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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD17G1090900.v1.1 |
| pyrus_communis | pycom01g15950 |
| rosa_chinensis | RchiOBHm_Chr2g0120141 |
| rosa_laevigata | RLG00000013180 RLG00000023104 RLG00000027431 RLG00000034880 RLG00000036296 |
| rosa_multiflora | Rmu_co8384813.1_g000001 Rmu_sc0000147.1_g000060 Rmu_sc0001211.1_g000050 Rmu_sc0001822.1_g000010 Rmu_sc0003092.1_g000049 Rmu_sc0003116.1_g000046 |
| rosa_roxburghii | Rroxscaffold_3G00244520 Rroxscaffold_7G00217730 |
| rosa_rugosa | Rorug02G0433800 Rorug03G0358900.1 |
| rosa_samantha | Rh1AG167400 Rh1AG187500 Rh1AG231400 Rh1AG231700 Rh1BG153600 Rh1BG232500 Rh1BG232600 Rh1CG215500 Rh1CG248700 Rh1DG260200 Rh2DG308700 Rh4BG034400 Rh6AG041000 Rh6AG041100 Rh6AG041400 Rh6BG036700 |
| rosa_wichuraiana | Rw2G022720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 150 |
| AclWI | GGATC | 1 cut(s) | 194 |
| AcuI | CTGAAG | 1 cut(s) | 382 |
| AfaI | GTAC | 2 cut(s) | 93, 381 |
| AgsI | TTSAA | 2 cut(s) | 35, 289 |
| AluBI | AGCT | 2 cut(s) | 24, 127 |
| AluI | AGCT | 2 cut(s) | 24, 127 |
| AlwI | GGATC | 1 cut(s) | 194 |
| Ama87I | CYCGRG | 1 cut(s) | 131 |
| AoxI | GGCC | 1 cut(s) | 255 |
| ApeKI | GCWGC | 1 cut(s) | 21 |
| AsuC2I | CCSGG | 1 cut(s) | 203 |
| AsuHPI | GGTGA | 1 cut(s) | 190 |
| AvaI | CYCGRG | 1 cut(s) | 131 |
| BbsI | GAAGAC | 1 cut(s) | 388 |
| BbvI | GCAGC | 1 cut(s) | 33 |
| BccI | CCATC | 3 cut(s) | 137, 229, 394 |
| BcnI | CCSGG | 1 cut(s) | 203 |
| BisI | GCNGC | 1 cut(s) | 22 |
| BlsI | GCNGC | 1 cut(s) | 23 |
| Bme1390I | CCNGG | 1 cut(s) | 203 |
| BmeT110I | CYCGRG | 1 cut(s) | 131 |
| BmrFI | CCNGG | 1 cut(s) | 203 |
| BoxI | GACNNNNGTC | 1 cut(s) | 224 |
| BpiI | GAAGAC | 1 cut(s) | 388 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 8, 40, 251, 283 |
| BpuMI | CCSGG | 1 cut(s) | 203 |
| Bsa29I | ATCGAT | 1 cut(s) | 189 |
| BsaJI | CCNNGG | 1 cut(s) | 258 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 144, 174 |
| BseCI | ATCGAT | 1 cut(s) | 189 |
| BseDI | CCNNGG | 1 cut(s) | 258 |
| BseXI | GCAGC | 1 cut(s) | 33 |
| BshFI | GGCC | 1 cut(s) | 257 |
| BshVI | ATCGAT | 1 cut(s) | 189 |
| BsiHKCI | CYCGRG | 1 cut(s) | 131 |
| BsiSI | CCGG | 1 cut(s) | 202 |
| BsnI | GGCC | 1 cut(s) | 257 |
| BsoBI | CYCGRG | 1 cut(s) | 131 |
| Bsp143I | GATC | 2 cut(s) | 64, 186 |
| BspACI | CCGC | 1 cut(s) | 150 |
| BspANI | GGCC | 1 cut(s) | 257 |
| BspDI | ATCGAT | 1 cut(s) | 189 |
| BspPI | GGATC | 1 cut(s) | 194 |
| BssECI | CCNNGG | 1 cut(s) | 258 |
| BssMI | GATC | 2 cut(s) | 64, 186 |
| BstKTI | GATC | 2 cut(s) | 67, 189 |
| BstMBI | GATC | 2 cut(s) | 64, 186 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 224 |
| BstSCI | CCNGG | 1 cut(s) | 201 |
| BstV1I | GCAGC | 1 cut(s) | 33 |
| BstV2I | GAAGAC | 1 cut(s) | 388 |
| Bsu15I | ATCGAT | 1 cut(s) | 189 |
| BsuRI | GGCC | 1 cut(s) | 257 |
| BsuTUI | ATCGAT | 1 cut(s) | 189 |
| ClaI | ATCGAT | 1 cut(s) | 189 |
| Csp6I | GTAC | 2 cut(s) | 92, 380 |
| CviJI | RGCY | 3 cut(s) | 24, 127, 257 |
| CviKI_1 | RGCY | 3 cut(s) | 24, 127, 257 |
| CviQI | GTAC | 2 cut(s) | 92, 380 |
| DpnI | GATC | 2 cut(s) | 66, 188 |
| DpnII | GATC | 2 cut(s) | 64, 186 |
| EciI | GGCGGA | 1 cut(s) | 165 |
| Eco57I | CTGAAG | 1 cut(s) | 382 |
| Eco88I | CYCGRG | 1 cut(s) | 131 |
| FaiI | YATR | 1 cut(s) | 57 |
| Fnu4HI | GCNGC | 1 cut(s) | 22 |
| Fsp4HI | GCNGC | 1 cut(s) | 22 |
| GluI | GCNGC | 1 cut(s) | 22 |
| HaeIII | GGCC | 1 cut(s) | 257 |
| HapII | CCGG | 1 cut(s) | 202 |
| HincII | GTYRAC | 1 cut(s) | 219 |
| HindII | GTYRAC | 1 cut(s) | 219 |
| HinfI | GANTC | 2 cut(s) | 194, 266 |
| HpaII | CCGG | 1 cut(s) | 202 |
| HphI | GGTGA | 1 cut(s) | 190 |
| Hpy166II | GTNNAC | 2 cut(s) | 219, 265 |
| Hpy188I | TCNGA | 3 cut(s) | 85, 391, 401 |
| Hpy188III | TCNNGA | 3 cut(s) | 32, 131, 316 |
| Hpy8I | GTNNAC | 2 cut(s) | 219, 265 |
| Hpy99I | CGWCG | 1 cut(s) | 125 |
| HpyAV | CCTTC | 6 cut(s) | 161, 247, 265, 269, 283, 356 |
| HpyCH4IV | ACGT | 1 cut(s) | 382 |
| HpySE526I | ACGT | 1 cut(s) | 382 |
| Kzo9I | GATC | 2 cut(s) | 64, 186 |
| LmnI | GCTCC | 1 cut(s) | 298 |
| LpnPI | CCDG | 2 cut(s) | 215, 230 |
| Lsp1109I | GCAGC | 1 cut(s) | 33 |
| MaeII | ACGT | 1 cut(s) | 382 |
| MalI | GATC | 2 cut(s) | 66, 188 |
| MboI | GATC | 2 cut(s) | 64, 186 |
| MboII | GAAGA | 2 cut(s) | 113, 388 |
| MluCI | AATT | 1 cut(s) | 35 |
| MlyI | GAGTC | 2 cut(s) | 203, 260 |
| MmeI | TCCRAC | 2 cut(s) | 118, 276 |
| MspI | CCGG | 1 cut(s) | 202 |
| MspR9I | CCNGG | 1 cut(s) | 203 |
| NciI | CCSGG | 1 cut(s) | 203 |
| NdeII | GATC | 2 cut(s) | 64, 186 |
| NmeAIII | GCCGAG | 2 cut(s) | 96, 283 |
| PaeR7I | CTCGAG | 1 cut(s) | 131 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 129, 203 |
| PkrI | GCNGC | 1 cut(s) | 23 |
| PleI | GAGTC | 2 cut(s) | 202, 260 |
| PpsI | GAGTC | 2 cut(s) | 202, 260 |
| PshAI | GACNNNNGTC | 1 cut(s) | 224 |
| RsaI | GTAC | 2 cut(s) | 93, 381 |
| RsaNI | GTAC | 2 cut(s) | 92, 380 |
| SatI | GCNGC | 1 cut(s) | 22 |
| Sau3AI | GATC | 2 cut(s) | 64, 186 |
| SchI | GAGTC | 2 cut(s) | 203, 260 |
| ScrFI | CCNGG | 1 cut(s) | 203 |
| SetI | ASST | 8 cut(s) | 26, 129, 138, 180, 228, 264, 313, 385 |
| Sfr274I | CTCGAG | 1 cut(s) | 131 |
| SlaI | CTCGAG | 1 cut(s) | 131 |
| SmlI | CTYRAG | 1 cut(s) | 131 |
| SmoI | CTYRAG | 1 cut(s) | 131 |
| Sse9I | AATT | 1 cut(s) | 35 |
| SsiI | CCGC | 1 cut(s) | 150 |
| StyD4I | CCNGG | 1 cut(s) | 201 |
| TaiI | ACGT | 1 cut(s) | 385 |
| TaqI | TCGA | 5 cut(s) | 132, 162, 189, 269, 315 |
| TasI | AATT | 1 cut(s) | 35 |
| TseI | GCWGC | 1 cut(s) | 21 |
| TspDTI | ATGAA | 2 cut(s) | 72, 357 |
| TspGWI | ACGGA | 2 cut(s) | 20, 236 |
| XhoI | CTCGAG | 1 cut(s) | 131 |