RchiOBHm_Chr2g0120141

carboxylesterase 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0003700
Physical Location & Seq
Forward (+)
32862500 .. 32863175
676 bp
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UTR
Exon/CDS
Intron
PRQ49279

Sequence Viewer

Length: 315 bp
ATGGCCCTCGACCAAGATGCCGCCGAAGGCAACCCCTCCTCCTCCCCCCAAGACAACGTCTTTGGCGACTATGACGATGACGATGACGATGACGACGTCGACGACTCTGCCTCTCCTTTCTCCACCTTCGATGGCGTCACCTCCCGACCCGAAGAAGCCATCGCCGCCGCCAATCCCTTATTTGCGGACGATGTCGCCACCAAGGACATCCACATCGATCTTTTCACTTCTCTATCTATTCGAATCTTCCTCTCCGAGTTTGCTCTCAACCACCGGAGCCCTCCGATAAACCTAGGGTTTGACAGCCCGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

104

Amino Acids

11.22

Weight (kDa)

4.05

Isoelectric Point (pI)

67.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 99
AccI GTMKAC 1 cut(s) 99
AciI CCGC 4 cut(s) 21, 165, 168, 185
AcyI GRCGYC 2 cut(s) 96, 135
AoxI GGCC 1 cut(s) 3
ArsI GACNNNNNNTTYG 2 cut(s) 44, 76
AspA2I CCTAGG 1 cut(s) 292
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 130
AsuII TTCGAA 1 cut(s) 241
AvrII CCTAGG 1 cut(s) 292
BanII GRGCYC 1 cut(s) 281
BccI CCATC 2 cut(s) 125, 167
BcgI CGANNNNNNTGC 3 cut(s) 33, 89, 123
BfaI CTAG 1 cut(s) 293
BisI GCNGC 3 cut(s) 21, 165, 168
BlnI CCTAGG 1 cut(s) 292
BlsI GCNGC 3 cut(s) 22, 166, 169
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 278
BmsI GCATC 1 cut(s) 7
Bpu14I TTCGAA 1 cut(s) 241
Bsa29I ATCGAT 1 cut(s) 216
BsaHI GRCGYC 2 cut(s) 96, 135
BsaJI CCNNGG 2 cut(s) 201, 292
BsaWI WCCGGW 1 cut(s) 273
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
BseCI ATCGAT 1 cut(s) 216
BseDI CCNNGG 2 cut(s) 201, 292
BseGI GGATG 1 cut(s) 207
BseRI GAGGAG 2 cut(s) 28, 31
BshFI GGCC 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 216
BsiSI CCGG 1 cut(s) 274
BsnI GGCC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 241
Bsp1286I GDGCHC 1 cut(s) 281
Bsp143I GATC 2 cut(s) 217, 309
BspACI CCGC 4 cut(s) 21, 165, 168, 185
BspANI GGCC 1 cut(s) 5
BspDI ATCGAT 1 cut(s) 216
BspLI GGNNCC 1 cut(s) 278
BspT104I TTCGAA 1 cut(s) 241
BssECI CCNNGG 2 cut(s) 201, 292
BssMI GATC 2 cut(s) 217, 309
BssNI GRCGYC 2 cut(s) 96, 135
BssT1I CCWWGG 2 cut(s) 201, 292
BstACI GRCGYC 2 cut(s) 96, 135
BstBI TTCGAA 1 cut(s) 241
BstF5I GGATG 1 cut(s) 207
BstKTI GATC 2 cut(s) 220, 312
BstMBI GATC 2 cut(s) 217, 309
BstMWI GCNNNNNNNGC 1 cut(s) 164
Bsu15I ATCGAT 1 cut(s) 216
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 216
BtgZI GCGATG 1 cut(s) 145
BtsCI GGATG 1 cut(s) 207
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 216
CseI GACGC 1 cut(s) 124
CviJI RGCY 4 cut(s) 5, 158, 279, 306
CviKI_1 RGCY 4 cut(s) 5, 158, 279, 306
DpnI GATC 2 cut(s) 219, 311
DpnII GATC 2 cut(s) 217, 309
Eco130I CCWWGG 2 cut(s) 201, 292
Eco24I GRGCYC 1 cut(s) 281
EcoT14I CCWWGG 2 cut(s) 201, 292
EcoT38I GRGCYC 1 cut(s) 281
ErhI CCWWGG 2 cut(s) 201, 292
FaiI YATR 1 cut(s) 72
FblI GTMKAC 1 cut(s) 99
Fnu4HI GCNGC 3 cut(s) 21, 165, 168
FokI GGATG 1 cut(s) 194
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 3 cut(s) 21, 165, 168
FspBI CTAG 1 cut(s) 293
GluI GCNGC 3 cut(s) 21, 165, 168
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 274
HgaI GACGC 1 cut(s) 124
Hin1I GRCGYC 2 cut(s) 96, 135
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HinfI GANTC 2 cut(s) 104, 243
HpaII CCGG 1 cut(s) 274
HphI GGTGA 1 cut(s) 130
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 3 cut(s) 256, 285, 314
Hpy188III TCNNGA 1 cut(s) 144
Hpy8I GTNNAC 1 cut(s) 100
Hpy99I CGWCG 3 cut(s) 98, 101, 104
HpyAV CCTTC 2 cut(s) 20, 136
HpyCH4IV ACGT 2 cut(s) 57, 96
HpyF10VI GCNNNNNNNGC 1 cut(s) 164
HpySE526I ACGT 2 cut(s) 57, 96
Hsp92I GRCGYC 2 cut(s) 96, 135
Kzo9I GATC 2 cut(s) 217, 309
LmnI GCTCC 1 cut(s) 276
LpnPI CCDG 1 cut(s) 287
LweI GCATC 1 cut(s) 7
MaeI CTAG 1 cut(s) 293
MaeII ACGT 2 cut(s) 57, 96
MaeIII GTNAC 1 cut(s) 136
MalI GATC 2 cut(s) 219, 311
MboI GATC 2 cut(s) 217, 309
MboII GAAGA 2 cut(s) 164, 238
MhlI GDGCHC 1 cut(s) 281
MlyI GAGTC 1 cut(s) 98
MnlI CCTC 8 cut(s) 17, 46, 49, 52, 121, 151, 260, 291
MspI CCGG 1 cut(s) 274
MwoI GCNNNNNNNGC 1 cut(s) 164
NdeII GATC 2 cut(s) 217, 309
NlaIV GGNNCC 1 cut(s) 278
NmuCI GTSAC 1 cut(s) 136
NspV TTCGAA 1 cut(s) 241
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 93, 99
PfeI GAWTC 1 cut(s) 243
PflFI GACNNNGTC 3 cut(s) 56, 95, 191
PkrI GCNGC 3 cut(s) 22, 166, 169
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
PspN4I GGNNCC 1 cut(s) 278
PspPI GGNCC 1 cut(s) 4
PsyI GACNNNGTC 3 cut(s) 56, 95, 191
SalI GTCGAC 1 cut(s) 98
SatI GCNGC 3 cut(s) 21, 165, 168
Sau3AI GATC 2 cut(s) 217, 309
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 1 cut(s) 98
SduI GDGCHC 1 cut(s) 281
SetI ASST 5 cut(s) 60, 99, 128, 143, 294
SfaNI GCATC 1 cut(s) 7
SfuI TTCGAA 1 cut(s) 241
SgeI CNNG 9 cut(s) 20, 26, 62, 156, 161, 214, 268, 286, 305
SgrDI CGTCGACG 1 cut(s) 98
SsiI CCGC 4 cut(s) 21, 165, 168, 185
SspMI CTAG 1 cut(s) 293
StyI CCWWGG 2 cut(s) 201, 292
TaiI ACGT 2 cut(s) 60, 99
TaqI TCGA 5 cut(s) 9, 99, 129, 216, 241
TauI GCSGC 3 cut(s) 23, 167, 170
TfiI GAWTC 1 cut(s) 243
TseFI GTSAC 1 cut(s) 136
Tsp45I GTSAC 1 cut(s) 136
Tth111I GACNNNGTC 3 cut(s) 56, 95, 191
XmaJI CCTAGG 1 cut(s) 292
XmiI GTMKAC 1 cut(s) 99
XspI CTAG 1 cut(s) 293
ZraI GACGTC 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.