Rh4BG034400

carboxylesterase 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0003700
Physical Location & Seq
Reverse (-)
6268467 .. 6268730
264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG034400.1

Sequence Viewer

Length: 264 bp
ATGGCCCCCGACCAAGACGACACCAAAGGCGACCTCTCCTCCTCCCCCCAAGACGAGGACGTCGACGACTCCGCCTCTCCTTTCTCCACCTCCGATGCTGTCACCTCCCGACTCGAAAAAGCCATTGCAGCCTCCAATCCCTTCGACGACGGTGTCGCCACCAAGGAAATCCATATCAATCCTTTTACTTCTCTATCTATTCGAATCTTCCTCCCCGAATCCGCTCTCAACCCGTCGGAGCCCTCCTGTAAATCTAGGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

87

Amino Acids

9.27

Weight (kDa)

4.19

Isoelectric Point (pI)

72.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 59, 152
AatII GACGTC 1 cut(s) 63
AccBSI CCGCTC 1 cut(s) 224
AccI GTMKAC 1 cut(s) 63
AciI CCGC 2 cut(s) 72, 222
AcyI GRCGYC 1 cut(s) 60
AfiI CCNNNNNNNGG 1 cut(s) 55
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 128
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 94
AsuII TTCGAA 1 cut(s) 202
BanII GRGCYC 1 cut(s) 243
BbvI GCAGC 1 cut(s) 140
BfaI CTAG 1 cut(s) 255
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 2 cut(s) 6, 240
BmsI GCATC 1 cut(s) 85
Bpu14I TTCGAA 1 cut(s) 202
BsaHI GRCGYC 1 cut(s) 60
BsaJI CCNNGG 1 cut(s) 162
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
Bsc4I CCNNNNNNNGG 1 cut(s) 55
Bse3DI GCAATG 1 cut(s) 123
BseDI CCNNGG 1 cut(s) 162
BseLI CCNNNNNNNGG 1 cut(s) 55
BseMI GCAATG 1 cut(s) 123
BseRI GAGGAG 2 cut(s) 28, 31
BseXI GCAGC 1 cut(s) 140
BshFI GGCC 1 cut(s) 5
BslI CCNNNNNNNGG 1 cut(s) 55
BsnI GGCC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 202
Bsp1286I GDGCHC 1 cut(s) 243
BspACI CCGC 2 cut(s) 72, 222
BspANI GGCC 1 cut(s) 5
BspLI GGNNCC 2 cut(s) 6, 240
BspT104I TTCGAA 1 cut(s) 202
BsrBI CCGCTC 1 cut(s) 224
BsrDI GCAATG 1 cut(s) 123
BssECI CCNNGG 1 cut(s) 162
BssNI GRCGYC 1 cut(s) 60
BssT1I CCWWGG 1 cut(s) 162
Bst4CI ACNGT 1 cut(s) 152
BstACI GRCGYC 1 cut(s) 60
BstBI TTCGAA 1 cut(s) 202
BstMWI GCNNNNNNNGC 1 cut(s) 128
BstV1I GCAGC 1 cut(s) 140
BsuRI GGCC 1 cut(s) 5
Cfr13I GGNCC 1 cut(s) 4
CviJI RGCY 4 cut(s) 5, 122, 131, 241
CviKI_1 RGCY 4 cut(s) 5, 122, 131, 241
DrdI GACNNNNNNGTC 2 cut(s) 59, 152
DseDI GACNNNNNNGTC 2 cut(s) 59, 152
EciI GGCGGA 1 cut(s) 61
Eco130I CCWWGG 1 cut(s) 162
Eco24I GRGCYC 1 cut(s) 243
EcoT14I CCWWGG 1 cut(s) 162
EcoT38I GRGCYC 1 cut(s) 243
ErhI CCWWGG 1 cut(s) 162
FaiI YATR 1 cut(s) 174
FblI GTMKAC 1 cut(s) 63
Fnu4HI GCNGC 1 cut(s) 129
FriOI GRGCYC 1 cut(s) 243
Fsp4HI GCNGC 1 cut(s) 129
FspBI CTAG 1 cut(s) 255
GluI GCNGC 1 cut(s) 129
HaeIII GGCC 1 cut(s) 5
Hin1I GRCGYC 1 cut(s) 60
HincII GTYRAC 1 cut(s) 64
HindII GTYRAC 1 cut(s) 64
HinfI GANTC 4 cut(s) 68, 111, 204, 218
HphI GGTGA 1 cut(s) 94
Hpy166II GTNNAC 1 cut(s) 64
Hpy188I TCNGA 2 cut(s) 94, 238
Hpy188III TCNNGA 1 cut(s) 108
Hpy8I GTNNAC 1 cut(s) 64
Hpy99I CGWCG 5 cut(s) 65, 68, 149, 152, 238
HpyAV CCTTC 1 cut(s) 151
HpyCH4III ACNGT 1 cut(s) 152
HpyCH4IV ACGT 1 cut(s) 60
HpyCH4V TGCA 1 cut(s) 128
HpyF10VI GCNNNNNNNGC 1 cut(s) 128
HpySE526I ACGT 1 cut(s) 60
Hsp92I GRCGYC 1 cut(s) 60
LmnI GCTCC 1 cut(s) 238
LpnPI CCDG 1 cut(s) 259
Lsp1109I GCAGC 1 cut(s) 140
LweI GCATC 1 cut(s) 85
MaeI CTAG 1 cut(s) 255
MaeII ACGT 1 cut(s) 60
MaeIII GTNAC 1 cut(s) 100
MbiI CCGCTC 1 cut(s) 224
MboII GAAGA 1 cut(s) 199
MhlI GDGCHC 1 cut(s) 243
MlyI GAGTC 2 cut(s) 62, 105
MmeI TCCRAC 1 cut(s) 216
MwoI GCNNNNNNNGC 1 cut(s) 128
NlaIV GGNNCC 2 cut(s) 6, 240
NmuCI GTSAC 1 cut(s) 100
NspV TTCGAA 1 cut(s) 202
PcsI WCGNNNNNNNCGW 1 cut(s) 60
PfeI GAWTC 2 cut(s) 204, 218
PflFI GACNNNGTC 1 cut(s) 152
PkrI GCNGC 1 cut(s) 130
PleI GAGTC 2 cut(s) 62, 105
PpsI GAGTC 2 cut(s) 62, 105
PspN4I GGNNCC 2 cut(s) 6, 240
PspPI GGNCC 1 cut(s) 4
PsyI GACNNNGTC 1 cut(s) 152
SalI GTCGAC 1 cut(s) 62
SatI GCNGC 1 cut(s) 129
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 2 cut(s) 62, 105
SduI GDGCHC 1 cut(s) 243
SetI ASST 4 cut(s) 36, 63, 92, 107
SfaNI GCATC 1 cut(s) 85
SfuI TTCGAA 1 cut(s) 202
SgrDI CGTCGACG 1 cut(s) 62
SsiI CCGC 2 cut(s) 72, 222
SspMI CTAG 1 cut(s) 255
StyI CCWWGG 1 cut(s) 162
TaaI ACNGT 1 cut(s) 152
TaiI ACGT 1 cut(s) 63
TaqI TCGA 4 cut(s) 63, 114, 144, 202
TfiI GAWTC 2 cut(s) 204, 218
TseFI GTSAC 1 cut(s) 100
TseI GCWGC 1 cut(s) 128
Tsp45I GTSAC 1 cut(s) 100
Tth111I GACNNNGTC 1 cut(s) 152
XmiI GTMKAC 1 cut(s) 63
XspI CTAG 1 cut(s) 255
ZraI GACGTC 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.