Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0001729

Physical Location & Seq

Genomic Coordinates Forward (+)

6270363 .. 6277232

Gene Structure 6870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g09360.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGAAGAAACTCCAGGAAACGGCGAGAAAATGCCCAAACAGAAGCGGGAACGTAGCAGCCTACTGGCCTTCGGCGGCGCCGCTGCTCTGCTCACCCTCGCCGCTACCCTTGGAATCACCGCCTTCAATGCTCACACTAAGAACAGAAAGAAGAAATATCTTCAGGGCTCTAAGGTTCGGGCTAATCTATCGGCGTCCGAAATTTTGAAATTGGCGGACCGAATCATTTCAAAGTCGAAAGAGGTCCACGATGCGGTTGCTTCGGTTCCACTCGACAAGGTTACATATATGAACGTTATTTCGCCTCTAGCAGAGTTAGAGGCGCAACAATTTCCACTTGTCCAGTCTTGTGTGTTTCCTAAGATGGCTTCCACTTCCGATGATGTTCACAAAGCAAGTGCTGAAGCAGAGCGGAGAATTGATGCCCATGTTCTGACTTGCAGCAAGCGTGAAGATGTATACCGCGTCGTCAAAGCTTTTGCTGCAAGAGCGGAGTGGGTGAATGCTGAAGCAAAGTACTATACTCAGGCCTTGATGAGAGACTTTGAACGCAATGGGTTGAATCTTACTTTAACTAAGACAGAGGAAATGCAACGCTTGAGAGTCCAAATCGATGAGCTAAGTTTGCGGTATATTCAAAATTTAAATGATGACAGTACTTTCCTTCTCTTCACTGAGGCTGAGTTGGCTGGGTTACCGCCAGAGTTTCTTAAGAGCTTAGGCAAAGTTGCAGATGGTAAATTCAAGGTGACCCTGAAAAGTCATCATGTGGCAGCAGTACTTGAACTTTGCGAGGTTGGAACAACAAGGAGTATGGTAGCAGTGGCATATGGAAAGAGGGGTGGAGAAGTCAGTCTTTCTATCTTAGAAGATTTGGTCCAACTGCGCCATAAATTTGCTCGGTTACTTGGCTATTCAAGTTATGCAGATTATGCAGTTAATCTTAGAATGGCAAAGGCACCCTCAAAGGTTTTTGAGTTCTTAGAGGACATCTCCAATAGTTTGACTGGCGCAGCTACCATGGAGCTTTCCATGTTGAAAGATTTGAAGAGAAAAGAGGAAGGAGACCATCCATTTGGAATTGAGGATCTGCTATACTATGTCAAGAAGGCTGAAGCACAGCAGTTTAATATGGATCTTGGAGCTCTTAAGCAATACTTCCCAGTAAATTTGGTTATATCTGGGGTGTTCAAGATAGTGCAAGACCTTTTTGGTTTAAGATTTGTGGAAATTAGAGATGCTGAGGTTTGGCATTCTGATGTCACTGTATACTCAGTCTTTGACTTAAGTTCTGGTGAACTTTTGGGTCATTTCTACCTCGATATGTTCATAAGGGAAAGAAAATATAACCATACCTGTGTGGTTGCTCTTCAAAATGGTGCATTATCAACAAATGGATCAAGTCAGATTCCAGTGGCATTACTGATATCTCAATTCCAAAAGGATGCTAGTGGTCAACCTGCACTACTAAGATTCTCCGAAGTTGTGAATCTTTTCCATGAGTTTGGCCACGTGGTGCAACATATATGCAATCGCGCATCATTTGCCAGATTTTCTGGGCTGGGTTTTGATCCAGATTTTGTAGAGGTTCCTGCTCTGGTGCTGGAGAACTGGTGTTACGAAAGCTTCACTTTGAAGTTGATATCTGGTTTCCATCAGGATATAACAAAGCCTATCAAAGATGAAATGTGTAAATCCATTAAAAGATGGAGATATTCCTTTTCTGCGCTTAAAATGAAGCAAGAAATTCTCTATTGTCTTTTTGATCAGATTATACATTCTACTGAAAACATCGACATGGCTGAGTTATTCAAGCATCTTCATCCAAGGATCATGTTAGGTTTGCCAATGTTGGAAGATGTCAATCCTGCGTCATGTTTTCCATCTAGTGCCATTGGTCACGAAGCTGCTTGTTACAGCCGTATTTGGAGTGAGGTTTTTGCGGCTGATATATTTGCTTCAAAGTTCCATGAGAGTTATCTGAACCAGTATGTTGGCATGCAGTTCAGAAACAAGATATTGGCCCCAGGAGGAGCAAGGGAACCCATTGAAATGTTAACTGGCTTTCTTGGGAGAGAACCATCAATTCAAGCTTTTATCAACAGCAGATCACAATGCCAATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005758 GO:0005829 GO:0005886 GO:0006109 GO:0006111 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009889 GO:0009987 GO:0010675 GO:0010830 GO:0010906 GO:0016020 GO:0016202 GO:0016787 GO:0019222 GO:0019538 GO:0031323 GO:0031967 GO:0031970 GO:0031974 GO:0031975 GO:0033218 GO:0034641 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043255 GO:0043603 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0048634 GO:0048641 GO:0050789 GO:0050793 GO:0050794 GO:0051147 GO:0051153 GO:0051239 GO:0062012 GO:0065007 GO:0070011 GO:0070012 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:0140096 GO:1901564 GO:1901861 GO:1902809 GO:2000026 GO:2001014

KEGG Pathways

Metabolic & Signaling

ko04614 ko05143 map04614 map05143

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

709

Amino Acids

79.66

Weight (kDa)

6.86

Isoelectric Point (pI)

38.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67690
fragaria_vesca	FvH4_4g24570 FvH4_4g24570 FvH4_4g24570 FvH4_4g24570
malus_domestica	MD02G1151800.v1.1 MD13G1110200.v1.1 MD16G1110100.v1.1 MD16G1110200.v1.1
prunus_persica	Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1
pyrus_communis	pycom13g09590 pycom16g09360
rosa_chinensis	RchiOBHm_Chr4g0431491 RchiOBHm_Chr4g0431531 RchiOBHm_Chr4g0444651
rosa_laevigata	RLG00000006910 RLG00000018869 RLG00000036429
rosa_multiflora	Rmu_sc0000543.1_g000041 Rmu_sc0001207.1_g000024
rosa_roxburghii	Rroxscaffold_5G00372940 Rroxscaffold_5G00372960 Rroxscaffold_5G00372990 Rroxscaffold_5G00373020
rosa_rugosa	Rorug04G0250600 Rorug04G0250700
rosa_samantha	Rh2AG013000 Rh2AG278200 Rh4AG306800 Rh4AG307200 Rh4AG307400 Rh4BG314800 Rh4BG315100 Rh4CG330200 Rh4DG310000 Rh4DG310100 Rh4DG421900 Rh5AG518200 Rh5DG435400 Rh6CG219500
rosa_wichuraiana	Rw4G026630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1468
AccB1I	GGYRCC	2 cut(s)	77, 958
AccBSI	CCGCTC	2 cut(s)	412, 491
AccI	GTMKAC	2 cut(s)	459, 1269
AccII	CGCG	2 cut(s)	465, 1536
AclI	AACGTT	1 cut(s)	294
AclWI	GGATC	5 cut(s)	1095, 1143, 1405, 1565, 1838
AcoI	YGGCCR	1 cut(s)	1507
AcsI	RAATTY	6 cut(s)	201, 640, 740, 893, 1168, 1746
AcuI	CTGAAG	4 cut(s)	146, 423, 528, 1134
AcvI	CACGTG	1 cut(s)	1513
AcyI	GRCGYC	2 cut(s)	78, 194
AdeI	CACNNNGTG	1 cut(s)	1516
AfaI	GTAC	3 cut(s)	518, 658, 780
AfiI	CCNNNNNNNGG	2 cut(s)	20, 253
AflII	CTTAAG	3 cut(s)	710, 1148, 1285
AjnI	CCWGG	2 cut(s)	13, 2026
AluBI	AGCT	9 cut(s)	476, 619, 717, 1016, 1027, 1145, 1626, 1907, 2093
AluI	AGCT	9 cut(s)	476, 619, 717, 1016, 1027, 1145, 1626, 1907, 2093
Alw21I	GWGCWC	1 cut(s)	1147
Alw26I	GTCTC	2 cut(s)	534, 1059
AlwI	GGATC	5 cut(s)	1095, 1143, 1405, 1565, 1838
AoxI	GGCC	4 cut(s)	66, 528, 1507, 2022
ApeKI	GCWGC	7 cut(s)	57, 83, 441, 482, 773, 1013, 1907
ApoI	RAATTY	6 cut(s)	201, 640, 740, 893, 1168, 1746
ArsI	GACNNNNNNTTYG	2 cut(s)	1058, 1090
Asp700I	GAANNNNTTC	2 cut(s)	226, 1493
AspLEI	GCGC	6 cut(s)	80, 325, 888, 1013, 1538, 1729
AspS9I	GGNCC	4 cut(s)	217, 244, 877, 2023
AsuHPI	GGTGA	5 cut(s)	85, 109, 511, 760, 1307
AvaII	GGWCC	3 cut(s)	217, 244, 877
BalI	TGGCCA	1 cut(s)	1509
BanI	GGYRCC	2 cut(s)	77, 958
BanII	GRGCYC	2 cut(s)	170, 1147
BbrPI	CACGTG	1 cut(s)	1513
Bbv12I	GWGCWC	1 cut(s)	1147
BbvCI	CCTCAGC	1 cut(s)	1242
BbvI	GCAGC	7 cut(s)	69, 70, 453, 469, 785, 1025, 1894
BccI	CCATC	7 cut(s)	358, 728, 1077, 1662, 1701, 1891, 2089
BceAI	ACGGC	2 cut(s)	37, 1905
BcgI	CGANNNNNNTGC	2 cut(s)	239, 273
BciT130I	CCWGG	2 cut(s)	15, 2028
BclI	TGATCA	1 cut(s)	1765
BcoDI	GTCTC	2 cut(s)	534, 1059
BfaI	CTAG	3 cut(s)	308, 1449, 1887
BfoI	RGCGCY	1 cut(s)	81
BfrI	CTTAAG	3 cut(s)	710, 1148, 1285
BfuAI	ACCTGC	1 cut(s)	1468
BmcAI	AGTACT	3 cut(s)	518, 658, 780
Bme1390I	CCNGG	2 cut(s)	15, 2028
Bme18I	GGWCC	3 cut(s)	217, 244, 877
BmgT120I	GGNCC	4 cut(s)	217, 244, 877, 2023
BmiI	GGNNCC	6 cut(s)	79, 267, 960, 1590, 2025, 2043
BmrFI	CCNGG	2 cut(s)	15, 2028
BmrI	ACTGGG	1 cut(s)	1157
BmsI	GCATC	6 cut(s)	241, 412, 1228, 1435, 1547, 1825
BmuI	ACTGGG	1 cut(s)	1157
BplI	GAGNNNNNCTC	2 cut(s)	977, 1009
BpmI	CTGGAG	1 cut(s)	1625
Bpu10I	CCTNAGC	2 cut(s)	718, 1242
BpuEI	CTTGAG	1 cut(s)	619
Bsa29I	ATCGAT	1 cut(s)	612
BsaAI	YACGTR	1 cut(s)	1513
BsaBI	GATNNNNATC	1 cut(s)	1863
BsaHI	GRCGYC	2 cut(s)	78, 194
BsaI	GGTCTC	1 cut(s)	1059
BsaJI	CCNNGG	4 cut(s)	109, 1020, 1826, 2026
BsaXI	ACNNNNNCTCC	2 cut(s)	1598, 1628
Bsc4I	CCNNNNNNNGG	2 cut(s)	20, 253
Bse1I	ACTGG	8 cut(s)	69, 343, 1012, 1163, 1412, 1616, 1987, 2065
Bse3DI	GCAATG	1 cut(s)	559
Bse8I	GATNNNNATC	1 cut(s)	1863
BseBI	CCWGG	2 cut(s)	15, 2028
BseCI	ATCGAT	1 cut(s)	612
BseDI	CCNNGG	4 cut(s)	109, 1020, 1826, 2026
BseGI	GGATG	3 cut(s)	1069, 1450, 1822
BseJI	GATNNNNATC	1 cut(s)	1863
BseLI	CCNNNNNNNGG	2 cut(s)	20, 253
BseMI	GCAATG	1 cut(s)	559
BseMII	CTCAG	6 cut(s)	539, 666, 672, 1233, 1287, 1794
BseNI	ACTGG	8 cut(s)	69, 343, 1012, 1163, 1412, 1616, 1987, 2065
BseRI	GAGGAG	1 cut(s)	2046
BseXI	GCAGC	7 cut(s)	69, 70, 453, 469, 785, 1025, 1894
BseYI	CCCAGC	2 cut(s)	689, 1561
BsgI	GTGCAG	1 cut(s)	1446
Bsh1236I	CGCG	2 cut(s)	465, 1536
BshFI	GGCC	4 cut(s)	68, 530, 1509, 2024
BshNI	GGYRCC	2 cut(s)	77, 958
BshVI	ATCGAT	1 cut(s)	612
BsiHKAI	GWGCWC	1 cut(s)	1147
BslI	CCNNNNNNNGG	2 cut(s)	20, 253
BsmAI	GTCTC	2 cut(s)	534, 1059
BsmI	GAATGC	2 cut(s)	508, 1252
BsnI	GGCC	4 cut(s)	68, 530, 1509, 2024
Bso31I	GGTCTC	1 cut(s)	1059
Bsp1286I	GDGCHC	2 cut(s)	170, 1147
Bsp143I	GATC	7 cut(s)	1087, 1135, 1397, 1570, 1765, 1830, 2108
Bsp19I	CCATGG	1 cut(s)	1020
BspANI	GGCC	4 cut(s)	68, 530, 1509, 2024
BspCNI	CTCAG	6 cut(s)	538, 667, 673, 1234, 1286, 1795
BspDI	ATCGAT	1 cut(s)	612
BspFNI	CGCG	2 cut(s)	465, 1536
BspLI	GGNNCC	6 cut(s)	79, 267, 960, 1590, 2025, 2043
BspMI	ACCTGC	1 cut(s)	1468
BspPI	GGATC	5 cut(s)	1095, 1143, 1405, 1565, 1838
BspQI	GCTCTTC	1 cut(s)	1374
BspT107I	GGYRCC	2 cut(s)	77, 958
BspTI	CTTAAG	3 cut(s)	710, 1148, 1285
BspTNI	GGTCTC	1 cut(s)	1059
BsrBI	CCGCTC	2 cut(s)	412, 491
BsrDI	GCAATG	1 cut(s)	559
BsrI	ACTGG	8 cut(s)	69, 343, 1012, 1163, 1412, 1616, 1987, 2065
BssECI	CCNNGG	4 cut(s)	109, 1020, 1826, 2026
BssMI	GATC	7 cut(s)	1087, 1135, 1397, 1570, 1765, 1830, 2108
BssNAI	GTATAC	2 cut(s)	460, 1270
BssNI	GRCGYC	2 cut(s)	78, 194
BssT1I	CCWWGG	3 cut(s)	109, 1020, 1826
Bst1107I	GTATAC	2 cut(s)	460, 1270
Bst2UI	CCWGG	2 cut(s)	15, 2028
Bst4CI	ACNGT	2 cut(s)	656, 1267
Bst6I	CTCTTC	3 cut(s)	674, 1043, 1374
BstACI	GRCGYC	2 cut(s)	78, 194
BstAFI	CTTAAG	3 cut(s)	710, 1148, 1285
BstAPI	GCANNNNNTGC	2 cut(s)	932, 1544
BstBAI	YACGTR	1 cut(s)	1513
BstC8I	GCNNGC	2 cut(s)	446, 2000
BstDSI	CCRYGG	1 cut(s)	1020
BstEII	GGTNACC	2 cut(s)	693, 748
BstF5I	GGATG	3 cut(s)	1069, 1450, 1822
BstFNI	CGCG	2 cut(s)	465, 1536
BstH2I	RGCGCY	1 cut(s)	81
BstHHI	GCGC	6 cut(s)	80, 325, 888, 1013, 1538, 1729
BstKTI	GATC	7 cut(s)	1090, 1138, 1400, 1573, 1768, 1833, 2111
BstMAI	GTCTC	2 cut(s)	534, 1059
BstMBI	GATC	7 cut(s)	1087, 1135, 1397, 1570, 1765, 1830, 2108
BstMWI	GCNNNNNNNGC	7 cut(s)	128, 482, 488, 625, 686, 932, 1544
BstNI	CCWGG	2 cut(s)	15, 2028
BstNSI	RCATGY	1 cut(s)	2002
BstPI	GGTNACC	2 cut(s)	693, 748
BstSCI	CCNGG	2 cut(s)	13, 2026
BstUI	CGCG	2 cut(s)	465, 1536
BstV1I	GCAGC	7 cut(s)	69, 70, 453, 469, 785, 1025, 1894
BstX2I	RGATCY	2 cut(s)	1087, 1135
BstXI	CCANNNNNNTGG	3 cut(s)	1076, 1505, 1994
BstYI	RGATCY	2 cut(s)	1087, 1135
BstZ17I	GTATAC	2 cut(s)	460, 1270
Bsu15I	ATCGAT	1 cut(s)	612
BsuRI	GGCC	4 cut(s)	68, 530, 1509, 2024
BsuTUI	ATCGAT	1 cut(s)	612
BtgI	CCRYGG	1 cut(s)	1020
BtsCI	GGATG	3 cut(s)	1069, 1450, 1822
BtsI	GCAGTG	1 cut(s)	828
BtsIMutI	CAGTG	4 cut(s)	672, 828, 1263, 1419
BveI	ACCTGC	1 cut(s)	1468
Cac8I	GCNNGC	2 cut(s)	446, 2000
CfoI	GCGC	6 cut(s)	80, 325, 888, 1013, 1538, 1729
Cfr13I	GGNCC	4 cut(s)	217, 244, 877, 2023
ClaI	ATCGAT	1 cut(s)	612
CpoI	CGGWCCG	1 cut(s)	217
CseI	GACGC	3 cut(s)	183, 454, 1860
Csp6I	GTAC	3 cut(s)	517, 657, 779
CspI	CGGWCCG	1 cut(s)	217
CviQI	GTAC	3 cut(s)	517, 657, 779
DinI	GGCGCC	1 cut(s)	79
DpnI	GATC	7 cut(s)	1089, 1137, 1399, 1572, 1767, 1832, 2110
DpnII	GATC	7 cut(s)	1087, 1135, 1397, 1570, 1765, 1830, 2108
DraI	TTTAAA	1 cut(s)	645
DraIII	CACNNNGTG	1 cut(s)	1516
EaeI	YGGCCR	1 cut(s)	1507
Eam1104I	CTCTTC	3 cut(s)	674, 1043, 1374
EarI	CTCTTC	3 cut(s)	674, 1043, 1374
EciI	GGCGGA	1 cut(s)	230
Ecl136II	GAGCTC	1 cut(s)	1145
Eco130I	CCWWGG	3 cut(s)	109, 1020, 1826
Eco147I	AGGCCT	1 cut(s)	530
Eco24I	GRGCYC	2 cut(s)	170, 1147
Eco31I	GGTCTC	1 cut(s)	1059
Eco32I	GATATC	2 cut(s)	1428, 1644
Eco47I	GGWCC	3 cut(s)	217, 244, 877
Eco53kI	GAGCTC	1 cut(s)	1145
Eco57I	CTGAAG	4 cut(s)	146, 423, 528, 1134
Eco72I	CACGTG	1 cut(s)	1513
Eco91I	GGTNACC	2 cut(s)	693, 748
EcoICRI	GAGCTC	1 cut(s)	1145
EcoO65I	GGTNACC	2 cut(s)	693, 748
EcoRII	CCWGG	2 cut(s)	13, 2026
EcoRV	GATATC	2 cut(s)	1428, 1644
EcoT14I	CCWWGG	3 cut(s)	109, 1020, 1826
EcoT38I	GRGCYC	2 cut(s)	170, 1147
EgeI	GGCGCC	1 cut(s)	79
EheI	GGCGCC	1 cut(s)	79
ErhI	CCWWGG	3 cut(s)	109, 1020, 1826
FalI	AAGNNNNNCTT	6 cut(s)	840, 872, 1142, 1174, 1615, 1647
FauI	CCCGC	1 cut(s)	39
FauNDI	CATATG	1 cut(s)	829
FbaI	TGATCA	1 cut(s)	1765
FblI	GTMKAC	2 cut(s)	459, 1269
FokI	GGATG	3 cut(s)	1056, 1457, 1809
FriOI	GRGCYC	2 cut(s)	170, 1147
FspBI	CTAG	3 cut(s)	308, 1449, 1887
GlaI	GCGC	6 cut(s)	79, 324, 887, 1012, 1537, 1728
GsaI	CCCAGC	2 cut(s)	693, 1565
GsuI	CTGGAG	1 cut(s)	1625
HaeII	RGCGCY	1 cut(s)	81
HaeIII	GGCC	4 cut(s)	68, 530, 1509, 2024
HgaI	GACGC	3 cut(s)	183, 454, 1860
HhaI	GCGC	6 cut(s)	80, 325, 888, 1013, 1538, 1729
Hin1I	GRCGYC	2 cut(s)	78, 194
Hin6I	GCGC	6 cut(s)	78, 323, 886, 1011, 1536, 1727
HinP1I	GCGC	6 cut(s)	78, 323, 886, 1011, 1536, 1727
HincII	GTYRAC	2 cut(s)	1457, 2058
HindII	GTYRAC	2 cut(s)	1457, 2058
HindIII	AAGCTT	3 cut(s)	474, 1624, 2091
HinfI	GANTC	7 cut(s)	114, 222, 562, 603, 1408, 1473, 1489
HpaI	GTTAAC	1 cut(s)	2058
HphI	GGTGA	5 cut(s)	85, 109, 511, 760, 1307
Hpy166II	GTNNAC	7 cut(s)	247, 388, 460, 1270, 1298, 1457, 2058
Hpy188I	TCNGA	9 cut(s)	199, 379, 435, 1258, 1407, 1480, 1770, 1983, 2009
Hpy188III	TCNNGA	5 cut(s)	1105, 1192, 1574, 1658, 1901
Hpy8I	GTNNAC	7 cut(s)	247, 388, 460, 1270, 1298, 1457, 2058
Hpy99I	CGWCG	1 cut(s)	470
HpyAV	CCTTC	5 cut(s)	79, 133, 674, 1055, 1102
HpyCH4III	ACNGT	2 cut(s)	656, 1267
HpyCH4IV	ACGT	3 cut(s)	52, 294, 1512
HpyF10VI	GCNNNNNNNGC	7 cut(s)	128, 482, 488, 625, 686, 932, 1544
HpySE526I	ACGT	3 cut(s)	52, 294, 1512
Hsp92I	GRCGYC	2 cut(s)	78, 194
HspAI	GCGC	6 cut(s)	78, 323, 886, 1011, 1536, 1727
KasI	GGCGCC	1 cut(s)	77
Ksp22I	TGATCA	1 cut(s)	1765
KspAI	GTTAAC	1 cut(s)	2058
Kzo9I	GATC	7 cut(s)	1087, 1135, 1397, 1570, 1765, 1830, 2108
LguI	GCTCTTC	1 cut(s)	1374
LmnI	GCTCC	3 cut(s)	1024, 1142, 2033
Lsp1109I	GCAGC	7 cut(s)	69, 70, 453, 469, 785, 1025, 1894
LweI	GCATC	6 cut(s)	241, 412, 1228, 1435, 1547, 1825
MaeI	CTAG	3 cut(s)	308, 1449, 1887
MaeII	ACGT	3 cut(s)	52, 294, 1512
MaeIII	GTNAC	8 cut(s)	280, 693, 748, 903, 1261, 1616, 1898, 1913
MalI	GATC	7 cut(s)	1089, 1137, 1399, 1572, 1767, 1832, 2110
MbiI	CCGCTC	2 cut(s)	412, 491
MboI	GATC	7 cut(s)	1087, 1135, 1397, 1570, 1765, 1830, 2108
MfeI	CAATTG	1 cut(s)	2120
MflI	RGATCY	2 cut(s)	1087, 1135
MhlI	GDGCHC	2 cut(s)	170, 1147
MlsI	TGGCCA	1 cut(s)	1509
MluNI	TGGCCA	1 cut(s)	1509
Mly113I	GGCGCC	1 cut(s)	78
MlyI	GAGTC	1 cut(s)	612
MmeI	TCCRAC	3 cut(s)	778, 904, 1833
Mox20I	TGGCCA	1 cut(s)	1509
MroXI	GAANNNNTTC	2 cut(s)	226, 1493
MscI	TGGCCA	1 cut(s)	1509
MslI	CAYNNNNRTG	4 cut(s)	1257, 1356, 1796, 2051
Msp20I	TGGCCA	1 cut(s)	1509
MspA1I	CMGCKG	1 cut(s)	83
MspCI	CTTAAG	3 cut(s)	710, 1148, 1285
MspR9I	CCNGG	2 cut(s)	15, 2028
MunI	CAATTG	1 cut(s)	2120
Mva1269I	GAATGC	2 cut(s)	508, 1252
MvaI	CCWGG	2 cut(s)	15, 2028
MvnI	CGCG	2 cut(s)	465, 1536
MwoI	GCNNNNNNNGC	7 cut(s)	128, 482, 488, 625, 686, 932, 1544
NarI	GGCGCC	1 cut(s)	78
NcoI	CCATGG	1 cut(s)	1020
NdeI	CATATG	1 cut(s)	829
NdeII	GATC	7 cut(s)	1087, 1135, 1397, 1570, 1765, 1830, 2108
NlaIV	GGNNCC	6 cut(s)	79, 267, 960, 1590, 2025, 2043
NmuCI	GTSAC	3 cut(s)	748, 1261, 1898
NspI	RCATGY	1 cut(s)	2002
PaeI	GCATGC	1 cut(s)	2002
PceI	AGGCCT	1 cut(s)	530
PciSI	GCTCTTC	1 cut(s)	1374
PctI	GAATGC	2 cut(s)	508, 1252
PdmI	GAANNNNTTC	2 cut(s)	226, 1493
PfeI	GAWTC	6 cut(s)	114, 222, 562, 1408, 1473, 1489
PfoI	TCCNGGA	1 cut(s)	13
PleI	GAGTC	1 cut(s)	611
PluTI	GGCGCC	1 cut(s)	81
PmaCI	CACGTG	1 cut(s)	1513
PmlI	CACGTG	1 cut(s)	1513
PpsI	GAGTC	1 cut(s)	611
Ppu21I	YACGTR	1 cut(s)	1513
Psp124BI	GAGCTC	1 cut(s)	1147
Psp1406I	AACGTT	1 cut(s)	294
Psp6I	CCWGG	2 cut(s)	13, 2026
PspCI	CACGTG	1 cut(s)	1513
PspEI	GGTNACC	2 cut(s)	693, 748
PspFI	CCCAGC	2 cut(s)	689, 1561
PspGI	CCWGG	2 cut(s)	13, 2026
PspN4I	GGNNCC	6 cut(s)	79, 267, 960, 1590, 2025, 2043
PspPI	GGNCC	4 cut(s)	217, 244, 877, 2023
PsrI	GAACNNNNNNTAC	2 cut(s)	1601, 1633
PsuI	RGATCY	2 cut(s)	1087, 1135
RsaI	GTAC	3 cut(s)	518, 658, 780
RsaNI	GTAC	3 cut(s)	517, 657, 779
RseI	CAYNNNNRTG	4 cut(s)	1257, 1356, 1796, 2051
Rsr2I	CGGWCCG	1 cut(s)	217
RsrII	CGGWCCG	1 cut(s)	217
SacI	GAGCTC	1 cut(s)	1147
SapI	GCTCTTC	1 cut(s)	1374
Sau3AI	GATC	7 cut(s)	1087, 1135, 1397, 1570, 1765, 1830, 2108
Sau96I	GGNCC	4 cut(s)	217, 244, 877, 2023
ScaI	AGTACT	3 cut(s)	518, 658, 780
SchI	GAGTC	1 cut(s)	612
ScrFI	CCNGG	2 cut(s)	15, 2028
SduI	GDGCHC	2 cut(s)	170, 1147
SfaNI	GCATC	6 cut(s)	241, 412, 1228, 1435, 1547, 1825
SfoI	GGCGCC	1 cut(s)	79
SinI	GGWCC	3 cut(s)	217, 244, 877
SmiI	ATTTAAAT	1 cut(s)	645
SmiMI	CAYNNNNRTG	4 cut(s)	1257, 1356, 1796, 2051
SmlI	CTYRAG	4 cut(s)	598, 710, 1148, 1285
SmoI	CTYRAG	4 cut(s)	598, 710, 1148, 1285
SphI	GCATGC	1 cut(s)	2002
SseBI	AGGCCT	1 cut(s)	530
SspDI	GGCGCC	1 cut(s)	77
SspMI	CTAG	3 cut(s)	308, 1449, 1887
SstI	GAGCTC	1 cut(s)	1147
StuI	AGGCCT	1 cut(s)	530
StyD4I	CCNGG	2 cut(s)	13, 2026
StyI	CCWWGG	3 cut(s)	109, 1020, 1826
SwaI	ATTTAAAT	1 cut(s)	645
TaaI	ACNGT	2 cut(s)	656, 1267
TaiI	ACGT	3 cut(s)	55, 297, 1515
TaqI	TCGA	5 cut(s)	236, 273, 612, 1320, 1794
TaqII	GACCGA	1 cut(s)	234
TatI	WGTACW	3 cut(s)	516, 656, 778
TauI	GCSGC	4 cut(s)	78, 83, 104, 1946
TfiI	GAWTC	6 cut(s)	114, 222, 562, 1408, 1473, 1489
TscAI	CASTG	4 cut(s)	679, 828, 1270, 1419
TseFI	GTSAC	3 cut(s)	748, 1261, 1898
TseI	GCWGC	7 cut(s)	57, 83, 441, 482, 773, 1013, 1907
Tsp45I	GTSAC	3 cut(s)	748, 1261, 1898
TspDTI	ATGAA	5 cut(s)	305, 1318, 1698, 1751, 1811
TspRI	CASTG	4 cut(s)	679, 828, 1270, 1419
Vha464I	CTTAAG	3 cut(s)	710, 1148, 1285
VpaK11BI	GGWCC	3 cut(s)	217, 244, 877
XapI	RAATTY	6 cut(s)	201, 640, 740, 893, 1168, 1746
XceI	RCATGY	1 cut(s)	2002
XmiI	GTMKAC	2 cut(s)	459, 1269
XmnI	GAANNNNTTC	2 cut(s)	226, 1493
XspI	CTAG	3 cut(s)	308, 1449, 1887
ZrmI	AGTACT	3 cut(s)	518, 658, 780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.