Rh2CG245300

Calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001949
Physical Location & Seq
Reverse (-)
25776646 .. 25787416
10771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG245300.1

Sequence Viewer

Length: 2604 bp
ATGCTTGAAGAGGACCTCTCGCACATTGTTCTCGTCCACTACCGGGAAGTAAAGGGAAATAGGACAAATTTCAATCATGTTAAAGAGACTGAAGATGATTTTCAAGAAAAGTTGTCAACCATTCCTGGGGTGGATTTTAGCTCACTCTCTCAAGCATATAAGAGGGAAGATAGTATTGATGCTGGAGATATCTATGAGCCCAGGAAAGATCGTGAATTTGCATTATGGGACGATATGGAAAACAGTGCTGCTGGCATTCAATCTTTTCAGTCATCATTTTCAGCAACACATTCTGATACAATGGGAAGCTTTCCTAAGATTGAGACGATTGGGCATCTTTATACAGACAGTTTTGATAAAAGGGTTGTGTATGGGACTGAAAATAGACCAAAGGTCCAACAAAGTTGGCAGACTTCTGAAGGATCATCAAACTGGCCTATGGATCAGAGCTTGCAATCACATACAGAATACAATGTCACCGCTAAGCTCGATGAAGGAGCCGATACCACTGATTTACTCAAGTCCTTGGGGCCTTTCCTTGTGGATTCAGACAAGCAACATGACCTTCAATTTCATCTTTCACACGCAGATACTATTTCAAAGAGAAATGATAACATTGAGGGAAAAGCTGATCACCCTTCTGCTATTAAGCCTCTGTTGGGATTCGATGATGGTCTGAAGAAGCTCGACAGTTTCAACCGATGGATGAGTAAAGAACTTGAAGATGTGGATGAGCCACAAATGCAGTCCAGTTCTGGAGCCTACTGGGAAACTGTTGAAAGTGAGAATGAAGTTGATGAGTCCAGTGTTCCCTTGCAAGTACGCTTGGATAGCTATATGTTGGGGCCTTCTCTTTCTCATGACCAGCTCTTTAGCATTGTTGATTTCTCACCAAACTGGGCATATGAAAACTCTGAAATCAAGGTTTTGATCACAGGAAAATTTTTGAAAAGTCAACATGCAGAAAGTTGTAAATGGTCATGTATGTTTGGGGAAGTTGAAGTTCCTGCTGAGGTTATAGCAGATGGTGTTCTTCGTTGTTATACTCCCATCCACAAGGCTGGAAGGGTTCCGTTTTATGTGACATGTTCCAATAGGCTGGCTTGTAGTGAAGTAAGGGAATTTGAATACCGGGTAGCCCAAATTCAAGATGTTGATTCTAAAGATTATTACAGTGACTGCTCAAATGAAACACTCAGTATGCGCTTCGGAAAATTATTGTCTTTAAGCTCTACCTCACCTAATTGTGATTCAGCAAGTACGGCAGAGAATTCTGAGTTGACTGCTAAAATTACTTCTATGCTGAAAAATGACAATGATGAATGGGACAAGATGCTACAACTTACGTCAGACGAGGACTTTTCCTTGGAAAGAGTAGAGGATCAGTTGCTTCAACAGTTACTTAAGGAGAAGTTGCATGCATGGCTCTTGCAGAAGCTGGCTGCTGGTGGTAAAGGCCCTAGTGTTCTAGACGAGGGTGGCCAAGGTGTGTTACATTTTGGAGCTGCTCTTGGCTATGACTGGGTCTTACTGCCCACAATAACTGCTGGAGTTAGCGTCAATTTTCGTGATGTGAATGGATGGACGGCACTTCATTGGGCAGCTTTTTGTGGCAGAGAGCGCACAGTCGCTTCTCTCATCTCCCTGGGTGCGGCTCCTGGAGCATTAACAGATCCAACTACCAAATATCCTTCAGGAGAAACACCTGCAGACCTAGCTTCTGAACAAGGACACAAAGGGATTGCTGGATATCTTGCAGAATCTGCTTTGAGTGCCCACCTTGAATCTCTTAATTTGGATCTCAAGAACGGAAATTCGGCAGAGACTTCAGGAACAAAAGCAGTTTCAGGTTCTAGCAGGGATGGGGAATTAACGGATGGGCTTTCCCTGAGGGATTCTTTAACTGCTGTCTGTAATGCGACACAAGCTGCTGCTCGTATTCATCAAGTGTTCAGGGTACAATCTTTCCAAAGGAAGCAGTTGAAAGAGTACGATGGTGATAAATTTGGATTTTCCAATGAACGGGCATTATCACTTATTGCACTCAAGTCACATAAGGCAGGGAAACGTGATGAGCATGTGGATGCGGCAGCAGTACGAATACAAAATAAGTTCCGTAGTTGGAAGGGTAGAAAAGACTATTTGATAATCCGACAACGGATTGTCAAAATTCAGGCCCATGTAAGAGGTCACCAGGTGAGGAAAAACTATAGAAAGATAGTGTGGTCTGTCGGAATTGTAGAGAAGATCATCCTGCGTTGGAGAAGAAAAGGAAGTGGGTTGCGTGGGTTCAAGCCAGAACCTGTTACTGAGGGCCCCAGCATGCAAGTTTCATCCACAAAGGATGATGATTATGACGTACTGAAAGAAGGAAGGAAGCAAACAGAGGAAAGGCTGCAAAAGGCACTTGCTAGGGTGAAATCCATGGTTCAGTATCCTGAAGCAAGAGATCAATACCATCGACTTTTAAATGTTGTCACTGAGATTCAGGAAACCAAGGTGCTGAATAGTTCAGAAGGGACATCAACTTATATGGATGATGACCTCATAGACATTGAAGCGTTGTTCGATGATGACGTTTTGATGCCTACAGCAGCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 CG-1 IQ TIG

Protein Analysis

867

Amino Acids

97.04

Weight (kDa)

5.25

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIG PF01833 293 - 369 9.8e-06 IPT/TIG domain
Ank_2 PF12796 500 - 588 5.6e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1714
Acc36I ACCTGC 1 cut(s) 1714
AciI CCGC 3 cut(s) 480, 1652, 2087
AclWI GGATC 5 cut(s) 430, 450, 1389, 1667, 1806
AcoI YGGCCR 1 cut(s) 1480
AcsI RAATTY 9 cut(s) 67, 215, 941, 1121, 1143, 1270, 1813, 2003, 2169
AcuI CTGAAG 6 cut(s) 111, 438, 698, 1677, 1812, 2460
AdeI CACNNNGTG 1 cut(s) 2197
AfaI GTAC 6 cut(s) 822, 1261, 1959, 1991, 2097, 2361
AfiI CCNNNNNNNGG 5 cut(s) 43, 126, 659, 1651, 2022
AflII CTTAAG 1 cut(s) 1403
AflIII ACRYGT 1 cut(s) 1085
AhdI GACNNNNNGTC 1 cut(s) 392
AjnI CCWGG 5 cut(s) 124, 200, 1644, 1657, 2193
Alw26I GTCTC 3 cut(s) 80, 317, 1817
AlwI GGATC 5 cut(s) 430, 450, 1389, 1667, 1806
AlwNI CAGNNNCTG 4 cut(s) 1179, 1438, 1763, 2303
AoxI GGCC 7 cut(s) 434, 530, 845, 1456, 1480, 2175, 2314
ApaI GGGCCC 1 cut(s) 2318
ApeKI GCWGC 9 cut(s) 248, 1442, 1505, 1601, 1928, 1931, 2090, 2395, 2594
ApoI RAATTY 9 cut(s) 67, 215, 941, 1121, 1143, 1270, 1813, 2003, 2169
AspLEI GCGC 2 cut(s) 1206, 1623
AspS9I GGNCC 8 cut(s) 13, 394, 530, 845, 1457, 2176, 2314, 2315
AsuC2I CCSGG 2 cut(s) 44, 1133
AsuHPI GGTGA 8 cut(s) 469, 626, 882, 1230, 2009, 2183, 2209, 2428
AvaII GGWCC 2 cut(s) 13, 394
AxyI CCTNAGG 1 cut(s) 1889
BaeGI GKGCMC 2 cut(s) 1777, 2318
BalI TGGCCA 1 cut(s) 1482
BanII GRGCYC 2 cut(s) 201, 2318
BbvCI CCTCAGC 1 cut(s) 1011
BbvI GCAGC 8 cut(s) 235, 1429, 1492, 1613, 1915, 1918, 2102, 2382
BccI CCATC 9 cut(s) 665, 696, 1019, 1058, 1575, 1856, 1871, 1988, 2466
BceAI ACGGC 2 cut(s) 1278, 1602
BciT130I CCWGG 5 cut(s) 126, 202, 1646, 1659, 2195
BciVI GTATCC 1 cut(s) 2445
BclI TGATCA 2 cut(s) 631, 930
BcnI CCSGG 2 cut(s) 44, 1133
BcoDI GTCTC 3 cut(s) 80, 317, 1817
BfaI CTAG 5 cut(s) 1461, 1469, 1715, 1854, 2412
BfmI CTRYAG 3 cut(s) 1707, 2209, 2589
BfrI CTTAAG 1 cut(s) 1403
BfuAI ACCTGC 1 cut(s) 1714
BfuI GTATCC 1 cut(s) 2445
BlpI GCTNAGC 1 cut(s) 483
Bme1390I CCNGG 7 cut(s) 44, 126, 202, 1133, 1646, 1659, 2195
Bme18I GGWCC 2 cut(s) 13, 394
BmeRI GACNNNNNGTC 1 cut(s) 392
BmgT120I GGNCC 8 cut(s) 13, 394, 530, 845, 1457, 2176, 2314, 2315
BmiI GGNNCC 8 cut(s) 499, 531, 760, 846, 1071, 1656, 2316, 2317
BmrFI CCNGG 7 cut(s) 44, 126, 202, 1133, 1646, 1659, 2195
BmrI ACTGGG 3 cut(s) 775, 907, 1531
BmsI GCATC 5 cut(s) 169, 343, 1323, 2074, 2574
BmuI ACTGGG 3 cut(s) 775, 907, 1531
BplI GAGNNNNNCTC 1 cut(s) 34
BpmI CTGGAG 4 cut(s) 204, 777, 1569, 1680
Bpu10I CCTNAGC 1 cut(s) 1011
Bpu1102I GCTNAGC 1 cut(s) 483
BpuEI CTTGAG 4 cut(s) 135, 503, 1787, 2030
BpuMI CCSGG 2 cut(s) 44, 1133
BsaJI CCNNGG 9 cut(s) 125, 200, 525, 1365, 1483, 1644, 1645, 2424, 2496
BsaXI ACNNNNNCTCC 2 cut(s) 1542, 1572
Bsc4I CCNNNNNNNGG 5 cut(s) 43, 126, 659, 1651, 2022
Bse1I ACTGG 6 cut(s) 437, 750, 770, 804, 902, 1526
Bse21I CCTNAGG 1 cut(s) 1889
BseBI CCWGG 5 cut(s) 126, 202, 1646, 1659, 2195
BseDI CCNNGG 9 cut(s) 125, 200, 525, 1365, 1483, 1644, 1645, 2424, 2496
BseLI CCNNNNNNNGG 5 cut(s) 43, 126, 659, 1651, 2022
BseMII CTCAG 6 cut(s) 1002, 1210, 1266, 1880, 2301, 2472
BseNI ACTGG 6 cut(s) 437, 750, 770, 804, 902, 1526
BseSI GKGCMC 2 cut(s) 1777, 2318
BseXI GCAGC 8 cut(s) 235, 1429, 1492, 1613, 1915, 1918, 2102, 2382
BseYI CCCAGC 1 cut(s) 2318
BshFI GGCC 7 cut(s) 436, 532, 847, 1458, 1482, 2177, 2316
BsiSI CCGG 2 cut(s) 43, 1132
BslFI GGGAC 4 cut(s) 242, 388, 1340, 2533
BslI CCNNNNNNNGG 5 cut(s) 43, 126, 659, 1651, 2022
BsmAI GTCTC 3 cut(s) 80, 317, 1817
BsmBI CGTCTC 1 cut(s) 317
BsmFI GGGAC 4 cut(s) 242, 388, 1340, 2533
BsmI GAATGC 1 cut(s) 255
BsnI GGCC 7 cut(s) 436, 532, 847, 1458, 1482, 2177, 2316
Bsp120I GGGCCC 1 cut(s) 2314
Bsp1286I GDGCHC 3 cut(s) 201, 1777, 2318
Bsp1720I GCTNAGC 1 cut(s) 483
Bsp19I CCATGG 1 cut(s) 2424
BspACI CCGC 3 cut(s) 480, 1652, 2087
BspANI GGCC 7 cut(s) 436, 532, 847, 1458, 1482, 2177, 2316
BspCNI CTCAG 6 cut(s) 1003, 1209, 1267, 1881, 2302, 2473
BspHI TCATGA 1 cut(s) 859
BspLI GGNNCC 8 cut(s) 499, 531, 760, 846, 1071, 1656, 2316, 2317
BspMAI CTGCAG 1 cut(s) 1711
BspMI ACCTGC 1 cut(s) 1714
BspPI GGATC 5 cut(s) 430, 450, 1389, 1667, 1806
BspTI CTTAAG 1 cut(s) 1403
BsrI ACTGG 6 cut(s) 437, 750, 770, 804, 902, 1526
BssECI CCNNGG 9 cut(s) 125, 200, 525, 1365, 1483, 1644, 1645, 2424, 2496
BssT1I CCWWGG 5 cut(s) 525, 1365, 1483, 2424, 2496
Bst2UI CCWGG 5 cut(s) 126, 202, 1646, 1659, 2195
Bst4CI ACNGT 7 cut(s) 245, 350, 692, 775, 1175, 1398, 1627
Bst6I CTCTTC 1 cut(s) 3
BstAFI CTTAAG 1 cut(s) 1403
BstAPI GCANNNNNTGC 1 cut(s) 1763
BstC8I GCNNGC 6 cut(s) 253, 452, 1101, 1419, 1440, 2324
BstDEI CTNAG 8 cut(s) 315, 483, 1011, 1196, 1275, 1889, 2310, 2481
BstDSI CCRYGG 1 cut(s) 2424
BstEII GGTNACC 1 cut(s) 2189
BstHHI GCGC 2 cut(s) 1206, 1623
BstMAI GTCTC 3 cut(s) 80, 317, 1817
BstNI CCWGG 5 cut(s) 126, 202, 1646, 1659, 2195
BstNSI RCATGY 5 cut(s) 962, 1089, 1421, 2081, 2326
BstPI GGTNACC 1 cut(s) 2189
BstSCI CCNGG 7 cut(s) 42, 124, 200, 1131, 1644, 1657, 2193
BstSFI CTRYAG 3 cut(s) 1707, 2209, 2589
BstSLI GKGCMC 2 cut(s) 1777, 2318
BstV1I GCAGC 8 cut(s) 235, 1429, 1492, 1613, 1915, 1918, 2102, 2382
BstX2I RGATCY 2 cut(s) 1672, 1798
BstXI CCANNNNNNTGG 2 cut(s) 1061, 1099
BstYI RGATCY 2 cut(s) 1672, 1798
Bsu36I CCTNAGG 1 cut(s) 1889
BsuI GTATCC 1 cut(s) 2445
BsuRI GGCC 7 cut(s) 436, 532, 847, 1458, 1482, 2177, 2316
BtgI CCRYGG 1 cut(s) 2424
BtsIMutI CAGTG 5 cut(s) 250, 507, 811, 1180, 2478
BveI ACCTGC 1 cut(s) 1714
Cac8I GCNNGC 6 cut(s) 253, 452, 1101, 1419, 1440, 2324
CaiI CAGNNNCTG 4 cut(s) 1179, 1438, 1763, 2303
CciI TCATGA 1 cut(s) 859
CfoI GCGC 2 cut(s) 1206, 1623
Cfr13I GGNCC 8 cut(s) 13, 394, 530, 845, 1457, 2176, 2314, 2315
CseI GACGC 1 cut(s) 1546
CsiI ACCWGGT 1 cut(s) 2193
Csp6I GTAC 6 cut(s) 821, 1260, 1958, 1990, 2096, 2360
CviQI GTAC 6 cut(s) 821, 1260, 1958, 1990, 2096, 2360
DdeI CTNAG 8 cut(s) 315, 483, 1011, 1196, 1275, 1889, 2310, 2481
DraI TTTAAA 1 cut(s) 2469
DraIII CACNNNGTG 1 cut(s) 2197
DriI GACNNNNNGTC 1 cut(s) 392
EaeI YGGCCR 1 cut(s) 1480
Eam1104I CTCTTC 1 cut(s) 3
Eam1105I GACNNNNNGTC 1 cut(s) 392
EarI CTCTTC 1 cut(s) 3
Eco130I CCWWGG 5 cut(s) 525, 1365, 1483, 2424, 2496
Eco24I GRGCYC 2 cut(s) 201, 2318
Eco32I GATATC 2 cut(s) 190, 1751
Eco47I GGWCC 2 cut(s) 13, 394
Eco57I CTGAAG 6 cut(s) 111, 438, 698, 1677, 1812, 2460
Eco81I CCTNAGG 1 cut(s) 1889
Eco91I GGTNACC 1 cut(s) 2189
EcoO109I RGGNCCY 6 cut(s) 13, 530, 845, 1457, 2314, 2315
EcoO65I GGTNACC 1 cut(s) 2189
EcoRI GAATTC 1 cut(s) 1270
EcoRII CCWGG 5 cut(s) 124, 200, 1644, 1657, 2193
EcoRV GATATC 2 cut(s) 190, 1751
EcoT14I CCWWGG 5 cut(s) 525, 1365, 1483, 2424, 2496
EcoT22I ATGCAT 1 cut(s) 1423
EcoT38I GRGCYC 2 cut(s) 201, 2318
ErhI CCWWGG 5 cut(s) 525, 1365, 1483, 2424, 2496
Esp3I CGTCTC 1 cut(s) 317
FaqI GGGAC 4 cut(s) 242, 388, 1340, 2533
FauNDI CATATG 1 cut(s) 904
FbaI TGATCA 2 cut(s) 631, 930
FriOI GRGCYC 2 cut(s) 201, 2318
FspBI CTAG 5 cut(s) 1461, 1469, 1715, 1854, 2412
GlaI GCGC 2 cut(s) 1205, 1622
GsaI CCCAGC 1 cut(s) 2322
GsuI CTGGAG 4 cut(s) 204, 777, 1569, 1680
HaeIII GGCC 7 cut(s) 436, 532, 847, 1458, 1482, 2177, 2316
HapII CCGG 2 cut(s) 43, 1132
HgaI GACGC 1 cut(s) 1546
HhaI GCGC 2 cut(s) 1206, 1623
Hin6I GCGC 2 cut(s) 1204, 1621
HinP1I GCGC 2 cut(s) 1204, 1621
HincII GTYRAC 3 cut(s) 117, 956, 1281
HindII GTYRAC 3 cut(s) 117, 956, 1281
HindIII AAGCTT 1 cut(s) 307
HinfI GANTC 9 cut(s) 545, 663, 800, 1157, 1250, 1760, 1784, 1895, 2485
HpaII CCGG 2 cut(s) 43, 1132
HphI GGTGA 8 cut(s) 469, 626, 882, 1230, 2009, 2183, 2209, 2428
Hpy166II GTNNAC 4 cut(s) 37, 117, 956, 1281
Hpy8I GTNNAC 4 cut(s) 37, 117, 956, 1281
HpyCH4III ACNGT 7 cut(s) 245, 350, 692, 775, 1175, 1398, 1627
HpyCH4IV ACGT 4 cut(s) 1346, 2068, 2358, 2577
HpyF3I CTNAG 8 cut(s) 315, 483, 1011, 1196, 1275, 1889, 2310, 2481
HpySE526I ACGT 4 cut(s) 1346, 2068, 2358, 2577
HspAI GCGC 2 cut(s) 1204, 1621
Ksp22I TGATCA 2 cut(s) 631, 930
LmnI GCTCC 5 cut(s) 497, 758, 1502, 1660, 1661
Lsp1109I GCAGC 8 cut(s) 235, 1429, 1492, 1613, 1915, 1918, 2102, 2382
LweI GCATC 5 cut(s) 169, 343, 1323, 2074, 2574
MabI ACCWGGT 1 cut(s) 2193
MaeI CTAG 5 cut(s) 1461, 1469, 1715, 1854, 2412
MaeII ACGT 4 cut(s) 1346, 2068, 2358, 2577
MaeIII GTNAC 9 cut(s) 475, 1081, 1175, 1398, 1491, 2049, 2189, 2305, 2476
MboII GAAGA 8 cut(s) 20, 104, 179, 691, 734, 1025, 2257, 2277
MflI RGATCY 2 cut(s) 1672, 1798
MhlI GDGCHC 3 cut(s) 201, 1777, 2318
MlsI TGGCCA 1 cut(s) 1482
MluNI TGGCCA 1 cut(s) 1482
MlyI GAGTC 1 cut(s) 809
MmeI TCCRAC 6 cut(s) 421, 1700, 2102, 2176, 2212, 2240
Mox20I TGGCCA 1 cut(s) 1482
Mph1103I ATGCAT 1 cut(s) 1423
MscI TGGCCA 1 cut(s) 1482
MseI TTAA 9 cut(s) 81, 648, 1226, 1404, 1667, 1791, 1871, 1901, 2468
MslI CAYNNNNRTG 1 cut(s) 2082
Msp20I TGGCCA 1 cut(s) 1482
MspCI CTTAAG 1 cut(s) 1403
MspI CCGG 2 cut(s) 43, 1132
MspR9I CCNGG 7 cut(s) 44, 126, 202, 1133, 1646, 1659, 2195
Mva1269I GAATGC 1 cut(s) 255
MvaI CCWGG 5 cut(s) 126, 202, 1646, 1659, 2195
NciI CCSGG 2 cut(s) 44, 1133
NcoI CCATGG 1 cut(s) 2424
NdeI CATATG 1 cut(s) 904
NlaIV GGNNCC 8 cut(s) 499, 531, 760, 846, 1071, 1656, 2316, 2317
NmuCI GTSAC 6 cut(s) 475, 1081, 1175, 2049, 2189, 2476
NsiI ATGCAT 1 cut(s) 1423
NspI RCATGY 5 cut(s) 962, 1089, 1421, 2081, 2326
PaeI GCATGC 2 cut(s) 1421, 2326
PagI TCATGA 1 cut(s) 859
PaqCI CACCTGC 1 cut(s) 1714
PasI CCCWGGG 1 cut(s) 1645
PciI ACATGT 1 cut(s) 1085
PcsI WCGNNNNNNNCGW 1 cut(s) 2574
PctI GAATGC 1 cut(s) 255
PfeI GAWTC 8 cut(s) 545, 663, 1157, 1250, 1760, 1784, 1895, 2485
PflFI GACNNNGTC 1 cut(s) 1523
PfoI TCCNGGA 1 cut(s) 1657
PleI GAGTC 1 cut(s) 808
PpsI GAGTC 1 cut(s) 808
PpuMI RGGWCCY 1 cut(s) 13
PscI ACATGT 1 cut(s) 1085
Psp5II RGGWCCY 1 cut(s) 13
Psp6I CCWGG 5 cut(s) 124, 200, 1644, 1657, 2193
PspEI GGTNACC 1 cut(s) 2189
PspFI CCCAGC 1 cut(s) 2318
PspGI CCWGG 5 cut(s) 124, 200, 1644, 1657, 2193
PspN4I GGNNCC 8 cut(s) 499, 531, 760, 846, 1071, 1656, 2316, 2317
PspOMI GGGCCC 1 cut(s) 2314
PspPI GGNCC 8 cut(s) 13, 394, 530, 845, 1457, 2176, 2314, 2315
PspPPI RGGWCCY 1 cut(s) 13
PstI CTGCAG 1 cut(s) 1711
PstNI CAGNNNCTG 4 cut(s) 1179, 1438, 1763, 2303
PsuI RGATCY 2 cut(s) 1672, 1798
PsyI GACNNNGTC 1 cut(s) 1523
RsaI GTAC 6 cut(s) 822, 1261, 1959, 1991, 2097, 2361
RsaNI GTAC 6 cut(s) 821, 1260, 1958, 1990, 2096, 2360
RseI CAYNNNNRTG 1 cut(s) 2082
SaqAI TTAA 9 cut(s) 81, 648, 1226, 1404, 1667, 1791, 1871, 1901, 2468
Sau96I GGNCC 8 cut(s) 13, 394, 530, 845, 1457, 2176, 2314, 2315
SchI GAGTC 1 cut(s) 809
ScrFI CCNGG 7 cut(s) 44, 126, 202, 1133, 1646, 1659, 2195
SduI GDGCHC 3 cut(s) 201, 1777, 2318
SexAI ACCWGGT 1 cut(s) 2193
SfaNI GCATC 5 cut(s) 169, 343, 1323, 2074, 2574
SfcI CTRYAG 3 cut(s) 1707, 2209, 2589
SinI GGWCC 2 cut(s) 13, 394
SmiMI CAYNNNNRTG 1 cut(s) 2082
SmlI CTYRAG 5 cut(s) 150, 518, 1403, 1802, 2045
SmoI CTYRAG 5 cut(s) 150, 518, 1403, 1802, 2045
SphI GCATGC 2 cut(s) 1421, 2326
SsiI CCGC 3 cut(s) 480, 1652, 2087
SspMI CTAG 5 cut(s) 1461, 1469, 1715, 1854, 2412
StyD4I CCNGG 7 cut(s) 42, 124, 200, 1131, 1644, 1657, 2193
StyI CCWWGG 5 cut(s) 525, 1365, 1483, 2424, 2496
TaaI ACNGT 7 cut(s) 245, 350, 692, 775, 1175, 1398, 1627
TaiI ACGT 4 cut(s) 1349, 2071, 2361, 2580
TaqI TCGA 5 cut(s) 489, 666, 687, 2461, 2568
TauI GCSGC 2 cut(s) 1655, 2090
TfiI GAWTC 8 cut(s) 545, 663, 1157, 1250, 1760, 1784, 1895, 2485
Tru1I TTAA 9 cut(s) 81, 648, 1226, 1404, 1667, 1791, 1871, 1901, 2468
Tru9I TTAA 9 cut(s) 81, 648, 1226, 1404, 1667, 1791, 1871, 1901, 2468
TscAI CASTG 5 cut(s) 250, 514, 811, 1180, 2485
TseFI GTSAC 6 cut(s) 475, 1081, 1175, 2049, 2189, 2476
TseI GCWGC 9 cut(s) 248, 1442, 1505, 1601, 1928, 1931, 2090, 2395, 2594
Tsp45I GTSAC 6 cut(s) 475, 1081, 1175, 2049, 2189, 2476
TspGWI ACGGA 5 cut(s) 1062, 1824, 1889, 2105, 2173
TspRI CASTG 5 cut(s) 250, 514, 811, 1180, 2485
Tth111I GACNNNGTC 1 cut(s) 1523
Vha464I CTTAAG 1 cut(s) 1403
VpaK11BI GGWCC 2 cut(s) 13, 394
XapI RAATTY 9 cut(s) 67, 215, 941, 1121, 1143, 1270, 1813, 2003, 2169
XbaI TCTAGA 1 cut(s) 1468
XceI RCATGY 5 cut(s) 962, 1089, 1421, 2081, 2326
XcmI CCANNNNNNNNNTGG 1 cut(s) 127
XspI CTAG 5 cut(s) 1461, 1469, 1715, 1854, 2412
Zsp2I ATGCAT 1 cut(s) 1423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.