Rh6AG041100

carboxylesterase 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0003700
Physical Location & Seq
Forward (+)
6081786 .. 6082064
279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG041100.1

Sequence Viewer

Length: 279 bp
ATGGCCCTCGACCAAGACGACGCCAAAGGCGACCTCTCCTCCTCCCCCCAAGACGACGTCATTGACGAGGACGTCGACGACTCCGCCTCTCCTTTCTCCACCTCTTATGGTGTCACCTCCCGACTCGAAGAAACCATCGCAGCAGCCAATCCCTTGTTCGACGATGGCGTCGCCACCAAGGACATCCACATCGATCATTTTACTTCTCTATCTATTCGAATCTTCCTCCCCGAATCCGCTCTCAACCCGCCGGAGCCCTCCGGTAAATCTAGGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

92

Amino Acids

9.85

Weight (kDa)

4.05

Isoelectric Point (pI)

59.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 71, 167
AatII GACGTC 2 cut(s) 60, 75
AccBSI CCGCTC 1 cut(s) 239
AccI GTMKAC 1 cut(s) 75
AciI CCGC 3 cut(s) 84, 237, 248
AcyI GRCGYC 4 cut(s) 21, 57, 72, 168
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 2 cut(s) 140, 143
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 106
AsuII TTCGAA 1 cut(s) 217
BanII GRGCYC 1 cut(s) 258
BbvI GCAGC 2 cut(s) 152, 155
BccI CCATC 2 cut(s) 143, 158
BfaI CTAG 1 cut(s) 270
BisI GCNGC 2 cut(s) 141, 144
BlsI GCNGC 2 cut(s) 142, 145
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 255
Bpu14I TTCGAA 1 cut(s) 217
Bsa29I ATCGAT 1 cut(s) 192
BsaHI GRCGYC 4 cut(s) 21, 57, 72, 168
BsaJI CCNNGG 1 cut(s) 177
BsaWI WCCGGW 1 cut(s) 260
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
BseCI ATCGAT 1 cut(s) 192
BseDI CCNNGG 1 cut(s) 177
BseGI GGATG 1 cut(s) 183
BseRI GAGGAG 2 cut(s) 28, 31
BseXI GCAGC 2 cut(s) 152, 155
BshFI GGCC 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 192
BsiSI CCGG 2 cut(s) 251, 261
BsnI GGCC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 217
Bsp1286I GDGCHC 1 cut(s) 258
Bsp143I GATC 1 cut(s) 193
BspACI CCGC 3 cut(s) 84, 237, 248
BspANI GGCC 1 cut(s) 5
BspDI ATCGAT 1 cut(s) 192
BspLI GGNNCC 1 cut(s) 255
BspT104I TTCGAA 1 cut(s) 217
BsrBI CCGCTC 1 cut(s) 239
BssECI CCNNGG 1 cut(s) 177
BssMI GATC 1 cut(s) 193
BssNI GRCGYC 4 cut(s) 21, 57, 72, 168
BssT1I CCWWGG 1 cut(s) 177
BstACI GRCGYC 4 cut(s) 21, 57, 72, 168
BstBI TTCGAA 1 cut(s) 217
BstF5I GGATG 1 cut(s) 183
BstKTI GATC 1 cut(s) 196
BstMBI GATC 1 cut(s) 193
BstV1I GCAGC 2 cut(s) 152, 155
Bsu15I ATCGAT 1 cut(s) 192
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 192
BtgZI GCGATG 1 cut(s) 121
BtsCI GGATG 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 192
CseI GACGC 2 cut(s) 29, 157
CviJI RGCY 3 cut(s) 5, 146, 256
CviKI_1 RGCY 3 cut(s) 5, 146, 256
DpnI GATC 1 cut(s) 195
DpnII GATC 1 cut(s) 193
DrdI GACNNNNNNGTC 2 cut(s) 71, 167
DseDI GACNNNNNNGTC 2 cut(s) 71, 167
EciI GGCGGA 1 cut(s) 73
Eco130I CCWWGG 1 cut(s) 177
Eco24I GRGCYC 1 cut(s) 258
EcoT14I CCWWGG 1 cut(s) 177
EcoT38I GRGCYC 1 cut(s) 258
ErhI CCWWGG 1 cut(s) 177
FaiI YATR 1 cut(s) 108
FauI CCCGC 1 cut(s) 255
FblI GTMKAC 1 cut(s) 75
Fnu4HI GCNGC 2 cut(s) 141, 144
FokI GGATG 1 cut(s) 170
FriOI GRGCYC 1 cut(s) 258
Fsp4HI GCNGC 2 cut(s) 141, 144
FspBI CTAG 1 cut(s) 270
GluI GCNGC 2 cut(s) 141, 144
HaeIII GGCC 1 cut(s) 5
HapII CCGG 2 cut(s) 251, 261
HgaI GACGC 2 cut(s) 29, 157
Hin1I GRCGYC 4 cut(s) 21, 57, 72, 168
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 4 cut(s) 80, 123, 219, 233
HpaII CCGG 2 cut(s) 251, 261
HphI GGTGA 1 cut(s) 106
Hpy166II GTNNAC 1 cut(s) 76
Hpy188III TCNNGA 1 cut(s) 120
Hpy8I GTNNAC 1 cut(s) 76
Hpy99I CGWCG 6 cut(s) 23, 59, 77, 80, 164, 173
HpyCH4IV ACGT 2 cut(s) 57, 72
HpySE526I ACGT 2 cut(s) 57, 72
Hsp92I GRCGYC 4 cut(s) 21, 57, 72, 168
Kzo9I GATC 1 cut(s) 193
LmnI GCTCC 1 cut(s) 253
LpnPI CCDG 2 cut(s) 264, 274
Lsp1109I GCAGC 2 cut(s) 152, 155
MaeI CTAG 1 cut(s) 270
MaeII ACGT 2 cut(s) 57, 72
MaeIII GTNAC 1 cut(s) 112
MalI GATC 1 cut(s) 195
MbiI CCGCTC 1 cut(s) 239
MboI GATC 1 cut(s) 193
MboII GAAGA 2 cut(s) 140, 214
MhlI GDGCHC 1 cut(s) 258
MlyI GAGTC 2 cut(s) 74, 117
MspI CCGG 2 cut(s) 251, 261
NdeII GATC 1 cut(s) 193
NlaIV GGNNCC 1 cut(s) 255
NmuCI GTSAC 1 cut(s) 112
NspV TTCGAA 1 cut(s) 217
PcsI WCGNNNNNNNCGW 5 cut(s) 15, 27, 63, 72, 165
PfeI GAWTC 2 cut(s) 219, 233
PflFI GACNNNGTC 1 cut(s) 56
PkrI GCNGC 2 cut(s) 142, 145
PleI GAGTC 2 cut(s) 74, 117
PpsI GAGTC 2 cut(s) 74, 117
PspN4I GGNNCC 1 cut(s) 255
PspPI GGNCC 1 cut(s) 4
PsyI GACNNNGTC 1 cut(s) 56
SalI GTCGAC 1 cut(s) 74
SatI GCNGC 2 cut(s) 141, 144
Sau3AI GATC 1 cut(s) 193
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 2 cut(s) 74, 117
SduI GDGCHC 1 cut(s) 258
SetI ASST 5 cut(s) 36, 60, 75, 104, 119
SfuI TTCGAA 1 cut(s) 217
SgrDI CGTCGACG 1 cut(s) 74
SsiI CCGC 3 cut(s) 84, 237, 248
SspMI CTAG 1 cut(s) 270
StyI CCWWGG 1 cut(s) 177
TaiI ACGT 2 cut(s) 60, 75
TaqI TCGA 6 cut(s) 9, 75, 126, 159, 192, 217
TfiI GAWTC 2 cut(s) 219, 233
TseFI GTSAC 1 cut(s) 112
TseI GCWGC 2 cut(s) 140, 143
Tsp45I GTSAC 1 cut(s) 112
Tth111I GACNNNGTC 1 cut(s) 56
XmiI GTMKAC 1 cut(s) 75
XspI CTAG 1 cut(s) 270
ZraI GACGTC 2 cut(s) 58, 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.