Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001729

Physical Location & Seq

Genomic Coordinates Reverse (-)

59087573 .. 59095487

Gene Structure 7915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG330200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGACGGAAAGTCAAGGCGGCGACGCCGTCAAAATGCCGAAGCGGAACCGCCGCCAGCACCGCTTAATAGCCGTCACCGGAGCCGCCGCTCTCCTCGCTCTCGCCGTCAACCTCGGAATCACCGCCCTCAACTCTCACAGGAACAACAGAAAGAAGAAAGATCTTCAGGGCTCGAAGGTTCGAGTAGCTCTATCAGCGTCAGAGATTTTGAAATTGGCCGACCGAGTCATTTCCAAGTCAAAAGAGGTCCATGACGCTGTGGCTTCAGTTCCCCTAGATAAGGTTACGTATATGAATGTTATTTCACCTCTAGCTGAATTGGAAGCGCAGCAATTTCCGCTCGTTCAGTCTTGCGTGTTTCCAAAGATGGTGTCTACTAGTAATGATGTTCGAAAAGCAAGCGCTGAGGCCGAGCGGAGAATTGATGCACATGTTCTGACTTGCAGCATGCGTGAGGATGTGTACCGTGTTGTCAAAGCTTTTGCCACGAGAGGAGAGTGGGTGAATGCTGAAGCAAAGCACTATACTCAAGCCTTGATGAGAGACTTTGAACGTAATGGGTTGAATCTTACTTTAACTAAGAGAGAGGAGATGCAGCGTGTGAGAGTCCAAATTGATGAGCTAAGCTTGCGCTATATCCAAAATCTACAAGAGGATTGTTCTTTCCTTGTCTTCGCTGAGACTGAGTTGGCTGGGCTACCACAAGAGTTTCTCAAGAGCTTAGACAAAGCTGAAAATAGTAAATTGAAGGTGACCCTGAAAAGTCATCATGTGGCGGCAGTACTAGAACTTTGCGAGGTTGGAACAACAAGGAAGATGGTAGCAGTGGAATATGGAAAGAGGTGCGGAGACGTCAATCTTTCTATCTTAGAAGATTTGGTCCATCTGCGCCATAAGTTTGCTCGGTTACTTGGCTATTCAAATTATGCTGACTATGCTGTTGATCTTAGAATGGCAAAGACACCCGCAAAGGTTTTTGAGTTCTTAGAGGACATCTCCAATAGTTTGGCTGACTCAGCTATGATGGAGCTTTCTATGTTGAAAGATTTGAAGAAAAAAGAGGAAGGAGACTATCCATTTGGAGTTGAGGATCTACTATACTATGTGAAGAAGGCTGAAGAACAGCAGTTTAATTTTGACTTTGGAGCTCTCAAGCAATACTTTCCGGTAAACTTGGTTCTATCTGGGGTCTTCAAGATAGTCCAAGACCTGTTTGGTTTAAGGTTTGAGGAAATTACAGATGCTGAGGTTTGGCATTCTGATGTTTCGGCGTATTCAGTTTTTGACCTGAGTTCTGGTGAACTGTTGGGTCATTTCTACCTCGATATGTACACAAGGCAAGAAAAATATAGTCATACATGTGTGGTGGCTCTTCAAAATGGTGCTTTATCATCCAATGGATCACGTCAGATCCCAGTTGCATTATTGATATTTCAAGTCCAAAAGGATGTTTTCGGTCATCCTGCATTACTGCGATTTTCTGAAGTTGTGAACCTTTTTCACGAGTTTGGCCATGTGGTCCAACATATTTGCAATCGTGCATCATTCTCCAAGTTTTCTGGTCTGGGTTTTGATCCAGACTTTGTGGAGGTTCCTGCTCAGGTGCTAGAGAATTGGTGTTATGAAAGCTTCAGTTTGAAGTTGATATCCGGCTTCCATCAGGATATGACAAAGCCTATCAAAGATGAAATGTGCAGATCCATTAAAAGATGGCGATATTCCTTTTCAGCCCTCAAAATGAAGCAAGAAATTCTTTATTGTCTTTTCGACCAAATCATACATTCTGCTGAAAATGTTGACATAGTTGAGTTATTCAAGCATCTTCATCCAAGGATCATGTTAGGTTTGCCAGCACTGGAGGGTGTCAATCCAGCTTCACGGTTTCCATGTAGTGCCATTGGTTATGAATCTTCTTGTTACAGCCGTATTTGGAGTGAGGTCTTTACTGCGGATATATTTGCCTCAAAGTTTCATGATAGTTATTTGAATCAGTATGCTGGCATGCAGTTCAGGAACAAGGTATTGGCCCCAGGAGGATCAAAAGAACCGATTGAAGTGTTAACAGGCTTTCTTGGGAGAGAACCATCAACTCAAGCTTTTATCGACAGTAGATCCCCATACAGATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005758 GO:0005829 GO:0005886 GO:0006109 GO:0006111 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009889 GO:0009987 GO:0010675 GO:0010830 GO:0010906 GO:0016020 GO:0016202 GO:0016787 GO:0019222 GO:0019538 GO:0031323 GO:0031967 GO:0031970 GO:0031974 GO:0031975 GO:0033218 GO:0034641 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043255 GO:0043603 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0048634 GO:0048641 GO:0050789 GO:0050793 GO:0050794 GO:0051147 GO:0051153 GO:0051239 GO:0062012 GO:0065007 GO:0070011 GO:0070012 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:0140096 GO:1901564 GO:1901861 GO:1902809 GO:2000026 GO:2001014

KEGG Pathways

Metabolic & Signaling

ko04614 ko05143 map04614 map05143

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

709

Amino Acids

80.39

Weight (kDa)

6.88

Isoelectric Point (pI)

39.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M3	PF01432	264 - 703	1.5e-99	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67690
fragaria_vesca	FvH4_4g24570 FvH4_4g24570 FvH4_4g24570 FvH4_4g24570
malus_domestica	MD02G1151800.v1.1 MD13G1110200.v1.1 MD16G1110100.v1.1 MD16G1110200.v1.1
prunus_persica	Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1
pyrus_communis	pycom13g09590 pycom16g09360
rosa_chinensis	RchiOBHm_Chr4g0431491 RchiOBHm_Chr4g0431531 RchiOBHm_Chr4g0444651
rosa_laevigata	RLG00000006910 RLG00000018869 RLG00000036429
rosa_multiflora	Rmu_sc0000543.1_g000041 Rmu_sc0001207.1_g000024
rosa_roxburghii	Rroxscaffold_5G00372940 Rroxscaffold_5G00372960 Rroxscaffold_5G00372990 Rroxscaffold_5G00373020
rosa_rugosa	Rorug04G0250600 Rorug04G0250700
rosa_samantha	Rh2AG013000 Rh2AG278200 Rh4AG306800 Rh4AG307200 Rh4AG307400 Rh4BG314800 Rh4BG315100 Rh4CG330200 Rh4DG310000 Rh4DG310100 Rh4DG421900 Rh5AG518200 Rh5DG435400 Rh6CG219500
rosa_wichuraiana	Rw4G026630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	855
AccBSI	CCGCTC	3 cut(s)	89, 340, 415
AccI	GTMKAC	1 cut(s)	374
AclWI	GGATC	8 cut(s)	1098, 1405, 1408, 1568, 1692, 1841, 2044, 2106
AcoI	YGGCCR	2 cut(s)	216, 1510
AcsI	RAATTY	1 cut(s)	1749
AcuI	CTGAAG	6 cut(s)	149, 249, 531, 1137, 1503, 1615
AcyI	GRCGYC	2 cut(s)	24, 852
AfaI	GTAC	3 cut(s)	464, 783, 1331
AfeI	AGCGCT	1 cut(s)	403
AfiI	CCNNNNNNNGG	1 cut(s)	280
AflIII	ACRYGT	2 cut(s)	430, 1358
AhdI	GACNNNNNGTC	1 cut(s)	9
AhlI	ACTAGT	1 cut(s)	377
AjiI	CACGTC	1 cut(s)	1406
AjnI	CCWGG	1 cut(s)	2029
AjuI	GAANNNNNNNTTGG	2 cut(s)	2006, 2038
Alw21I	GWGCWC	1 cut(s)	1150
Alw26I	GTCTC	4 cut(s)	537, 674, 843, 1062
AlwI	GGATC	8 cut(s)	1098, 1405, 1408, 1568, 1692, 1841, 2044, 2106
AlwNI	CAGNNNCTG	1 cut(s)	1244
Aor51HI	AGCGCT	1 cut(s)	403
AoxI	GGCC	4 cut(s)	216, 408, 1510, 2025
ApeKI	GCWGC	3 cut(s)	328, 444, 595
ApoI	RAATTY	1 cut(s)	1749
ArsI	GACNNNNNNTTYG	4 cut(s)	356, 388, 1061, 1093
AspLEI	GCGC	4 cut(s)	328, 404, 633, 891
AspS9I	GGNCC	4 cut(s)	247, 880, 1519, 2026
AsuHPI	GGTGA	6 cut(s)	67, 112, 297, 514, 763, 1310
AsuII	TTCGAA	1 cut(s)	391
AvaII	GGWCC	3 cut(s)	247, 880, 1519
BalI	TGGCCA	1 cut(s)	1512
BanII	GRGCYC	2 cut(s)	173, 1150
BauI	CACGAG	2 cut(s)	487, 1502
BbsI	GAAGAC	2 cut(s)	664, 1183
Bbv12I	GWGCWC	1 cut(s)	1150
BbvCI	CCTCAGC	2 cut(s)	405, 1245
BbvI	GCAGC	3 cut(s)	340, 456, 607
BccI	CCATC	7 cut(s)	361, 811, 891, 1018, 1665, 1704, 2092
BceAI	ACGGC	4 cut(s)	11, 56, 89, 1908
BciT130I	CCWGG	1 cut(s)	2031
BcoDI	GTCTC	4 cut(s)	537, 674, 843, 1062
BcuI	ACTAGT	1 cut(s)	377
BfaI	CTAG	5 cut(s)	275, 311, 378, 785, 1607
BfoI	RGCGCY	1 cut(s)	405
BglII	AGATCT	1 cut(s)	160
BisI	GCNGC	8 cut(s)	19, 52, 84, 87, 329, 445, 596, 777
BlpI	GCTNAGC	1 cut(s)	623
BlsI	GCNGC	8 cut(s)	20, 53, 85, 88, 330, 446, 597, 778
BmcAI	AGTACT	1 cut(s)	783
Bme1390I	CCNGG	1 cut(s)	2031
Bme18I	GGWCC	3 cut(s)	247, 880, 1519
BmeRI	GACNNNNNGTC	1 cut(s)	9
BmgBI	CACGTC	1 cut(s)	1406
BmgT120I	GGNCC	4 cut(s)	247, 880, 1519, 2026
BmiI	GGNNCC	4 cut(s)	47, 82, 1593, 2028
BmrFI	CCNGG	1 cut(s)	2031
BmrI	ACTGGG	1 cut(s)	1409
BmsI	GCATC	5 cut(s)	415, 582, 1231, 1550, 1828
BmuI	ACTGGG	1 cut(s)	1409
BpiI	GAAGAC	2 cut(s)	664, 1183
BplI	GAGNNNNNCTC	2 cut(s)	980, 1012
BpmI	CTGGAG	1 cut(s)	1877
Bpu10I	CCTNAGC	3 cut(s)	405, 1245, 1599
Bpu1102I	GCTNAGC	1 cut(s)	623
Bpu14I	TTCGAA	1 cut(s)	391
BpuEI	CTTGAG	4 cut(s)	513, 698, 1136, 2076
BsaAI	YACGTR	1 cut(s)	288
BsaHI	GRCGYC	2 cut(s)	24, 852
BsaJI	CCNNGG	3 cut(s)	112, 1829, 2029
BsaWI	WCCGGW	2 cut(s)	77, 1165
BsaXI	ACNNNNNCTCC	2 cut(s)	486, 516
Bsc4I	CCNNNNNNNGG	1 cut(s)	280
Bse1I	ACTGG	2 cut(s)	1415, 1860
BseBI	CCWGG	1 cut(s)	2031
BseDI	CCNNGG	3 cut(s)	112, 1829, 2029
BseGI	GGATG	5 cut(s)	463, 1391, 1453, 1459, 1825
BseLI	CCNNNNNNNGG	1 cut(s)	280
BseMII	CTCAG	7 cut(s)	396, 669, 675, 1029, 1236, 1280, 1613
BseNI	ACTGG	2 cut(s)	1415, 1860
BseRI	GAGGAG	3 cut(s)	83, 507, 602
BseXI	GCAGC	3 cut(s)	340, 456, 607
BseYI	CCCAGC	1 cut(s)	692
BsgI	GTGCAG	1 cut(s)	1714
Bsh1285I	CGRYCG	1 cut(s)	223
BshFI	GGCC	4 cut(s)	218, 410, 1512, 2027
BsiEI	CGRYCG	1 cut(s)	223
BsiHKAI	GWGCWC	1 cut(s)	1150
BsiSI	CCGG	3 cut(s)	78, 1166, 1650
BslI	CCNNNNNNNGG	1 cut(s)	280
BsmAI	GTCTC	4 cut(s)	537, 674, 843, 1062
BsmBI	CGTCTC	1 cut(s)	843
BsmI	GAATGC	2 cut(s)	511, 1255
BsnI	GGCC	4 cut(s)	218, 410, 1512, 2027
Bsp119I	TTCGAA	1 cut(s)	391
Bsp1286I	GDGCHC	2 cut(s)	173, 1150
Bsp1407I	TGTACA	1 cut(s)	1329
Bsp1720I	GCTNAGC	1 cut(s)	623
BspANI	GGCC	4 cut(s)	218, 410, 1512, 2027
BspCNI	CTCAG	7 cut(s)	397, 670, 676, 1028, 1237, 1281, 1612
BspHI	TCATGA	1 cut(s)	1972
BspLI	GGNNCC	4 cut(s)	47, 82, 1593, 2028
BspPI	GGATC	8 cut(s)	1098, 1405, 1408, 1568, 1692, 1841, 2044, 2106
BspQI	GCTCTTC	1 cut(s)	1377
BspT104I	TTCGAA	1 cut(s)	391
BsrBI	CCGCTC	3 cut(s)	89, 340, 415
BsrGI	TGTACA	1 cut(s)	1329
BsrI	ACTGG	2 cut(s)	1415, 1860
BssECI	CCNNGG	3 cut(s)	112, 1829, 2029
BssNI	GRCGYC	2 cut(s)	24, 852
BssSI	CACGAG	2 cut(s)	487, 1502
BssT1I	CCWWGG	1 cut(s)	1829
Bst2BI	CACGAG	2 cut(s)	487, 1502
Bst2UI	CCWGG	1 cut(s)	2031
Bst4CI	ACNGT	4 cut(s)	467, 1305, 1881, 2108
Bst6I	CTCTTC	1 cut(s)	1377
BstACI	GRCGYC	2 cut(s)	24, 852
BstAUI	TGTACA	1 cut(s)	1329
BstBAI	YACGTR	1 cut(s)	288
BstBI	TTCGAA	1 cut(s)	391
BstC8I	GCNNGC	7 cut(s)	56, 400, 449, 629, 1851, 1999, 2003
BstEII	GGTNACC	1 cut(s)	751
BstENI	CCTNNNNNAGG	1 cut(s)	278
BstF5I	GGATG	5 cut(s)	463, 1391, 1453, 1459, 1825
BstH2I	RGCGCY	1 cut(s)	405
BstHHI	GCGC	4 cut(s)	328, 404, 633, 891
BstMAI	GTCTC	4 cut(s)	537, 674, 843, 1062
BstMCI	CGRYCG	1 cut(s)	223
BstMWI	GCNNNNNNNGC	7 cut(s)	60, 95, 194, 337, 628, 935, 1016
BstNI	CCWGG	1 cut(s)	2031
BstNSI	RCATGY	4 cut(s)	434, 451, 1362, 2005
BstPI	GGTNACC	1 cut(s)	751
BstSCI	CCNGG	1 cut(s)	2029
BstSNI	TACGTA	1 cut(s)	288
BstV1I	GCAGC	3 cut(s)	340, 456, 607
BstV2I	GAAGAC	2 cut(s)	664, 1183
BstX2I	RGATCY	5 cut(s)	160, 1090, 1410, 1697, 2111
BstXI	CCANNNNNNTGG	1 cut(s)	1006
BstYI	RGATCY	5 cut(s)	160, 1090, 1410, 1697, 2111
BsuRI	GGCC	4 cut(s)	218, 410, 1512, 2027
BtrI	CACGTC	1 cut(s)	1406
BtsCI	GGATG	5 cut(s)	463, 1391, 1453, 1459, 1825
BtsI	GCAGTG	1 cut(s)	831
BtsIMutI	CAGTG	2 cut(s)	831, 1853
Cac8I	GCNNGC	7 cut(s)	56, 400, 449, 629, 1851, 1999, 2003
CaiI	CAGNNNCTG	1 cut(s)	1244
CciI	TCATGA	1 cut(s)	1972
CfoI	GCGC	4 cut(s)	328, 404, 633, 891
Cfr13I	GGNCC	4 cut(s)	247, 880, 1519, 2026
CseI	GACGC	3 cut(s)	32, 186, 263
Csp6I	GTAC	3 cut(s)	463, 782, 1330
CviQI	GTAC	3 cut(s)	463, 782, 1330
DriI	GACNNNNNGTC	1 cut(s)	9
EaeI	YGGCCR	2 cut(s)	216, 1510
Eam1104I	CTCTTC	1 cut(s)	1377
Eam1105I	GACNNNNNGTC	1 cut(s)	9
EarI	CTCTTC	1 cut(s)	1377
Ecl136II	GAGCTC	1 cut(s)	1148
Eco105I	TACGTA	1 cut(s)	288
Eco130I	CCWWGG	1 cut(s)	1829
Eco24I	GRGCYC	2 cut(s)	173, 1150
Eco32I	GATATC	1 cut(s)	1647
Eco47I	GGWCC	3 cut(s)	247, 880, 1519
Eco47III	AGCGCT	1 cut(s)	403
Eco53kI	GAGCTC	1 cut(s)	1148
Eco57I	CTGAAG	6 cut(s)	149, 249, 531, 1137, 1503, 1615
Eco91I	GGTNACC	1 cut(s)	751
EcoICRI	GAGCTC	1 cut(s)	1148
EcoNI	CCTNNNNNAGG	1 cut(s)	278
EcoO65I	GGTNACC	1 cut(s)	751
EcoRII	CCWGG	1 cut(s)	2029
EcoRV	GATATC	1 cut(s)	1647
EcoT14I	CCWWGG	1 cut(s)	1829
EcoT38I	GRGCYC	2 cut(s)	173, 1150
ErhI	CCWWGG	1 cut(s)	1829
Esp3I	CGTCTC	1 cut(s)	843
FalI	AAGNNNNNCTT	4 cut(s)	1145, 1177, 1737, 1769
FauI	CCCGC	1 cut(s)	973
FblI	GTMKAC	1 cut(s)	374
Fnu4HI	GCNGC	8 cut(s)	19, 52, 84, 87, 329, 445, 596, 777
FokI	GGATG	5 cut(s)	470, 1378, 1446, 1460, 1812
FriOI	GRGCYC	2 cut(s)	173, 1150
Fsp4HI	GCNGC	8 cut(s)	19, 52, 84, 87, 329, 445, 596, 777
FspBI	CTAG	5 cut(s)	275, 311, 378, 785, 1607
GlaI	GCGC	4 cut(s)	327, 403, 632, 890
GluI	GCNGC	8 cut(s)	19, 52, 84, 87, 329, 445, 596, 777
GsaI	CCCAGC	1 cut(s)	696
GsuI	CTGGAG	1 cut(s)	1877
HaeII	RGCGCY	1 cut(s)	405
HaeIII	GGCC	4 cut(s)	218, 410, 1512, 2027
HapII	CCGG	3 cut(s)	78, 1166, 1650
HgaI	GACGC	3 cut(s)	32, 186, 263
HhaI	GCGC	4 cut(s)	328, 404, 633, 891
Hin1I	GRCGYC	2 cut(s)	24, 852
Hin6I	GCGC	4 cut(s)	326, 402, 631, 889
HinP1I	GCGC	4 cut(s)	326, 402, 631, 889
HincII	GTYRAC	3 cut(s)	109, 1798, 2061
HindII	GTYRAC	3 cut(s)	109, 1798, 2061
HindIII	AAGCTT	4 cut(s)	477, 625, 1627, 2094
HinfI	GANTC	7 cut(s)	117, 225, 565, 606, 1013, 1907, 1987
HpaI	GTTAAC	1 cut(s)	2061
HpaII	CCGG	3 cut(s)	78, 1166, 1650
HphI	GGTGA	6 cut(s)	67, 112, 297, 514, 763, 1310
Hpy166II	GTNNAC	9 cut(s)	109, 375, 463, 1171, 1301, 1332, 1492, 1798, 2061
Hpy188I	TCNGA	6 cut(s)	116, 202, 438, 1261, 1410, 1483
Hpy188III	TCNNGA	7 cut(s)	715, 1195, 1502, 1577, 1661, 1973, 2011
Hpy8I	GTNNAC	9 cut(s)	109, 375, 463, 1171, 1301, 1332, 1492, 1798, 2061
Hpy99I	CGWCG	1 cut(s)	26
HpyAV	CCTTC	4 cut(s)	169, 742, 1058, 1105
HpyCH4III	ACNGT	4 cut(s)	467, 1305, 1881, 2108
HpyCH4IV	ACGT	4 cut(s)	287, 553, 852, 1405
HpyCH4V	TGCA	9 cut(s)	428, 444, 595, 1421, 1466, 1533, 1541, 1695, 2005
HpyF10VI	GCNNNNNNNGC	7 cut(s)	60, 95, 194, 337, 628, 935, 1016
HpySE526I	ACGT	4 cut(s)	287, 553, 852, 1405
Hsp92I	GRCGYC	2 cut(s)	24, 852
HspAI	GCGC	4 cut(s)	326, 402, 631, 889
KspAI	GTTAAC	1 cut(s)	2061
LguI	GCTCTTC	1 cut(s)	1377
LmnI	GCTCC	3 cut(s)	80, 1027, 1145
Lsp1109I	GCAGC	3 cut(s)	340, 456, 607
LweI	GCATC	5 cut(s)	415, 582, 1231, 1550, 1828
MaeI	CTAG	5 cut(s)	275, 311, 378, 785, 1607
MaeII	ACGT	4 cut(s)	287, 553, 852, 1405
MaeIII	GTNAC	5 cut(s)	73, 283, 751, 906, 1916
MbiI	CCGCTC	3 cut(s)	89, 340, 415
MflI	RGATCY	5 cut(s)	160, 1090, 1410, 1697, 2111
MhlI	GDGCHC	2 cut(s)	173, 1150
MlsI	TGGCCA	1 cut(s)	1512
MluNI	TGGCCA	1 cut(s)	1512
MlyI	GAGTC	3 cut(s)	234, 615, 1007
MmeI	TCCRAC	2 cut(s)	781, 1546
Mox20I	TGGCCA	1 cut(s)	1512
MscI	TGGCCA	1 cut(s)	1512
MseI	TTAA	6 cut(s)	65, 575, 1131, 1220, 1704, 2060
MslI	CAYNNNNRTG	2 cut(s)	1260, 1359
Msp20I	TGGCCA	1 cut(s)	1512
MspI	CCGG	3 cut(s)	78, 1166, 1650
MspR9I	CCNGG	1 cut(s)	2031
Mva1269I	GAATGC	2 cut(s)	511, 1255
MvaI	CCWGG	1 cut(s)	2031
MwoI	GCNNNNNNNGC	7 cut(s)	60, 95, 194, 337, 628, 935, 1016
NlaIV	GGNNCC	4 cut(s)	47, 82, 1593, 2028
NmeAIII	GCCGAG	1 cut(s)	436
NmuCI	GTSAC	2 cut(s)	73, 751
NspI	RCATGY	4 cut(s)	434, 451, 1362, 2005
NspV	TTCGAA	1 cut(s)	391
PaeI	GCATGC	2 cut(s)	451, 2005
PagI	TCATGA	1 cut(s)	1972
PciI	ACATGT	2 cut(s)	430, 1358
PciSI	GCTCTTC	1 cut(s)	1377
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PctI	GAATGC	2 cut(s)	511, 1255
PfeI	GAWTC	4 cut(s)	117, 565, 1907, 1987
PflFI	GACNNNGTC	2 cut(s)	26, 224
PkrI	GCNGC	8 cut(s)	20, 53, 85, 88, 330, 446, 597, 778
PleI	GAGTC	3 cut(s)	233, 614, 1007
PpsI	GAGTC	3 cut(s)	233, 614, 1007
Ppu21I	YACGTR	1 cut(s)	288
PscI	ACATGT	2 cut(s)	430, 1358
Psp124BI	GAGCTC	1 cut(s)	1150
Psp6I	CCWGG	1 cut(s)	2029
PspEI	GGTNACC	1 cut(s)	751
PspFI	CCCAGC	1 cut(s)	692
PspGI	CCWGG	1 cut(s)	2029
PspN4I	GGNNCC	4 cut(s)	47, 82, 1593, 2028
PspPI	GGNCC	4 cut(s)	247, 880, 1519, 2026
PsrI	GAACNNNNNNTAC	2 cut(s)	1161, 1193
PstNI	CAGNNNCTG	1 cut(s)	1244
PsuI	RGATCY	5 cut(s)	160, 1090, 1410, 1697, 2111
PsyI	GACNNNGTC	2 cut(s)	26, 224
RsaI	GTAC	3 cut(s)	464, 783, 1331
RsaNI	GTAC	3 cut(s)	463, 782, 1330
RseI	CAYNNNNRTG	2 cut(s)	1260, 1359
SacI	GAGCTC	1 cut(s)	1150
SapI	GCTCTTC	1 cut(s)	1377
SaqAI	TTAA	6 cut(s)	65, 575, 1131, 1220, 1704, 2060
SatI	GCNGC	8 cut(s)	19, 52, 84, 87, 329, 445, 596, 777
Sau96I	GGNCC	4 cut(s)	247, 880, 1519, 2026
ScaI	AGTACT	1 cut(s)	783
SchI	GAGTC	3 cut(s)	234, 615, 1007
ScrFI	CCNGG	1 cut(s)	2031
SduI	GDGCHC	2 cut(s)	173, 1150
SfaNI	GCATC	5 cut(s)	415, 582, 1231, 1550, 1828
SfuI	TTCGAA	1 cut(s)	391
SinI	GGWCC	3 cut(s)	247, 880, 1519
SmiMI	CAYNNNNRTG	2 cut(s)	1260, 1359
SmlI	CTYRAG	4 cut(s)	528, 713, 1151, 2091
SmoI	CTYRAG	4 cut(s)	528, 713, 1151, 2091
SnaBI	TACGTA	1 cut(s)	288
SpeI	ACTAGT	1 cut(s)	377
SphI	GCATGC	2 cut(s)	451, 2005
SspMI	CTAG	5 cut(s)	275, 311, 378, 785, 1607
SstI	GAGCTC	1 cut(s)	1150
StyD4I	CCNGG	1 cut(s)	2029
StyI	CCWWGG	1 cut(s)	1829
TaaI	ACNGT	4 cut(s)	467, 1305, 1881, 2108
TaiI	ACGT	4 cut(s)	290, 556, 855, 1408
TaqI	TCGA	6 cut(s)	173, 181, 391, 1323, 1767, 2103
TaqII	GACCGA	2 cut(s)	237, 1445
TatI	WGTACW	2 cut(s)	781, 1329
TauI	GCSGC	5 cut(s)	21, 54, 86, 89, 779
TfiI	GAWTC	4 cut(s)	117, 565, 1907, 1987
Tru1I	TTAA	6 cut(s)	65, 575, 1131, 1220, 1704, 2060
Tru9I	TTAA	6 cut(s)	65, 575, 1131, 1220, 1704, 2060
TscAI	CASTG	2 cut(s)	831, 1860
TseFI	GTSAC	2 cut(s)	73, 751
TseI	GCWGC	3 cut(s)	328, 444, 595
Tsp45I	GTSAC	2 cut(s)	73, 751
TspDTI	ATGAA	7 cut(s)	308, 1638, 1701, 1754, 1814, 1920, 1961
TspGWI	ACGGA	1 cut(s)	20
TspRI	CASTG	2 cut(s)	831, 1860
Tth111I	GACNNNGTC	2 cut(s)	26, 224
VpaK11BI	GGWCC	3 cut(s)	247, 880, 1519
XagI	CCTNNNNNAGG	1 cut(s)	278
XapI	RAATTY	1 cut(s)	1749
XceI	RCATGY	4 cut(s)	434, 451, 1362, 2005
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1211
XmiI	GTMKAC	1 cut(s)	374
XspI	CTAG	5 cut(s)	275, 311, 378, 785, 1607
ZraI	GACGTC	1 cut(s)	853
ZrmI	AGTACT	1 cut(s)	783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.