Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001248

Physical Location & Seq

Genomic Coordinates Reverse (-)

35625391 .. 35630756

Gene Structure 5366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGGACAGAACCAAGTAGATGCATCACAAATCCGAGAGATGGATTCAGGGGAAAAGCGACTTAATGAGCTTGGTTACAAGCAAGAACTCAGAAGAGAGATGACTTTGTTCAAAACTCTTGCAATATCATTTTCGACGATGACACTCTTCACCGGAATCACTCCTTTGTATGGTTCTAGCCTTGTATATGCAGGTCCTGCAAGCCTTGTGTGGGGTTGGGTGGTAGTATCATTTTTCACCTGGTTTGTTGGACTTGCCATGGCAGAGATCTGCTCTTCTTTCCCGACCACAGGTTCTCTTTACTTTTGGGCTGCTCACTTAGCTGGCCCCAAATGGGGTCCCCTTGCATCATGGTGTTGTGCTTGGCTTGAGACCATAGGGCTCATTGCTGGCATAGGTACTCAGGCATATGCAGGATCTCAAACACTGCAAAGTATCATTTTACTATGCACTGGGACAAATAAAGGTGGAGGGTATTTTGCACCAAAGTGGTTGTTCTTATGCATGTACATCGGCCTCACTCTTATATGGGCGTTTCTCAACACATTTGCGTTAGAAGTGATTGCCTTTATTGATATAATATCCATATGGTGGCAGGTCGTTGGAGGGACGGTTATTGTTATAATGCTTCCCCTTGTAGCACTTACTACACAGTCTGCATCATACGTGTTCACAAACTTCGATGTGGCCCCTGAGGTGACGGGAATATCAAGCAAGCCTTATGCAGTGATTCTATCCTTTCTTGTTAGTCAGTATTCATTATATGGATATGATGCTGCAGCACATCTAACAGAAGAAACCAGAGGAGCAGACAAGAATGGTCCTATTGCTATTCTAACAAGCATCGGTATCATTTCAGTATTTGGATGGGCATACATCTTGGCCCTGACTTTCAGCATTCAGGATTTTAGCTACCTATATGATCCCACCAATGAGACTAGAGGAGCATTTGTGCCTGCTCAAATTCTCTATGATGCATTTCATGGGAGGTATCATAGTTCCACTGGAGCAATCATTTTACTATTTATCATTTGGGGTTCATTCTTCTTTGGTGGACTTTCAATTACCACCAGTGCTGCCAGAGTAGTGTATGCTCTATCAAGAGACCAAGGGATTCCATTCTCGTCTGTATGGCGAAAAATTCACCCGAAACACAAAGTTCCTTCCAACGCAGTGTGGCTCTGTGCAGCCATCTGCATTCTCCTGGGACTTCCAATCTTGAAAGTCAATGTAGTATTCACGGCCATAACTTCCATATGTACAATCGGATGGGTAGGAGGTTATGCAGTTCCGATCTTTGCAAGAATGGTAATGCCTGAGAAGAAGTTCAACCCCGGGCCATTTTATTTGGGCAATTTAAGCAGACCGATTTGCTTGGTCGCCTTCCTTTGGATTTGTTACACTTGTTCTGTCTTCCTCCTCCCTACTTACTACCCAATTAGCTGGAGTACATTCAATTATGCACCTGTTGCTTTGAGTGTGGGTTTAGGTCTGATAATGCTTTGGTGGGTGTTGGATGCAAGGAAGTGGTTCAAAGGACCTGTTAGAAACATTGAAACTGAACATAATGGAAAGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015179 GO:0015291 GO:0015297 GO:0015318 GO:0015711 GO:0015807 GO:0015849 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2

Protein Analysis

526

Amino Acids

58.08

Weight (kDa)

8.52

Isoelectric Point (pI)

34.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	35 - 491	1.2e-53	Amino acid permease
AA_permease	PF00324	57 - 510	8.1e-19	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001248)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g24970 FvH4_2g27760 FvH4_2g27770 FvH4_2g27771
malus_domestica	MD00G1162300.v1.1 MD01G1000200.v1.1
prunus_persica	Prupe.1G490100_v2.0.a1 Prupe.1G490200_v2.0.a1 Prupe.1G490200_v2.0.a1 Prupe.1G490300_v2.0.a1 Prupe.4G276400_v2.0.a1 Prupe.4G276400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0122601 RchiOBHm_Chr6g0296631 RchiOBHm_Chr6g0296641 RchiOBHm_Chr6g0296651
rosa_laevigata	RLG00000011673 RLG00000011674 RLG00000011675 RLG00000018694
rosa_multiflora	Rmu_sc0001741.1_g000017 Rmu_sc0001741.1_g000018 Rmu_sc0003133.1_g000008
rosa_roxburghii	Rroxscaffold_7G00171300 Rroxscaffold_7G00171310 Rroxscaffold_7G00171320 Rroxscaffold_7G00178780 Rroxscaffold_7G00178790
rosa_rugosa	Rorug02G0240000 Rorug06G0263800 Rorug06G0263900 Rorug06G0263900
rosa_samantha	Rh2AG298500 Rh2BG307300 Rh2CG285400 Rh2DG322100 Rh6AG375200 Rh6AG375300 Rh6AG375400 Rh6AG375500 Rh6BG383700 Rh6BG383800 Rh6BG383900 Rh6CG388900 Rh6CG389000 Rh6CG389100 Rh6DG376200 Rh6DG376300 Rh6DG376400
rosa_wichuraiana	Rw2G023730 Rw6G032730 Rw6G032740 Rw6G032750 Rw6G032820 Rw6G032830 Rw6G032840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	623
Acc36I	ACCTGC	2 cut(s)	182, 586
AccB7I	CCANNNNNTGG	1 cut(s)	591
AclWI	GGATC	2 cut(s)	424, 917
AcoI	YGGCCR	1 cut(s)	1242
AcsI	RAATTY	2 cut(s)	963, 1140
AfaI	GTAC	4 cut(s)	400, 509, 1261, 1450
AfiI	CCNNNNNNNGG	8 cut(s)	40, 170, 211, 290, 334, 335, 591, 1389
AflIII	ACRYGT	1 cut(s)	666
AgsI	TTSAA	7 cut(s)	112, 1062, 1222, 1330, 1456, 1534, 1556
AjnI	CCWGG	2 cut(s)	239, 1203
AleI	CACNNNNGTG	1 cut(s)	487
AluBI	AGCT	4 cut(s)	70, 323, 912, 1443
AluI	AGCT	4 cut(s)	70, 323, 912, 1443
Alw26I	GTCTC	3 cut(s)	365, 929, 1098
AlwI	GGATC	2 cut(s)	424, 917
AlwNI	CAGNNNCTG	1 cut(s)	197
Ama87I	CYCGRG	1 cut(s)	1334
AoxI	GGCC	6 cut(s)	325, 514, 687, 882, 1242, 1337
ApeKI	GCWGC	5 cut(s)	311, 776, 779, 1076, 1187
ApoI	RAATTY	2 cut(s)	963, 1140
Asp700I	GAANNNNTTC	2 cut(s)	1325, 1529
AspS9I	GGNCC	8 cut(s)	194, 326, 338, 688, 821, 883, 1337, 1538
AsuC2I	CCSGG	2 cut(s)	1335, 1336
AsuHPI	GGTGA	4 cut(s)	142, 229, 709, 1136
AvaI	CYCGRG	1 cut(s)	1334
AvaII	GGWCC	4 cut(s)	194, 338, 821, 1538
AxyI	CCTNAGG	1 cut(s)	693
BanII	GRGCYC	1 cut(s)	384
BbsI	GAAGAC	1 cut(s)	1405
BbvI	GCAGC	5 cut(s)	298, 763, 791, 1063, 1199
BccI	CCATC	4 cut(s)	34, 861, 1199, 1263
BceAI	ACGGC	1 cut(s)	1257
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	2 cut(s)	241, 1205
BcnI	CCSGG	2 cut(s)	1335, 1336
BcoDI	GTCTC	3 cut(s)	365, 929, 1098
BfaI	CTAG	2 cut(s)	177, 939
BfmI	CTRYAG	1 cut(s)	777
BfuAI	ACCTGC	2 cut(s)	182, 586
BglII	AGATCT	1 cut(s)	267
BisI	GCNGC	5 cut(s)	312, 777, 780, 1077, 1188
BlsI	GCNGC	5 cut(s)	313, 778, 781, 1078, 1189
Bme1390I	CCNGG	4 cut(s)	241, 1205, 1335, 1336
Bme18I	GGWCC	4 cut(s)	194, 338, 821, 1538
BmeT110I	CYCGRG	1 cut(s)	1334
BmgT120I	GGNCC	8 cut(s)	194, 326, 338, 688, 821, 883, 1337, 1538
BmiI	GGNNCC	4 cut(s)	328, 339, 340, 690
BmrFI	CCNGG	4 cut(s)	241, 1205, 1335, 1336
BmrI	ACTGGG	1 cut(s)	462
BmsI	GCATC	8 cut(s)	10, 32, 356, 668, 763, 852, 964, 1507
BmuI	ACTGGG	1 cut(s)	462
BpiI	GAAGAC	1 cut(s)	1405
BplI	GAGNNNNNCTC	2 cut(s)	257, 289
BpmI	CTGGAG	2 cut(s)	1026, 1465
BpuEI	CTTGAG	1 cut(s)	389
BpuMI	CCSGG	2 cut(s)	1335, 1336
BsaAI	YACGTR	1 cut(s)	667
BsaI	GGTCTC	2 cut(s)	365, 1098
BsaJI	CCNNGG	5 cut(s)	258, 1108, 1204, 1333, 1334
BsaWI	WCCGGW	1 cut(s)	152
BsaXI	ACNNNNNCTCC	4 cut(s)	597, 627, 936, 966
Bsc4I	CCNNNNNNNGG	8 cut(s)	40, 170, 211, 290, 334, 335, 591, 1389
Bse1I	ACTGG	3 cut(s)	457, 1009, 1071
Bse21I	CCTNAGG	1 cut(s)	693
Bse3DI	GCAATG	1 cut(s)	384
BseBI	CCWGG	2 cut(s)	241, 1205
BseDI	CCNNGG	5 cut(s)	258, 1108, 1204, 1333, 1334
BseGI	GGATG	3 cut(s)	872, 1274, 1522
BseLI	CCNNNNNNNGG	8 cut(s)	40, 170, 211, 290, 334, 335, 591, 1389
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	4 cut(s)	103, 416, 684, 1308
BseNI	ACTGG	3 cut(s)	457, 1009, 1071
BseRI	GAGGAG	3 cut(s)	819, 957, 1409
BseXI	GCAGC	5 cut(s)	298, 763, 791, 1063, 1199
BsgI	GTGCAG	1 cut(s)	1206
BshFI	GGCC	6 cut(s)	327, 516, 689, 884, 1244, 1339
BsiHKCI	CYCGRG	1 cut(s)	1334
BsiSI	CCGG	2 cut(s)	153, 1335
BslFI	GGGAC	5 cut(s)	18, 324, 469, 622, 1221
BslI	CCNNNNNNNGG	8 cut(s)	40, 170, 211, 290, 334, 335, 591, 1389
BsmAI	GTCTC	3 cut(s)	365, 929, 1098
BsmFI	GGGAC	5 cut(s)	18, 324, 469, 622, 1221
BsmI	GAATGC	2 cut(s)	897, 1197
BsnI	GGCC	6 cut(s)	327, 516, 689, 884, 1244, 1339
Bso31I	GGTCTC	2 cut(s)	365, 1098
BsoBI	CYCGRG	1 cut(s)	1334
Bsp1286I	GDGCHC	1 cut(s)	384
Bsp1407I	TGTACA	2 cut(s)	507, 1259
Bsp143I	GATC	4 cut(s)	267, 416, 922, 1293
Bsp19I	CCATGG	1 cut(s)	258
BspANI	GGCC	6 cut(s)	327, 516, 689, 884, 1244, 1339
BspCNI	CTCAG	4 cut(s)	102, 415, 685, 1309
BspLI	GGNNCC	4 cut(s)	328, 339, 340, 690
BspMAI	CTGCAG	1 cut(s)	781
BspMI	ACCTGC	2 cut(s)	182, 586
BspPI	GGATC	2 cut(s)	424, 917
BspQI	GCTCTTC	1 cut(s)	280
BspTNI	GGTCTC	2 cut(s)	365, 1098
BsrDI	GCAATG	1 cut(s)	384
BsrGI	TGTACA	2 cut(s)	507, 1259
BsrI	ACTGG	3 cut(s)	457, 1009, 1071
BssECI	CCNNGG	5 cut(s)	258, 1108, 1204, 1333, 1334
BssMI	GATC	4 cut(s)	267, 416, 922, 1293
BssT1I	CCWWGG	2 cut(s)	258, 1108
Bst2UI	CCWGG	2 cut(s)	241, 1205
Bst4CI	ACNGT	2 cut(s)	613, 654
Bst6I	CTCTTC	3 cut(s)	88, 152, 280
BstAPI	GCANNNNNTGC	2 cut(s)	197, 1469
BstAUI	TGTACA	2 cut(s)	507, 1259
BstBAI	YACGTR	1 cut(s)	667
BstC8I	GCNNGC	5 cut(s)	202, 325, 391, 716, 957
BstDEI	CTNAG	5 cut(s)	89, 319, 402, 693, 1317
BstDSI	CCRYGG	1 cut(s)	258
BstF5I	GGATG	3 cut(s)	872, 1274, 1522
BstKTI	GATC	4 cut(s)	270, 419, 925, 1296
BstMAI	GTCTC	3 cut(s)	365, 929, 1098
BstMBI	GATC	4 cut(s)	267, 416, 922, 1293
BstMWI	GCNNNNNNNGC	4 cut(s)	197, 320, 1359, 1469
BstNI	CCWGG	2 cut(s)	241, 1205
BstNSI	RCATGY	1 cut(s)	508
BstSCI	CCNGG	4 cut(s)	239, 1203, 1333, 1334
BstSFI	CTRYAG	1 cut(s)	777
BstV1I	GCAGC	5 cut(s)	298, 763, 791, 1063, 1199
BstV2I	GAAGAC	1 cut(s)	1405
BstX2I	RGATCY	2 cut(s)	267, 416
BstXI	CCANNNNNNTGG	1 cut(s)	1443
BstYI	RGATCY	2 cut(s)	267, 416
Bsu36I	CCTNAGG	1 cut(s)	693
BsuRI	GGCC	6 cut(s)	327, 516, 689, 884, 1244, 1339
BtgI	CCRYGG	1 cut(s)	258
BtsCI	GGATG	3 cut(s)	872, 1274, 1522
BtsI	GCAGTG	3 cut(s)	425, 732, 1179
BtsIMutI	CAGTG	6 cut(s)	425, 450, 732, 1002, 1078, 1179
BveI	ACCTGC	2 cut(s)	182, 586
Cac8I	GCNNGC	5 cut(s)	202, 325, 391, 716, 957
CaiI	CAGNNNCTG	1 cut(s)	197
Cfr13I	GGNCC	8 cut(s)	194, 326, 338, 688, 821, 883, 1337, 1538
Cfr9I	CCCGGG	1 cut(s)	1334
CsiI	ACCWGGT	1 cut(s)	239
Csp6I	GTAC	4 cut(s)	399, 508, 1260, 1449
CviAII	CATG	4 cut(s)	259, 351, 505, 983
CviQI	GTAC	4 cut(s)	399, 508, 1260, 1449
DdeI	CTNAG	5 cut(s)	89, 319, 402, 693, 1317
DpnI	GATC	4 cut(s)	269, 418, 924, 1295
DpnII	GATC	4 cut(s)	267, 416, 922, 1293
EaeI	YGGCCR	1 cut(s)	1242
Eam1104I	CTCTTC	3 cut(s)	88, 152, 280
EarI	CTCTTC	3 cut(s)	88, 152, 280
Eco130I	CCWWGG	2 cut(s)	258, 1108
Eco24I	GRGCYC	1 cut(s)	384
Eco31I	GGTCTC	2 cut(s)	365, 1098
Eco47I	GGWCC	4 cut(s)	194, 338, 821, 1538
Eco81I	CCTNAGG	1 cut(s)	693
Eco88I	CYCGRG	1 cut(s)	1334
EcoO109I	RGGNCCY	3 cut(s)	194, 338, 1538
EcoRII	CCWGG	2 cut(s)	239, 1203
EcoT14I	CCWWGG	2 cut(s)	258, 1108
EcoT22I	ATGCAT	3 cut(s)	25, 506, 979
EcoT38I	GRGCYC	1 cut(s)	384
ErhI	CCWWGG	2 cut(s)	258, 1108
FaeI	CATG	4 cut(s)	262, 354, 508, 986
FalI	AAGNNNNNCTT	2 cut(s)	703, 735
FaqI	GGGAC	5 cut(s)	18, 324, 469, 622, 1221
FatI	CATG	4 cut(s)	258, 350, 504, 982
FauNDI	CATATG	3 cut(s)	409, 587, 1256
Fnu4HI	GCNGC	5 cut(s)	312, 777, 780, 1077, 1188
FokI	GGATG	3 cut(s)	879, 1281, 1529
FriOI	GRGCYC	1 cut(s)	384
Fsp4HI	GCNGC	5 cut(s)	312, 777, 780, 1077, 1188
FspBI	CTAG	2 cut(s)	177, 939
GluI	GCNGC	5 cut(s)	312, 777, 780, 1077, 1188
GsuI	CTGGAG	2 cut(s)	1026, 1465
HaeIII	GGCC	6 cut(s)	327, 516, 689, 884, 1244, 1339
HapII	CCGG	2 cut(s)	153, 1335
Hin1II	CATG	4 cut(s)	262, 354, 508, 986
HinfI	GANTC	4 cut(s)	44, 156, 730, 1114
HpaII	CCGG	2 cut(s)	153, 1335
HphI	GGTGA	4 cut(s)	142, 229, 709, 1136
Hpy166II	GTNNAC	2 cut(s)	672, 1055
Hpy188I	TCNGA	5 cut(s)	35, 92, 1268, 1293, 1494
Hpy188III	TCNNGA	4 cut(s)	283, 902, 1101, 1219
Hpy8I	GTNNAC	2 cut(s)	672, 1055
Hpy99I	CGWCG	1 cut(s)	139
HpyAV	CCTTC	2 cut(s)	1173, 1393
HpyCH4III	ACNGT	2 cut(s)	613, 654
HpyCH4IV	ACGT	1 cut(s)	666
HpyF10VI	GCNNNNNNNGC	4 cut(s)	197, 320, 1359, 1469
HpyF3I	CTNAG	5 cut(s)	89, 319, 402, 693, 1317
HpySE526I	ACGT	1 cut(s)	666
Hsp92II	CATG	4 cut(s)	262, 354, 508, 986
KflI	GGGWCCC	1 cut(s)	338
Kzo9I	GATC	4 cut(s)	267, 416, 922, 1293
LguI	GCTCTTC	1 cut(s)	280
LmnI	GCTCC	3 cut(s)	806, 944, 1007
Lsp1109I	GCAGC	5 cut(s)	298, 763, 791, 1063, 1199
LweI	GCATC	8 cut(s)	10, 32, 356, 668, 763, 852, 964, 1507
MabI	ACCWGGT	1 cut(s)	239
MaeI	CTAG	2 cut(s)	177, 939
MaeII	ACGT	1 cut(s)	666
MaeIII	GTNAC	3 cut(s)	74, 697, 1397
MalI	GATC	4 cut(s)	269, 418, 924, 1295
MboI	GATC	4 cut(s)	267, 416, 922, 1293
MboII	GAAGA	7 cut(s)	105, 139, 267, 806, 1036, 1333, 1405
MflI	RGATCY	2 cut(s)	267, 416
MhlI	GDGCHC	1 cut(s)	384
MluCI	AATT	6 cut(s)	963, 1062, 1140, 1354, 1437, 1456
MmeI	TCCRAC	4 cut(s)	229, 583, 1191, 1494
Mph1103I	ATGCAT	3 cut(s)	25, 506, 979
MroXI	GAANNNNTTC	2 cut(s)	1325, 1529
MseI	TTAA	3 cut(s)	63, 1358, 1579
MslI	CAYNNNNRTG	2 cut(s)	352, 487
MspI	CCGG	2 cut(s)	153, 1335
MspR9I	CCNGG	4 cut(s)	241, 1205, 1335, 1336
Mva1269I	GAATGC	2 cut(s)	897, 1197
MvaI	CCWGG	2 cut(s)	241, 1205
MwoI	GCNNNNNNNGC	4 cut(s)	197, 320, 1359, 1469
NciI	CCSGG	2 cut(s)	1335, 1336
NcoI	CCATGG	1 cut(s)	258
NdeI	CATATG	3 cut(s)	409, 587, 1256
NdeII	GATC	4 cut(s)	267, 416, 922, 1293
NlaIII	CATG	4 cut(s)	262, 354, 508, 986
NlaIV	GGNNCC	4 cut(s)	328, 339, 340, 690
NmuCI	GTSAC	1 cut(s)	697
NsiI	ATGCAT	3 cut(s)	25, 506, 979
NspI	RCATGY	1 cut(s)	508
OliI	CACNNNNGTG	1 cut(s)	487
PciSI	GCTCTTC	1 cut(s)	280
PctI	GAATGC	2 cut(s)	897, 1197
PdmI	GAANNNNTTC	2 cut(s)	1325, 1529
PfeI	GAWTC	4 cut(s)	44, 156, 730, 1114
PflMI	CCANNNNNTGG	1 cut(s)	591
PkrI	GCNGC	5 cut(s)	313, 778, 781, 1078, 1189
Ppu21I	YACGTR	1 cut(s)	667
PpuMI	RGGWCCY	3 cut(s)	194, 338, 1538
PsiI	TTATAA	1 cut(s)	623
Psp5II	RGGWCCY	3 cut(s)	194, 338, 1538
Psp6I	CCWGG	2 cut(s)	239, 1203
PspGI	CCWGG	2 cut(s)	239, 1203
PspN4I	GGNNCC	4 cut(s)	328, 339, 340, 690
PspPI	GGNCC	8 cut(s)	194, 326, 338, 688, 821, 883, 1337, 1538
PspPPI	RGGWCCY	3 cut(s)	194, 338, 1538
PstI	CTGCAG	1 cut(s)	781
PstNI	CAGNNNCTG	1 cut(s)	197
PsuI	RGATCY	2 cut(s)	267, 416
RsaI	GTAC	4 cut(s)	400, 509, 1261, 1450
RsaNI	GTAC	4 cut(s)	399, 508, 1260, 1449
RseI	CAYNNNNRTG	2 cut(s)	352, 487
SapI	GCTCTTC	1 cut(s)	280
SaqAI	TTAA	3 cut(s)	63, 1358, 1579
SatI	GCNGC	5 cut(s)	312, 777, 780, 1077, 1188
Sau3AI	GATC	4 cut(s)	267, 416, 922, 1293
Sau96I	GGNCC	8 cut(s)	194, 326, 338, 688, 821, 883, 1337, 1538
ScrFI	CCNGG	4 cut(s)	241, 1205, 1335, 1336
SduI	GDGCHC	1 cut(s)	384
SexAI	ACCWGGT	1 cut(s)	239
SfaNI	GCATC	8 cut(s)	10, 32, 356, 668, 763, 852, 964, 1507
SfcI	CTRYAG	1 cut(s)	777
SinI	GGWCC	4 cut(s)	194, 338, 821, 1538
SmaI	CCCGGG	1 cut(s)	1336
SmiMI	CAYNNNNRTG	2 cut(s)	352, 487
SmlI	CTYRAG	1 cut(s)	368
SmoI	CTYRAG	1 cut(s)	368
Sse9I	AATT	6 cut(s)	963, 1062, 1140, 1354, 1437, 1456
SspMI	CTAG	2 cut(s)	177, 939
StyD4I	CCNGG	4 cut(s)	239, 1203, 1333, 1334
StyI	CCWWGG	2 cut(s)	258, 1108
TaaI	ACNGT	2 cut(s)	613, 654
TaiI	ACGT	1 cut(s)	669
TaqI	TCGA	2 cut(s)	134, 681
TaqII	GACCGA	1 cut(s)	1381
TasI	AATT	6 cut(s)	963, 1062, 1140, 1354, 1437, 1456
TatI	WGTACW	3 cut(s)	507, 1259, 1448
TfiI	GAWTC	4 cut(s)	44, 156, 730, 1114
Tru1I	TTAA	3 cut(s)	63, 1358, 1579
Tru9I	TTAA	3 cut(s)	63, 1358, 1579
TscAI	CASTG	6 cut(s)	432, 457, 732, 1009, 1078, 1179
TseFI	GTSAC	1 cut(s)	697
TseI	GCWGC	5 cut(s)	311, 776, 779, 1076, 1187
Tsp45I	GTSAC	1 cut(s)	697
TspDTI	ATGAA	3 cut(s)	747, 971, 1029
TspMI	CCCGGG	1 cut(s)	1334
TspRI	CASTG	6 cut(s)	432, 457, 732, 1009, 1078, 1179
Van91I	CCANNNNNTGG	1 cut(s)	591
VpaK11BI	GGWCC	4 cut(s)	194, 338, 821, 1538
XapI	RAATTY	2 cut(s)	963, 1140
XceI	RCATGY	1 cut(s)	508
XmaI	CCCGGG	1 cut(s)	1334
XmnI	GAANNNNTTC	2 cut(s)	1325, 1529
XspI	CTAG	2 cut(s)	177, 939
Zsp2I	ATGCAT	3 cut(s)	25, 506, 979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.