Rmu_sc0005949.1_g000007

Calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005949.1
OG0001949
Physical Location & Seq
Reverse (-)
21988 .. 33675
11688 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005949.1_g000007.1.cds

Sequence Viewer

Length: 4413 bp
atggccattgctagccttgtggctaactctctatttcttcttgctgtcttcgatctggcactaggtattccaccttggatggggatgtctgggggtgctggttgggccatggctgatctgaagccgagctccaagggagtggagctatattggtttaaggcggatcggcgagtctggatcttggatggcggtcaaccgattggcttcggtctggatcttggatcgcggtcgccttggtgtgggttccctaggtttgctgtttgggatggtaggtttgatgtttggatggctgatctgaggccgagctctaacggcgtagatctggaagggtctgaattggatcggtgcgactgggttgtgaatcgggtcatcagacttccgacggtggtttcccgatctgagtggtggagtcgtgataacgatggggagcatgaaggcaaggccagcgatggtttgtggcggactggtggtgcgactcgtgatgtcggtgttactatagggggtgcgtgccttggtttgggttcgacgtctggtggtgatgactggggcgatgtagctattgatgatagagtcgaaaatggtagcatggaagggggagatggatgtggaggtggtggtaggtgcggcggcaacgccattgtctccacttctccactcaaactgtggacggactgggcgacttgggccttggactgctttgtgggcttttttcttgggttcattggattagggagtgggaatccacctttgttgtgggttagaacggaatggggttttccagatttctgtagtgccgccgggcggcttcagcgggtgctccgttcaccttgtttcgatccctcaatgaatattctgttctggaactgtcaaggtattgtgaatagacgaactagacatgctttgaagatgttaattcaaaagcatcgcatcaatctggttttcctcagcgaaactcattgcactaaggagcaacatcaatctcttaggcgctctattgggtttcctcatattgcccacttcgaccgcgtggagagagcagggggtctcgctttactttgggatgactccatctcggttagggttcaagacgtgaagcggtattatattgatgcctatatacaagcccctaacgaggtggagtggcgtttcacggggttttatggtcatccagagactggacaacgccacttatcgtggaatatgttacgatctctagcccggaatccaggggatctttgggtagttgctggtgatttcaatgaaatattggagttgggagagaagtcaggaggcagggtgcgcagtcaaggacagatgcaggtgtttcgggatgccctctcggattgtaacctgaaggatatgggttctgctggaggattgtatacgtggtctgattcgcacaagaaggagaggttggacaggggcacctgtaccccaacctggatatcggaattagggttttcacgtgtggttaatctccaccccagtagatcggaccacgtacccctgcttttggagggaaataggacaaatttcaatcatgttaaggagaacgaaggtgttccctactccaatggagctgaagaaattgcacgccagtctgagatggagaattctgtttcttctagtttcaatccaagtagttaccaaatgcgttctcaagttacggacgcgacaagcttgagtagtgctcaggcatcagagttcgaagatgtggaatcagcattttataaccaagcaagctcccggttgcagcctatggctgagaagattaattctgagttctctgatgcgtactatcccgcattttcaaatgattttcaagaaaacttggcaaccattcctggggtggattttagctcactctctcaagcatataagagggaggatagtattgatgctggagatacctatgagcccaggaaagatcgtgaatttgcatcatgggatgatatggaaaacagtgttactggcattcaatcttttcagccatcattttcagcaacacattcagatacaatgggaagctttcctaagattgagacacttgggcatcttcatacagacagttttgataaaaggctggtgtatgggattgaaaataaaccaaaggtccaacaaagttgggagacttccgaaggatcatcaaactggcctgtggatcagagcttgcaatcacacacagaatacaatgtcaccgctaagctcgatgaaggagctaataccactgatttactcaagtccttggggcctttccttatggatccagacaagcaaaatgaccttcaatttcatctttcaaacacagatactatttcaaagagaaatgatagcattgagagaaaagctgatcacccttctactattaagcctctgttgggattcgatgatggtctgaagaagctcgacagtttcaaccgatggatgagtaaagaacttgaagatgtggatgagccacaaatgcaatccagttctggagcctactgggatactgttgaaagtgagaatgaggttgatgagtccagtgttcccctgcaagtacgcttggatagctatatgctggggccttctctttctcatgaccagctctttagcattgttgatttctcaccaaactgggcttatgaaaactctgaaatcaaggttttgatcacaggaaaatttttgaaaagtcaacatgtagaaggttgtaaatggtcatgtatgtttggggaagttgaagttcctgctgaggttatagcacatggtgttcttcgttgttatactcccgtacacaaggctggaagggttcccttctatgttacatgttccaataggctggcttgtagtgaagtaagggaatttgaataccgagttgcccaaactcaagatgttgatactaaggattattacagtgactgctcaaatgaaacactcaataagcgcttcgaaaaattattgtctttaagctctacatcttcaaattctgatacagcaagtacactagaggattctgagttgaacagtaaaattacttctatgctgaaaagtgacgatgatgaatgggacaagatgctacaacttatgtcagtcgatgaattttccttggaaagagtacaggagcagttgcttcaacagttacttaaagagaagttgcgtgcatggctcttgcagaagctggctgctggtggtaaaggccctagtgttctagacgagggtggccaaggtgtgttacattttggagctgctcttggctatgactgggtcttattgcccacaataactgctggagttagcgtcaattttcgtgatgtgaatggatggacggcacttcattgggcagctttttgtggcagagagcgcacagtcgcttctctcatcgccctgggtgcagctcctggagcattaacagatccaactaccaaatatccttcaggagaaacacctgcagacctagcttctgaacaaggacacaaaggaattgctggatatcttgcagaatctgcattgagtgctcaccttgaatctcttaatttggatatcaaggacggaaattcgacagagatttcaggaacaaaagcagtttcaagttctagcagggatggggagttaacggatgggctttccctgagggattctttaactgctgtctgtaatgcgacacaggctgctgctcgtattcatcaagtgttcagggtacaatctttccaaaggaagcagttgaaagagtatgatggtgataaatttggactttccaatgaacgggcactatcacttattgcagtcaagtcaaataaggcagggaaacgtgatgagcatgtggatgctgcagcagtacgaatacaaaataagttccgtagttggaagggtagaaaagactatttgataatccgacaaaggattgtcaaaattcaggcccatgtaagaggtcaccaggtgaggaaaaactatagaaagatagtctggtccgtaggaattgtggagaaaatcatcctgcgttggagaagaaagggaagtgggttgcgcgggttcaagccagaaccaattactgaggcccccagcatgcaagtttcatccacaaaggatgatgattatgacttgctgaaagaaggaaggaagcaaacagaggaaaggttgcaaaaggcacttgctagggtgaaatccatggttcagtatcctgaagcaagagatcaataccatcgactgttaaatgttgtcactgagattcaggaaacaaaggggtgctactcttcaatggtaccttttaatgttttatgttataggcatctgaggggattcttgtttgatgaagtctcatggatattgcaggtgctgaatagttcagaagggacatcagcttatatgcatgatgacattttcgctgacctcccagacattgtacagttgccgacattagctcagaaccagatgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 CG-1 IQ TIG

Protein Analysis

1470

Amino Acids

164.17

Weight (kDa)

5.44

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1731
AarI CACCTGC 3 cut(s) 1309, 3433, 4297
AatII GACGTC 1 cut(s) 530
Acc16I TGCGCA 1 cut(s) 1301
Acc36I ACCTGC 3 cut(s) 1309, 3433, 4297
Acc65I GGTACC 1 cut(s) 4237
AccB1I GGYRCC 2 cut(s) 1424, 4237
AccB7I CCANNNNNTGG 1 cut(s) 1175
AccI GTMKAC 1 cut(s) 1382
AccII CGCG 4 cut(s) 226, 1026, 1673, 4005
AcoI YGGCCR 2 cut(s) 3, 3199
AcuI CTGAAG 7 cut(s) 140, 791, 1373, 1602, 2417, 3396, 4179
AcvI CACGTG 1 cut(s) 1466
AcyI GRCGYC 1 cut(s) 527
AdeI CACNNNGTG 2 cut(s) 2747, 3916
AfeI AGCGCT 1 cut(s) 2924
AflIII ACRYGT 3 cut(s) 1465, 2677, 2804
AjiI CACGTC 1 cut(s) 1090
AjnI CCWGG 7 cut(s) 1225, 1439, 1843, 1919, 3363, 3376, 3912
AjuI GAANNNNNNNTTGG 2 cut(s) 1397, 1429
Alw21I GWGCWC 5 cut(s) 131, 308, 819, 1693, 3496
Alw26I GTCTC 6 cut(s) 646, 1049, 1166, 2036, 2123, 4297
AlwNI CAGNNNCTG 6 cut(s) 1175, 2898, 3157, 3377, 3482, 4312
Aor51HI AGCGCT 1 cut(s) 2924
ApeKI GCWGC 9 cut(s) 1753, 3161, 3224, 3320, 3371, 3647, 3650, 3806, 3809
AseI ATTAAT 1 cut(s) 1773
Asp700I GAANNNNTTC 1 cut(s) 1560
Asp718I GGTACC 1 cut(s) 4237
AspA2I CCTAGG 1 cut(s) 248
AspLEI GCGC 5 cut(s) 990, 1302, 2925, 3342, 4005
AsuC2I CCSGG 3 cut(s) 799, 1219, 1747
AsuII TTCGAA 2 cut(s) 1707, 2928
AsuNHI GCTAGC 1 cut(s) 11
AvaII GGWCC 3 cut(s) 1495, 2113, 3945
AvrII CCTAGG 1 cut(s) 248
AxyI CCTNAGG 1 cut(s) 3608
BaeGI GKGCMC 2 cut(s) 1427, 3748
BalI TGGCCA 2 cut(s) 5, 3201
BamHI GGATCC 1 cut(s) 2263
BanI GGYRCC 2 cut(s) 1424, 4237
BanII GRGCYC 3 cut(s) 131, 308, 1920
BarI GAAGNNNNNNTAC 2 cut(s) 2998, 3030
BauI CACGAG 1 cut(s) 477
BbrPI CACGTG 1 cut(s) 1466
BbsI GAAGAC 1 cut(s) 40
Bbv12I GWGCWC 5 cut(s) 131, 308, 819, 1693, 3496
BbvCI CCTCAGC 2 cut(s) 944, 2730
BbvI GCAGC 9 cut(s) 1765, 3148, 3211, 3332, 3383, 3634, 3637, 3793, 3821
BceAI ACGGC 2 cut(s) 328, 3321
BcgI CGANNNNNNTGC 2 cut(s) 1307, 1341
BciT130I CCWGG 7 cut(s) 1227, 1441, 1845, 1921, 3365, 3378, 3914
BciVI GTATCC 2 cut(s) 2482, 4164
BclI TGATCA 2 cut(s) 2350, 2649
BcnI CCSGG 3 cut(s) 799, 1219, 1747
BcoDI GTCTC 6 cut(s) 646, 1049, 1166, 2036, 2123, 4297
BfmI CTRYAG 5 cut(s) 495, 787, 3426, 3807, 3928
BfoI RGCGCY 2 cut(s) 991, 2926
BfuAI ACCTGC 3 cut(s) 1309, 3433, 4297
BfuI GTATCC 2 cut(s) 2482, 4164
BglII AGATCT 1 cut(s) 319
BlnI CCTAGG 1 cut(s) 248
BlpI GCTNAGC 1 cut(s) 2202
Bme18I GGWCC 3 cut(s) 1495, 2113, 3945
BmgBI CACGTC 1 cut(s) 1090
BmiI GGNNCC 9 cut(s) 245, 1426, 2250, 2265, 2479, 2565, 2790, 4035, 4239
BmrI ACTGGG 7 cut(s) 361, 553, 682, 1479, 2494, 2626, 3250
BmtI GCTAGC 1 cut(s) 15
BmuI ACTGGG 7 cut(s) 361, 553, 682, 1479, 2494, 2626, 3250
BpiI GAAGAC 1 cut(s) 40
BplI GAGNNNNNCTC 2 cut(s) 1675, 1707
BpmI CTGGAG 5 cut(s) 1392, 1923, 2496, 3288, 3399
Bpu10I CCTNAGC 3 cut(s) 944, 1692, 2730
Bpu1102I GCTNAGC 1 cut(s) 2202
Bpu14I TTCGAA 2 cut(s) 1707, 2928
BpuEI CTTGAG 5 cut(s) 1644, 1702, 1854, 2222, 2850
BpuMI CCSGG 3 cut(s) 799, 1219, 1747
BsaAI YACGTR 3 cut(s) 1386, 1466, 1501
BsaHI GRCGYC 1 cut(s) 527
BsaI GGTCTC 1 cut(s) 1049
BsaXI ACNNNNNCTCC 4 cut(s) 1281, 1311, 3261, 3291
Bse21I CCTNAGG 1 cut(s) 3608
Bse3DI GCAATG 2 cut(s) 6, 955
BseBI CCWGG 7 cut(s) 1227, 1441, 1845, 1921, 3365, 3378, 3914
BseMI GCAATG 2 cut(s) 6, 955
BseSI GKGCMC 2 cut(s) 1427, 3748
BseXI GCAGC 9 cut(s) 1765, 3148, 3211, 3332, 3383, 3634, 3637, 3793, 3821
BseYI CCCAGC 2 cut(s) 2560, 4037
BsgI GTGCAG 1 cut(s) 3390
Bsh1236I CGCG 4 cut(s) 226, 1026, 1673, 4005
Bsh1285I CGRYCG 2 cut(s) 230, 1024
BshNI GGYRCC 2 cut(s) 1424, 4237
BsiEI CGRYCG 2 cut(s) 230, 1024
BsiHKAI GWGCWC 5 cut(s) 131, 308, 819, 1693, 3496
BsiSI CCGG 3 cut(s) 798, 1219, 1747
BslFI GGGAC 2 cut(s) 3059, 4342
BsmAI GTCTC 6 cut(s) 646, 1049, 1166, 2036, 2123, 4297
BsmFI GGGAC 2 cut(s) 3059, 4342
BsmI GAATGC 1 cut(s) 1974
Bso31I GGTCTC 1 cut(s) 1049
Bsp119I TTCGAA 2 cut(s) 1707, 2928
Bsp1286I GDGCHC 8 cut(s) 131, 308, 819, 1427, 1693, 1920, 3496, 3748
Bsp1407I TGTACA 1 cut(s) 4378
Bsp1720I GCTNAGC 1 cut(s) 2202
Bsp19I CCATGG 2 cut(s) 108, 4143
BspFNI CGCG 4 cut(s) 226, 1026, 1673, 4005
BspHI TCATGA 1 cut(s) 2578
BspLI GGNNCC 9 cut(s) 245, 1426, 2250, 2265, 2479, 2565, 2790, 4035, 4239
BspMAI CTGCAG 2 cut(s) 3430, 3811
BspMI ACCTGC 3 cut(s) 1309, 3433, 4297
BspOI GCTAGC 1 cut(s) 15
BspT104I TTCGAA 2 cut(s) 1707, 2928
BspT107I GGYRCC 2 cut(s) 1424, 4237
BspTNI GGTCTC 1 cut(s) 1049
BsrDI GCAATG 2 cut(s) 6, 955
BsrGI TGTACA 1 cut(s) 4378
BssNAI GTATAC 1 cut(s) 1383
BssNI GRCGYC 1 cut(s) 527
BssSI CACGAG 1 cut(s) 477
Bst1107I GTATAC 1 cut(s) 1383
Bst2BI CACGAG 1 cut(s) 477
Bst2UI CCWGG 7 cut(s) 1227, 1441, 1845, 1921, 3365, 3378, 3914
Bst6I CTCTTC 1 cut(s) 4234
BstACI GRCGYC 1 cut(s) 527
BstAPI GCANNNNNTGC 2 cut(s) 3482, 3491
BstAUI TGTACA 1 cut(s) 4378
BstBAI YACGTR 3 cut(s) 1386, 1466, 1501
BstBI TTCGAA 2 cut(s) 1707, 2928
BstDSI CCRYGG 2 cut(s) 108, 4143
BstEII GGTNACC 1 cut(s) 3908
BstFNI CGCG 4 cut(s) 226, 1026, 1673, 4005
BstH2I RGCGCY 2 cut(s) 991, 2926
BstHHI GCGC 5 cut(s) 990, 1302, 2925, 3342, 4005
BstMAI GTCTC 6 cut(s) 646, 1049, 1166, 2036, 2123, 4297
BstMCI CGRYCG 2 cut(s) 230, 1024
BstNI CCWGG 7 cut(s) 1227, 1441, 1845, 1921, 3365, 3378, 3914
BstNSI RCATGY 5 cut(s) 899, 2681, 2808, 3800, 4045
BstPI GGTNACC 1 cut(s) 3908
BstSFI CTRYAG 5 cut(s) 495, 787, 3426, 3807, 3928
BstSLI GKGCMC 2 cut(s) 1427, 3748
BstUI CGCG 4 cut(s) 226, 1026, 1673, 4005
BstV1I GCAGC 9 cut(s) 1765, 3148, 3211, 3332, 3383, 3634, 3637, 3793, 3821
BstV2I GAAGAC 1 cut(s) 40
BstX2I RGATCY 6 cut(s) 177, 214, 319, 1231, 2263, 3391
BstXI CCANNNNNNTGG 2 cut(s) 139, 2818
BstYI RGATCY 6 cut(s) 177, 214, 319, 1231, 2263, 3391
BstZ17I GTATAC 1 cut(s) 1383
Bsu36I CCTNAGG 1 cut(s) 3608
BsuI GTATCC 2 cut(s) 2482, 4164
BtgI CCRYGG 2 cut(s) 108, 4143
BtgZI GCGATG 4 cut(s) 462, 564, 908, 3343
BtrI CACGTC 1 cut(s) 1090
BtsIMutI CAGTG 5 cut(s) 1969, 2226, 2530, 2899, 4197
BveI ACCTGC 3 cut(s) 1309, 3433, 4297
CaiI CAGNNNCTG 6 cut(s) 1175, 2898, 3157, 3377, 3482, 4312
CciI TCATGA 1 cut(s) 2578
CfoI GCGC 5 cut(s) 990, 1302, 2925, 3342, 4005
CseI GACGC 2 cut(s) 1679, 3265
CsiI ACCWGGT 1 cut(s) 3912
CspCI CAANNNNNGTGG 2 cut(s) 732, 767
DraIII CACNNNGTG 2 cut(s) 2747, 3916
EaeI YGGCCR 2 cut(s) 3, 3199
Eam1104I CTCTTC 1 cut(s) 4234
EarI CTCTTC 1 cut(s) 4234
EciI GGCGGA 2 cut(s) 176, 475
Ecl136II GAGCTC 2 cut(s) 129, 306
Eco24I GRGCYC 3 cut(s) 131, 308, 1920
Eco31I GGTCTC 1 cut(s) 1049
Eco32I GATATC 3 cut(s) 1446, 3470, 3520
Eco47I GGWCC 3 cut(s) 1495, 2113, 3945
Eco47III AGCGCT 1 cut(s) 2924
Eco53kI GAGCTC 2 cut(s) 129, 306
Eco57I CTGAAG 7 cut(s) 140, 791, 1373, 1602, 2417, 3396, 4179
Eco72I CACGTG 1 cut(s) 1466
Eco81I CCTNAGG 1 cut(s) 3608
Eco91I GGTNACC 1 cut(s) 3908
EcoICRI GAGCTC 2 cut(s) 129, 306
EcoO109I RGGNCCY 4 cut(s) 2249, 2564, 3176, 4033
EcoO65I GGTNACC 1 cut(s) 3908
EcoRI GAATTC 1 cut(s) 1612
EcoRII CCWGG 7 cut(s) 1225, 1439, 1843, 1919, 3363, 3376, 3912
EcoRV GATATC 3 cut(s) 1446, 3470, 3520
EcoT22I ATGCAT 1 cut(s) 4347
EcoT38I GRGCYC 3 cut(s) 131, 308, 1920
FaqI GGGAC 2 cut(s) 3059, 4342
FauI CCCGC 3 cut(s) 804, 1810, 3998
FbaI TGATCA 2 cut(s) 2350, 2649
FblI GTMKAC 1 cut(s) 1382
FriOI GRGCYC 3 cut(s) 131, 308, 1920
FspI TGCGCA 1 cut(s) 1301
GlaI GCGC 5 cut(s) 989, 1301, 2924, 3341, 4004
GsaI CCCAGC 2 cut(s) 2564, 4041
GsuI CTGGAG 5 cut(s) 1392, 1923, 2496, 3288, 3399
HaeII RGCGCY 2 cut(s) 991, 2926
HapII CCGG 3 cut(s) 798, 1219, 1747
HgaI GACGC 2 cut(s) 1679, 3265
HhaI GCGC 5 cut(s) 990, 1302, 2925, 3342, 4005
Hin1I GRCGYC 1 cut(s) 527
Hin6I GCGC 5 cut(s) 988, 1300, 2923, 3340, 4003
HinP1I GCGC 5 cut(s) 988, 1300, 2923, 3340, 4003
HincII GTYRAC 3 cut(s) 194, 2675, 3591
HindII GTYRAC 3 cut(s) 194, 2675, 3591
HindIII AAGCTT 2 cut(s) 1678, 2026
HpaI GTTAAC 1 cut(s) 3591
HpaII CCGG 3 cut(s) 798, 1219, 1747
Hpy166II GTNNAC 8 cut(s) 194, 666, 824, 1383, 2675, 2773, 2981, 3591
Hpy8I GTNNAC 8 cut(s) 194, 666, 824, 1383, 2675, 2773, 2981, 3591
Hpy99I CGWCG 2 cut(s) 385, 529
HpyCH4IV ACGT 6 cut(s) 527, 1089, 1385, 1465, 1500, 3787
HpySE526I ACGT 6 cut(s) 527, 1089, 1385, 1465, 1500, 3787
Hsp92I GRCGYC 1 cut(s) 527
HspAI GCGC 5 cut(s) 988, 1300, 2923, 3340, 4003
KpnI GGTACC 1 cut(s) 4241
Ksp22I TGATCA 2 cut(s) 2350, 2649
KspAI GTTAAC 1 cut(s) 3591
Lsp1109I GCAGC 9 cut(s) 1765, 3148, 3211, 3332, 3383, 3634, 3637, 3793, 3821
MabI ACCWGGT 1 cut(s) 3912
MaeII ACGT 6 cut(s) 527, 1089, 1385, 1465, 1500, 3787
MflI RGATCY 6 cut(s) 177, 214, 319, 1231, 2263, 3391
MhlI GDGCHC 8 cut(s) 131, 308, 819, 1427, 1693, 1920, 3496, 3748
MlsI TGGCCA 2 cut(s) 5, 3201
MluNI TGGCCA 2 cut(s) 5, 3201
MlyI GAGTC 6 cut(s) 180, 418, 469, 579, 1058, 2528
MmeI TCCRAC 7 cut(s) 404, 1395, 2140, 3419, 3821, 3895, 3959
Mox20I TGGCCA 2 cut(s) 5, 3201
Mph1103I ATGCAT 1 cut(s) 4347
MroXI GAANNNNTTC 1 cut(s) 1560
MscI TGGCCA 2 cut(s) 5, 3201
MslI CAYNNNNRTG 1 cut(s) 3801
Msp20I TGGCCA 2 cut(s) 5, 3201
MspA1I CMGCKG 1 cut(s) 811
MspI CCGG 3 cut(s) 798, 1219, 1747
Mva1269I GAATGC 1 cut(s) 1974
MvaI CCWGG 7 cut(s) 1227, 1441, 1845, 1921, 3365, 3378, 3914
MvnI CGCG 4 cut(s) 226, 1026, 1673, 4005
NciI CCSGG 3 cut(s) 799, 1219, 1747
NcoI CCATGG 2 cut(s) 108, 4143
NheI GCTAGC 1 cut(s) 11
NlaIV GGNNCC 9 cut(s) 245, 1426, 2250, 2265, 2479, 2565, 2790, 4035, 4239
NmeAIII GCCGAG 2 cut(s) 150, 327
NmuCI GTSAC 5 cut(s) 2194, 2894, 3029, 3908, 4195
NsbI TGCGCA 1 cut(s) 1301
NsiI ATGCAT 1 cut(s) 4347
NspI RCATGY 5 cut(s) 899, 2681, 2808, 3800, 4045
NspV TTCGAA 2 cut(s) 1707, 2928
PaeI GCATGC 1 cut(s) 4045
PagI TCATGA 1 cut(s) 2578
PaqCI CACCTGC 3 cut(s) 1309, 3433, 4297
PasI CCCWGGG 1 cut(s) 3364
PciI ACATGT 2 cut(s) 2677, 2804
PcsI WCGNNNNNNNCGW 1 cut(s) 674
PctI GAATGC 1 cut(s) 1974
PdmI GAANNNNTTC 1 cut(s) 1560
PflFI GACNNNGTC 1 cut(s) 3242
PflMI CCANNNNNTGG 1 cut(s) 1175
PfoI TCCNGGA 1 cut(s) 3376
PleI GAGTC 6 cut(s) 179, 417, 469, 578, 1058, 2527
PmaCI CACGTG 1 cut(s) 1466
PmlI CACGTG 1 cut(s) 1466
PpsI GAGTC 6 cut(s) 179, 417, 469, 578, 1058, 2527
Ppu21I YACGTR 3 cut(s) 1386, 1466, 1501
PscI ACATGT 2 cut(s) 2677, 2804
PshBI ATTAAT 1 cut(s) 1773
PsiI TTATAA 1 cut(s) 1731
Psp124BI GAGCTC 2 cut(s) 131, 308
Psp6I CCWGG 7 cut(s) 1225, 1439, 1843, 1919, 3363, 3376, 3912
PspCI CACGTG 1 cut(s) 1466
PspEI GGTNACC 1 cut(s) 3908
PspFI CCCAGC 2 cut(s) 2560, 4037
PspGI CCWGG 7 cut(s) 1225, 1439, 1843, 1919, 3363, 3376, 3912
PspN4I GGNNCC 9 cut(s) 245, 1426, 2250, 2265, 2479, 2565, 2790, 4035, 4239
PstI CTGCAG 2 cut(s) 3430, 3811
PstNI CAGNNNCTG 6 cut(s) 1175, 2898, 3157, 3377, 3482, 4312
PsuI RGATCY 6 cut(s) 177, 214, 319, 1231, 2263, 3391
PsyI GACNNNGTC 1 cut(s) 3242
RseI CAYNNNNRTG 1 cut(s) 3801
SacI GAGCTC 2 cut(s) 131, 308
SchI GAGTC 6 cut(s) 180, 418, 469, 579, 1058, 2528
SduI GDGCHC 8 cut(s) 131, 308, 819, 1427, 1693, 1920, 3496, 3748
SexAI ACCWGGT 1 cut(s) 3912
SfcI CTRYAG 5 cut(s) 495, 787, 3426, 3807, 3928
SfuI TTCGAA 2 cut(s) 1707, 2928
SinI GGWCC 3 cut(s) 1495, 2113, 3945
SmiMI CAYNNNNRTG 1 cut(s) 3801
SmlI CTYRAG 5 cut(s) 1659, 1681, 1869, 2237, 2865
SmoI CTYRAG 5 cut(s) 1659, 1681, 1869, 2237, 2865
SphI GCATGC 1 cut(s) 4045
SspI AATATT 2 cut(s) 850, 1266
SstI GAGCTC 2 cut(s) 131, 308
TaiI ACGT 6 cut(s) 530, 1092, 1388, 1468, 1503, 3790
TaqII GACCGA 1 cut(s) 197
TatI WGTACW 3 cut(s) 2978, 3094, 4378
TauI GCSGC 4 cut(s) 627, 630, 797, 805
TscAI CASTG 5 cut(s) 1969, 2233, 2530, 2899, 4204
TseFI GTSAC 5 cut(s) 2194, 2894, 3029, 3908, 4195
TseI GCWGC 9 cut(s) 1753, 3161, 3224, 3320, 3371, 3647, 3650, 3806, 3809
Tsp45I GTSAC 5 cut(s) 2194, 2894, 3029, 3908, 4195
TspGWI ACGGA 8 cut(s) 683, 779, 809, 1682, 3543, 3608, 3824, 3937
TspRI CASTG 5 cut(s) 1969, 2233, 2530, 2899, 4204
Tth111I GACNNNGTC 1 cut(s) 3242
Van91I CCANNNNNTGG 1 cut(s) 1175
VpaK11BI GGWCC 3 cut(s) 1495, 2113, 3945
VspI ATTAAT 1 cut(s) 1773
XbaI TCTAGA 1 cut(s) 3187
XceI RCATGY 5 cut(s) 899, 2681, 2808, 3800, 4045
XcmI CCANNNNNNNNNTGG 4 cut(s) 660, 750, 1233, 1846
XmaJI CCTAGG 1 cut(s) 248
XmiI GTMKAC 1 cut(s) 1382
XmnI GAANNNNTTC 1 cut(s) 1560
ZraI GACGTC 1 cut(s) 528
Zsp2I ATGCAT 1 cut(s) 4347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.