Rroxscaffold_2G00129820

Calmodulin-binding transcription activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0001949
Physical Location & Seq
Reverse (-)
65893206 .. 65904843
11638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00129820.1

Sequence Viewer

Length: 2499 bp
ATGAGTAAAGATATTGATGACCCCCAAATGCATGCCACAGAACTAGCCTACTGGGATACTGTTGGAAGTGAGAATGAGGTTGATGAGTCCAGTGTTCCCCTGCAAGTATGCTTGGATAGCAATGGGCTGGGGCCTTCTCTTGCTAATGACCTGCTCTTTAGCATTGTTGATTTCTCACCAAACTGGGCATATGAAAACTCTGAAATCGAGGTTTTCATCAGTGGAACAGTTTTGAAGAGTCGACAGGCAGAAGGTTGTAAGTGGTCATGTATGTTTGGGAAAGTAGAAGTTCCCGCTGAGGTTCTAGCAGATGGCGTTCTTCGTTGTTATACGCCCATACATAGGGCTGCAAAGGTTCCTTTCTATATAACATGTTCCAGTAGGTTACCATGTAGTGAAGTGAGAGTATTTGAGTACAGAGTCAACCAAATTCAAGATGCTGATTCTAAGCGTGATGGCTGCAAAGATGAAACACATGTCATGCGTTTTAGAAGTTTACTGTCCGTAAGCTCTATGCATCCAAGTTTTAATCCACAGATAAAAAAAAGACATAAACAATATGATCCCATCTGTGAAGCCCAGAATTCAGATTTGAGTGGTAAAATTAATGCGTTGCTAAAGAACGGCAATGAAGAAAGAGCTCAGATGCTACAGCTTTTTCCAGATGAGCTTTCCTTGGAAAGACTAAAGGAACAGTTGCTTCAACAGTTTCTTAAAGACAAGTTCCATCAATGGATCTTGCAGAATCTGGCTGTTGGTGGAAATGGCTCTATTGTACGAGACGAGGGTGGCCAAGGTGTGCTACATATTGGAGCTTCGCTCGGCTATGATTGGGTCTTATTACCCATGATAACGGCTGGGGTTAGTGTCAATTTTCGTGATGTGAATGGATGGGCGGCACTTCATTGGGCAGCCTTTTGTGGCAGAGAGCGCACAGTTGCTTCTCTCATCAATTTTGGTGCAGCTCCTGGAGCATTAACAGATCCATGTACTAAATATCCCACTGGCAAAACACCTGCCGACATAGCTTCTGAACAGGGGCACAAAGGAATCGCTGGTTATCTAGCAGAATCTGCTTTGAATGCTCACCTTTCATTTCTTAAATTGGATATCAATGATTCTGCAGCGATTTCAGAATCAAAATCAGAGCAACAAGTTCCAGAACAAATTTCAGCTTCTAGCTGGGGTGGGAATTTAACGGATGGGCTTTCCCTGAGGGCTTGTTTAGTTGCAGTCAATAATGCTACCCAAGCTGCTGCCCGTATTGTACAATCTTTCCCAAGGAAGCAGTTGAAAGAGTACAATGGTGATCAATTTGCGATTTCAAATGAATGGGATCCATCACTTACTGCAGTCAAGTCACATGAGGCAGGAAAACGTGATGAGCGTGTGGATGCTGCGGCAATACAAAATAAGGACGAAGTAAGAGGTCACAAGGTGACGAAAAATTATAGAAAGATACTTTGGGCTGTAGGAATTTTAGAGAAGATCATTTTGCGTTGGAGAAGGAAAAGATGTGGGTTGCGCGGGTTCAAGCCAGAACCACTTAGTGGGGGCCCCAGCATGCAAGGTTCATCCTCAAGGGATAGTGATTATGATTTCGTTATTGAGGGACGGAAGCAAACAGAGGAAAGGTTGATGAAGGCGGTTGCGAGGGTGAAGTTCATGGTTATGTCTCCTGAAGCAAGGGATCAGTACCTTCGACTGTTAAATGTTACAACTGAGATTCAGAAAACCAAGGTACTTCGACGAACGGATGACTGTGAACTCCTCAGCTTCATATTTGCAAAGAGTGCTCCGGATGGTCAAAGCTACACCCTAGTCAGGACAGACACCTATTTCCTTACTCGACATATGGTTTGGTCACTTCAACCCAATGGATGGCTGTATGGTGATGTAATTGATGTCTTTGCCGAGTACCTATGGTTGGGAGGTTCAAAGCATGATATTTATTTTCCAACTCATTTCTCGAAACAAGTGGACATAGACATTGGTGGCAAAAATAAAACGGATCTGGATCCCACTGAGTTTGCAAGGTACTTGAGGAAGGTTATTGGGCTAGAGAAATTTGACGAGCACATATCCCAGTGCAAAAAGATGTTTGTCCCCCTTCACGATGATAATCACTGGTACCTACTGGTGGTCCATATTGATAGTCAAGTTGCTGAAATATGGGATAGCTTGAATCCTACGGCGAGACGATGCAATCACTGCAAACATGTGCTAGAAGCTCTCGACATTCTCTATGATAAAGTCGAGTTCCGGTTGCAGAAGAAAAACAAATTTTCTTATTACAGCTTGTCTGAGCCAGTGCAATGTCCTCGACAGGTGGGTGGTAGTGACTGTGGGATTTATCTTGTCAGACACATGCAAAGCTATGGTAAAGAATGGTGGCATGAGTTTGACTCACAGGAGCAGAGGATGGATCTCGCTGTTGAGCTCGTAAGAAACAGATTTAATTTAGCCTGGAAAGATGTCTCGGCAGATGTGAATGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0032774 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070417 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0098542 GO:0099402 GO:0140110 GO:1900367 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000068 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 CG-1 IQ TIG

Protein Analysis

832

Amino Acids

94.17

Weight (kDa)

6.25

Isoelectric Point (pI)

43.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 268 - 358 2.6e-07 Ankyrin repeats (3 copies)
Peptidase_C48 PF02902 691 - 801 1.2e-11 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1024
Acc36I ACCTGC 2 cut(s) 159, 1024
Acc65I GGTACC 1 cut(s) 2130
AccB1I GGYRCC 1 cut(s) 2130
AccB7I CCANNNNNTGG 2 cut(s) 1550, 1881
AccI GTMKAC 1 cut(s) 241
AccII CGCG 1 cut(s) 1527
AccIII TCCGGA 1 cut(s) 1798
AciI CCGC 5 cut(s) 294, 896, 1400, 1527, 1646
AcoI YGGCCR 1 cut(s) 790
AcsI RAATTY 7 cut(s) 429, 583, 1167, 1192, 1476, 2066, 2282
AcuI CTGAAG 1 cut(s) 1701
AdeI CACNNNGTG 2 cut(s) 1438, 1550
AfiI CCNNNNNNNGG 6 cut(s) 342, 1550, 1824, 1881, 1927, 2140
AflIII ACRYGT 3 cut(s) 371, 475, 2218
AjnI CCWGG 2 cut(s) 967, 2465
AjuI GAANNNNNNNTTGG 2 cut(s) 1447, 1479
Alw21I GWGCWC 4 cut(s) 643, 1798, 2079, 2442
Alw26I GTCTC 4 cut(s) 774, 1680, 2191, 2482
AlwNI CAGNNNCTG 3 cut(s) 748, 968, 1073
Aor13HI TCCGGA 1 cut(s) 1798
AoxI GGCC 3 cut(s) 131, 790, 1555
ApaI GGGCCC 1 cut(s) 1559
ApeKI GCWGC 8 cut(s) 347, 459, 911, 962, 1124, 1253, 1256, 1397
ApoI RAATTY 7 cut(s) 429, 583, 1167, 1192, 1476, 2066, 2282
ArsI GACNNNNNNTTYG 2 cut(s) 1842, 1874
AseI ATTAAT 1 cut(s) 606
Asp718I GGTACC 1 cut(s) 2130
AspLEI GCGC 2 cut(s) 933, 1527
AspS9I GGNCC 4 cut(s) 131, 1555, 1556, 2143
AsuHPI GGTGA 6 cut(s) 168, 1079, 1319, 1450, 1669, 1904
AvaII GGWCC 1 cut(s) 2143
AxyI CCTNAGG 1 cut(s) 1214
BaeGI GKGCMC 2 cut(s) 1044, 1559
BalI TGGCCA 1 cut(s) 792
BamHI GGATCC 2 cut(s) 1336, 2017
BanI GGYRCC 1 cut(s) 2130
BanII GRGCYC 3 cut(s) 643, 1559, 2442
Bbv12I GWGCWC 4 cut(s) 643, 1798, 2079, 2442
BbvCI CCTCAGC 2 cut(s) 297, 1772
BbvI GCAGC 8 cut(s) 334, 446, 923, 974, 1136, 1240, 1243, 1384
BceAI ACGGC 3 cut(s) 640, 870, 2208
BcgI CGANNNNNNTGC 2 cut(s) 2303, 2337
BciT130I CCWGG 2 cut(s) 969, 2467
BciVI GTATCC 1 cut(s) 49
BclI TGATCA 1 cut(s) 1309
BcoDI GTCTC 4 cut(s) 774, 1680, 2191, 2482
BfaI CTAG 7 cut(s) 44, 305, 1064, 1179, 1820, 2060, 2225
BfmI CTRYAG 4 cut(s) 650, 1122, 1350, 1470
BfuAI ACCTGC 2 cut(s) 159, 1024
BfuI GTATCC 1 cut(s) 49
Bme1390I CCNGG 2 cut(s) 969, 2467
Bme18I GGWCC 1 cut(s) 2143
BmgT120I GGNCC 4 cut(s) 131, 1555, 1556, 2143
BmiI GGNNCC 8 cut(s) 132, 357, 1338, 1556, 1557, 1558, 2019, 2132
BmrFI CCNGG 2 cut(s) 969, 2467
BmrI ACTGGG 3 cut(s) 61, 193, 2080
BmsI GCATC 5 cut(s) 427, 526, 636, 1384, 2192
BmuI ACTGGG 3 cut(s) 61, 193, 2080
BplI GAGNNNNNCTC 4 cut(s) 804, 836, 2390, 2422
BpmI CTGGAG 1 cut(s) 990
Bpu10I CCTNAGC 2 cut(s) 297, 1772
BpuEI CTTGAG 2 cut(s) 1564, 2062
BsaBI GATNNNNATC 2 cut(s) 2016, 2121
BsaJI CCNNGG 4 cut(s) 675, 793, 1280, 1737
BsaWI WCCGGW 2 cut(s) 1798, 2262
Bsc4I CCNNNNNNNGG 6 cut(s) 342, 1550, 1824, 1881, 1927, 2140
Bse1I ACTGG 9 cut(s) 56, 90, 188, 378, 1009, 2086, 2132, 2142, 2309
Bse21I CCTNAGG 1 cut(s) 1214
Bse3DI GCAATG 3 cut(s) 127, 634, 2321
Bse8I GATNNNNATC 2 cut(s) 2016, 2121
BseAI TCCGGA 1 cut(s) 1798
BseBI CCWGG 2 cut(s) 969, 2467
BseDI CCNNGG 4 cut(s) 675, 793, 1280, 1737
BseGI GGATG 9 cut(s) 517, 896, 1207, 1399, 1574, 1762, 1807, 1886, 2427
BseJI GATNNNNATC 2 cut(s) 2016, 2121
BseLI CCNNNNNNNGG 6 cut(s) 342, 1550, 1824, 1881, 1927, 2140
BseMI GCAATG 3 cut(s) 127, 634, 2321
BseMII CTCAG 7 cut(s) 288, 656, 1205, 1713, 1786, 2016, 2295
BseNI ACTGG 9 cut(s) 56, 90, 188, 378, 1009, 2086, 2132, 2142, 2309
BseRI GAGGAG 1 cut(s) 1760
BseSI GKGCMC 2 cut(s) 1044, 1559
BseXI GCAGC 8 cut(s) 334, 446, 923, 974, 1136, 1240, 1243, 1384
BseYI CCCAGC 4 cut(s) 127, 857, 1182, 1559
BsgI GTGCAG 1 cut(s) 981
Bsh1236I CGCG 1 cut(s) 1527
BshFI GGCC 3 cut(s) 133, 792, 1557
BshNI GGYRCC 1 cut(s) 2130
BsiHKAI GWGCWC 4 cut(s) 643, 1798, 2079, 2442
BsiSI CCGG 2 cut(s) 1799, 2263
BslFI GGGAC 2 cut(s) 1626, 2090
BslI CCNNNNNNNGG 6 cut(s) 342, 1550, 1824, 1881, 1927, 2140
BsmAI GTCTC 4 cut(s) 774, 1680, 2191, 2482
BsmBI CGTCTC 2 cut(s) 774, 2191
BsmFI GGGAC 2 cut(s) 1626, 2090
BsmI GAATGC 1 cut(s) 1087
BsnI GGCC 3 cut(s) 133, 792, 1557
Bsp120I GGGCCC 1 cut(s) 1555
Bsp1286I GDGCHC 6 cut(s) 643, 1044, 1559, 1798, 2079, 2442
Bsp13I TCCGGA 1 cut(s) 1798
Bsp1407I TGTACA 1 cut(s) 1267
BspACI CCGC 5 cut(s) 294, 896, 1400, 1527, 1646
BspANI GGCC 3 cut(s) 133, 792, 1557
BspCNI CTCAG 7 cut(s) 289, 655, 1206, 1714, 1785, 2017, 2296
BspEI TCCGGA 1 cut(s) 1798
BspFNI CGCG 1 cut(s) 1527
BspLI GGNNCC 8 cut(s) 132, 357, 1338, 1556, 1557, 1558, 2019, 2132
BspMAI CTGCAG 2 cut(s) 1126, 1354
BspMI ACCTGC 2 cut(s) 159, 1024
BspT107I GGYRCC 1 cut(s) 2130
BsrDI GCAATG 3 cut(s) 127, 634, 2321
BsrGI TGTACA 1 cut(s) 1267
BsrI ACTGG 9 cut(s) 56, 90, 188, 378, 1009, 2086, 2132, 2142, 2309
BssECI CCNNGG 4 cut(s) 675, 793, 1280, 1737
BssT1I CCWWGG 4 cut(s) 675, 793, 1280, 1737
Bst2UI CCWGG 2 cut(s) 969, 2467
Bst4CI ACNGT 9 cut(s) 61, 229, 501, 696, 708, 937, 1707, 1763, 2345
Bst6I CTCTTC 1 cut(s) 230
BstAPI GCANNNNNTGC 3 cut(s) 1073, 1793, 2211
BstAUI TGTACA 1 cut(s) 1267
BstC8I GCNNGC 2 cut(s) 33, 1565
BstDEI CTNAG 9 cut(s) 297, 447, 642, 1214, 1547, 1722, 1772, 2025, 2304
BstEII GGTNACC 1 cut(s) 384
BstF5I GGATG 9 cut(s) 517, 896, 1207, 1399, 1574, 1762, 1807, 1886, 2427
BstFNI CGCG 1 cut(s) 1527
BstHHI GCGC 2 cut(s) 933, 1527
BstMAI GTCTC 4 cut(s) 774, 1680, 2191, 2482
BstMWI GCNNNNNNNGC 9 cut(s) 117, 930, 971, 1025, 1073, 1082, 1250, 1793, 2211
BstNI CCWGG 2 cut(s) 969, 2467
BstNSI RCATGY 6 cut(s) 35, 375, 479, 1567, 2222, 2371
BstPI GGTNACC 1 cut(s) 384
BstSCI CCNGG 2 cut(s) 967, 2465
BstSFI CTRYAG 4 cut(s) 650, 1122, 1350, 1470
BstSLI GKGCMC 2 cut(s) 1044, 1559
BstUI CGCG 1 cut(s) 1527
BstV1I GCAGC 8 cut(s) 334, 446, 923, 974, 1136, 1240, 1243, 1384
BstX2I RGATCY 6 cut(s) 735, 982, 1336, 2011, 2017, 2425
BstYI RGATCY 6 cut(s) 735, 982, 1336, 2011, 2017, 2425
Bsu36I CCTNAGG 1 cut(s) 1214
BsuI GTATCC 1 cut(s) 49
BsuRI GGCC 3 cut(s) 133, 792, 1557
BtsCI GGATG 9 cut(s) 517, 896, 1207, 1399, 1574, 1762, 1807, 1886, 2427
BtsI GCAGTG 1 cut(s) 2209
BtsIMutI CAGTG 8 cut(s) 97, 226, 1002, 2022, 2093, 2125, 2209, 2316
BveI ACCTGC 2 cut(s) 159, 1024
Cac8I GCNNGC 2 cut(s) 33, 1565
CaiI CAGNNNCTG 3 cut(s) 748, 968, 1073
CfoI GCGC 2 cut(s) 933, 1527
Cfr13I GGNCC 4 cut(s) 131, 1555, 1556, 2143
CspCI CAANNNNNGTGG 2 cut(s) 2011, 2046
DdeI CTNAG 9 cut(s) 297, 447, 642, 1214, 1547, 1722, 1772, 2025, 2304
DraIII CACNNNGTG 2 cut(s) 1438, 1550
EaeI YGGCCR 1 cut(s) 790
Eam1104I CTCTTC 1 cut(s) 230
EarI CTCTTC 1 cut(s) 230
Ecl136II GAGCTC 2 cut(s) 641, 2440
Eco130I CCWWGG 4 cut(s) 675, 793, 1280, 1737
Eco24I GRGCYC 3 cut(s) 643, 1559, 2442
Eco32I GATATC 1 cut(s) 1111
Eco47I GGWCC 1 cut(s) 2143
Eco53kI GAGCTC 2 cut(s) 641, 2440
Eco57I CTGAAG 1 cut(s) 1701
Eco81I CCTNAGG 1 cut(s) 1214
Eco91I GGTNACC 1 cut(s) 384
EcoICRI GAGCTC 2 cut(s) 641, 2440
EcoO109I RGGNCCY 3 cut(s) 131, 1555, 1556
EcoO65I GGTNACC 1 cut(s) 384
EcoRI GAATTC 1 cut(s) 583
EcoRII CCWGG 2 cut(s) 967, 2465
EcoRV GATATC 1 cut(s) 1111
EcoT14I CCWWGG 4 cut(s) 675, 793, 1280, 1737
EcoT22I ATGCAT 2 cut(s) 33, 519
EcoT38I GRGCYC 3 cut(s) 643, 1559, 2442
ErhI CCWWGG 4 cut(s) 675, 793, 1280, 1737
Esp3I CGTCTC 2 cut(s) 774, 2191
FaqI GGGAC 2 cut(s) 1626, 2090
FauI CCCGC 2 cut(s) 301, 1520
FauNDI CATATG 2 cut(s) 190, 1854
FbaI TGATCA 1 cut(s) 1309
FblI GTMKAC 1 cut(s) 241
FokI GGATG 9 cut(s) 504, 903, 1214, 1406, 1561, 1769, 1814, 1893, 2434
FriOI GRGCYC 3 cut(s) 643, 1559, 2442
FspBI CTAG 7 cut(s) 44, 305, 1064, 1179, 1820, 2060, 2225
GlaI GCGC 2 cut(s) 932, 1526
GsaI CCCAGC 4 cut(s) 131, 861, 1186, 1563
GsuI CTGGAG 1 cut(s) 990
HaeIII GGCC 3 cut(s) 133, 792, 1557
HapII CCGG 2 cut(s) 1799, 2263
HhaI GCGC 2 cut(s) 933, 1527
Hin6I GCGC 2 cut(s) 931, 1525
HinP1I GCGC 2 cut(s) 931, 1525
HincII GTYRAC 2 cut(s) 242, 424
HindII GTYRAC 2 cut(s) 242, 424
HpaII CCGG 2 cut(s) 1799, 2263
HphI GGTGA 6 cut(s) 168, 1079, 1319, 1450, 1669, 1904
Hpy166II GTNNAC 5 cut(s) 242, 424, 497, 1766, 1981
Hpy188I TCNGA 9 cut(s) 202, 589, 645, 1033, 1135, 1147, 1731, 2305, 2363
Hpy8I GTNNAC 5 cut(s) 242, 424, 497, 1766, 1981
Hpy99I CGWCG 1 cut(s) 1752
HpyAV CCTTC 7 cut(s) 144, 245, 1500, 1636, 1709, 2041, 2120
HpyCH4III ACNGT 9 cut(s) 61, 229, 501, 696, 708, 937, 1707, 1763, 2345
HpyCH4IV ACGT 1 cut(s) 1378
HpyF10VI GCNNNNNNNGC 9 cut(s) 117, 930, 971, 1025, 1073, 1082, 1250, 1793, 2211
HpyF3I CTNAG 9 cut(s) 297, 447, 642, 1214, 1547, 1722, 1772, 2025, 2304
HpySE526I ACGT 1 cut(s) 1378
HspAI GCGC 2 cut(s) 931, 1525
Kpn2I TCCGGA 1 cut(s) 1798
KpnI GGTACC 1 cut(s) 2134
Ksp22I TGATCA 1 cut(s) 1309
LmnI GCTCC 5 cut(s) 812, 970, 971, 1801, 2413
Lsp1109I GCAGC 8 cut(s) 334, 446, 923, 974, 1136, 1240, 1243, 1384
LweI GCATC 5 cut(s) 427, 526, 636, 1384, 2192
MaeI CTAG 7 cut(s) 44, 305, 1064, 1179, 1820, 2060, 2225
MaeII ACGT 1 cut(s) 1378
MaeIII GTNAC 7 cut(s) 384, 1359, 1430, 1438, 1714, 1863, 2339
MboII GAAGA 5 cut(s) 247, 311, 644, 1498, 2284
MflI RGATCY 6 cut(s) 735, 982, 1336, 2011, 2017, 2425
MhlI GDGCHC 6 cut(s) 643, 1044, 1559, 1798, 2079, 2442
MlsI TGGCCA 1 cut(s) 792
MluNI TGGCCA 1 cut(s) 792
MlyI GAGTC 4 cut(s) 95, 247, 429, 2399
MmeI TCCRAC 3 cut(s) 43, 1481, 1982
Mox20I TGGCCA 1 cut(s) 792
Mph1103I ATGCAT 2 cut(s) 33, 519
MroI TCCGGA 1 cut(s) 1798
MscI TGGCCA 1 cut(s) 792
MseI TTAA 8 cut(s) 528, 606, 714, 977, 1101, 1196, 1709, 2457
MslI CAYNNNNRTG 1 cut(s) 1670
Msp20I TGGCCA 1 cut(s) 792
MspA1I CMGCKG 1 cut(s) 296
MspI CCGG 2 cut(s) 1799, 2263
MspR9I CCNGG 2 cut(s) 969, 2467
Mva1269I GAATGC 1 cut(s) 1087
MvaI CCWGG 2 cut(s) 969, 2467
MvnI CGCG 1 cut(s) 1527
MwoI GCNNNNNNNGC 9 cut(s) 117, 930, 971, 1025, 1073, 1082, 1250, 1793, 2211
NdeI CATATG 2 cut(s) 190, 1854
NlaIV GGNNCC 8 cut(s) 132, 357, 1338, 1556, 1557, 1558, 2019, 2132
NmeAIII GCCGAG 3 cut(s) 801, 1939, 2459
NmuCI GTSAC 5 cut(s) 1359, 1430, 1438, 1863, 2339
NsiI ATGCAT 2 cut(s) 33, 519
NspI RCATGY 6 cut(s) 35, 375, 479, 1567, 2222, 2371
PaeI GCATGC 2 cut(s) 35, 1567
PaqCI CACCTGC 1 cut(s) 1024
PciI ACATGT 3 cut(s) 371, 475, 2218
PcsI WCGNNNNNNNCGW 1 cut(s) 1384
PctI GAATGC 1 cut(s) 1087
PfeI GAWTC 8 cut(s) 443, 745, 1050, 1070, 1118, 1136, 1726, 2185
PflMI CCANNNNNTGG 2 cut(s) 1550, 1881
PfoI TCCNGGA 1 cut(s) 967
PleI GAGTC 4 cut(s) 94, 246, 428, 2399
PpsI GAGTC 4 cut(s) 94, 246, 428, 2399
PscI ACATGT 3 cut(s) 371, 475, 2218
PshBI ATTAAT 1 cut(s) 606
Psp124BI GAGCTC 2 cut(s) 643, 2442
Psp6I CCWGG 2 cut(s) 967, 2465
PspEI GGTNACC 1 cut(s) 384
PspFI CCCAGC 4 cut(s) 127, 857, 1182, 1559
PspGI CCWGG 2 cut(s) 967, 2465
PspN4I GGNNCC 8 cut(s) 132, 357, 1338, 1556, 1557, 1558, 2019, 2132
PspOMI GGGCCC 1 cut(s) 1555
PspPI GGNCC 4 cut(s) 131, 1555, 1556, 2143
PstI CTGCAG 2 cut(s) 1126, 1354
PstNI CAGNNNCTG 3 cut(s) 748, 968, 1073
PsuI RGATCY 6 cut(s) 735, 982, 1336, 2011, 2017, 2425
RseI CAYNNNNRTG 1 cut(s) 1670
SacI GAGCTC 2 cut(s) 643, 2442
SalI GTCGAC 1 cut(s) 240
SaqAI TTAA 8 cut(s) 528, 606, 714, 977, 1101, 1196, 1709, 2457
Sau96I GGNCC 4 cut(s) 131, 1555, 1556, 2143
SchI GAGTC 4 cut(s) 95, 247, 429, 2399
ScrFI CCNGG 2 cut(s) 969, 2467
SduI GDGCHC 6 cut(s) 643, 1044, 1559, 1798, 2079, 2442
SfaNI GCATC 5 cut(s) 427, 526, 636, 1384, 2192
SfcI CTRYAG 4 cut(s) 650, 1122, 1350, 1470
SinI GGWCC 1 cut(s) 2143
SmiMI CAYNNNNRTG 1 cut(s) 1670
SmlI CTYRAG 2 cut(s) 1579, 2041
SmoI CTYRAG 2 cut(s) 1579, 2041
SphI GCATGC 2 cut(s) 35, 1567
SsiI CCGC 5 cut(s) 294, 896, 1400, 1527, 1646
SspMI CTAG 7 cut(s) 44, 305, 1064, 1179, 1820, 2060, 2225
SstI GAGCTC 2 cut(s) 643, 2442
StyD4I CCNGG 2 cut(s) 967, 2465
StyI CCWWGG 4 cut(s) 675, 793, 1280, 1737
TaaI ACNGT 9 cut(s) 61, 229, 501, 696, 708, 937, 1707, 1763, 2345
TaiI ACGT 1 cut(s) 1381
TaqI TCGA 9 cut(s) 207, 241, 1702, 1747, 1849, 1970, 2235, 2256, 2323
TatI WGTACW 4 cut(s) 414, 989, 1267, 1299
TauI GCSGC 2 cut(s) 899, 1403
TfiI GAWTC 8 cut(s) 443, 745, 1050, 1070, 1118, 1136, 1726, 2185
Tru1I TTAA 8 cut(s) 528, 606, 714, 977, 1101, 1196, 1709, 2457
Tru9I TTAA 8 cut(s) 528, 606, 714, 977, 1101, 1196, 1709, 2457
TscAI CASTG 8 cut(s) 97, 226, 1009, 2029, 2093, 2132, 2216, 2316
TseFI GTSAC 5 cut(s) 1359, 1430, 1438, 1863, 2339
TseI GCWGC 8 cut(s) 347, 459, 911, 962, 1124, 1253, 1256, 1397
Tsp45I GTSAC 5 cut(s) 1359, 1430, 1438, 1863, 2339
TspGWI ACGGA 5 cut(s) 493, 1214, 1630, 1769, 2024
TspRI CASTG 8 cut(s) 97, 226, 1009, 2029, 2093, 2132, 2216, 2316
Van91I CCANNNNNTGG 2 cut(s) 1550, 1881
VpaK11BI GGWCC 1 cut(s) 2143
VspI ATTAAT 1 cut(s) 606
XapI RAATTY 7 cut(s) 429, 583, 1167, 1192, 1476, 2066, 2282
XceI RCATGY 6 cut(s) 35, 375, 479, 1567, 2222, 2371
XmiI GTMKAC 1 cut(s) 241
XspI CTAG 7 cut(s) 44, 305, 1064, 1179, 1820, 2060, 2225
Zsp2I ATGCAT 2 cut(s) 33, 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.