Gene Detail - Rorug03G0358900

Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003700

Physical Location & Seq

Genomic Coordinates Reverse (-)

44756377 .. 44760129

Gene Structure 3753 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 22 bp

Sequence not available

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003824 GO:0004760 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005886 GO:0006082 GO:0006520 GO:0006544 GO:0006545 GO:0006807 GO:0008150 GO:0008152 GO:0008453 GO:0008483 GO:0008652 GO:0009058 GO:0009069 GO:0009070 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009853 GO:0009987 GO:0016020 GO:0016053 GO:0016740 GO:0016769 GO:0017144 GO:0019265 GO:0019752 GO:0042133 GO:0042136 GO:0042579 GO:0043094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0048046 GO:0050281 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00250 ko00260 ko00630 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko04146 map00250 map00260 map00630 map00680 map01100 map01110 map01120 map01130 map01200 map04146

Pfam Domains

Protein Families

Aminotran_5

Genomic Context

Gene Family Tree

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Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003700)

Species	Orthologous Gene IDs
malus_domestica	MD17G1090900.v1.1
pyrus_communis	pycom01g15950
rosa_chinensis	RchiOBHm_Chr2g0120141
rosa_laevigata	RLG00000013180 RLG00000023104 RLG00000027431 RLG00000034880 RLG00000036296
rosa_multiflora	Rmu_co8384813.1_g000001 Rmu_sc0000147.1_g000060 Rmu_sc0001211.1_g000050 Rmu_sc0001822.1_g000010 Rmu_sc0003092.1_g000049 Rmu_sc0003116.1_g000046
rosa_roxburghii	Rroxscaffold_3G00244520 Rroxscaffold_7G00217730
rosa_rugosa	Rorug02G0433800 Rorug03G0358900.1
rosa_samantha	Rh1AG167400 Rh1AG187500 Rh1AG231400 Rh1AG231700 Rh1BG153600 Rh1BG232500 Rh1BG232600 Rh1CG215500 Rh1CG248700 Rh1DG260200 Rh2DG308700 Rh4BG034400 Rh6AG041000 Rh6AG041100 Rh6AG041400 Rh6BG036700
rosa_wichuraiana	Rw2G022720

Restriction Enzyme Sites

1 / 10

No common restriction sites found or sequence not available.