Rmu_sc0000147.1_g000060

carboxylesterase 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000147.1
OG0003700
Physical Location & Seq
Reverse (-)
268633 .. 272482
3850 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000147.1_g000060.1.cds

Sequence Viewer

Length: 1056 bp
atggcccctgaccaagacgactccgaaggcgacctctcctcctccccccaagacgatgtcattgacgaggatgtggaagactccgcctctcctttctccacctccgatggtgtcacctcccgactcgaagaaaccatcgcagccgccaatcccttgttcgacgacagcgtcgccaccaaggacatccacatctatccttttacttctctatctattcgaaccttcctccccgaatccactctcaacctgctagagccctctagtaaatctaggccgttccatccctccaaccgcaacagctgctgcaacgcggttgtggcgaatacattgagagctgagctgaggaggaacagctacggcttcagcaacttcgtcgaggggttgaatttgatggctggagtaggctctagggtttacagagcatactcgctggggcggacgaagcaagagattataaccacttattcgattaagttcgaatacgagaagccaacaagtccaccagttatacgaaatctagagtttcgtccccgatctcctcctccccaatgctctgtttggtacctagtggcttttgaagacgggttgaattggttggagaagcaggctgatgttgctgtaatgtggtttgcattgcttgcggtcaacgttttagagtttattagaactcttcctctcctcatcgccgacgtctttctgaggtcagatcgtccagccggcaactcaggaaaaggaattgaagtcggaaagctttgtgttttcgacgaatttcgttgggatgaagaagaagatgaagaaagcaagaggaagaagaagagattgagtgaagggacgagaatacccctcaaagtttgccacatggctaacgccgtaacggccaacagtgttttagggaggggggtgaatggagagcagctaggtttgctcggctccagcctctgcttactttctcgggttagtgttgggatggtagtggggaatgctcttcagcttgctaatttgccttatgcggtgaaggaagggtgtagatctgggatcagcattggcttgttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

351

Amino Acids

38.68

Weight (kDa)

5.1

Isoelectric Point (pI)

56.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 455
AasI GACNNNNNNGTC 1 cut(s) 167
AatII GACGTC 1 cut(s) 693
Acc36I ACCTGC 1 cut(s) 255
Acc65I GGTACC 1 cut(s) 561
AccB1I GGYRCC 1 cut(s) 561
AccII CGCG 1 cut(s) 311
AciI CCGC 7 cut(s) 84, 144, 292, 311, 436, 641, 1010
AclI AACGTT 1 cut(s) 648
AclWI GGATC 1 cut(s) 1043
AcoI YGGCCR 1 cut(s) 876
AcsI RAATTY 2 cut(s) 385, 767
AcuI CTGAAG 2 cut(s) 346, 971
AcyI GRCGYC 1 cut(s) 690
AfaI GTAC 1 cut(s) 563
AgsI TTSAA 4 cut(s) 385, 578, 589, 740
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
AluBI AGCT 7 cut(s) 300, 335, 340, 354, 751, 916, 991
AluI AGCT 7 cut(s) 300, 335, 340, 354, 751, 916, 991
AlwI GGATC 1 cut(s) 1043
AlwNI CAGNNNCTG 2 cut(s) 303, 939
Ama87I CYCGRG 1 cut(s) 951
AoxI GGCC 3 cut(s) 3, 272, 876
ApeKI GCWGC 4 cut(s) 140, 300, 303, 913
ApoI RAATTY 2 cut(s) 385, 767
Asp718I GGTACC 1 cut(s) 561
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 3 cut(s) 106, 913, 1024
AsuII TTCGAA 2 cut(s) 217, 477
AvaI CYCGRG 1 cut(s) 951
BanI GGYRCC 1 cut(s) 561
BanII GRGCYC 1 cut(s) 258
BbsI GAAGAC 2 cut(s) 84, 585
BbvCI CCTCAGC 1 cut(s) 341
BbvI GCAGC 4 cut(s) 152, 287, 290, 925
BccI CCATC 5 cut(s) 101, 143, 288, 385, 961
BceAI ACGGC 4 cut(s) 259, 373, 854, 891
BcgI CGANNNNNNTGC 2 cut(s) 355, 389
BfaI CTAG 7 cut(s) 251, 261, 270, 408, 518, 566, 917
BfuAI ACCTGC 1 cut(s) 255
BglI GCCNNNNNGGC 1 cut(s) 875
BglII AGATCT 1 cut(s) 1028
BisI GCNGC 5 cut(s) 141, 144, 301, 304, 914
BlpI GCTNAGC 1 cut(s) 336
BlsI GCNGC 5 cut(s) 142, 145, 302, 305, 915
BmeT110I CYCGRG 1 cut(s) 951
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 3 cut(s) 6, 563, 931
BpiI GAAGAC 2 cut(s) 84, 585
BpmI CTGGAG 2 cut(s) 417, 916
Bpu10I CCTNAGC 1 cut(s) 341
Bpu1102I GCTNAGC 1 cut(s) 336
Bpu14I TTCGAA 2 cut(s) 217, 477
BsaHI GRCGYC 1 cut(s) 690
BsaJI CCNNGG 1 cut(s) 177
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
Bse118I RCCGGY 1 cut(s) 716
Bse1I ACTGG 1 cut(s) 503
Bse3DI GCAATG 1 cut(s) 632
BseDI CCNNGG 1 cut(s) 177
BseGI GGATG 5 cut(s) 76, 183, 280, 784, 972
BseMI GCAATG 1 cut(s) 632
BseMII CTCAG 4 cut(s) 327, 332, 689, 738
BseNI ACTGG 1 cut(s) 503
BseRI GAGGAG 6 cut(s) 28, 31, 358, 528, 531, 668
BseXI GCAGC 4 cut(s) 152, 287, 290, 925
BseYI CCCAGC 1 cut(s) 430
Bsh1236I CGCG 1 cut(s) 311
BshFI GGCC 3 cut(s) 5, 274, 878
BshNI GGYRCC 1 cut(s) 561
BsiHKCI CYCGRG 1 cut(s) 951
BsiSI CCGG 1 cut(s) 717
BslFI GGGAC 2 cut(s) 513, 844
BsmFI GGGAC 2 cut(s) 513, 844
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 3 cut(s) 5, 274, 878
BsoBI CYCGRG 1 cut(s) 951
Bsp119I TTCGAA 2 cut(s) 217, 477
Bsp1286I GDGCHC 1 cut(s) 258
Bsp143I GATC 4 cut(s) 533, 706, 1028, 1035
Bsp1720I GCTNAGC 1 cut(s) 336
BspACI CCGC 7 cut(s) 84, 144, 292, 311, 436, 641, 1010
BspANI GGCC 3 cut(s) 5, 274, 878
BspCNI CTCAG 4 cut(s) 328, 333, 690, 737
BspFNI CGCG 1 cut(s) 311
BspLI GGNNCC 3 cut(s) 6, 563, 931
BspMI ACCTGC 1 cut(s) 255
BspPI GGATC 1 cut(s) 1043
BspQI GCTCTTC 1 cut(s) 990
BspT104I TTCGAA 2 cut(s) 217, 477
BspT107I GGYRCC 1 cut(s) 561
BsrDI GCAATG 1 cut(s) 632
BsrFI RCCGGY 1 cut(s) 716
BsrI ACTGG 1 cut(s) 503
BssAI RCCGGY 1 cut(s) 716
BssECI CCNNGG 1 cut(s) 177
BssMI GATC 4 cut(s) 533, 706, 1028, 1035
BssNI GRCGYC 1 cut(s) 690
BssT1I CCWWGG 1 cut(s) 177
Bst4CI ACNGT 1 cut(s) 884
Bst6I CTCTTC 3 cut(s) 675, 809, 990
BstACI GRCGYC 1 cut(s) 690
BstAPI GCANNNNNTGC 2 cut(s) 300, 638
BstBI TTCGAA 2 cut(s) 217, 477
BstC8I GCNNGC 4 cut(s) 606, 639, 718, 993
BstDEI CTNAG 4 cut(s) 336, 341, 698, 724
BstF5I GGATG 5 cut(s) 76, 183, 280, 784, 972
BstFNI CGCG 1 cut(s) 311
BstKTI GATC 4 cut(s) 536, 709, 1031, 1038
BstMBI GATC 4 cut(s) 533, 706, 1028, 1035
BstMWI GCNNNNNNNGC 7 cut(s) 300, 317, 442, 614, 638, 875, 922
BstUI CGCG 1 cut(s) 311
BstV1I GCAGC 4 cut(s) 152, 287, 290, 925
BstV2I GAAGAC 2 cut(s) 84, 585
BstX2I RGATCY 1 cut(s) 1028
BstYI RGATCY 1 cut(s) 1028
BsuRI GGCC 3 cut(s) 5, 274, 878
BtgZI GCGATG 2 cut(s) 121, 667
BtsCI GGATG 5 cut(s) 76, 183, 280, 784, 972
BtsIMutI CAGTG 1 cut(s) 889
BveI ACCTGC 1 cut(s) 255
Cac8I GCNNGC 4 cut(s) 606, 639, 718, 993
CaiI CAGNNNCTG 2 cut(s) 303, 939
Cfr10I RCCGGY 1 cut(s) 716
Cfr13I GGNCC 1 cut(s) 4
CseI GACGC 1 cut(s) 157
Csp6I GTAC 1 cut(s) 562
CviAII CATG 1 cut(s) 859
CviQI GTAC 1 cut(s) 562
DdeI CTNAG 4 cut(s) 336, 341, 698, 724
DpnI GATC 4 cut(s) 535, 708, 1030, 1037
DpnII GATC 4 cut(s) 533, 706, 1028, 1035
DrdI GACNNNNNNGTC 1 cut(s) 167
DseDI GACNNNNNNGTC 1 cut(s) 167
EaeI YGGCCR 1 cut(s) 876
Eam1104I CTCTTC 3 cut(s) 675, 809, 990
EarI CTCTTC 3 cut(s) 675, 809, 990
EciI GGCGGA 2 cut(s) 73, 451
Eco130I CCWWGG 1 cut(s) 177
Eco24I GRGCYC 1 cut(s) 258
Eco57I CTGAAG 2 cut(s) 346, 971
Eco88I CYCGRG 1 cut(s) 951
EcoT14I CCWWGG 1 cut(s) 177
EcoT38I GRGCYC 1 cut(s) 258
ErhI CCWWGG 1 cut(s) 177
FaeI CATG 1 cut(s) 862
FaiI YATR 5 cut(s) 424, 455, 509, 860, 1008
FaqI GGGAC 2 cut(s) 513, 844
FatI CATG 1 cut(s) 858
Fnu4HI GCNGC 5 cut(s) 141, 144, 301, 304, 914
FokI GGATG 5 cut(s) 83, 170, 267, 791, 979
FriOI GRGCYC 1 cut(s) 258
Fsp4HI GCNGC 5 cut(s) 141, 144, 301, 304, 914
FspBI CTAG 7 cut(s) 251, 261, 270, 408, 518, 566, 917
GluI GCNGC 5 cut(s) 141, 144, 301, 304, 914
GsaI CCCAGC 1 cut(s) 434
GsuI CTGGAG 2 cut(s) 417, 916
HaeIII GGCC 3 cut(s) 5, 274, 878
HapII CCGG 1 cut(s) 717
HgaI GACGC 1 cut(s) 157
Hin1I GRCGYC 1 cut(s) 690
Hin1II CATG 1 cut(s) 862
HincII GTYRAC 1 cut(s) 646
HindII GTYRAC 1 cut(s) 646
HindIII AAGCTT 1 cut(s) 749
HinfI GANTC 4 cut(s) 20, 80, 123, 233
HpaII CCGG 1 cut(s) 717
HphI GGTGA 3 cut(s) 106, 913, 1024
Hpy166II GTNNAC 3 cut(s) 415, 500, 646
Hpy188I TCNGA 5 cut(s) 25, 106, 699, 706, 746
Hpy188III TCNNGA 3 cut(s) 120, 518, 726
Hpy8I GTNNAC 3 cut(s) 415, 500, 646
Hpy99I CGWCG 5 cut(s) 164, 173, 377, 692, 767
HpyAV CCTTC 5 cut(s) 20, 232, 821, 1009, 1013
HpyCH4III ACNGT 1 cut(s) 884
HpyCH4IV ACGT 2 cut(s) 648, 690
HpyCH4V TGCA 2 cut(s) 306, 632
HpyF10VI GCNNNNNNNGC 7 cut(s) 300, 317, 442, 614, 638, 875, 922
HpyF3I CTNAG 4 cut(s) 336, 341, 698, 724
HpySE526I ACGT 2 cut(s) 648, 690
Hsp92I GRCGYC 1 cut(s) 690
Hsp92II CATG 1 cut(s) 862
KpnI GGTACC 1 cut(s) 565
KroI GCCGGC 1 cut(s) 716
KroNI GCCGGC 1 cut(s) 718
Kzo9I GATC 4 cut(s) 533, 706, 1028, 1035
LguI GCTCTTC 1 cut(s) 990
LmnI GCTCC 1 cut(s) 935
Lsp1109I GCAGC 4 cut(s) 152, 287, 290, 925
MaeI CTAG 7 cut(s) 251, 261, 270, 408, 518, 566, 917
MaeII ACGT 2 cut(s) 648, 690
MaeIII GTNAC 2 cut(s) 112, 871
MalI GATC 4 cut(s) 535, 708, 1030, 1037
MboI GATC 4 cut(s) 533, 706, 1028, 1035
MflI RGATCY 1 cut(s) 1028
MhlI GDGCHC 1 cut(s) 258
MluCI AATT 5 cut(s) 385, 589, 735, 767, 997
MlyI GAGTC 3 cut(s) 14, 74, 117
MmeI TCCRAC 3 cut(s) 312, 576, 724
MroNI GCCGGC 1 cut(s) 716
MseI TTAA 1 cut(s) 471
MspA1I CMGCKG 1 cut(s) 300
MspI CCGG 1 cut(s) 717
Mva1269I GAATGC 1 cut(s) 985
MvnI CGCG 1 cut(s) 311
MwoI GCNNNNNNNGC 7 cut(s) 300, 317, 442, 614, 638, 875, 922
NaeI GCCGGC 1 cut(s) 718
NdeII GATC 4 cut(s) 533, 706, 1028, 1035
NgoMIV GCCGGC 1 cut(s) 716
NlaIII CATG 1 cut(s) 862
NlaIV GGNNCC 3 cut(s) 6, 563, 931
NmeAIII GCCGAG 1 cut(s) 906
NmuCI GTSAC 1 cut(s) 112
NspV TTCGAA 2 cut(s) 217, 477
PciSI GCTCTTC 1 cut(s) 990
PcsI WCGNNNNNNNCGW 1 cut(s) 165
PctI GAATGC 1 cut(s) 985
PdiI GCCGGC 1 cut(s) 718
PfeI GAWTC 1 cut(s) 233
PflFI GACNNNGTC 2 cut(s) 56, 167
PkrI GCNGC 5 cut(s) 142, 145, 302, 305, 915
PleI GAGTC 3 cut(s) 14, 74, 117
PpsI GAGTC 3 cut(s) 14, 74, 117
PsiI TTATAA 1 cut(s) 455
Psp1406I AACGTT 1 cut(s) 648
PspFI CCCAGC 1 cut(s) 430
PspN4I GGNNCC 3 cut(s) 6, 563, 931
PspPI GGNCC 1 cut(s) 4
PstNI CAGNNNCTG 2 cut(s) 303, 939
PsuI RGATCY 1 cut(s) 1028
PsyI GACNNNGTC 2 cut(s) 56, 167
PvuII CAGCTG 1 cut(s) 300
RsaI GTAC 1 cut(s) 563
RsaNI GTAC 1 cut(s) 562
SapI GCTCTTC 1 cut(s) 990
SaqAI TTAA 1 cut(s) 471
SatI GCNGC 5 cut(s) 141, 144, 301, 304, 914
Sau3AI GATC 4 cut(s) 533, 706, 1028, 1035
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 3 cut(s) 14, 74, 117
SduI GDGCHC 1 cut(s) 258
SfuI TTCGAA 2 cut(s) 217, 477
Sse9I AATT 5 cut(s) 385, 589, 735, 767, 997
SsiI CCGC 7 cut(s) 84, 144, 292, 311, 436, 641, 1010
SspMI CTAG 7 cut(s) 251, 261, 270, 408, 518, 566, 917
StyI CCWWGG 1 cut(s) 177
TaaI ACNGT 1 cut(s) 884
TaiI ACGT 2 cut(s) 651, 693
TaqI TCGA 7 cut(s) 126, 159, 217, 375, 467, 477, 762
TasI AATT 5 cut(s) 385, 589, 735, 767, 997
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 1 cut(s) 233
Tru1I TTAA 1 cut(s) 471
Tru9I TTAA 1 cut(s) 471
TscAI CASTG 1 cut(s) 889
TseFI GTSAC 1 cut(s) 112
TseI GCWGC 4 cut(s) 140, 300, 303, 913
Tsp45I GTSAC 1 cut(s) 112
TspDTI ATGAA 2 cut(s) 795, 807
TspRI CASTG 1 cut(s) 889
Tth111I GACNNNGTC 2 cut(s) 56, 167
XapI RAATTY 2 cut(s) 385, 767
XbaI TCTAGA 1 cut(s) 517
XspI CTAG 7 cut(s) 251, 261, 270, 408, 518, 566, 917
ZraI GACGTC 1 cut(s) 691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.