI CCNNGG 7 cut(s) 310, 496, 531, 532, 1299, 1417, 2524
BseGI GGATG 7 cut(s) 357, 431, 1520, 1896, 1957, 2070, 2905
BseJI GATNNNNATC 1 cut(s) 2904
BseLI CCNNNNNNNGG 7 cut(s) 158, 264, 696, 946, 990, 2987, 2990
BseMI GCAATG 5 cut(s) 295, 1235, 1258, 2377, 2497
BseMII CTCAG 6 cut(s) 205, 666, 936, 1257, 2616, 2631
BseRI GAGGAG 4 cut(s) 294, 516, 2235, 2238
BseSI GKGCMC 3 cut(s) 540, 1828, 2996
BseX3I CGGCCG 1 cut(s) 2274
BseXI GCAGC 8 cut(s) 982, 1076, 1426, 1547, 1598, 1666, 1800, 2923
BseYI CCCAGC 3 cut(s) 1869, 2043, 2817
BsgI GTGCAG 1 cut(s) 1605
Bsh1236I CGCG 1 cut(s) 2211
Bsh1285I CGRYCG 1 cut(s) 2277
BshFI GGCC 8 cut(s) 538, 1416, 1826, 2000, 2152, 2276, 2973, 2994
BshVI ATCGAT 1 cut(s) 73
BsiEI CGRYCG 1 cut(s) 2277
BsiHKAI GWGCWC 2 cut(s) 192, 751
BsiHKCI CYCGRG 2 cut(s) 706, 2758
BsiSI CCGG 2 cut(s) 744, 2273
BslFI GGGAC 5 cut(s) 713, 923, 1117, 1608, 2535
BslI CCNNNNNNNGG 7 cut(s) 158, 264, 696, 946, 990, 2987, 2990
BsmAI GTCTC 2 cut(s) 660, 2761
BsmFI GGGAC 5 cut(s) 713, 923, 1117, 1608, 2535
BsmI GAATGC 1 cut(s) 460
BsnI GGCC 8 cut(s) 538, 1416, 1826, 2000, 2152, 2276, 2973, 2994
Bso31I GGTCTC 1 cut(s) 660
BsoBI CYCGRG 2 cut(s) 706, 2758
Bsp119I TTCGAA 1 cut(s) 99
Bsp120I GGGCCC 3 cut(s) 536, 1824, 2992
Bsp1286I GDGCHC 6 cut(s) 192, 540, 751, 1828, 2927, 2996
Bsp19I CCATGG 1 cut(s) 310
BspACI CCGC 8 cut(s) 5, 47, 942, 1643, 2203, 2211, 2252, 2346
BspANI GGCC 8 cut(s) 538, 1416, 1826, 2000, 2152, 2276, 2973, 2994
BspCNI CTCAG 6 cut(s) 204, 667, 937, 1258, 2617, 2630
BspDI ATCGAT 1 cut(s) 73
BspFNI CGCG 1 cut(s) 2211
BspHI TCATGA 2 cut(s) 2128, 2500
BspMAI CTGCAG 3 cut(s) 145, 1732, 2913
BspPI GGATC 8 cut(s) 169, 1181, 1601, 1614, 2133, 2656, 2679, 2692
BspQI GCTCTTC 3 cut(s) 354, 756, 2711
BspT104I TTCGAA 1 cut(s) 99
BspTNI GGTCTC 1 cut(s) 660
BsrDI GCAATG 5 cut(s) 295, 1235, 1258, 2377, 2497
BsrFI RCCGGY 1 cut(s) 2272
BssAI RCCGGY 1 cut(s) 2272
BssECI CCNNGG 7 cut(s) 310, 496, 531, 532, 1299, 1417, 2524
BssSI CACGAG 1 cut(s) 2315
BssT1I CCWWGG 2 cut(s) 310, 1299
Bst2BI CACGAG 1 cut(s) 2315
Bst2UI CCWGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
Bst4CI ACNGT 8 cut(s) 635, 962, 1131, 1332, 1492, 1885, 2059, 2833
Bst6I CTCTTC 3 cut(s) 354, 756, 2711
BstAPI GCANNNNNTGC 3 cut(s) 479, 1727, 2702
BstBAI YACGTR 1 cut(s) 1146
BstBI TTCGAA 1 cut(s) 99
BstC8I GCNNGC 2 cut(s) 141, 2274
BstDEI CTNAG 8 cut(s) 191, 675, 945, 1266, 1393, 2617, 2625, 2915
BstDSI CCRYGG 2 cut(s) 310, 2524
BstEII GGTNACC 2 cut(s) 1032, 1838
BstF5I GGATG 7 cut(s) 357, 431, 1520, 1896, 1957, 2070, 2905
BstFNI CGCG 1 cut(s) 2211
BstHHI GCGC 2 cut(s) 1318, 1559
BstMAI GTCTC 2 cut(s) 660, 2761
BstMCI CGRYCG 1 cut(s) 2277
BstNI CCWGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
BstNSI RCATGY 2 cut(s) 1433, 2543
BstPI GGTNACC 2 cut(s) 1032, 1838
BstSCI CCNGG 9 cut(s) 496, 531, 775, 792, 1416, 1591, 1842, 2016, 2790
BstSFI CTRYAG 9 cut(s) 141, 214, 680, 714, 1039, 1728, 2163, 2580, 2909
BstSLI GKGCMC 3 cut(s) 540, 1828, 2996
BstSNI TACGTA 1 cut(s) 1146
BstUI CGCG 1 cut(s) 2211
BstV1I GCAGC 8 cut(s) 982, 1076, 1426, 1547, 1598, 1666, 1800, 2923
BstV2I GAAGAC 2 cut(s) 1101, 2739
BstX2I RGATCY 3 cut(s) 1606, 2648, 2684
BstXI CCANNNNNNTGG 1 cut(s) 1477
BstYI RGATCY 3 cut(s) 1606, 2648, 2684
BstZI CGGCCG 1 cut(s) 2274
Bsu15I ATCGAT 1 cut(s) 73
BsuI GTATCC 1 cut(s) 2290
BsuRI GGCC 8 cut(s) 538, 1416, 1826, 2000, 2152, 2276, 2973, 2994
BsuTUI ATCGAT 1 cut(s) 73
BtgI CCRYGG 2 cut(s) 310, 2524
BtgZI GCGATG 1 cut(s) 1806
BtsCI GGATG 7 cut(s) 357, 431, 1520, 1896, 1957, 2070, 2905
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 2 cut(s) 252, 1201
Cac8I GCNNGC 2 cut(s) 141, 2274
CaiI CAGNNNCTG 4 cut(s) 470, 1592, 2624, 2702
CciI TCATGA 2 cut(s) 2128, 2500
CfoI GCGC 2 cut(s) 1318, 1559
Cfr10I RCCGGY 1 cut(s) 2272
ClaI ATCGAT 1 cut(s) 73
CseI GACGC 2 cut(s) 11, 348
CsiI ACCWGGT 3 cut(s) 1842, 2016, 2790
Csp6I GTAC 8 cut(s) 486, 711, 986, 1063, 1400, 1614, 1697, 2890
CviQI GTAC 8 cut(s) 486, 711, 986, 1063, 1400, 1614, 1697, 2890
DdeI CTNAG 8 cut(s) 191, 675, 945, 1266, 1393, 2617, 2625, 2915
DraIII CACNNNGTG 4 cut(s) 1846, 2020, 2794, 2987
DrdI GACNNNNNNGTC 1 cut(s) 2663
DriI GACNNNNNGTC 1 cut(s) 2590
DseDI GACNNNNNNGTC 1 cut(s) 2663
EaeI YGGCCR 3 cut(s) 1414, 2150, 2274
EagI CGGCCG 1 cut(s) 2274
Eam1104I CTCTTC 3 cut(s) 354, 756, 2711
Eam1105I GACNNNNNGTC 1 cut(s) 2590
EarI CTCTTC 3 cut(s) 354, 756, 2711
EclXI CGGCCG 1 cut(s) 2274
Eco105I TACGTA 1 cut(s) 1146
Eco130I CCWWGG 2 cut(s) 310, 1299
Eco147I AGGCCT 1 cut(s) 2973
Eco24I GRGCYC 4 cut(s) 540, 1828, 2927, 2996
Eco31I GGTCTC 1 cut(s) 660
Eco32I GATATC 1 cut(s) 1711
Eco47I GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1645, 2142
Eco52I CGGCCG 1 cut(s) 2274
Eco57I CTGAAG 2 cut(s) 432, 737
Eco88I CYCGRG 2 cut(s) 706, 2758
Eco91I GGTNACC 2 cut(s) 1032, 1838
EcoO109I RGGNCCY 8 cut(s) 536, 537, 779, 796, 1824, 2142, 2992, 2993
EcoO65I GGTNACC 2 cut(s) 1032, 1838
EcoRI GAATTC 1 cut(s) 1773
EcoRII CCWGG 9 cut(s) 496, 531, 775, 792, 1416, 1591, 1842, 2016, 2790
EcoRV GATATC 1 cut(s) 1711
EcoT14I CCWWGG 2 cut(s) 310, 1299
EcoT22I ATGCAT 1 cut(s) 462
EcoT38I GRGCYC 4 cut(s) 540, 1828, 2927, 2996
ErhI CCWWGG 2 cut(s) 310, 1299
FaqI GGGAC 5 cut(s) 713, 923, 1117, 1608, 2535
FauI CCCGC 1 cut(s) 949
FauNDI CATATG 1 cut(s) 549
FbaI TGATCA 3 cut(s) 31, 640, 2497
FblI GTMKAC 1 cut(s) 2583
FokI GGATG 7 cut(s) 364, 418, 1527, 1903, 1964, 2077, 2912
FriOI GRGCYC 4 cut(s) 540, 1828, 2927, 2996
GlaI GCGC 2 cut(s) 1317, 1558
GsaI CCCAGC 3 cut(s) 1873, 2047, 2821
GsuI CTGGAG 5 cut(s) 297, 519, 1503, 1614, 2616
HaeIII GGCC 8 cut(s) 538, 1416, 1826, 2000, 2152, 2276, 2973, 2994
HapII CCGG 2 cut(s) 744, 2273
HgaI GACGC 2 cut(s) 11, 348
HhaI GCGC 2 cut(s) 1318, 1559
Hin6I GCGC 2 cut(s) 1316, 1557
HinP1I GCGC 2 cut(s) 1316, 1557
HincII GTYRAC 2 cut(s) 1072, 2668
HindII GTYRAC 2 cut(s) 1072, 2668
HindIII AAGCTT 1 cut(s) 1138
HpaII CCGG 2 cut(s) 744, 2273
Hpy166II GTNNAC 6 cut(s) 388, 1072, 2407, 2584, 2668, 2949
Hpy8I GTNNAC 6 cut(s) 388, 1072, 2407, 2584, 2668, 2949
Hpy99I CGWCG 2 cut(s) 2211, 2345
HpyCH4III ACNGT 8 cut(s) 635, 962, 1131, 1332, 1492, 1885, 2059, 2833
HpyCH4IV ACGT 4 cut(s) 82, 186, 1021, 1145
HpyF3I CTNAG 8 cut(s) 191, 675, 945, 1266, 1393, 2617, 2625, 2915
HpySE526I ACGT 4 cut(s) 82, 186, 1021, 1145
HspAI GCGC 2 cut(s) 1316, 1557
KroI GCCGGC 1 cut(s) 2272
KroNI GCCGGC 1 cut(s) 2274
Ksp22I TGATCA 3 cut(s) 31, 640, 2497
LguI GCTCTTC 3 cut(s) 354, 756, 2711
LmnI GCTCC 5 cut(s) 136, 1436, 1594, 1595, 2232
Lsp1109I GCAGC 8 cut(s) 982, 1076, 1426, 1547, 1598, 1666, 1800, 2923
LweI GCATC 2 cut(s) 79, 1708
MabI ACCWGGT 3 cut(s) 1842, 2016, 2790
MaeII ACGT 4 cut(s) 82, 186, 1021, 1145
MflI RGATCY 3 cut(s) 1606, 2648, 2684
MhlI GDGCHC 6 cut(s) 192, 540, 751, 1828, 2927, 2996
MlsI TGGCCA 1 cut(s) 1416
MluNI TGGCCA 1 cut(s) 1416
MlyI GAGTC 5 cut(s) 513, 1077, 1213, 2182, 2729
MmeI TCCRAC 6 cut(s) 1414, 1780, 1883, 2057, 2308, 2831
Mox20I TGGCCA 1 cut(s) 1416
Mph1103I ATGCAT 1 cut(s) 462
MroNI GCCGGC 1 cut(s) 2272
MroXI GAANNNNTTC 2 cut(s) 105, 1773
MscI TGGCCA 1 cut(s) 1416
MseI TTAA 5 cut(s) 807, 906, 1158, 1338, 1601
MslI CAYNNNNRTG 2 cut(s) 1475, 2954
Msp20I TGGCCA 1 cut(s) 1416
MspA1I CMGCKG 3 cut(s) 944, 1643, 2252
MspI CCGG 2 cut(s) 744, 2273
MspR9I CCNGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
Mva1269I GAATGC 1 cut(s) 460
MvaI CCWGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
MvnI CGCG 1 cut(s) 2211
NaeI GCCGGC 1 cut(s) 2274
NcoI CCATGG 1 cut(s) 310
NdeI CATATG 1 cut(s) 549
NgoMIV GCCGGC 1 cut(s) 2272
NmeAIII GCCGAG 1 cut(s) 2302
NmuCI GTSAC 2 cut(s) 1838, 2786
NsiI ATGCAT 1 cut(s) 462
NspI RCATGY 2 cut(s) 1433, 2543
NspV TTCGAA 1 cut(s) 99
OliI CACNNNNGTG 1 cut(s) 2954
PaeR7I CTCGAG 2 cut(s) 706, 2758
PagI TCATGA 2 cut(s) 2128, 2500
PasI CCCWGGG 1 cut(s) 532
PceI AGGCCT 1 cut(s) 2973
PciI ACATGT 1 cut(s) 1429
PciSI GCTCTTC 3 cut(s) 354, 756, 2711
PcsI WCGNNNNNNNCGW 4 cut(s) 79, 1918, 2092, 2866
PctI GAATGC 1 cut(s) 460
PdiI GCCGGC 1 cut(s) 2274
PdmI GAANNNNTTC 2 cut(s) 105, 1773
PfeI GAWTC 8 cut(s) 572, 625, 1003, 1993, 2387, 2447, 2510, 2621
PflFI GACNNNGTC 2 cut(s) 21, 1457
PflMI CCANNNNNTGG 2 cut(s) 158, 2987
PfoI TCCNGGA 3 cut(s) 775, 792, 1591
PleI GAGTC 5 cut(s) 512, 1076, 1213, 2182, 2729
PpsI GAGTC 5 cut(s) 512, 1076, 1213, 2182, 2729
Ppu21I YACGTR 1 cut(s) 1146
PpuMI RGGWCCY 3 cut(s) 779, 796, 2142
PscI ACATGT 1 cut(s) 1429
PsiI TTATAA 1 cut(s) 2931
Psp5II RGGWCCY 3 cut(s) 779, 796, 2142
Psp6I CCWGG 9 cut(s) 496, 531, 775, 792, 1416, 1591, 1842, 2016, 2790
PspEI GGTNACC 2 cut(s) 1032, 1838
PspFI CCCAGC 3 cut(s) 1869, 2043, 2817
PspGI CCWGG 9 cut(s) 496, 531, 775, 792, 1416, 1591, 1842, 2016, 2790
PspOMI GGGCCC 3 cut(s) 536, 1824, 2992
PspPPI RGGWCCY 3 cut(s) 779, 796, 2142
PspXI VCTCGAGB 1 cut(s) 706
PsrI GAACNNNNNNTAC 2 cut(s) 1216, 1248
PstI CTGCAG 3 cut(s) 145, 1732, 2913
PstNI CAGNNNCTG 4 cut(s) 470, 1592, 2624, 2702
PsuI RGATCY 3 cut(s) 1606, 2648, 2684
PsyI GACNNNGTC 2 cut(s) 21, 1457
RsaI GTAC 8 cut(s) 487, 712, 987, 1064, 1401, 1615, 1698, 2891
RsaNI GTAC 8 cut(s) 486, 711, 986, 1063, 1400, 1614, 1697, 2890
RseI CAYNNNNRTG 2 cut(s) 1475, 2954
SapI GCTCTTC 3 cut(s) 354, 756, 2711
SaqAI TTAA 5 cut(s) 807, 906, 1158, 1338, 1601
ScaI AGTACT 4 cut(s) 487, 712, 1698, 2891
SchI GAGTC 5 cut(s) 513, 1077, 1213, 2182, 2729
ScrFI CCNGG 9 cut(s) 498, 533, 777, 794, 1418, 1593, 1844, 2018, 2792
SduI GDGCHC 6 cut(s) 192, 540, 751, 1828, 2927, 2996
SexAI ACCWGGT 3 cut(s) 1842, 2016, 2790
SfaNI GCATC 2 cut(s) 79, 1708
SfcI CTRYAG 9 cut(s) 141, 214, 680, 714, 1039, 1728, 2163, 2580, 2909
Sfr274I CTCGAG 2 cut(s) 706, 2758
SfuI TTCGAA 1 cut(s) 99
SinI GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1645, 2142
SlaI CTCGAG 2 cut(s) 706, 2758
SmiMI CAYNNNNRTG 2 cut(s) 1475, 2954
SmlI CTYRAG 3 cut(s) 269, 706, 2758
SmoI CTYRAG 3 cut(s) 269, 706, 2758
SnaBI TACGTA 1 cut(s) 1146
SseBI AGGCCT 1 cut(s) 2973
SsiI CCGC 8 cut(s) 5, 47, 942, 1643, 2203, 2211, 2252, 2346
SspI AATATT 3 cut(s) 618, 1056, 1972
StuI AGGCCT 1 cut(s) 2973
StyD4I CCNGG 9 cut(s) 496, 531, 775, 792, 1416, 1591, 1842, 2016, 2790
StyI CCWWGG 2 cut(s) 310, 1299
TaaI ACNGT 8 cut(s) 635, 962, 1131, 1332, 1492, 1885, 2059, 2833
TaiI ACGT 4 cut(s) 85, 189, 1024, 1148
TaqI TCGA 7 cut(s) 73, 99, 155, 613, 707, 2191, 2759
TatI WGTACW 4 cut(s) 485, 710, 1696, 2889
TauI GCSGC 3 cut(s) 8, 2205, 2349
TfiI GAWTC 8 cut(s) 572, 625, 1003, 1993, 2387, 2447, 2510, 2621
Tru1I TTAA 5 cut(s) 807, 906, 1158, 1338, 1601
Tru9I TTAA 5 cut(s) 807, 906, 1158, 1338, 1601
TscAI CASTG 2 cut(s) 252, 1201
TseFI GTSAC 2 cut(s) 1838, 2786
TseI GCWGC 8 cut(s) 995, 1089, 1439, 1535, 1586, 1679, 1788, 2911
Tsp45I GTSAC 2 cut(s) 1838, 2786
TspGWI ACGGA 2 cut(s) 1619, 2315
TspRI CASTG 2 cut(s) 252, 1201
Tth111I GACNNNGTC 2 cut(s) 21, 1457
Van91I CCANNNNNTGG 2 cut(s) 158, 2987
VpaK11BI GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1645, 2142
XapI RAATTY 9 cut(s) 93, 328, 553, 1077, 1208, 1723, 1773, 3008, 3018
XceI RCATGY 2 cut(s) 1433, 2543
XhoI CTCGAG 2 cut(s) 706, 2758
XmiI GTMKAC 1 cut(s) 2583
XmnI GAANNNNTTC 2 cut(s) 105, 1773
ZrmI AGTACT 4 cut(s) 487, 712, 1698, 2891
Zsp2I ATGCAT 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.