Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g15940 |
| malus_domestica | MD02G1167400.v1.1 MD05G1214500.v1.1 MD05G1214600.v1.1 MD05G1216500.v1.1 MD05G1217200.v1.1 MD10G1199000.v1.1 |
| prunus_persica | Prupe.4G142900_v2.0.a1 |
| pyrus_communis | pycom05g19880 pycom05g19900 pycom10g17150 |
| rosa_chinensis | RchiOBHm_Chr2g0110371 RchiOBHm_Chr5g0026861 |
| rosa_laevigata | RLG00000006394 RLG00000024474 RLG00000027454 RLG00000032965 RLG00000034129 |
| rosa_multiflora | Rmu_co8025774.1_g000001 Rmu_sc0012328.1_g000003 Rmu_ssc0000172.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00052620 Rroxscaffold_1G00052640 |
| rosa_rugosa | Rorug05G0430800 |
| rosa_samantha | Rh1BG148800 Rh1DG180700 Rh2CG220800 Rh5AG488400 Rh5BG186400 Rh5CG205600 Rh7CG473500 Rh7DG442800 |
| rosa_wichuraiana | Rw5G017180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 20 |
| AclWI | GGATC | 2 cut(s) | 91, 145 |
| AcsI | RAATTY | 1 cut(s) | 130 |
| AgsI | TTSAA | 1 cut(s) | 130 |
| AjnI | CCWGG | 1 cut(s) | 24 |
| AlwI | GGATC | 2 cut(s) | 91, 145 |
| ApoI | RAATTY | 1 cut(s) | 130 |
| BccI | CCATC | 1 cut(s) | 46 |
| BciT130I | CCWGG | 1 cut(s) | 26 |
| BfuAI | ACCTGC | 1 cut(s) | 20 |
| Bme1390I | CCNGG | 1 cut(s) | 26 |
| BmrFI | CCNGG | 1 cut(s) | 26 |
| BsaJI | CCNNGG | 1 cut(s) | 24 |
| BseBI | CCWGG | 1 cut(s) | 26 |
| BseDI | CCNNGG | 1 cut(s) | 24 |
| BseMII | CTCAG | 1 cut(s) | 105 |
| Bsp143I | GATC | 2 cut(s) | 96, 137 |
| BspCNI | CTCAG | 1 cut(s) | 106 |
| BspHI | TCATGA | 1 cut(s) | 160 |
| BspMI | ACCTGC | 1 cut(s) | 20 |
| BspPI | GGATC | 2 cut(s) | 91, 145 |
| BssECI | CCNNGG | 1 cut(s) | 24 |
| BssMI | GATC | 2 cut(s) | 96, 137 |
| Bst2UI | CCWGG | 1 cut(s) | 26 |
| Bst4CI | ACNGT | 1 cut(s) | 88 |
| BstC8I | GCNNGC | 2 cut(s) | 105, 109 |
| BstDEI | CTNAG | 1 cut(s) | 114 |
| BstKTI | GATC | 2 cut(s) | 99, 140 |
| BstMBI | GATC | 2 cut(s) | 96, 137 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 26 |
| BstNI | CCWGG | 1 cut(s) | 26 |
| BstNSI | RCATGY | 1 cut(s) | 107 |
| BstSCI | CCNGG | 1 cut(s) | 24 |
| BtsI | GCAGTG | 1 cut(s) | 87 |
| BtsIMutI | CAGTG | 1 cut(s) | 87 |
| BveI | ACCTGC | 1 cut(s) | 20 |
| Cac8I | GCNNGC | 2 cut(s) | 105, 109 |
| CciI | TCATGA | 1 cut(s) | 160 |
| CviAII | CATG | 2 cut(s) | 104, 161 |
| CviJI | RGCY | 1 cut(s) | 20 |
| CviKI_1 | RGCY | 1 cut(s) | 20 |
| DdeI | CTNAG | 1 cut(s) | 114 |
| DpnI | GATC | 2 cut(s) | 98, 139 |
| DpnII | GATC | 2 cut(s) | 96, 137 |
| EcoRI | GAATTC | 1 cut(s) | 130 |
| EcoRII | CCWGG | 1 cut(s) | 24 |
| FaeI | CATG | 2 cut(s) | 107, 164 |
| FaiI | YATR | 2 cut(s) | 105, 162 |
| FatI | CATG | 2 cut(s) | 103, 160 |
| Hin1II | CATG | 2 cut(s) | 107, 164 |
| HinfI | GANTC | 1 cut(s) | 116 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy188III | TCNNGA | 3 cut(s) | 135, 152, 161 |
| HpyCH4III | ACNGT | 1 cut(s) | 88 |
| HpyCH4V | TGCA | 2 cut(s) | 80, 103 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 26 |
| HpyF3I | CTNAG | 1 cut(s) | 114 |
| Hsp92II | CATG | 2 cut(s) | 107, 164 |
| Kzo9I | GATC | 2 cut(s) | 96, 137 |
| LpnPI | CCDG | 4 cut(s) | 11, 15, 38, 113 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 2 cut(s) | 98, 139 |
| MboI | GATC | 2 cut(s) | 96, 137 |
| MluCI | AATT | 3 cut(s) | 130, 141, 168 |
| MlyI | GAGTC | 1 cut(s) | 125 |
| MnlI | CCTC | 1 cut(s) | 114 |
| MslI | CAYNNNNRTG | 1 cut(s) | 153 |
| MspR9I | CCNGG | 1 cut(s) | 26 |
| MvaI | CCWGG | 1 cut(s) | 26 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 26 |
| NdeII | GATC | 2 cut(s) | 96, 137 |
| NlaIII | CATG | 2 cut(s) | 107, 164 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| NspI | RCATGY | 1 cut(s) | 107 |
| PaeI | GCATGC | 1 cut(s) | 107 |
| PagI | TCATGA | 1 cut(s) | 160 |
| PleI | GAGTC | 1 cut(s) | 124 |
| PpsI | GAGTC | 1 cut(s) | 124 |
| Psp6I | CCWGG | 1 cut(s) | 24 |
| PspGI | CCWGG | 1 cut(s) | 24 |
| RseI | CAYNNNNRTG | 1 cut(s) | 153 |
| Sau3AI | GATC | 2 cut(s) | 96, 137 |
| SchI | GAGTC | 1 cut(s) | 125 |
| ScrFI | CCNGG | 1 cut(s) | 26 |
| SetI | ASST | 1 cut(s) | 34 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 153 |
| SphI | GCATGC | 1 cut(s) | 107 |
| Sse9I | AATT | 3 cut(s) | 130, 141, 168 |
| StyD4I | CCNGG | 1 cut(s) | 24 |
| TaaI | ACNGT | 1 cut(s) | 88 |
| TaqI | TCGA | 2 cut(s) | 119, 151 |
| TasI | AATT | 3 cut(s) | 130, 141, 168 |
| TscAI | CASTG | 1 cut(s) | 87 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 2 cut(s) | 134, 149 |
| TspRI | CASTG | 1 cut(s) | 87 |
| XapI | RAATTY | 1 cut(s) | 130 |
| XceI | RCATGY | 1 cut(s) | 107 |