Rh1BG232600

carboxylesterase 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0003700
Physical Location & Seq
Reverse (-)
35562303 .. 35562581
279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG232600.1

Sequence Viewer

Length: 279 bp
ATGGCCCCCGACCAAGAAGACGCCGAAGGCGACCTCTCCTCCTCCCCCCAAGACGACATCGTTGACGAGGACGTCAACGACTCCGCCTCTCCTTTCTCCACCTCCGATGGTGTCACCTCCCGACTCGAAAAAACCATTGCAGCCGCCAATCCCTTGTTCGACGATGGTGTCGCCACCAAGGACATCCACATCGATCCTTTTACTTCTCTATCTATTCGAATCTTCCTCCCCGAATCCACTCTCAACCCGCCGGAGCCCTCTGGTAAATCTAGGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

92

Amino Acids

9.79

Weight (kDa)

4.05

Isoelectric Point (pI)

63.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 71, 167
AatII GACGTC 1 cut(s) 75
AciI CCGC 3 cut(s) 84, 144, 248
AclWI GGATC 1 cut(s) 188
AcyI GRCGYC 2 cut(s) 21, 72
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
AlwI GGATC 1 cut(s) 188
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 140
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 106
AsuII TTCGAA 1 cut(s) 217
BanII GRGCYC 1 cut(s) 258
BbsI GAAGAC 1 cut(s) 24
BbvI GCAGC 1 cut(s) 152
BccI CCATC 2 cut(s) 101, 158
BfaI CTAG 1 cut(s) 270
BisI GCNGC 2 cut(s) 141, 144
BlsI GCNGC 2 cut(s) 142, 145
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 2 cut(s) 6, 255
BpiI GAAGAC 1 cut(s) 24
Bpu14I TTCGAA 1 cut(s) 217
Bsa29I ATCGAT 1 cut(s) 192
BsaHI GRCGYC 2 cut(s) 21, 72
BsaJI CCNNGG 1 cut(s) 177
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
Bse3DI GCAATG 1 cut(s) 135
BseCI ATCGAT 1 cut(s) 192
BseDI CCNNGG 1 cut(s) 177
BseGI GGATG 1 cut(s) 183
BseMI GCAATG 1 cut(s) 135
BseRI GAGGAG 2 cut(s) 28, 31
BseXI GCAGC 1 cut(s) 152
BshFI GGCC 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 192
BsiSI CCGG 1 cut(s) 251
BsnI GGCC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 217
Bsp1286I GDGCHC 1 cut(s) 258
Bsp143I GATC 1 cut(s) 193
BspACI CCGC 3 cut(s) 84, 144, 248
BspANI GGCC 1 cut(s) 5
BspDI ATCGAT 1 cut(s) 192
BspLI GGNNCC 2 cut(s) 6, 255
BspPI GGATC 1 cut(s) 188
BspT104I TTCGAA 1 cut(s) 217
BsrDI GCAATG 1 cut(s) 135
BssECI CCNNGG 1 cut(s) 177
BssMI GATC 1 cut(s) 193
BssNI GRCGYC 2 cut(s) 21, 72
BssT1I CCWWGG 1 cut(s) 177
BstACI GRCGYC 2 cut(s) 21, 72
BstBI TTCGAA 1 cut(s) 217
BstF5I GGATG 1 cut(s) 183
BstKTI GATC 1 cut(s) 196
BstMBI GATC 1 cut(s) 193
BstV1I GCAGC 1 cut(s) 152
BstV2I GAAGAC 1 cut(s) 24
Bsu15I ATCGAT 1 cut(s) 192
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 192
BtsCI GGATG 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 192
CseI GACGC 1 cut(s) 29
CviJI RGCY 3 cut(s) 5, 143, 256
CviKI_1 RGCY 3 cut(s) 5, 143, 256
DpnI GATC 1 cut(s) 195
DpnII GATC 1 cut(s) 193
DrdI GACNNNNNNGTC 2 cut(s) 71, 167
DseDI GACNNNNNNGTC 2 cut(s) 71, 167
EciI GGCGGA 1 cut(s) 73
Eco130I CCWWGG 1 cut(s) 177
Eco24I GRGCYC 1 cut(s) 258
EcoT14I CCWWGG 1 cut(s) 177
EcoT38I GRGCYC 1 cut(s) 258
ErhI CCWWGG 1 cut(s) 177
FauI CCCGC 1 cut(s) 255
Fnu4HI GCNGC 2 cut(s) 141, 144
FokI GGATG 1 cut(s) 170
FriOI GRGCYC 1 cut(s) 258
Fsp4HI GCNGC 2 cut(s) 141, 144
FspBI CTAG 1 cut(s) 270
GluI GCNGC 2 cut(s) 141, 144
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 251
HgaI GACGC 1 cut(s) 29
Hin1I GRCGYC 2 cut(s) 21, 72
HincII GTYRAC 2 cut(s) 64, 76
HindII GTYRAC 2 cut(s) 64, 76
HinfI GANTC 4 cut(s) 80, 123, 219, 233
HpaII CCGG 1 cut(s) 251
HphI GGTGA 1 cut(s) 106
Hpy166II GTNNAC 2 cut(s) 64, 76
Hpy188I TCNGA 1 cut(s) 106
Hpy188III TCNNGA 1 cut(s) 120
Hpy8I GTNNAC 2 cut(s) 64, 76
Hpy99I CGWCG 1 cut(s) 164
HpyAV CCTTC 1 cut(s) 20
HpyCH4IV ACGT 1 cut(s) 72
HpyCH4V TGCA 1 cut(s) 140
HpySE526I ACGT 1 cut(s) 72
Hsp92I GRCGYC 2 cut(s) 21, 72
Kzo9I GATC 1 cut(s) 193
LmnI GCTCC 1 cut(s) 253
LpnPI CCDG 2 cut(s) 246, 264
Lsp1109I GCAGC 1 cut(s) 152
MaeI CTAG 1 cut(s) 270
MaeII ACGT 1 cut(s) 72
MaeIII GTNAC 1 cut(s) 112
MalI GATC 1 cut(s) 195
MboI GATC 1 cut(s) 193
MboII GAAGA 2 cut(s) 29, 214
MhlI GDGCHC 1 cut(s) 258
MlyI GAGTC 2 cut(s) 74, 117
MnlI CCTC 9 cut(s) 44, 49, 52, 61, 97, 112, 127, 236, 268
MspI CCGG 1 cut(s) 251
NdeII GATC 1 cut(s) 193
NlaIV GGNNCC 2 cut(s) 6, 255
NmuCI GTSAC 1 cut(s) 112
NspV TTCGAA 1 cut(s) 217
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PfeI GAWTC 2 cut(s) 219, 233
PkrI GCNGC 2 cut(s) 142, 145
PleI GAGTC 2 cut(s) 74, 117
PpsI GAGTC 2 cut(s) 74, 117
PspN4I GGNNCC 2 cut(s) 6, 255
PspPI GGNCC 1 cut(s) 4
SatI GCNGC 2 cut(s) 141, 144
Sau3AI GATC 1 cut(s) 193
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 2 cut(s) 74, 117
SduI GDGCHC 1 cut(s) 258
SetI ASST 4 cut(s) 36, 75, 104, 119
SfuI TTCGAA 1 cut(s) 217
SsiI CCGC 3 cut(s) 84, 144, 248
SspMI CTAG 1 cut(s) 270
StyI CCWWGG 1 cut(s) 177
TaiI ACGT 1 cut(s) 75
TaqI TCGA 4 cut(s) 126, 159, 192, 217
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 2 cut(s) 219, 233
TseFI GTSAC 1 cut(s) 112
TseI GCWGC 1 cut(s) 140
Tsp45I GTSAC 1 cut(s) 112
XspI CTAG 1 cut(s) 270
ZraI GACGTC 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.