Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001729

Physical Location & Seq

Genomic Coordinates Reverse (-)

55706339 .. 55714221

Gene Structure 7883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40014

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGACGGAAAGTCAAGGCGGCGACGTCAAAATGCCGAAGCGGAACCACCGCCAGCACCGCCTAATAGCCGTCACCGGAGCCGCCGCTCTCCTCGCTCTCGCCGTCAACCTCGGAATCACCGCCTTCAACTCTCACAGGAACAACAGAAAGAAGAAAGATCTTCAGGGCTCGAAGGTTCGAGTTACTCTATCGGCTTCGGAGATTTTGAAATTGGCCGACCGAGTCATTTCCAAGTCAAAAGAGGTCCACGACGCTGTGGCTTCGGTTCCGCTAGATAAGGTTACGTATATGAATGTTATTTCACCTCTAGCTGAATTGGAAGCGCAGCAATTTCCGCTCGTTCAGTCTTGCGTGTTTCCAAAGATGGTGTCTACTAGTAATGATGTTCGAAAAGCAAGCGCTGAGGCCGAGCGGAGAATTGATGCACATGTTCAGACTTGCAGCATGCGTGAGGATGTGTACCGTGTTGTCAAAGCTTTTGCTACGAGAGGAGAGTGGGTGAATGCTGAAGCAAAGCACTATACTCAAGCCTTGATGAGAGACTTTGAACGTAATGGGTTGAATCTTACTTTAACTAAGAGAGAGGAGATGCAGCGTGTGAGAGTCCAAATTGATGAGCTAAGCTTGCGCTATATCCAAAATCTACAAGAGGACTGTTCTTTCCTTGTCTTCACTGAGACTGAGTTGGCTGGGGTACCACAAGAGTTTCTCAAGAGCTTAGACAAAGCTGAAAATGGTAAATTGAAGGTGACCCTGAAAAGTCATCATGTGGCGGCGGTACTAGAACTTTGTGAGGTTGGAACAACAAGGAAGATGGTAGCAGTGGAATATGGAAAGAGGTGCGGAGACGTCAATCTTTGTATCTTAGAAGATTTGGTCCATCTGCGCCATAAGTTTGCTCGGTTACTTGGCTATTCAAATTATGCTGACCATGCTGTTGATCTTAGAATGGCAAAGACGCCCGCAAAGGTTTTTGAGTTCTTAGAGGACATCTCCAATAGTTTGGCTGACTCAGCTACGATGGAGCTTTCTATGTTGAAAGATTTGAAGAAAAAAGAGGAAGGAGACTATCCATTTGGAGTTGAGGATCTACTATACTATGTGAAGAAGGCTGAAGAACAGCAGTTTAATTTTGACTTTGGAGCTCTCAAGCAGTACTTTCCGGTAAACTTGGTTCTATCTGGGGTCTTCAAGATAGTCCAAGACCTGTTTGGTTTAAGGTTTGAGGAAATTACAGATGCTGAGGTTTGGCATTCTGATGTTTCGGCGTATTCAGTTTTTGACCTGAGTTCTGGTGAACTGTTGGGTCATTTCTACCTCGATATGTACACAAGGCAAGAAAAATATAGTCATACATGTGTGGTGGCTCTTCAAAATGGTGCTTTATCATCCAATGGATCACGTCAGATCCCAGTTGCATTATTGATATTTCAAGTCCAAAAGGATGTTATCGGTCATCCTGCATTACTGCGATTTTCTGAAGTTGTGAACCTTTTTCACGAGTTTGGCCATGTGGTCCAACATATTTGCAATCGTGCATCATTCTCCAAGTTTTCTGGTCTGGGTTTTGATCCAGACTTTGTGGAGGTTCCTGCTCAGGTGCTAGAGAATTGGTGTTATGAAAGCTTCAGTTTGAAGTTGATATCCGGCTTCCATCAGGATATGACAAAGCCTATCAAAGATGAAATGTGCAGATCCATTAAAAGATGGCGATATTCCTTTTCAGCCCTCAAAATGAAGCAAGAAATTCTTTATTGTCTTTTCGACCAAATCATACATTCTGCTGAAAATGTTGACATAGTTGAGTTATTCAAGCATCTTCATCCAAGGATCATGTTAGGTTTGCCAGCACTGGAGGGTGTCAATCCAGCTTCACGGTTTCCATGTAGTGCCATTGGTTATGAATCTTCTTGTTACAGCCGTATTTGGAGCGAGGTCTTTACTGCGGATATATTTGCCTCAAAGTTTCATGATAGTTATTTAAACCAGTATGCTGGCATGCAGTTCAGGAACAAGGTATTGGCCCCAGGAGGATCAAAAGAACCGATTGAAGTGTTAACAGGCTTTCTTGGGAGAGAACCATCAACTCAAGCTTTTATCGACAGTAGATCCCCATACAGATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005758 GO:0005829 GO:0005886 GO:0006109 GO:0006111 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009889 GO:0009987 GO:0010675 GO:0010830 GO:0010906 GO:0016020 GO:0016202 GO:0016787 GO:0019222 GO:0019538 GO:0031323 GO:0031967 GO:0031970 GO:0031974 GO:0031975 GO:0033218 GO:0034641 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043255 GO:0043603 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0048634 GO:0048641 GO:0050789 GO:0050793 GO:0050794 GO:0051147 GO:0051153 GO:0051239 GO:0062012 GO:0065007 GO:0070011 GO:0070012 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:0140096 GO:1901564 GO:1901861 GO:1902809 GO:2000026 GO:2001014

KEGG Pathways

Metabolic & Signaling

ko04614 ko05143 map04614 map05143

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

708

Amino Acids

80.29

Weight (kDa)

6.77

Isoelectric Point (pI)

37.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M3	PF01432	263 - 702	2.6e-99	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67690
fragaria_vesca	FvH4_4g24570 FvH4_4g24570 FvH4_4g24570 FvH4_4g24570
malus_domestica	MD02G1151800.v1.1 MD13G1110200.v1.1 MD16G1110100.v1.1 MD16G1110200.v1.1
prunus_persica	Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1 Prupe.1G234500_v2.0.a1
pyrus_communis	pycom13g09590 pycom16g09360
rosa_chinensis	RchiOBHm_Chr4g0431491 RchiOBHm_Chr4g0431531 RchiOBHm_Chr4g0444651
rosa_laevigata	RLG00000006910 RLG00000018869 RLG00000036429
rosa_multiflora	Rmu_sc0000543.1_g000041 Rmu_sc0001207.1_g000024
rosa_roxburghii	Rroxscaffold_5G00372940 Rroxscaffold_5G00372960 Rroxscaffold_5G00372990 Rroxscaffold_5G00373020
rosa_rugosa	Rorug04G0250600 Rorug04G0250700
rosa_samantha	Rh2AG013000 Rh2AG278200 Rh4AG306800 Rh4AG307200 Rh4AG307400 Rh4BG314800 Rh4BG315100 Rh4CG330200 Rh4DG310000 Rh4DG310100 Rh4DG421900 Rh5AG518200 Rh5DG435400 Rh6CG219500
rosa_wichuraiana	Rw4G026630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	27, 852
Acc65I	GGTACC	1 cut(s)	694
AccB1I	GGYRCC	1 cut(s)	694
AccBSI	CCGCTC	3 cut(s)	86, 337, 412
AccI	GTMKAC	1 cut(s)	371
AclWI	GGATC	8 cut(s)	1095, 1402, 1405, 1565, 1689, 1838, 2041, 2103
AcoI	YGGCCR	2 cut(s)	213, 1507
AcsI	RAATTY	1 cut(s)	1746
AcuI	CTGAAG	5 cut(s)	146, 528, 1134, 1500, 1612
AcyI	GRCGYC	3 cut(s)	24, 849, 959
AfaI	GTAC	5 cut(s)	461, 696, 780, 1157, 1328
AfeI	AGCGCT	1 cut(s)	400
AflIII	ACRYGT	2 cut(s)	427, 1355
AhdI	GACNNNNNGTC	1 cut(s)	9
AhlI	ACTAGT	1 cut(s)	374
AjiI	CACGTC	1 cut(s)	1403
AjnI	CCWGG	1 cut(s)	2026
AjuI	GAANNNNNNNTTGG	2 cut(s)	2003, 2035
Alw21I	GWGCWC	1 cut(s)	1147
Alw26I	GTCTC	4 cut(s)	534, 671, 840, 1059
AlwI	GGATC	8 cut(s)	1095, 1402, 1405, 1565, 1689, 1838, 2041, 2103
AlwNI	CAGNNNCTG	1 cut(s)	1241
Aor51HI	AGCGCT	1 cut(s)	400
AoxI	GGCC	4 cut(s)	213, 405, 1507, 2022
ApeKI	GCWGC	3 cut(s)	325, 441, 592
ApoI	RAATTY	1 cut(s)	1746
ArsI	GACNNNNNNTTYG	4 cut(s)	353, 385, 1058, 1090
Asp718I	GGTACC	1 cut(s)	694
AspLEI	GCGC	4 cut(s)	325, 401, 630, 888
AspS9I	GGNCC	4 cut(s)	244, 877, 1516, 2023
AsuHPI	GGTGA	6 cut(s)	64, 109, 294, 511, 760, 1307
AsuII	TTCGAA	1 cut(s)	388
AvaII	GGWCC	3 cut(s)	244, 877, 1516
BalI	TGGCCA	1 cut(s)	1509
BanI	GGYRCC	1 cut(s)	694
BanII	GRGCYC	2 cut(s)	170, 1147
BauI	CACGAG	1 cut(s)	1499
BbsI	GAAGAC	2 cut(s)	661, 1180
Bbv12I	GWGCWC	1 cut(s)	1147
BbvCI	CCTCAGC	2 cut(s)	402, 1242
BbvI	GCAGC	3 cut(s)	337, 453, 604
BccI	CCATC	7 cut(s)	358, 808, 888, 1015, 1662, 1701, 2089
BceAI	ACGGC	3 cut(s)	53, 86, 1905
BciT130I	CCWGG	1 cut(s)	2028
BcoDI	GTCTC	4 cut(s)	534, 671, 840, 1059
BcuI	ACTAGT	1 cut(s)	374
BfaI	CTAG	5 cut(s)	272, 308, 375, 782, 1604
BfoI	RGCGCY	1 cut(s)	402
BglII	AGATCT	1 cut(s)	157
BisI	GCNGC	7 cut(s)	19, 81, 84, 326, 442, 593, 774
BlpI	GCTNAGC	1 cut(s)	620
BlsI	GCNGC	7 cut(s)	20, 82, 85, 327, 443, 594, 775
BmcAI	AGTACT	1 cut(s)	1157
Bme1390I	CCNGG	1 cut(s)	2028
Bme18I	GGWCC	3 cut(s)	244, 877, 1516
BmeRI	GACNNNNNGTC	1 cut(s)	9
BmgBI	CACGTC	1 cut(s)	1403
BmgT120I	GGNCC	4 cut(s)	244, 877, 1516, 2023
BmiI	GGNNCC	6 cut(s)	44, 79, 267, 696, 1590, 2025
BmrFI	CCNGG	1 cut(s)	2028
BmrI	ACTGGG	1 cut(s)	1406
BmsI	GCATC	5 cut(s)	412, 579, 1228, 1547, 1825
BmuI	ACTGGG	1 cut(s)	1406
BpiI	GAAGAC	2 cut(s)	661, 1180
BplI	GAGNNNNNCTC	2 cut(s)	977, 1009
BpmI	CTGGAG	1 cut(s)	1874
Bpu10I	CCTNAGC	3 cut(s)	402, 1242, 1596
Bpu1102I	GCTNAGC	1 cut(s)	620
Bpu14I	TTCGAA	1 cut(s)	388
BpuEI	CTTGAG	4 cut(s)	510, 695, 1133, 2073
BsaAI	YACGTR	1 cut(s)	285
BsaHI	GRCGYC	3 cut(s)	24, 849, 959
BsaJI	CCNNGG	3 cut(s)	109, 1826, 2026
BsaWI	WCCGGW	2 cut(s)	74, 1162
BsaXI	ACNNNNNCTCC	2 cut(s)	483, 513
Bse1I	ACTGG	3 cut(s)	1412, 1857, 1987
BseBI	CCWGG	1 cut(s)	2028
BseDI	CCNNGG	3 cut(s)	109, 1826, 2026
BseGI	GGATG	5 cut(s)	460, 1388, 1450, 1456, 1822
BseMII	CTCAG	7 cut(s)	393, 666, 672, 1026, 1233, 1277, 1610
BseNI	ACTGG	3 cut(s)	1412, 1857, 1987
BseRI	GAGGAG	3 cut(s)	80, 504, 599
BseXI	GCAGC	3 cut(s)	337, 453, 604
BseYI	CCCAGC	1 cut(s)	689
BsgI	GTGCAG	1 cut(s)	1711
Bsh1285I	CGRYCG	1 cut(s)	220
BshFI	GGCC	4 cut(s)	215, 407, 1509, 2024
BshNI	GGYRCC	1 cut(s)	694
BsiEI	CGRYCG	1 cut(s)	220
BsiHKAI	GWGCWC	1 cut(s)	1147
BsiSI	CCGG	3 cut(s)	75, 1163, 1647
BsmAI	GTCTC	4 cut(s)	534, 671, 840, 1059
BsmBI	CGTCTC	1 cut(s)	840
BsmI	GAATGC	2 cut(s)	508, 1252
BsnI	GGCC	4 cut(s)	215, 407, 1509, 2024
Bsp119I	TTCGAA	1 cut(s)	388
Bsp1286I	GDGCHC	2 cut(s)	170, 1147
Bsp1407I	TGTACA	1 cut(s)	1326
Bsp1720I	GCTNAGC	1 cut(s)	620
BspANI	GGCC	4 cut(s)	215, 407, 1509, 2024
BspCNI	CTCAG	7 cut(s)	394, 667, 673, 1025, 1234, 1278, 1609
BspHI	TCATGA	1 cut(s)	1969
BspLI	GGNNCC	6 cut(s)	44, 79, 267, 696, 1590, 2025
BspPI	GGATC	8 cut(s)	1095, 1402, 1405, 1565, 1689, 1838, 2041, 2103
BspQI	GCTCTTC	1 cut(s)	1374
BspT104I	TTCGAA	1 cut(s)	388
BspT107I	GGYRCC	1 cut(s)	694
BsrBI	CCGCTC	3 cut(s)	86, 337, 412
BsrGI	TGTACA	1 cut(s)	1326
BsrI	ACTGG	3 cut(s)	1412, 1857, 1987
BssECI	CCNNGG	3 cut(s)	109, 1826, 2026
BssNI	GRCGYC	3 cut(s)	24, 849, 959
BssSI	CACGAG	1 cut(s)	1499
BssT1I	CCWWGG	1 cut(s)	1826
Bst2BI	CACGAG	1 cut(s)	1499
Bst2UI	CCWGG	1 cut(s)	2028
Bst4CI	ACNGT	5 cut(s)	464, 656, 1302, 1878, 2105
Bst6I	CTCTTC	1 cut(s)	1374
BstACI	GRCGYC	3 cut(s)	24, 849, 959
BstAUI	TGTACA	1 cut(s)	1326
BstBAI	YACGTR	1 cut(s)	285
BstBI	TTCGAA	1 cut(s)	388
BstC8I	GCNNGC	8 cut(s)	53, 397, 446, 626, 963, 1848, 1996, 2000
BstEII	GGTNACC	1 cut(s)	748
BstF5I	GGATG	5 cut(s)	460, 1388, 1450, 1456, 1822
BstH2I	RGCGCY	1 cut(s)	402
BstHHI	GCGC	4 cut(s)	325, 401, 630, 888
BstMAI	GTCTC	4 cut(s)	534, 671, 840, 1059
BstMCI	CGRYCG	1 cut(s)	220
BstMWI	GCNNNNNNNGC	6 cut(s)	57, 92, 334, 625, 932, 1013
BstNI	CCWGG	1 cut(s)	2028
BstNSI	RCATGY	4 cut(s)	431, 448, 1359, 2002
BstPI	GGTNACC	1 cut(s)	748
BstSCI	CCNGG	1 cut(s)	2026
BstSNI	TACGTA	1 cut(s)	285
BstV1I	GCAGC	3 cut(s)	337, 453, 604
BstV2I	GAAGAC	2 cut(s)	661, 1180
BstX2I	RGATCY	5 cut(s)	157, 1087, 1407, 1694, 2108
BstXI	CCANNNNNNTGG	2 cut(s)	1003, 1994
BstYI	RGATCY	5 cut(s)	157, 1087, 1407, 1694, 2108
BsuRI	GGCC	4 cut(s)	215, 407, 1509, 2024
BtrI	CACGTC	1 cut(s)	1403
BtsCI	GGATG	5 cut(s)	460, 1388, 1450, 1456, 1822
BtsI	GCAGTG	1 cut(s)	828
BtsIMutI	CAGTG	3 cut(s)	672, 828, 1850
Cac8I	GCNNGC	8 cut(s)	53, 397, 446, 626, 963, 1848, 1996, 2000
CaiI	CAGNNNCTG	1 cut(s)	1241
CciI	TCATGA	1 cut(s)	1969
CfoI	GCGC	4 cut(s)	325, 401, 630, 888
Cfr13I	GGNCC	4 cut(s)	244, 877, 1516, 2023
CseI	GACGC	2 cut(s)	260, 967
Csp6I	GTAC	5 cut(s)	460, 695, 779, 1156, 1327
CviQI	GTAC	5 cut(s)	460, 695, 779, 1156, 1327
DraI	TTTAAA	1 cut(s)	1983
DriI	GACNNNNNGTC	1 cut(s)	9
EaeI	YGGCCR	2 cut(s)	213, 1507
Eam1104I	CTCTTC	1 cut(s)	1374
Eam1105I	GACNNNNNGTC	1 cut(s)	9
EarI	CTCTTC	1 cut(s)	1374
Ecl136II	GAGCTC	1 cut(s)	1145
Eco105I	TACGTA	1 cut(s)	285
Eco130I	CCWWGG	1 cut(s)	1826
Eco24I	GRGCYC	2 cut(s)	170, 1147
Eco32I	GATATC	1 cut(s)	1644
Eco47I	GGWCC	3 cut(s)	244, 877, 1516
Eco47III	AGCGCT	1 cut(s)	400
Eco53kI	GAGCTC	1 cut(s)	1145
Eco57I	CTGAAG	5 cut(s)	146, 528, 1134, 1500, 1612
Eco91I	GGTNACC	1 cut(s)	748
EcoICRI	GAGCTC	1 cut(s)	1145
EcoO65I	GGTNACC	1 cut(s)	748
EcoRII	CCWGG	1 cut(s)	2026
EcoRV	GATATC	1 cut(s)	1644
EcoT14I	CCWWGG	1 cut(s)	1826
EcoT38I	GRGCYC	2 cut(s)	170, 1147
ErhI	CCWWGG	1 cut(s)	1826
Esp3I	CGTCTC	1 cut(s)	840
FalI	AAGNNNNNCTT	4 cut(s)	1142, 1174, 1734, 1766
FauI	CCCGC	1 cut(s)	970
FblI	GTMKAC	1 cut(s)	371
Fnu4HI	GCNGC	7 cut(s)	19, 81, 84, 326, 442, 593, 774
FokI	GGATG	5 cut(s)	467, 1375, 1443, 1457, 1809
FriOI	GRGCYC	2 cut(s)	170, 1147
Fsp4HI	GCNGC	7 cut(s)	19, 81, 84, 326, 442, 593, 774
FspBI	CTAG	5 cut(s)	272, 308, 375, 782, 1604
GlaI	GCGC	4 cut(s)	324, 400, 629, 887
GluI	GCNGC	7 cut(s)	19, 81, 84, 326, 442, 593, 774
GsaI	CCCAGC	1 cut(s)	693
GsuI	CTGGAG	1 cut(s)	1874
HaeII	RGCGCY	1 cut(s)	402
HaeIII	GGCC	4 cut(s)	215, 407, 1509, 2024
HapII	CCGG	3 cut(s)	75, 1163, 1647
HgaI	GACGC	2 cut(s)	260, 967
HhaI	GCGC	4 cut(s)	325, 401, 630, 888
Hin1I	GRCGYC	3 cut(s)	24, 849, 959
Hin6I	GCGC	4 cut(s)	323, 399, 628, 886
HinP1I	GCGC	4 cut(s)	323, 399, 628, 886
HincII	GTYRAC	3 cut(s)	106, 1795, 2058
HindII	GTYRAC	3 cut(s)	106, 1795, 2058
HindIII	AAGCTT	4 cut(s)	474, 622, 1624, 2091
HinfI	GANTC	6 cut(s)	114, 222, 562, 603, 1010, 1904
HpaI	GTTAAC	1 cut(s)	2058
HpaII	CCGG	3 cut(s)	75, 1163, 1647
HphI	GGTGA	6 cut(s)	64, 109, 294, 511, 760, 1307
Hpy188I	TCNGA	6 cut(s)	113, 199, 435, 1258, 1407, 1480
Hpy188III	TCNNGA	7 cut(s)	712, 1192, 1499, 1574, 1658, 1970, 2008
Hpy99I	CGWCG	2 cut(s)	26, 254
HpyAV	CCTTC	5 cut(s)	133, 166, 739, 1055, 1102
HpyCH4III	ACNGT	5 cut(s)	464, 656, 1302, 1878, 2105
HpyCH4IV	ACGT	5 cut(s)	24, 284, 550, 849, 1402
HpyCH4V	TGCA	9 cut(s)	425, 441, 592, 1418, 1463, 1530, 1538, 1692, 2002
HpyF10VI	GCNNNNNNNGC	6 cut(s)	57, 92, 334, 625, 932, 1013
HpySE526I	ACGT	5 cut(s)	24, 284, 550, 849, 1402
Hsp92I	GRCGYC	3 cut(s)	24, 849, 959
HspAI	GCGC	4 cut(s)	323, 399, 628, 886
KpnI	GGTACC	1 cut(s)	698
KspAI	GTTAAC	1 cut(s)	2058
LguI	GCTCTTC	1 cut(s)	1374
LmnI	GCTCC	4 cut(s)	77, 1024, 1142, 1929
Lsp1109I	GCAGC	3 cut(s)	337, 453, 604
LweI	GCATC	5 cut(s)	412, 579, 1228, 1547, 1825
MaeI	CTAG	5 cut(s)	272, 308, 375, 782, 1604
MaeII	ACGT	5 cut(s)	24, 284, 550, 849, 1402
MaeIII	GTNAC	6 cut(s)	70, 181, 280, 748, 903, 1913
MbiI	CCGCTC	3 cut(s)	86, 337, 412
MflI	RGATCY	5 cut(s)	157, 1087, 1407, 1694, 2108
MhlI	GDGCHC	2 cut(s)	170, 1147
MlsI	TGGCCA	1 cut(s)	1509
MluNI	TGGCCA	1 cut(s)	1509
MlyI	GAGTC	3 cut(s)	231, 612, 1004
MmeI	TCCRAC	2 cut(s)	778, 1543
Mox20I	TGGCCA	1 cut(s)	1509
MscI	TGGCCA	1 cut(s)	1509
MseI	TTAA	6 cut(s)	572, 1128, 1217, 1701, 1982, 2057
MslI	CAYNNNNRTG	2 cut(s)	1257, 1356
Msp20I	TGGCCA	1 cut(s)	1509
MspI	CCGG	3 cut(s)	75, 1163, 1647
MspR9I	CCNGG	1 cut(s)	2028
Mva1269I	GAATGC	2 cut(s)	508, 1252
MvaI	CCWGG	1 cut(s)	2028
MwoI	GCNNNNNNNGC	6 cut(s)	57, 92, 334, 625, 932, 1013
NlaIV	GGNNCC	6 cut(s)	44, 79, 267, 696, 1590, 2025
NmeAIII	GCCGAG	1 cut(s)	433
NmuCI	GTSAC	2 cut(s)	70, 748
NspI	RCATGY	4 cut(s)	431, 448, 1359, 2002
NspV	TTCGAA	1 cut(s)	388
PaeI	GCATGC	2 cut(s)	448, 2002
PagI	TCATGA	1 cut(s)	1969
PciI	ACATGT	2 cut(s)	427, 1355
PciSI	GCTCTTC	1 cut(s)	1374
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PctI	GAATGC	2 cut(s)	508, 1252
PfeI	GAWTC	3 cut(s)	114, 562, 1904
PflFI	GACNNNGTC	1 cut(s)	221
PkrI	GCNGC	7 cut(s)	20, 82, 85, 327, 443, 594, 775
PleI	GAGTC	3 cut(s)	230, 611, 1004
PpsI	GAGTC	3 cut(s)	230, 611, 1004
Ppu21I	YACGTR	1 cut(s)	285
PscI	ACATGT	2 cut(s)	427, 1355
Psp124BI	GAGCTC	1 cut(s)	1147
Psp6I	CCWGG	1 cut(s)	2026
PspEI	GGTNACC	1 cut(s)	748
PspFI	CCCAGC	1 cut(s)	689
PspGI	CCWGG	1 cut(s)	2026
PspN4I	GGNNCC	6 cut(s)	44, 79, 267, 696, 1590, 2025
PspPI	GGNCC	4 cut(s)	244, 877, 1516, 2023
PsrI	GAACNNNNNNTAC	2 cut(s)	1158, 1190
PstNI	CAGNNNCTG	1 cut(s)	1241
PsuI	RGATCY	5 cut(s)	157, 1087, 1407, 1694, 2108
PsyI	GACNNNGTC	1 cut(s)	221
RsaI	GTAC	5 cut(s)	461, 696, 780, 1157, 1328
RsaNI	GTAC	5 cut(s)	460, 695, 779, 1156, 1327
RseI	CAYNNNNRTG	2 cut(s)	1257, 1356
SacI	GAGCTC	1 cut(s)	1147
SapI	GCTCTTC	1 cut(s)	1374
SaqAI	TTAA	6 cut(s)	572, 1128, 1217, 1701, 1982, 2057
SatI	GCNGC	7 cut(s)	19, 81, 84, 326, 442, 593, 774
Sau96I	GGNCC	4 cut(s)	244, 877, 1516, 2023
ScaI	AGTACT	1 cut(s)	1157
SchI	GAGTC	3 cut(s)	231, 612, 1004
ScrFI	CCNGG	1 cut(s)	2028
SduI	GDGCHC	2 cut(s)	170, 1147
SfaNI	GCATC	5 cut(s)	412, 579, 1228, 1547, 1825
SfuI	TTCGAA	1 cut(s)	388
SinI	GGWCC	3 cut(s)	244, 877, 1516
SmiMI	CAYNNNNRTG	2 cut(s)	1257, 1356
SmlI	CTYRAG	4 cut(s)	525, 710, 1148, 2088
SmoI	CTYRAG	4 cut(s)	525, 710, 1148, 2088
SnaBI	TACGTA	1 cut(s)	285
SpeI	ACTAGT	1 cut(s)	374
SphI	GCATGC	2 cut(s)	448, 2002
SspMI	CTAG	5 cut(s)	272, 308, 375, 782, 1604
SstI	GAGCTC	1 cut(s)	1147
StyD4I	CCNGG	1 cut(s)	2026
StyI	CCWWGG	1 cut(s)	1826
TaaI	ACNGT	5 cut(s)	464, 656, 1302, 1878, 2105
TaiI	ACGT	5 cut(s)	27, 287, 553, 852, 1405
TaqI	TCGA	6 cut(s)	170, 178, 388, 1320, 1764, 2100
TaqII	GACCGA	2 cut(s)	234, 1442
TatI	WGTACW	2 cut(s)	1155, 1326
TauI	GCSGC	4 cut(s)	21, 83, 86, 776
TfiI	GAWTC	3 cut(s)	114, 562, 1904
Tru1I	TTAA	6 cut(s)	572, 1128, 1217, 1701, 1982, 2057
Tru9I	TTAA	6 cut(s)	572, 1128, 1217, 1701, 1982, 2057
TscAI	CASTG	3 cut(s)	679, 828, 1857
TseFI	GTSAC	2 cut(s)	70, 748
TseI	GCWGC	3 cut(s)	325, 441, 592
Tsp45I	GTSAC	2 cut(s)	70, 748
TspDTI	ATGAA	7 cut(s)	305, 1635, 1698, 1751, 1811, 1917, 1958
TspGWI	ACGGA	1 cut(s)	20
TspRI	CASTG	3 cut(s)	679, 828, 1857
Tth111I	GACNNNGTC	1 cut(s)	221
VpaK11BI	GGWCC	3 cut(s)	244, 877, 1516
XapI	RAATTY	1 cut(s)	1746
XceI	RCATGY	4 cut(s)	431, 448, 1359, 2002
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1208
XmiI	GTMKAC	1 cut(s)	371
XspI	CTAG	5 cut(s)	272, 308, 375, 782, 1604
ZraI	GACGTC	2 cut(s)	25, 850
ZrmI	AGTACT	1 cut(s)	1157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.