Rh2DG248600

Calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0001949
Physical Location & Seq
Reverse (-)
25577397 .. 25585142
7746 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG248600.1

Sequence Viewer

Length: 2772 bp
ATGGCGGCTAGGAAGCGACAGCGTCTTGATGATCAATTAGAACTTCCGCAAATACTTTTACAAGCAAAGCATCGATGGCTACGTCCTGCTGAAATTTTCGAAGTTCTTCAAAATCATTCAAGATTTTGTCTTTCGGAGCCTGCAGATAAGCCATCGAGTGGATCATTGTATCTTTATGATCGGAACGTGCTCAGGTCTTTCAGAAAAGATGGCTATAGATGGAAAAAGACTAAAGATGGAAAGGCTGTGAAGGAAGCCCATGAGAGGCTCAAGGCTGGAGGAGTTGAGGCATTACATTGCTACTATGCCCATGGAGAAGAAAATGAGAATTTCCAAAGACGCTGTTATTGGATGATTGAAGAGCCTCTCTCGCACATAGTTCTGGTCCACTACCGAGAAGTAAAGACTTCTGAAGGTAACTTGTCATGTTCATCCAAGTTGCCTATCAATCGGAATATGCATTCAGATACTGCATATCATGCCAGTACTTCATTCCCTGGAGGAGTCAATGCAGACGAGTTACTCAATTCCCTGGGGCCTCCTTGCCATATGAATTTGGATAAACAAAATGATTCTTCTGTGCATAGGCACTCTGATAAGCAAAATGACCCTCGAATATTGAAGAATCTTGACAGTTCTGATCAATGTATGAATACAGAACTGGGAGACCTGACTGAGCTACAGATGTCCAGTTCTAGGGACCACTCGAGTACTATAGCAAGTGAGAATGGGAATGATGGGTCCGGTGCTCTTCAGCCAGTTCAAATAGCTATTCCAGGACCTTCTCTATTCCAGGACCTTCTCTTTAACATTATTGATCTTTCACCAAACTGGGCATATGAAAACTCTGAAACAGAGGTTCTTGTTGTGGGAAAGTTCTTGAAGAACCAAGAATTAGAAAGTTTTAAGTGGTCATGTATGTTTGGGGAAGTAGAAGTCACCGCTGAGGTTGTAGCAGGCGGTGTTCTTCGTTGTTATACGCCCGTACATAGGGCTGCTAGGATTCCTTTCTATGTAACACGTTCCAATAGGTTACCCTGTAGTGAAGTGAGAATATTTGAGTACCGAGTCAACCAAATTCAAGATGCGGATTTTAAGGATGACGGCTGCGAAGACGATACACTTGTTATGCGTTTTGGAAGAATACTGTCCCCAAGCTTTACGTATTCAAGTTTTAATCCACAGGATAAATATAGACAATATGATCCTATCAGTGTAGTTGAGAATTTTGATTTGACTAGTAAAATTAGTTCATTGCTAAAAAACGGCAATGAGGAAAGAGCTGAGATGATAAAGCTATTTCCAGATGAGTTTTCCTTGGATAGAGTAAAGGCGCAGTTGCTTCAACAGTTTCTTAAAGACAAGTTTCGTAAATGGCTCTTGCAGAAGCTGGCTGTTGGTGGAAATGGCTTAGGGGTACTAGACGAAGGTGGCCAGGGTGTGTTACATGTTGGAGCTGCTCTTGGCTATGACTGGGTCTTTTTACCCATGACAATGGCTGGAGTTACTGTCAATTTTCCTGATGTGAATGGATGGACGGCACTTCATTGGGCAGCTTTTCGTGGCAGAGAAAGCGCAGTTTCTTTGCTCATCGGACTTGGTGCAGCTCCTGGAGCATTAACGGATCCATTTACCAAAAGTCCCACAGGCAAAACACCAGCGGACCTAGCTTCTGAAAAGGGGTACAAAGGAATAGCTGCTTATCTTTCATCAGTACTTATACTGGATATCAATGATGCAAATTCTGCAGAGAATCCAAGAGAAAAATTAGTCCAACCAGTTCCAGAACGAATTCCAGCTTTTAGCAGCGATGGGGATTTAGATGATGGGCTTTCCATGAGGGCCCATGTAACAGGTCACCAGGTGAAGAAAAACTATGGCATGGGCTGGGCTGGAAGAACTGTTGGGATGATTTTGCGTTGGAGAGGACGAGGGAAACGAAGAAGGTTGGGCTATAAGAACCTTTGGAATGAATATGAGGGCCCTTATAATATTAGTTATGACTTTCTAAAGATTCAGGCCCATGTAACAGGTCACCAGGTGAAGAAAAACTATGGCATGGGCTGGGCTGGAAGAACTGTTGGGATGATTTTGCGTTGGAGAGGACGAGGGAAACGAAGAAGGTTGGGCTATAAGAACCTTTGGGATGATTATGAGGACCCTTATAATATTAGTTATGACTTTCTAAAGATTCAGGCCCATGTAACAGGTCACCAGGTGAAGAAAAACTATGGTATGGGCTGGGCTGTAAGAACTGTTGGGATGATTTTGCGTTGGAGAGGACGAGGGAAACGAAGAAGGTTGGGCTATAAGAACCTTTGGGATGATTATGAGGGCCCTTATAATATTAGTTATGACTTTCTAAAGATTCAGGCCCATGTAACAGGTCACCAGGTGAAGAAAAACTATGGTATGGGCTGGGCTGTAAGAACTGTTGGGATGATTTTGCGTTGGAGAGGACGAGGGAAACGAAGAAGGTTGGGCTATAAGAACCTTTGGAATGATTATGAGGGCCCTTATAATATTAGTTATGACTTTCAAAAGATTCAGGCCCATGTAACAGGTCACCAGGTGAAGAAAAACTATGGCATGGGCTGGGCTGGAAGAACTATTGGGATGATTTTGCGTTGGAGAGGACGAGGGAAACGAAGAAGGAATTGTGATGATCATTTTGCGTTGGGGAGGAAAATGAAGTGTGTTGCGTTGGTTAGACCTAGAACCACAGTGGGGGCCCTTATGATTATGAATTTCTCAAAATTCAGGCTCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 CG-1 IQ TIG

Protein Analysis

923

Amino Acids

105.37

Weight (kDa)

9.52

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CG-1 PF03859 21 - 133 2.1e-44 CG-1 domain
Ank_2 PF12796 498 - 571 5.7e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1989, 2166, 2343, 2520
AccB7I CCANNNNNTGG 1 cut(s) 158
AciI CCGC 6 cut(s) 5, 47, 942, 960, 1088, 1661
AclWI GGATC 4 cut(s) 169, 1199, 1619, 1632
AcoI YGGCCR 1 cut(s) 1432
AcsI RAATTY 9 cut(s) 93, 328, 553, 1077, 1225, 1741, 1791, 2746, 2756
AcuI CTGAAG 2 cut(s) 432, 737
AdeI CACNNNGTG 5 cut(s) 1864, 2041, 2218, 2395, 2572
AfaI GTAC 7 cut(s) 487, 712, 987, 1064, 1419, 1685, 1716
AfiI CCNNNNNNNGG 5 cut(s) 158, 264, 696, 990, 2727
AflIII ACRYGT 2 cut(s) 1019, 1447
AhlI ACTAGT 1 cut(s) 1238
Alw21I GWGCWC 2 cut(s) 192, 751
Alw26I GTCTC 1 cut(s) 660
AlwI GGATC 4 cut(s) 169, 1199, 1619, 1632
AlwNI CAGNNNCTG 3 cut(s) 470, 1390, 1610
Ama87I CYCGRG 1 cut(s) 706
ApaI GGGCCC 5 cut(s) 1846, 1985, 2339, 2516, 2734
ApeKI GCWGC 7 cut(s) 995, 1107, 1457, 1553, 1604, 1697, 1806
ApoI RAATTY 9 cut(s) 93, 328, 553, 1077, 1225, 1741, 1791, 2746, 2756
Asp700I GAANNNNTTC 2 cut(s) 105, 1791
AspLEI GCGC 2 cut(s) 1336, 1577
AsuII TTCGAA 1 cut(s) 99
AvaI CYCGRG 1 cut(s) 706
AvaII GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1663, 2158
BaeGI GKGCMC 5 cut(s) 1846, 1985, 2339, 2516, 2734
BaeI ACNNNNGTAYC 2 cut(s) 1110, 1143
BalI TGGCCA 1 cut(s) 1434
BamHI GGATCC 1 cut(s) 1624
BanII GRGCYC 5 cut(s) 1846, 1985, 2339, 2516, 2734
BbsI GAAGAC 1 cut(s) 1119
Bbv12I GWGCWC 2 cut(s) 192, 751
BbvCI CCTCAGC 1 cut(s) 945
BbvI GCAGC 7 cut(s) 982, 1094, 1444, 1565, 1616, 1684, 1818
BccI CCATC 9 cut(s) 69, 160, 203, 213, 230, 731, 1527, 1805, 1820
BceAI ACGGC 3 cut(s) 1120, 1282, 1554
BclI TGATCA 3 cut(s) 31, 640, 2665
BcoDI GTCTC 1 cut(s) 660
BcuI ACTAGT 1 cut(s) 1238
BfaI CTAG 7 cut(s) 9, 696, 999, 1239, 1421, 1667, 2715
BfmI CTRYAG 6 cut(s) 141, 214, 680, 714, 1039, 1746
BisI GCNGC 8 cut(s) 6, 996, 1108, 1458, 1554, 1605, 1698, 1807
BlsI GCNGC 8 cut(s) 7, 997, 1109, 1459, 1555, 1606, 1699, 1808
BmcAI AGTACT 3 cut(s) 487, 712, 1716
Bme18I GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1663, 2158
BmeT110I CYCGRG 1 cut(s) 706
BmrI ACTGGG 3 cut(s) 671, 841, 1483
BmsI GCATC 3 cut(s) 79, 1075, 1726
BmuI ACTGGG 3 cut(s) 671, 841, 1483
BpiI GAAGAC 1 cut(s) 1119
BplI GAGNNNNNCTC 2 cut(s) 353, 385
BpmI CTGGAG 4 cut(s) 297, 519, 1521, 1632
Bpu10I CCTNAGC 3 cut(s) 191, 945, 1411
Bpu14I TTCGAA 1 cut(s) 99
BpuEI CTTGAG 1 cut(s) 254
Bsa29I ATCGAT 1 cut(s) 73
BsaAI YACGTR 1 cut(s) 1164
BsaI GGTCTC 1 cut(s) 660
BsaJI CCNNGG 6 cut(s) 310, 496, 531, 532, 1317, 1435
BsaWI WCCGGW 1 cut(s) 743
BsaXI ACNNNNNCTCC 2 cut(s) 1494, 1524
Bsc4I CCNNNNNNNGG 5 cut(s) 158, 264, 696, 990, 2727
Bse1I ACTGG 8 cut(s) 483, 666, 690, 758, 836, 1478, 1728, 1778
Bse3DI GCAATG 3 cut(s) 295, 1253, 1276
BseCI ATCGAT 1 cut(s) 73
BseDI CCNNGG 6 cut(s) 310, 496, 531, 532, 1317, 1435
BseLI CCNNNNNNNGG 5 cut(s) 158, 264, 696, 990, 2727
BseMI GCAATG 3 cut(s) 295, 1253, 1276
BseMII CTCAG 4 cut(s) 205, 666, 936, 1275
BseNI ACTGG 8 cut(s) 483, 666, 690, 758, 836, 1478, 1728, 1778
BseRI GAGGAG 2 cut(s) 294, 516
BseSI GKGCMC 5 cut(s) 1846, 1985, 2339, 2516, 2734
BseXI GCAGC 7 cut(s) 982, 1094, 1444, 1565, 1616, 1684, 1818
BseYI CCCAGC 5 cut(s) 1887, 2064, 2241, 2418, 2595
BsgI GTGCAG 1 cut(s) 1623
BshVI ATCGAT 1 cut(s) 73
BsiHKAI GWGCWC 2 cut(s) 192, 751
BsiHKCI CYCGRG 1 cut(s) 706
BsiSI CCGG 1 cut(s) 744
BslFI GGGAC 3 cut(s) 713, 1135, 1626
BslI CCNNNNNNNGG 5 cut(s) 158, 264, 696, 990, 2727
BsmAI GTCTC 1 cut(s) 660
BsmFI GGGAC 3 cut(s) 713, 1135, 1626
BsmI GAATGC 1 cut(s) 460
Bso31I GGTCTC 1 cut(s) 660
BsoBI CYCGRG 1 cut(s) 706
Bsp119I TTCGAA 1 cut(s) 99
Bsp120I GGGCCC 5 cut(s) 1842, 1981, 2335, 2512, 2730
Bsp1286I GDGCHC 7 cut(s) 192, 751, 1846, 1985, 2339, 2516, 2734
Bsp143I GATC 8 cut(s) 31, 161, 178, 640, 817, 1204, 1624, 2665
Bsp19I CCATGG 1 cut(s) 310
BspACI CCGC 6 cut(s) 5, 47, 942, 960, 1088, 1661
BspCNI CTCAG 4 cut(s) 204, 667, 937, 1276
BspDI ATCGAT 1 cut(s) 73
BspMAI CTGCAG 2 cut(s) 145, 1750
BspPI GGATC 4 cut(s) 169, 1199, 1619, 1632
BspQI GCTCTTC 2 cut(s) 354, 756
BspT104I TTCGAA 1 cut(s) 99
BspTNI GGTCTC 1 cut(s) 660
BsrDI GCAATG 3 cut(s) 295, 1253, 1276
BsrI ACTGG 8 cut(s) 483, 666, 690, 758, 836, 1478, 1728, 1778
BssECI CCNNGG 6 cut(s) 310, 496, 531, 532, 1317, 1435
BssMI GATC 8 cut(s) 31, 161, 178, 640, 817, 1204, 1624, 2665
BssT1I CCWWGG 2 cut(s) 310, 1317
Bst4CI ACNGT 9 cut(s) 635, 1149, 1350, 1510, 1903, 2080, 2257, 2434, 2725
Bst6I CTCTTC 2 cut(s) 354, 756
BstAPI GCANNNNNTGC 2 cut(s) 479, 1745
BstBAI YACGTR 1 cut(s) 1164
BstBI TTCGAA 1 cut(s) 99
BstC8I GCNNGC 3 cut(s) 141, 958, 1392
BstDEI CTNAG 5 cut(s) 191, 675, 945, 1284, 1411
BstDSI CCRYGG 1 cut(s) 310
BstEII GGTNACC 6 cut(s) 1032, 1856, 2033, 2210, 2387, 2564
BstHHI GCGC 2 cut(s) 1336, 1577
BstKTI GATC 8 cut(s) 34, 164, 181, 643, 820, 1207, 1627, 2668
BstMAI GTCTC 1 cut(s) 660
BstMBI GATC 8 cut(s) 31, 161, 178, 640, 817, 1204, 1624, 2665
BstMWI GCNNNNNNNGC 7 cut(s) 76, 370, 479, 1572, 1613, 1667, 1745
BstNSI RCATGY 1 cut(s) 1451
BstPI GGTNACC 6 cut(s) 1032, 1856, 2033, 2210, 2387, 2564
BstSFI CTRYAG 6 cut(s) 141, 214, 680, 714, 1039, 1746
BstSLI GKGCMC 5 cut(s) 1846, 1985, 2339, 2516, 2734
BstSNI TACGTA 1 cut(s) 1164
BstV1I GCAGC 7 cut(s) 982, 1094, 1444, 1565, 1616, 1684, 1818
BstV2I GAAGAC 1 cut(s) 1119
BstX2I RGATCY 1 cut(s) 1624
BstXI CCANNNNNNTGG 1 cut(s) 1495
BstYI RGATCY 1 cut(s) 1624
Bsu15I ATCGAT 1 cut(s) 73
BsuTUI ATCGAT 1 cut(s) 73
BtgI CCRYGG 1 cut(s) 310
BtgZI GCGATG 1 cut(s) 1824
BtsIMutI CAGTG 2 cut(s) 1219, 2730
Cac8I GCNNGC 3 cut(s) 141, 958, 1392
CaiI CAGNNNCTG 3 cut(s) 470, 1390, 1610
CfoI GCGC 2 cut(s) 1336, 1577
ClaI ATCGAT 1 cut(s) 73
CseI GACGC 2 cut(s) 11, 348
CsiI ACCWGGT 5 cut(s) 1860, 2037, 2214, 2391, 2568
Csp6I GTAC 7 cut(s) 486, 711, 986, 1063, 1418, 1684, 1715
CviQI GTAC 7 cut(s) 486, 711, 986, 1063, 1418, 1684, 1715
DdeI CTNAG 5 cut(s) 191, 675, 945, 1284, 1411
DpnI GATC 8 cut(s) 33, 163, 180, 642, 819, 1206, 1626, 2667
DpnII GATC 8 cut(s) 31, 161, 178, 640, 817, 1204, 1624, 2665
DraIII CACNNNGTG 5 cut(s) 1864, 2041, 2218, 2395, 2572
EaeI YGGCCR 1 cut(s) 1432
Eam1104I CTCTTC 2 cut(s) 354, 756
EarI CTCTTC 2 cut(s) 354, 756
Eco105I TACGTA 1 cut(s) 1164
Eco130I CCWWGG 2 cut(s) 310, 1317
Eco24I GRGCYC 5 cut(s) 1846, 1985, 2339, 2516, 2734
Eco31I GGTCTC 1 cut(s) 660
Eco32I GATATC 1 cut(s) 1729
Eco47I GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1663, 2158
Eco57I CTGAAG 2 cut(s) 432, 737
Eco88I CYCGRG 1 cut(s) 706
Eco91I GGTNACC 6 cut(s) 1032, 1856, 2033, 2210, 2387, 2564
EcoO65I GGTNACC 6 cut(s) 1032, 1856, 2033, 2210, 2387, 2564
EcoRI GAATTC 1 cut(s) 1791
EcoRV GATATC 1 cut(s) 1729
EcoT14I CCWWGG 2 cut(s) 310, 1317
EcoT22I ATGCAT 1 cut(s) 462
EcoT38I GRGCYC 5 cut(s) 1846, 1985, 2339, 2516, 2734
ErhI CCWWGG 2 cut(s) 310, 1317
FaqI GGGAC 3 cut(s) 713, 1135, 1626
FauNDI CATATG 2 cut(s) 549, 838
FbaI TGATCA 3 cut(s) 31, 640, 2665
Fnu4HI GCNGC 8 cut(s) 6, 996, 1108, 1458, 1554, 1605, 1698, 1807
FriOI GRGCYC 5 cut(s) 1846, 1985, 2339, 2516, 2734
Fsp4HI GCNGC 8 cut(s) 6, 996, 1108, 1458, 1554, 1605, 1698, 1807
FspBI CTAG 7 cut(s) 9, 696, 999, 1239, 1421, 1667, 2715
GlaI GCGC 2 cut(s) 1335, 1576
GluI GCNGC 8 cut(s) 6, 996, 1108, 1458, 1554, 1605, 1698, 1807
GsaI CCCAGC 5 cut(s) 1891, 2068, 2245, 2422, 2599
GsuI CTGGAG 4 cut(s) 297, 519, 1521, 1632
HapII CCGG 1 cut(s) 744
HgaI GACGC 2 cut(s) 11, 348
HhaI GCGC 2 cut(s) 1336, 1577
Hin6I GCGC 2 cut(s) 1334, 1575
HinP1I GCGC 2 cut(s) 1334, 1575
HincII GTYRAC 1 cut(s) 1072
HindII GTYRAC 1 cut(s) 1072
HindIII AAGCTT 1 cut(s) 1156
HpaII CCGG 1 cut(s) 744
Hpy166II GTNNAC 2 cut(s) 388, 1072
Hpy188III TCNNGA 8 cut(s) 26, 120, 629, 880, 1082, 1304, 1520, 1784
Hpy8I GTNNAC 2 cut(s) 388, 1072
HpyCH4III ACNGT 9 cut(s) 635, 1149, 1350, 1510, 1903, 2080, 2257, 2434, 2725
HpyCH4IV ACGT 4 cut(s) 82, 186, 1021, 1163
HpyCH4V TGCA 9 cut(s) 143, 460, 473, 512, 583, 1384, 1604, 1739, 1748
HpyF10VI GCNNNNNNNGC 7 cut(s) 76, 370, 479, 1572, 1613, 1667, 1745
HpyF3I CTNAG 5 cut(s) 191, 675, 945, 1284, 1411
HpySE526I ACGT 4 cut(s) 82, 186, 1021, 1163
HspAI GCGC 2 cut(s) 1334, 1575
Ksp22I TGATCA 3 cut(s) 31, 640, 2665
Kzo9I GATC 8 cut(s) 31, 161, 178, 640, 817, 1204, 1624, 2665
LguI GCTCTTC 2 cut(s) 354, 756
LmnI GCTCC 4 cut(s) 136, 1454, 1612, 1613
Lsp1109I GCAGC 7 cut(s) 982, 1094, 1444, 1565, 1616, 1684, 1818
LweI GCATC 3 cut(s) 79, 1075, 1726
MabI ACCWGGT 5 cut(s) 1860, 2037, 2214, 2391, 2568
MaeI CTAG 7 cut(s) 9, 696, 999, 1239, 1421, 1667, 2715
MaeII ACGT 4 cut(s) 82, 186, 1021, 1163
MalI GATC 8 cut(s) 33, 163, 180, 642, 819, 1206, 1626, 2667
MboI GATC 8 cut(s) 31, 161, 178, 640, 817, 1204, 1624, 2665
MflI RGATCY 1 cut(s) 1624
MhlI GDGCHC 7 cut(s) 192, 751, 1846, 1985, 2339, 2516, 2734
MlsI TGGCCA 1 cut(s) 1434
MluNI TGGCCA 1 cut(s) 1434
MlyI GAGTC 2 cut(s) 513, 1077
MmeI TCCRAC 7 cut(s) 1432, 1798, 1901, 2078, 2255, 2432, 2609
Mox20I TGGCCA 1 cut(s) 1434
Mph1103I ATGCAT 1 cut(s) 462
MroXI GAANNNNTTC 2 cut(s) 105, 1791
MscI TGGCCA 1 cut(s) 1434
MseI TTAA 6 cut(s) 807, 906, 1095, 1176, 1356, 1619
MslI CAYNNNNRTG 1 cut(s) 1493
Msp20I TGGCCA 1 cut(s) 1434
MspA1I CMGCKG 2 cut(s) 944, 1661
MspI CCGG 1 cut(s) 744
Mva1269I GAATGC 1 cut(s) 460
MwoI GCNNNNNNNGC 7 cut(s) 76, 370, 479, 1572, 1613, 1667, 1745
NcoI CCATGG 1 cut(s) 310
NdeI CATATG 2 cut(s) 549, 838
NdeII GATC 8 cut(s) 31, 161, 178, 640, 817, 1204, 1624, 2665
NmuCI GTSAC 6 cut(s) 937, 1856, 2033, 2210, 2387, 2564
NsiI ATGCAT 1 cut(s) 462
NspI RCATGY 1 cut(s) 1451
NspV TTCGAA 1 cut(s) 99
PaeR7I CTCGAG 1 cut(s) 706
PasI CCCWGGG 1 cut(s) 532
PciI ACATGT 1 cut(s) 1447
PciSI GCTCTTC 2 cut(s) 354, 756
PcsI WCGNNNNNNNCGW 6 cut(s) 79, 1936, 2113, 2290, 2467, 2644
PctI GAATGC 1 cut(s) 460
PdmI GAANNNNTTC 2 cut(s) 105, 1791
PfeI GAWTC 8 cut(s) 572, 625, 1003, 1753, 2014, 2191, 2368, 2545
PflFI GACNNNGTC 2 cut(s) 21, 1475
PflMI CCANNNNNTGG 1 cut(s) 158
PfoI TCCNGGA 3 cut(s) 775, 792, 1609
PkrI GCNGC 8 cut(s) 7, 997, 1109, 1459, 1555, 1606, 1699, 1808
PleI GAGTC 2 cut(s) 512, 1076
PpsI GAGTC 2 cut(s) 512, 1076
Ppu21I YACGTR 1 cut(s) 1164
PpuMI RGGWCCY 3 cut(s) 779, 796, 2158
PscI ACATGT 1 cut(s) 1447
PsiI TTATAA 4 cut(s) 1989, 2166, 2343, 2520
Psp5II RGGWCCY 3 cut(s) 779, 796, 2158
PspEI GGTNACC 6 cut(s) 1032, 1856, 2033, 2210, 2387, 2564
PspFI CCCAGC 5 cut(s) 1887, 2064, 2241, 2418, 2595
PspOMI GGGCCC 5 cut(s) 1842, 1981, 2335, 2512, 2730
PspPPI RGGWCCY 3 cut(s) 779, 796, 2158
PspXI VCTCGAGB 1 cut(s) 706
PsrI GAACNNNNNNTAC 2 cut(s) 1234, 1266
PstI CTGCAG 2 cut(s) 145, 1750
PstNI CAGNNNCTG 3 cut(s) 470, 1390, 1610
PsuI RGATCY 1 cut(s) 1624
PsyI GACNNNGTC 2 cut(s) 21, 1475
RsaI GTAC 7 cut(s) 487, 712, 987, 1064, 1419, 1685, 1716
RsaNI GTAC 7 cut(s) 486, 711, 986, 1063, 1418, 1684, 1715
RseI CAYNNNNRTG 1 cut(s) 1493
SapI GCTCTTC 2 cut(s) 354, 756
SaqAI TTAA 6 cut(s) 807, 906, 1095, 1176, 1356, 1619
SatI GCNGC 8 cut(s) 6, 996, 1108, 1458, 1554, 1605, 1698, 1807
Sau3AI GATC 8 cut(s) 31, 161, 178, 640, 817, 1204, 1624, 2665
ScaI AGTACT 3 cut(s) 487, 712, 1716
SchI GAGTC 2 cut(s) 513, 1077
SduI GDGCHC 7 cut(s) 192, 751, 1846, 1985, 2339, 2516, 2734
SexAI ACCWGGT 5 cut(s) 1860, 2037, 2214, 2391, 2568
SfaNI GCATC 3 cut(s) 79, 1075, 1726
SfcI CTRYAG 6 cut(s) 141, 214, 680, 714, 1039, 1746
Sfr274I CTCGAG 1 cut(s) 706
SfuI TTCGAA 1 cut(s) 99
SinI GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1663, 2158
SlaI CTCGAG 1 cut(s) 706
SmiMI CAYNNNNRTG 1 cut(s) 1493
SmlI CTYRAG 2 cut(s) 269, 706
SmoI CTYRAG 2 cut(s) 269, 706
SnaBI TACGTA 1 cut(s) 1164
SpeI ACTAGT 1 cut(s) 1238
SsiI CCGC 6 cut(s) 5, 47, 942, 960, 1088, 1661
SspI AATATT 6 cut(s) 618, 1056, 1993, 2170, 2347, 2524
SspMI CTAG 7 cut(s) 9, 696, 999, 1239, 1421, 1667, 2715
StyI CCWWGG 2 cut(s) 310, 1317
TaaI ACNGT 9 cut(s) 635, 1149, 1350, 1510, 1903, 2080, 2257, 2434, 2725
TaiI ACGT 4 cut(s) 85, 189, 1024, 1166
TaqI TCGA 5 cut(s) 73, 99, 155, 613, 707
TatI WGTACW 3 cut(s) 485, 710, 1714
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 8 cut(s) 572, 625, 1003, 1753, 2014, 2191, 2368, 2545
Tru1I TTAA 6 cut(s) 807, 906, 1095, 1176, 1356, 1619
Tru9I TTAA 6 cut(s) 807, 906, 1095, 1176, 1356, 1619
TscAI CASTG 2 cut(s) 1219, 2730
TseFI GTSAC 6 cut(s) 937, 1856, 2033, 2210, 2387, 2564
TseI GCWGC 7 cut(s) 995, 1107, 1457, 1553, 1604, 1697, 1806
Tsp45I GTSAC 6 cut(s) 937, 1856, 2033, 2210, 2387, 2564
TspGWI ACGGA 1 cut(s) 1637
TspRI CASTG 2 cut(s) 1219, 2730
Tth111I GACNNNGTC 2 cut(s) 21, 1475
Van91I CCANNNNNTGG 1 cut(s) 158
VpaK11BI GGWCC 7 cut(s) 385, 700, 741, 779, 796, 1663, 2158
XapI RAATTY 9 cut(s) 93, 328, 553, 1077, 1225, 1741, 1791, 2746, 2756
XceI RCATGY 1 cut(s) 1451
XhoI CTCGAG 1 cut(s) 706
XmnI GAANNNNTTC 2 cut(s) 105, 1791
XspI CTAG 7 cut(s) 9, 696, 999, 1239, 1421, 1667, 2715
ZrmI AGTACT 3 cut(s) 487, 712, 1716
Zsp2I ATGCAT 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.