Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g15940 |
| malus_domestica | MD02G1167400.v1.1 MD05G1214500.v1.1 MD05G1214600.v1.1 MD05G1216500.v1.1 MD05G1217200.v1.1 MD10G1199000.v1.1 |
| prunus_persica | Prupe.4G142900_v2.0.a1 |
| pyrus_communis | pycom05g19880 pycom05g19900 pycom10g17150 |
| rosa_chinensis | RchiOBHm_Chr2g0110371 RchiOBHm_Chr5g0026861 |
| rosa_laevigata | RLG00000006394 RLG00000024474 RLG00000027454 RLG00000032965 RLG00000034129 |
| rosa_multiflora | Rmu_co8025774.1_g000001 Rmu_sc0012328.1_g000003 Rmu_ssc0000172.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00052620 Rroxscaffold_1G00052640 |
| rosa_rugosa | Rorug05G0430800 |
| rosa_samantha | Rh1BG148800 Rh1DG180700 Rh2CG220800 Rh5AG488400 Rh5BG186400 Rh5CG205600 Rh7CG473500 Rh7DG442800 |
| rosa_wichuraiana | Rw5G017180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 155 |
| AflIII | ACRYGT | 1 cut(s) | 338 |
| AgsI | TTSAA | 1 cut(s) | 251 |
| AjiI | CACGTC | 1 cut(s) | 56 |
| AluBI | AGCT | 2 cut(s) | 74, 187 |
| AluI | AGCT | 2 cut(s) | 74, 187 |
| Alw26I | GTCTC | 1 cut(s) | 46 |
| BccI | CCATC | 1 cut(s) | 268 |
| BcoDI | GTCTC | 1 cut(s) | 46 |
| BglII | AGATCT | 1 cut(s) | 98 |
| BmgBI | CACGTC | 1 cut(s) | 56 |
| BmsI | GCATC | 1 cut(s) | 300 |
| Bpu10I | CCTNAGC | 1 cut(s) | 65 |
| BpuEI | CTTGAG | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 2 cut(s) | 144, 243 |
| Bse3DI | GCAATG | 1 cut(s) | 244 |
| BseDI | CCNNGG | 2 cut(s) | 144, 243 |
| BseGI | GGATG | 1 cut(s) | 328 |
| BseMI | GCAATG | 1 cut(s) | 244 |
| BseMII | CTCAG | 3 cut(s) | 79, 109, 184 |
| BsmAI | GTCTC | 1 cut(s) | 46 |
| BsmBI | CGTCTC | 1 cut(s) | 46 |
| Bsp143I | GATC | 1 cut(s) | 98 |
| Bsp19I | CCATGG | 1 cut(s) | 243 |
| BspACI | CCGC | 1 cut(s) | 155 |
| BspCNI | CTCAG | 3 cut(s) | 78, 108, 183 |
| BspHI | TCATGA | 1 cut(s) | 190 |
| BsrDI | GCAATG | 1 cut(s) | 244 |
| BssECI | CCNNGG | 2 cut(s) | 144, 243 |
| BssMI | GATC | 1 cut(s) | 98 |
| BssT1I | CCWWGG | 2 cut(s) | 144, 243 |
| BstDEI | CTNAG | 3 cut(s) | 65, 95, 170 |
| BstDSI | CCRYGG | 1 cut(s) | 243 |
| BstF5I | GGATG | 1 cut(s) | 328 |
| BstKTI | GATC | 1 cut(s) | 101 |
| BstMAI | GTCTC | 1 cut(s) | 46 |
| BstMBI | GATC | 1 cut(s) | 98 |
| BstNSI | RCATGY | 1 cut(s) | 342 |
| BstX2I | RGATCY | 1 cut(s) | 98 |
| BstYI | RGATCY | 1 cut(s) | 98 |
| BtgI | CCRYGG | 1 cut(s) | 243 |
| BtrI | CACGTC | 1 cut(s) | 56 |
| BtsCI | GGATG | 1 cut(s) | 328 |
| CciI | TCATGA | 1 cut(s) | 190 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 37, 72 |
| CviAII | CATG | 3 cut(s) | 191, 244, 339 |
| CviJI | RGCY | 3 cut(s) | 74, 149, 187 |
| CviKI_1 | RGCY | 3 cut(s) | 74, 149, 187 |
| DdeI | CTNAG | 3 cut(s) | 65, 95, 170 |
| DpnI | GATC | 1 cut(s) | 100 |
| DpnII | GATC | 1 cut(s) | 98 |
| Eco130I | CCWWGG | 2 cut(s) | 144, 243 |
| EcoT14I | CCWWGG | 2 cut(s) | 144, 243 |
| ErhI | CCWWGG | 2 cut(s) | 144, 243 |
| Esp3I | CGTCTC | 1 cut(s) | 46 |
| FaeI | CATG | 3 cut(s) | 194, 247, 342 |
| FaiI | YATR | 6 cut(s) | 77, 192, 245, 269, 340, 357 |
| FatI | CATG | 3 cut(s) | 190, 243, 338 |
| FokI | GGATG | 1 cut(s) | 335 |
| Hin1II | CATG | 3 cut(s) | 194, 247, 342 |
| HinfI | GANTC | 1 cut(s) | 7 |
| Hpy188I | TCNGA | 3 cut(s) | 98, 105, 173 |
| Hpy188III | TCNNGA | 3 cut(s) | 49, 116, 191 |
| HpyAV | CCTTC | 3 cut(s) | 14, 41, 313 |
| HpyCH4IV | ACGT | 1 cut(s) | 55 |
| HpyF3I | CTNAG | 3 cut(s) | 65, 95, 170 |
| HpySE526I | ACGT | 1 cut(s) | 55 |
| Hsp92II | CATG | 3 cut(s) | 194, 247, 342 |
| Kzo9I | GATC | 1 cut(s) | 98 |
| LmnI | GCTCC | 2 cut(s) | 33, 118 |
| LpnPI | CCDG | 3 cut(s) | 52, 129, 243 |
| LweI | GCATC | 1 cut(s) | 300 |
| MaeII | ACGT | 1 cut(s) | 55 |
| MalI | GATC | 1 cut(s) | 100 |
| MboI | GATC | 1 cut(s) | 98 |
| MboII | GAAGA | 1 cut(s) | 116 |
| MflI | RGATCY | 1 cut(s) | 98 |
| MluCI | AATT | 1 cut(s) | 201 |
| MnlI | CCTC | 2 cut(s) | 92, 190 |
| MslI | CAYNNNNRTG | 1 cut(s) | 343 |
| NcoI | CCATGG | 1 cut(s) | 243 |
| NdeII | GATC | 1 cut(s) | 98 |
| NlaIII | CATG | 3 cut(s) | 194, 247, 342 |
| NspI | RCATGY | 1 cut(s) | 342 |
| PagI | TCATGA | 1 cut(s) | 190 |
| PciI | ACATGT | 1 cut(s) | 338 |
| PfeI | GAWTC | 1 cut(s) | 7 |
| PscI | ACATGT | 1 cut(s) | 338 |
| PsuI | RGATCY | 1 cut(s) | 98 |
| RseI | CAYNNNNRTG | 1 cut(s) | 343 |
| Sau3AI | GATC | 1 cut(s) | 98 |
| SetI | ASST | 4 cut(s) | 58, 76, 84, 189 |
| SfaNI | GCATC | 1 cut(s) | 300 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 343 |
| SmlI | CTYRAG | 1 cut(s) | 47 |
| SmoI | CTYRAG | 1 cut(s) | 47 |
| Sse9I | AATT | 1 cut(s) | 201 |
| SsiI | CCGC | 1 cut(s) | 155 |
| StyI | CCWWGG | 2 cut(s) | 144, 243 |
| TaiI | ACGT | 1 cut(s) | 58 |
| TaqI | TCGA | 1 cut(s) | 300 |
| TasI | AATT | 1 cut(s) | 201 |
| TfiI | GAWTC | 1 cut(s) | 7 |
| TspDTI | ATGAA | 4 cut(s) | 20, 179, 206, 318 |
| XceI | RCATGY | 1 cut(s) | 342 |