RchiOBHm_Chr4g0431531

thimet oligopeptidase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
55747355 .. 55747885
531 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40018

Sequence Viewer

Length: 207 bp
ATGCAGCGTGTGAGAGTCCAAATTGATGAGCTAAGCTTGTGCTATATCCAAAATCTACAAGAGGATTGTTCTTTCCTTGTCTTCACTGAGACTAAGTTGGCTGGGGTACCACAAGAGTTTCTCAAGGTATATATTTTTCCCATCATTTTTAAATCAACCATATTGAACACCGCATATGCAAGTTCACTTGGGCTGTATTGTGGATGA

Protein Analysis

68

Amino Acids

7.77

Weight (kDa)

5.05

Isoelectric Point (pI)

34.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 106
AccB1I GGYRCC 1 cut(s) 106
AciI CCGC 1 cut(s) 171
AfaI GTAC 1 cut(s) 108
AgsI TTSAA 1 cut(s) 166
AluBI AGCT 2 cut(s) 31, 36
AluI AGCT 2 cut(s) 31, 36
Alw26I GTCTC 1 cut(s) 83
ApeKI GCWGC 1 cut(s) 4
Asp718I GGTACC 1 cut(s) 106
BanI GGYRCC 1 cut(s) 106
BbsI GAAGAC 1 cut(s) 73
BbvI GCAGC 1 cut(s) 16
BccI CCATC 1 cut(s) 149
BcoDI GTCTC 1 cut(s) 83
BisI GCNGC 1 cut(s) 5
BlpI GCTNAGC 1 cut(s) 32
BlsI GCNGC 1 cut(s) 6
BmiI GGNNCC 1 cut(s) 108
BpiI GAAGAC 1 cut(s) 73
Bpu1102I GCTNAGC 1 cut(s) 32
BpuEI CTTGAG 1 cut(s) 107
BseMII CTCAG 1 cut(s) 78
BseXI GCAGC 1 cut(s) 16
BseYI CCCAGC 1 cut(s) 101
BshNI GGYRCC 1 cut(s) 106
BsmAI GTCTC 1 cut(s) 83
Bsp1720I GCTNAGC 1 cut(s) 32
BspACI CCGC 1 cut(s) 171
BspCNI CTCAG 1 cut(s) 79
BspLI GGNNCC 1 cut(s) 108
BspT107I GGYRCC 1 cut(s) 106
BstDEI CTNAG 3 cut(s) 32, 87, 93
BstMAI GTCTC 1 cut(s) 83
BstV1I GCAGC 1 cut(s) 16
BstV2I GAAGAC 1 cut(s) 73
BtsIMutI CAGTG 1 cut(s) 84
Csp6I GTAC 1 cut(s) 107
CviJI RGCY 4 cut(s) 31, 36, 101, 193
CviKI_1 RGCY 4 cut(s) 31, 36, 101, 193
CviQI GTAC 1 cut(s) 107
DdeI CTNAG 3 cut(s) 32, 87, 93
DraI TTTAAA 1 cut(s) 151
FaiI YATR 6 cut(s) 45, 130, 132, 161, 175, 177
FauNDI CATATG 1 cut(s) 175
Fnu4HI GCNGC 1 cut(s) 5
Fsp4HI GCNGC 1 cut(s) 5
GluI GCNGC 1 cut(s) 5
GsaI CCCAGC 1 cut(s) 105
HindIII AAGCTT 1 cut(s) 34
HinfI GANTC 1 cut(s) 15
Hpy166II GTNNAC 1 cut(s) 185
Hpy8I GTNNAC 1 cut(s) 185
HpyCH4V TGCA 2 cut(s) 4, 179
HpyF3I CTNAG 3 cut(s) 32, 87, 93
KpnI GGTACC 1 cut(s) 110
LpnPI CCDG 1 cut(s) 87
Lsp1109I GCAGC 1 cut(s) 16
MboII GAAGA 1 cut(s) 73
MluCI AATT 1 cut(s) 21
MlyI GAGTC 1 cut(s) 24
MnlI CCTC 1 cut(s) 55
MseI TTAA 1 cut(s) 150
NdeI CATATG 1 cut(s) 175
NlaIV GGNNCC 1 cut(s) 108
PkrI GCNGC 1 cut(s) 6
PleI GAGTC 1 cut(s) 23
PpsI GAGTC 1 cut(s) 23
PspFI CCCAGC 1 cut(s) 101
PspN4I GGNNCC 1 cut(s) 108
RsaI GTAC 1 cut(s) 108
RsaNI GTAC 1 cut(s) 107
SaqAI TTAA 1 cut(s) 150
SatI GCNGC 1 cut(s) 5
SchI GAGTC 1 cut(s) 24
SetI ASST 3 cut(s) 33, 38, 129
SgeI CNNG 9 cut(s) 20, 49, 71, 89, 114, 125, 136, 192, 200
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
Sse9I AATT 1 cut(s) 21
SsiI CCGC 1 cut(s) 171
TasI AATT 1 cut(s) 21
Tru1I TTAA 1 cut(s) 150
Tru9I TTAA 1 cut(s) 150
TscAI CASTG 1 cut(s) 91
TseI GCWGC 1 cut(s) 4
TspRI CASTG 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.