RchiOBHm_Chr2g0120141

carboxylesterase 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0003700
Physical Location & Seq
Forward (+)
32862500 .. 32863175
676 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 315 bp
ATGGCCCTCGACCAAGATGCCGCCGAAGGCAACCCCTCCTCCTCCCCCCAAGACAACGTCTTTGGCGACTATGACGATGACGATGACGATGACGACGTCGACGACTCTGCCTCTCCTTTCTCCACCTTCGATGGCGTCACCTCCCGACCCGAAGAAGCCATCGCCGCCGCCAATCCCTTATTTGCGGACGATGTCGCCACCAAGGACATCCACATCGATCTTTTCACTTCTCTATCTATTCGAATCTTCCTCTCCGAGTTTGCTCTCAACCACCGGAGCCCTCCGATAAACCTAGGGTTTGACAGCCCGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

104

Amino Acids

11.22

Weight (kDa)

4.05

Isoelectric Point (pI)

67.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 99
AccI GTMKAC 1 cut(s) 99
AciI CCGC 4 cut(s) 21, 165, 168, 185
AcyI GRCGYC 2 cut(s) 96, 135
AoxI GGCC 1 cut(s) 3
ArsI GACNNNNNNTTYG 2 cut(s) 44, 76
AspA2I CCTAGG 1 cut(s) 292
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 130
AsuII TTCGAA 1 cut(s) 241
AvrII CCTAGG 1 cut(s) 292
BanII GRGCYC 1 cut(s) 281
BccI CCATC 2 cut(s) 125, 167
BcgI CGANNNNNNTGC 3 cut(s) 33, 89, 123
BfaI CTAG 1 cut(s) 293
BisI GCNGC 3 cut(s) 21, 165, 168
BlnI CCTAGG 1 cut(s) 292
BlsI GCNGC 3 cut(s) 22, 166, 169
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 278
BmsI GCATC 1 cut(s) 7
Bpu14I TTCGAA 1 cut(s) 241
Bsa29I ATCGAT 1 cut(s) 216
BsaHI GRCGYC 2 cut(s) 96, 135
BsaJI CCNNGG 2 cut(s) 201, 292
BsaWI WCCGGW 1 cut(s) 273
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
BseCI ATCGAT 1 cut(s) 216
BseDI CCNNGG 2 cut(s) 201, 292
BseGI GGATG 1 cut(s) 207
BseRI GAGGAG 2 cut(s) 28, 31
BshFI GGCC 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 216
BsiSI CCGG 1 cut(s) 274
BsnI GGCC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 241
Bsp1286I GDGCHC 1 cut(s) 281
Bsp143I GATC 2 cut(s) 217, 309
BspACI CCGC 4 cut(s) 21, 165, 168, 185
BspANI GGCC 1 cut(s) 5
BspDI ATCGAT 1 cut(s) 216
BspLI GGNNCC 1 cut(s) 278
BspT104I TTCGAA 1 cut(s) 241
BssECI CCNNGG 2 cut(s) 201, 292
BssMI GATC 2 cut(s) 217, 309
BssNI GRCGYC 2 cut(s) 96, 135
BssT1I CCWWGG 2 cut(s) 201, 292
BstACI GRCGYC 2 cut(s) 96, 135
BstBI TTCGAA 1 cut(s) 241
BstF5I GGATG 1 cut(s) 207
BstKTI GATC 2 cut(s) 220, 312
BstMBI GATC 2 cut(s) 217, 309
BstMWI GCNNNNNNNGC 1 cut(s) 164
Bsu15I ATCGAT 1 cut(s) 216
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 216
BtgZI GCGATG 1 cut(s) 145
BtsCI GGATG 1 cut(s) 207
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 216
CseI GACGC 1 cut(s) 124
CviJI RGCY 4 cut(s) 5, 158, 279, 306
CviKI_1 RGCY 4 cut(s) 5, 158, 279, 306
DpnI GATC 2 cut(s) 219, 311
DpnII GATC 2 cut(s) 217, 309
Eco130I CCWWGG 2 cut(s) 201, 292
Eco24I GRGCYC 1 cut(s) 281
EcoT14I CCWWGG 2 cut(s) 201, 292
EcoT38I GRGCYC 1 cut(s) 281
ErhI CCWWGG 2 cut(s) 201, 292
FaiI YATR 1 cut(s) 72
FblI GTMKAC 1 cut(s) 99
Fnu4HI GCNGC 3 cut(s) 21, 165, 168
FokI GGATG 1 cut(s) 194
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 3 cut(s) 21, 165, 168
FspBI CTAG 1 cut(s) 293
GluI GCNGC 3 cut(s) 21, 165, 168
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 274
HgaI GACGC 1 cut(s) 124
Hin1I GRCGYC 2 cut(s) 96, 135
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HinfI GANTC 2 cut(s) 104, 243
HpaII CCGG 1 cut(s) 274
HphI GGTGA 1 cut(s) 130
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 3 cut(s) 256, 285, 314
Hpy188III TCNNGA 1 cut(s) 144
Hpy8I GTNNAC 1 cut(s) 100
Hpy99I CGWCG 3 cut(s) 98, 101, 104
HpyAV CCTTC 2 cut(s) 20, 136
HpyCH4IV ACGT 2 cut(s) 57, 96
HpyF10VI GCNNNNNNNGC 1 cut(s) 164
HpySE526I ACGT 2 cut(s) 57, 96
Hsp92I GRCGYC 2 cut(s) 96, 135
Kzo9I GATC 2 cut(s) 217, 309
LmnI GCTCC 1 cut(s) 276
LpnPI CCDG 1 cut(s) 287
LweI GCATC 1 cut(s) 7
MaeI CTAG 1 cut(s) 293
MaeII ACGT 2 cut(s) 57, 96
MaeIII GTNAC 1 cut(s) 136
MalI GATC 2 cut(s) 219, 311
MboI GATC 2 cut(s) 217, 309
MboII GAAGA 2 cut(s) 164, 238
MhlI GDGCHC 1 cut(s) 281
MlyI GAGTC 1 cut(s) 98
MnlI CCTC 8 cut(s) 17, 46, 49, 52, 121, 151, 260, 291
MspI CCGG 1 cut(s) 274
MwoI GCNNNNNNNGC 1 cut(s) 164
NdeII GATC 2 cut(s) 217, 309
NlaIV GGNNCC 1 cut(s) 278
NmuCI GTSAC 1 cut(s) 136
NspV TTCGAA 1 cut(s) 241
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 93, 99
PfeI GAWTC 1 cut(s) 243
PflFI GACNNNGTC 3 cut(s) 56, 95, 191
PkrI GCNGC 3 cut(s) 22, 166, 169
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
PspN4I GGNNCC 1 cut(s) 278
PspPI GGNCC 1 cut(s) 4
PsyI GACNNNGTC 3 cut(s) 56, 95, 191
SalI GTCGAC 1 cut(s) 98
SatI GCNGC 3 cut(s) 21, 165, 168
Sau3AI GATC 2 cut(s) 217, 309
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 1 cut(s) 98
SduI GDGCHC 1 cut(s) 281
SetI ASST 5 cut(s) 60, 99, 128, 143, 294
SfaNI GCATC 1 cut(s) 7
SfuI TTCGAA 1 cut(s) 241
SgeI CNNG 9 cut(s) 20, 26, 62, 156, 161, 214, 268, 286, 305
SgrDI CGTCGACG 1 cut(s) 98
SsiI CCGC 4 cut(s) 21, 165, 168, 185
SspMI CTAG 1 cut(s) 293
StyI CCWWGG 2 cut(s) 201, 292
TaiI ACGT 2 cut(s) 60, 99
TaqI TCGA 5 cut(s) 9, 99, 129, 216, 241
TauI GCSGC 3 cut(s) 23, 167, 170
TfiI GAWTC 1 cut(s) 243
TseFI GTSAC 1 cut(s) 136
Tsp45I GTSAC 1 cut(s) 136
Tth111I GACNNNGTC 3 cut(s) 56, 95, 191
XmaJI CCTAGG 1 cut(s) 292
XmiI GTMKAC 1 cut(s) 99
XspI CTAG 1 cut(s) 293
ZraI GACGTC 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.