Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g15940 |
| malus_domestica | MD02G1167400.v1.1 MD05G1214500.v1.1 MD05G1214600.v1.1 MD05G1216500.v1.1 MD05G1217200.v1.1 MD10G1199000.v1.1 |
| prunus_persica | Prupe.4G142900_v2.0.a1 |
| pyrus_communis | pycom05g19880 pycom05g19900 pycom10g17150 |
| rosa_chinensis | RchiOBHm_Chr2g0110371 RchiOBHm_Chr5g0026861 |
| rosa_laevigata | RLG00000006394 RLG00000024474 RLG00000027454 RLG00000032965 RLG00000034129 |
| rosa_multiflora | Rmu_co8025774.1_g000001 Rmu_sc0012328.1_g000003 Rmu_ssc0000172.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00052620 Rroxscaffold_1G00052640 |
| rosa_rugosa | Rorug05G0430800 |
| rosa_samantha | Rh1BG148800 Rh1DG180700 Rh2CG220800 Rh5AG488400 Rh5BG186400 Rh5CG205600 Rh7CG473500 Rh7DG442800 |
| rosa_wichuraiana | Rw5G017180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 274 |
| AgeI | ACCGGT | 1 cut(s) | 294 |
| AgsI | TTSAA | 2 cut(s) | 217, 245 |
| AjiI | CACGTC | 1 cut(s) | 53 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 209, 241 |
| AluBI | AGCT | 3 cut(s) | 71, 98, 181 |
| AluI | AGCT | 3 cut(s) | 71, 98, 181 |
| Alw26I | GTCTC | 1 cut(s) | 43 |
| AoxI | GGCC | 1 cut(s) | 141 |
| AsiGI | ACCGGT | 1 cut(s) | 294 |
| AspS9I | GGNCC | 1 cut(s) | 142 |
| BccI | CCATC | 1 cut(s) | 262 |
| BcoDI | GTCTC | 1 cut(s) | 43 |
| BmgBI | CACGTC | 1 cut(s) | 53 |
| BmgT120I | GGNCC | 1 cut(s) | 142 |
| BpuEI | CTTGAG | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 2 cut(s) | 138, 237 |
| BsaWI | WCCGGW | 1 cut(s) | 294 |
| Bse118I | RCCGGY | 1 cut(s) | 294 |
| Bse3DI | GCAATG | 3 cut(s) | 105, 219, 238 |
| BseDI | CCNNGG | 2 cut(s) | 138, 237 |
| BseMI | GCAATG | 3 cut(s) | 105, 219, 238 |
| BseMII | CTCAG | 3 cut(s) | 53, 106, 178 |
| BshFI | GGCC | 1 cut(s) | 143 |
| BshTI | ACCGGT | 1 cut(s) | 294 |
| BsiSI | CCGG | 1 cut(s) | 295 |
| BsmAI | GTCTC | 1 cut(s) | 43 |
| BsmBI | CGTCTC | 1 cut(s) | 43 |
| BsnI | GGCC | 1 cut(s) | 143 |
| Bsp19I | CCATGG | 1 cut(s) | 237 |
| BspACI | CCGC | 1 cut(s) | 274 |
| BspANI | GGCC | 1 cut(s) | 143 |
| BspCNI | CTCAG | 3 cut(s) | 54, 105, 177 |
| BspHI | TCATGA | 1 cut(s) | 184 |
| BsrDI | GCAATG | 3 cut(s) | 105, 219, 238 |
| BsrFI | RCCGGY | 1 cut(s) | 294 |
| BssAI | RCCGGY | 1 cut(s) | 294 |
| BssECI | CCNNGG | 2 cut(s) | 138, 237 |
| BssT1I | CCWWGG | 2 cut(s) | 138, 237 |
| BstDEI | CTNAG | 3 cut(s) | 62, 92, 164 |
| BstDSI | CCRYGG | 1 cut(s) | 237 |
| BstMAI | GTCTC | 1 cut(s) | 43 |
| BsuRI | GGCC | 1 cut(s) | 143 |
| BtgI | CCRYGG | 1 cut(s) | 237 |
| BtrI | CACGTC | 1 cut(s) | 53 |
| CciI | TCATGA | 1 cut(s) | 184 |
| Cfr10I | RCCGGY | 1 cut(s) | 294 |
| Cfr13I | GGNCC | 1 cut(s) | 142 |
| CspAI | ACCGGT | 1 cut(s) | 294 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 34, 69 |
| CviAII | CATG | 2 cut(s) | 185, 238 |
| CviJI | RGCY | 5 cut(s) | 58, 71, 98, 143, 181 |
| CviKI_1 | RGCY | 5 cut(s) | 58, 71, 98, 143, 181 |
| DdeI | CTNAG | 3 cut(s) | 62, 92, 164 |
| Eco130I | CCWWGG | 2 cut(s) | 138, 237 |
| EcoO109I | RGGNCCY | 1 cut(s) | 142 |
| EcoT14I | CCWWGG | 2 cut(s) | 138, 237 |
| ErhI | CCWWGG | 2 cut(s) | 138, 237 |
| Esp3I | CGTCTC | 1 cut(s) | 43 |
| FaeI | CATG | 2 cut(s) | 188, 241 |
| FaiI | YATR | 6 cut(s) | 74, 148, 150, 186, 239, 263 |
| FatI | CATG | 2 cut(s) | 184, 237 |
| FauI | CCCGC | 1 cut(s) | 267 |
| HaeIII | GGCC | 1 cut(s) | 143 |
| HapII | CCGG | 1 cut(s) | 295 |
| Hin1II | CATG | 2 cut(s) | 188, 241 |
| HinfI | GANTC | 1 cut(s) | 4 |
| HpaII | CCGG | 1 cut(s) | 295 |
| Hpy188I | TCNGA | 2 cut(s) | 95, 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 46, 185 |
| HpyAV | CCTTC | 2 cut(s) | 11, 38 |
| HpyCH4IV | ACGT | 1 cut(s) | 52 |
| HpyCH4V | TGCA | 1 cut(s) | 25 |
| HpyF3I | CTNAG | 3 cut(s) | 62, 92, 164 |
| HpySE526I | ACGT | 1 cut(s) | 52 |
| Hsp92II | CATG | 2 cut(s) | 188, 241 |
| LmnI | GCTCC | 1 cut(s) | 115 |
| MaeII | ACGT | 1 cut(s) | 52 |
| MboII | GAAGA | 1 cut(s) | 113 |
| MluCI | AATT | 1 cut(s) | 195 |
| MnlI | CCTC | 3 cut(s) | 57, 89, 184 |
| MseI | TTAA | 1 cut(s) | 288 |
| MspI | CCGG | 1 cut(s) | 295 |
| NcoI | CCATGG | 1 cut(s) | 237 |
| NlaIII | CATG | 2 cut(s) | 188, 241 |
| PagI | TCATGA | 1 cut(s) | 184 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PinAI | ACCGGT | 1 cut(s) | 294 |
| PspPI | GGNCC | 1 cut(s) | 142 |
| SaqAI | TTAA | 1 cut(s) | 288 |
| Sau96I | GGNCC | 1 cut(s) | 142 |
| SetI | ASST | 6 cut(s) | 30, 55, 73, 81, 100, 183 |
| SgeI | CNNG | 9 cut(s) | 22, 58, 65, 111, 151, 197, 202, 250, 287 |
| SmlI | CTYRAG | 1 cut(s) | 44 |
| SmoI | CTYRAG | 1 cut(s) | 44 |
| Sse9I | AATT | 1 cut(s) | 195 |
| SsiI | CCGC | 1 cut(s) | 274 |
| StyI | CCWWGG | 2 cut(s) | 138, 237 |
| TaiI | ACGT | 1 cut(s) | 55 |
| TaqI | TCGA | 1 cut(s) | 284 |
| TasI | AATT | 1 cut(s) | 195 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| Tru1I | TTAA | 1 cut(s) | 288 |
| Tru9I | TTAA | 1 cut(s) | 288 |
| TspDTI | ATGAA | 3 cut(s) | 17, 173, 200 |