Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002606

Physical Location & Seq

Genomic Coordinates Reverse (-)

50798179 .. 50800657

Gene Structure 2479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGCCAAATCGGAGAGACGATTATGAAGAAGAAGAGGAGAGCGAGATGCGGGAGGAGCGAAGGGCCAATTCGAAGCGGGGGAGATTGAATTCTGATGAGATTGAGATCCAGAAGCGGAGAGGGCGAGGGTCGAATTCGAAAAAGAGGAAATTGAAAACGGTTGCGGAGGAGGAGGAAGAAGAAGAAGGCGGTGGTGGAAGGCCTTTTAAGTCGGTGTTTGTGGATGATGAGGCTATAGAGGATGAAGATGAGGAGGAGGAGGAAGACGATGATGGTGAATTGGATGGGTTTATTGTTAATGAACCGGAGTTTGATAACGAACCTGATGAAGTTGAACATGATGGTGGCGGTGGGGGAAGGATGGGGTTTGTCTTGCCGGAGGAAGAAGAGGAGGAAGATATTGATGAGTTTGAAAGAAGGGTTCAAGACAGATTTAGGGATGTTCATGTGGAAGAATATGAGGATGATACGGAGGTTGGACAGCAAGCTCTCATACCCGGTGTGAAGGACCCGAAATTGTGGTTGGTGAAGTGTGCCATTGGTAAAGAGAGAGAGGTAGCGGCTTGTCTAATGCAGAAGTGTATTGATAGTCCTGGAGAATTGCAGATCATGTCTGCCATTGCTTTGGATCACTTGAAAAGCTTCATATATGTTGAAGCTTACAAAGAAGCCCATGTGAGGGAAGCTTGCAAAGGTCTGAGGTATGTAATTCTGCAGAAAATAATGCTTGTTCCTATTAAAGAGATGATTGATGTGCTATCATGTGAAAGCAAGAGCGTTGTAAATGATAAATGGGTTAGGATTAAGACGGGAGTATATAAAGGGGACCTTGCCAAGGTTGTGGGGCATGTCCCGGGGAGACAGCAAGTTAGAGTAAAGTTAATTCCAAGGGTTGATTTACAAGCTCTTGCAAAAGGTGCAGAATCATCGAAGAAGAAGGAATCTGGTGCACGTCCTGATCGTGTTCCTGCACTTCTTAGGAACATGAACCTAGTTAGACAGCTGGGTGTACGAGTACAGTCCATGCGAGATCCATTGGCACGTGGTTATATTGAGAAGATTGATGGCTTATCTGGGATGATCTTTAAAGATGGTTTCCATCTTAAAGTTGTTTCTGATAAAAGTATAAAAGAGGCAAAACCCTCCTTGCAAGAACTTGAAGAATTCCAGGAACTTGATGGTGATGGAGATCATACAATTCCAAATAGAAAGAAAGGCGAAAGCTTTATGAAGGGCGATGCAGTTATTGTTACGGAGGGAGATCTGAGAAACTTGGTGGGACGGGTTGAGAAAGTTGAGTTAGGGACTGTTCATATCAAAGCGGAAATGGATGGCCTCCCGGAAACCGTTGCCATCAATCAAACAGCACTTCAGAAATGCTTTAAAGAAGGGCAGCATGTGAAGGTTGTTAGCGGTAGTCAACAAGGAGCAACTGGCATGGTTGTTAAGGTTGATCAGCAGAAGCAGTTGATCACCATTTTATCTGATGCAACCAATGAAGCTATCTGCATGTTCTCTGATCATGCTGTGGAGAGTCCTGAAGTGAATAATGGTGATACAATGGGCGACTCCCACTGCTTAAGGTATCACAAAATCCCTAGTCAAAGTCCGAGGTTTTCTGGAGGTGCAAGAAGGCATGATGGGCAGGATGGTTTTGGTAAAGGGAGCCGAGTAAAGTTCCGTCTAGGTCCCTATAAAGGCTGCAGGGGGCGTGTTGTGGAGGTTAAAGGATCAAATGTAAGGGTTGAACTAGAGTCCCAGATGAAAACTGTTGTTGTTGATCGTCTACATTGTATTTCAGAATCAGGTAATGTTGCTGCTGCAGTTACAACACCATATCGCTCTGGTTGTGAGACCCCAATGCCTTACATGAGGACTCCTATGAGAGATCCTGGAGCAACGTCAATGCCTTACATGACAACTCCCATGAGAGATCCTGGAGCATCCCCAATGCGTTATATGACGACTCCCTACATGATGACTCCCAGAAGAGATTACCCCCGAGCAACACCAATACATGGTGGCATGAGAACTCCATCTATGACTCCCATGAGAGATCCCCGAGCAACACCGATACATGGTGGCATGAGGACCCCTCCTATATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016071 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032044 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KOW Spt5-NGN Spt5_N

Protein Analysis

702

Amino Acids

78.72

Weight (kDa)

5.53

Isoelectric Point (pI)

50.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Spt5-NGN	PF03439	172 - 253	2.3e-24	Early transcription elongation factor of RNA pol II, NGN section
KOW1_SPT5	PF23042	261 - 389	1.4e-27	Transcription elongation factor SPT5, KOW1 domain
KOW2_Spt5	PF23284	411 - 460	5.1e-16	Transcription elongation factor SPT5, second KOW domain
KOW5_SPT5	PF23290	555 - 595	2.3e-12	Transcription elongation factor SPT5, fifth KOW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002606)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08350
fragaria_vesca	FvH4_2g14770 FvH4_2g14770 FvH4_2g14770 FvH4_7g15891 FvH4_7g15900
malus_domestica	MD01G1075900.v1.1 MD05G1013100.v1.1 MD10G1013600.v1.1
prunus_persica	Prupe.2G047200_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1 Prupe.8G018000_v2.0.a1
pyrus_communis	pycom01g10480 pycom05g00760 pycom10g00830
rosa_chinensis	RchiOBHm_Chr1g0358771 RchiOBHm_Chr6g0277331
rosa_laevigata	RLG00000013309 RLG00000015056 RLG00000027924 RLG00000027930 RLG00000027931
rosa_multiflora	Rmu_co8026512.1_g000001 Rmu_sc0000030.1_g000027 Rmu_sc0017529.1_g000003 Rmu_sc0031713.1_g000002
rosa_roxburghii	Rroxscaffold_4G00297640 Rroxscaffold_7G00191440
rosa_rugosa	Rorug01G0264800 Rorug01G0265100 Rorug06G0107200
rosa_samantha	Rh1AG279200 Rh1BG245800 Rh1CG263000 Rh1DG274100 Rh6BG222000 Rh6DG215000
rosa_wichuraiana	Rw1G024810 Rw6G019000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2018
AccI	GTMKAC	1 cut(s)	1786
AciI	CCGC	9 cut(s)	49, 76, 115, 164, 189, 348, 560, 1322, 1413
AclWI	GGATC	7 cut(s)	100, 636, 1025, 1738, 1883, 1928, 2051
AcsI	RAATTY	3 cut(s)	88, 133, 1163
AcuI	CTGAAG	2 cut(s)	1355, 1560
AcvI	CACGTG	1 cut(s)	1043
AfaI	GTAC	2 cut(s)	1011, 1017
AfiI	CCNNNNNNNGG	6 cut(s)	678, 679, 835, 1697, 2018, 2078
AflII	CTTAAG	1 cut(s)	1579
AgsI	TTSAA	9 cut(s)	88, 154, 335, 413, 425, 637, 656, 1160, 1748
AjiI	CACGTC	1 cut(s)	953
AjnI	CCWGG	4 cut(s)	592, 1167, 1891, 1936
AjuI	GAANNNNNNNTTGG	2 cut(s)	506, 538
AluBI	AGCT	8 cut(s)	488, 642, 659, 686, 905, 1003, 1224, 1502
AluI	AGCT	8 cut(s)	488, 642, 659, 686, 905, 1003, 1224, 1502
Alw21I	GWGCWC	1 cut(s)	952
Alw26I	GTCTC	3 cut(s)	9, 853, 1847
Alw44I	GTGCAC	1 cut(s)	948
AlwI	GGATC	7 cut(s)	100, 636, 1025, 1738, 1883, 1928, 2051
Ama87I	CYCGRG	3 cut(s)	853, 2001, 2061
AoxI	GGCC	3 cut(s)	63, 200, 1333
ApaLI	GTGCAC	1 cut(s)	948
ApeKI	GCWGC	4 cut(s)	1393, 1701, 1817, 1820
ApoI	RAATTY	3 cut(s)	88, 133, 1163
Asp700I	GAANNNNTTC	1 cut(s)	641
AspS9I	GGNCC	5 cut(s)	63, 508, 826, 1688, 2091
AsuC2I	CCSGG	4 cut(s)	498, 854, 855, 1340
AsuHPI	GGTGA	5 cut(s)	287, 538, 1193, 1465, 1565
AsuII	TTCGAA	2 cut(s)	71, 137
AvaI	CYCGRG	3 cut(s)	853, 2001, 2061
AvaII	GGWCC	4 cut(s)	508, 826, 1688, 2091
BaeGI	GKGCMC	1 cut(s)	952
BaeI	ACNNNNGTAYC	2 cut(s)	459, 492
BbrPI	CACGTG	1 cut(s)	1043
BbsI	GAAGAC	1 cut(s)	270
Bbv12I	GWGCWC	1 cut(s)	952
BbvI	GCAGC	4 cut(s)	1405, 1688, 1804, 1807
BcgI	CGANNNNNNTGC	2 cut(s)	909, 943
BciT130I	CCWGG	4 cut(s)	594, 1169, 1893, 1938
BclI	TGATCA	3 cut(s)	1453, 1470, 1519
BcnI	CCSGG	4 cut(s)	498, 854, 855, 1340
BcoDI	GTCTC	3 cut(s)	9, 853, 1847
BfaI	CTAG	4 cut(s)	992, 1599, 1685, 1751
BfmI	CTRYAG	4 cut(s)	234, 713, 1702, 1821
BfrI	CTTAAG	1 cut(s)	1579
BglII	AGATCT	1 cut(s)	1261
BisI	GCNGC	5 cut(s)	561, 1394, 1702, 1818, 1821
BlsI	GCNGC	5 cut(s)	562, 1395, 1703, 1819, 1822
Bme1390I	CCNGG	8 cut(s)	498, 594, 854, 855, 1169, 1340, 1893, 1938
Bme18I	GGWCC	4 cut(s)	508, 826, 1688, 2091
BmeT110I	CYCGRG	3 cut(s)	853, 2001, 2061
BmgBI	CACGTC	1 cut(s)	953
BmgT120I	GGNCC	5 cut(s)	63, 508, 826, 1688, 2091
BmiI	GGNNCC	5 cut(s)	510, 827, 1667, 1690, 2093
BmrFI	CCNGG	8 cut(s)	498, 594, 854, 855, 1169, 1340, 1893, 1938
BmsI	GCATC	4 cut(s)	36, 1228, 1477, 1952
BpiI	GAAGAC	1 cut(s)	270
BplI	GAGNNNNNCTC	1 cut(s)	2080
BpmI	CTGGAG	4 cut(s)	615, 1641, 1914, 1959
Bpu14I	TTCGAA	2 cut(s)	71, 137
BpuMI	CCSGG	4 cut(s)	498, 854, 855, 1340
BsaAI	YACGTR	1 cut(s)	1043
BsaBI	GATNNNNATC	2 cut(s)	104, 1188
BsaI	GGTCTC	1 cut(s)	1847
BsaJI	CCNNGG	5 cut(s)	834, 853, 854, 887, 1610
BsaWI	WCCGGW	1 cut(s)	304
Bsc4I	CCNNNNNNNGG	6 cut(s)	678, 679, 835, 1697, 2018, 2078
Bse1I	ACTGG	1 cut(s)	1438
Bse3DI	GCAATG	1 cut(s)	618
Bse8I	GATNNNNATC	2 cut(s)	104, 1188
BseBI	CCWGG	4 cut(s)	594, 1169, 1893, 1938
BseDI	CCNNGG	5 cut(s)	834, 853, 854, 887, 1610
BseJI	GATNNNNATC	2 cut(s)	104, 1188
BseLI	CCNNNNNNNGG	6 cut(s)	678, 679, 835, 1697, 2018, 2078
BseMI	GCAATG	1 cut(s)	618
BseMII	CTCAG	2 cut(s)	689, 1256
BseNI	ACTGG	1 cut(s)	1438
BseRI	GAGGAG	8 cut(s)	50, 68, 182, 185, 266, 269, 272, 404
BseSI	GKGCMC	1 cut(s)	952
BseXI	GCAGC	4 cut(s)	1405, 1688, 1804, 1807
BseYI	CCCAGC	1 cut(s)	1003
BsgI	GTGCAG	2 cut(s)	939, 954
BshFI	GGCC	3 cut(s)	65, 202, 1335
BsiHKAI	GWGCWC	1 cut(s)	952
BsiHKCI	CYCGRG	3 cut(s)	853, 2001, 2061
BsiSI	CCGG	5 cut(s)	305, 377, 498, 854, 1340
BslFI	GGGAC	6 cut(s)	836, 839, 1293, 1318, 1674, 1741
BslI	CCNNNNNNNGG	6 cut(s)	678, 679, 835, 1697, 2018, 2078
BsmAI	GTCTC	3 cut(s)	9, 853, 1847
BsmBI	CGTCTC	1 cut(s)	9
BsmFI	GGGAC	6 cut(s)	836, 839, 1293, 1318, 1674, 1741
BsnI	GGCC	3 cut(s)	65, 202, 1335
Bso31I	GGTCTC	1 cut(s)	1847
BsoBI	CYCGRG	3 cut(s)	853, 2001, 2061
Bsp119I	TTCGAA	2 cut(s)	71, 137
Bsp1286I	GDGCHC	1 cut(s)	952
BspACI	CCGC	9 cut(s)	49, 76, 115, 164, 189, 348, 560, 1322, 1413
BspANI	GGCC	3 cut(s)	65, 202, 1335
BspCNI	CTCAG	2 cut(s)	690, 1257
BspLI	GGNNCC	5 cut(s)	510, 827, 1667, 1690, 2093
BspMAI	CTGCAG	3 cut(s)	717, 1706, 1825
BspPI	GGATC	7 cut(s)	100, 636, 1025, 1738, 1883, 1928, 2051
BspT104I	TTCGAA	2 cut(s)	71, 137
BspTI	CTTAAG	1 cut(s)	1579
BspTNI	GGTCTC	1 cut(s)	1847
BsrDI	GCAATG	1 cut(s)	618
BsrI	ACTGG	1 cut(s)	1438
BssECI	CCNNGG	5 cut(s)	834, 853, 854, 887, 1610
BssT1I	CCWWGG	2 cut(s)	834, 887
Bst2UI	CCWGG	4 cut(s)	594, 1169, 1893, 1938
Bst4CI	ACNGT	5 cut(s)	160, 1020, 1309, 1348, 1771
Bst6I	CTCTTC	3 cut(s)	27, 381, 1984
BstAFI	CTTAAG	1 cut(s)	1579
BstAPI	GCANNNNNTGC	1 cut(s)	917
BstBAI	YACGTR	1 cut(s)	1043
BstBI	TTCGAA	2 cut(s)	71, 137
BstC8I	GCNNGC	2 cut(s)	486, 688
BstDEI	CTNAG	3 cut(s)	698, 977, 1265
BstENI	CCTNNNNNAGG	1 cut(s)	833
BstMAI	GTCTC	3 cut(s)	9, 853, 1847
BstMWI	GCNNNNNNNGC	4 cut(s)	55, 121, 917, 1642
BstNI	CCWGG	4 cut(s)	594, 1169, 1893, 1938
BstNSI	RCATGY	3 cut(s)	851, 1400, 1513
BstSCI	CCNGG	8 cut(s)	496, 592, 852, 853, 1167, 1338, 1891, 1936
BstSFI	CTRYAG	4 cut(s)	234, 713, 1702, 1821
BstSLI	GKGCMC	1 cut(s)	952
BstV1I	GCAGC	4 cut(s)	1405, 1688, 1804, 1807
BstV2I	GAAGAC	1 cut(s)	270
BstX2I	RGATCY	6 cut(s)	105, 1030, 1261, 1888, 1933, 2056
BstXI	CCANNNNNNTGG	2 cut(s)	625, 841
BstYI	RGATCY	6 cut(s)	105, 1030, 1261, 1888, 1933, 2056
BsuRI	GGCC	3 cut(s)	65, 202, 1335
BtgZI	GCGATG	1 cut(s)	1251
BtrI	CACGTC	1 cut(s)	953
BtsI	GCAGTG	1 cut(s)	1573
BtsIMutI	CAGTG	1 cut(s)	1573
Cac8I	GCNNGC	2 cut(s)	486, 688
Cfr13I	GGNCC	5 cut(s)	63, 508, 826, 1688, 2091
Cfr9I	CCCGGG	1 cut(s)	853
Csp6I	GTAC	2 cut(s)	1010, 1016
CviQI	GTAC	2 cut(s)	1010, 1016
DdeI	CTNAG	3 cut(s)	698, 977, 1265
DraI	TTTAAA	2 cut(s)	1087, 1384
Eam1104I	CTCTTC	3 cut(s)	27, 381, 1984
EarI	CTCTTC	3 cut(s)	27, 381, 1984
Eco130I	CCWWGG	2 cut(s)	834, 887
Eco147I	AGGCCT	1 cut(s)	202
Eco31I	GGTCTC	1 cut(s)	1847
Eco47I	GGWCC	4 cut(s)	508, 826, 1688, 2091
Eco57I	CTGAAG	2 cut(s)	1355, 1560
Eco72I	CACGTG	1 cut(s)	1043
Eco88I	CYCGRG	3 cut(s)	853, 2001, 2061
EcoNI	CCTNNNNNAGG	1 cut(s)	833
EcoO109I	RGGNCCY	4 cut(s)	508, 826, 1688, 2091
EcoRI	GAATTC	3 cut(s)	88, 133, 1163
EcoRII	CCWGG	4 cut(s)	592, 1167, 1891, 1936
EcoT14I	CCWWGG	2 cut(s)	834, 887
ErhI	CCWWGG	2 cut(s)	834, 887
Esp3I	CGTCTC	1 cut(s)	9
FalI	AAGNNNNNCTT	2 cut(s)	813, 845
FaqI	GGGAC	6 cut(s)	836, 839, 1293, 1318, 1674, 1741
FauI	CCCGC	2 cut(s)	42, 69
FbaI	TGATCA	3 cut(s)	1453, 1470, 1519
FblI	GTMKAC	1 cut(s)	1786
Fnu4HI	GCNGC	5 cut(s)	561, 1394, 1702, 1818, 1821
Fsp4HI	GCNGC	5 cut(s)	561, 1394, 1702, 1818, 1821
FspBI	CTAG	4 cut(s)	992, 1599, 1685, 1751
GluI	GCNGC	5 cut(s)	561, 1394, 1702, 1818, 1821
GsaI	CCCAGC	1 cut(s)	1007
GsuI	CTGGAG	4 cut(s)	615, 1641, 1914, 1959
HaeIII	GGCC	3 cut(s)	65, 202, 1335
HapII	CCGG	5 cut(s)	305, 377, 498, 854, 1340
HincII	GTYRAC	1 cut(s)	1421
HindII	GTYRAC	1 cut(s)	1421
HindIII	AAGCTT	4 cut(s)	640, 657, 684, 1222
HpaII	CCGG	5 cut(s)	305, 377, 498, 854, 1340
HphI	GGTGA	5 cut(s)	287, 538, 1193, 1465, 1565
Hpy166II	GTNNAC	4 cut(s)	950, 1010, 1421, 1787
Hpy188III	TCNNGA	5 cut(s)	109, 425, 956, 1538, 1620
Hpy8I	GTNNAC	4 cut(s)	950, 1010, 1421, 1787
HpyCH4III	ACNGT	5 cut(s)	160, 1020, 1309, 1348, 1771
HpyCH4IV	ACGT	3 cut(s)	952, 1042, 1901
HpyF10VI	GCNNNNNNNGC	4 cut(s)	55, 121, 917, 1642
HpyF3I	CTNAG	3 cut(s)	698, 977, 1265
HpySE526I	ACGT	3 cut(s)	952, 1042, 1901
Ksp22I	TGATCA	3 cut(s)	1453, 1470, 1519
LmnI	GCTCC	5 cut(s)	55, 1427, 1665, 1895, 1940
Lsp1109I	GCAGC	4 cut(s)	1405, 1688, 1804, 1807
LweI	GCATC	4 cut(s)	36, 1228, 1477, 1952
MaeI	CTAG	4 cut(s)	992, 1599, 1685, 1751
MaeII	ACGT	3 cut(s)	952, 1042, 1901
MaeIII	GTNAC	2 cut(s)	1249, 1825
MflI	RGATCY	6 cut(s)	105, 1030, 1261, 1888, 1933, 2056
MhlI	GDGCHC	1 cut(s)	952
MlyI	GAGTC	7 cut(s)	1543, 1562, 1763, 1870, 1960, 1975, 2038
MmeI	TCCRAC	1 cut(s)	457
MroXI	GAANNNNTTC	1 cut(s)	641
MslI	CAYNNNNRTG	1 cut(s)	342
MspA1I	CMGCKG	1 cut(s)	1003
MspCI	CTTAAG	1 cut(s)	1579
MspI	CCGG	5 cut(s)	305, 377, 498, 854, 1340
MspR9I	CCNGG	8 cut(s)	498, 594, 854, 855, 1169, 1340, 1893, 1938
MvaI	CCWGG	4 cut(s)	594, 1169, 1893, 1938
MwoI	GCNNNNNNNGC	4 cut(s)	55, 121, 917, 1642
NciI	CCSGG	4 cut(s)	498, 854, 855, 1340
NlaIV	GGNNCC	5 cut(s)	510, 827, 1667, 1690, 2093
NmeAIII	GCCGAG	1 cut(s)	1694
NspI	RCATGY	3 cut(s)	851, 1400, 1513
NspV	TTCGAA	2 cut(s)	71, 137
PceI	AGGCCT	1 cut(s)	202
PcsI	WCGNNNNNNNCGW	1 cut(s)	958
PdmI	GAANNNNTTC	1 cut(s)	641
PfeI	GAWTC	3 cut(s)	923, 941, 1802
PflMI	CCANNNNNTGG	1 cut(s)	2018
PfoI	TCCNGGA	5 cut(s)	592, 1167, 1338, 1891, 1936
PkrI	GCNGC	5 cut(s)	562, 1395, 1703, 1819, 1822
PleI	GAGTC	7 cut(s)	1542, 1562, 1762, 1870, 1960, 1975, 2038
PmaCI	CACGTG	1 cut(s)	1043
PmlI	CACGTG	1 cut(s)	1043
PpsI	GAGTC	7 cut(s)	1542, 1562, 1762, 1870, 1960, 1975, 2038
Ppu21I	YACGTR	1 cut(s)	1043
PpuMI	RGGWCCY	4 cut(s)	508, 826, 1688, 2091
Psp5II	RGGWCCY	4 cut(s)	508, 826, 1688, 2091
Psp6I	CCWGG	4 cut(s)	592, 1167, 1891, 1936
PspCI	CACGTG	1 cut(s)	1043
PspFI	CCCAGC	1 cut(s)	1003
PspGI	CCWGG	4 cut(s)	592, 1167, 1891, 1936
PspN4I	GGNNCC	5 cut(s)	510, 827, 1667, 1690, 2093
PspPI	GGNCC	5 cut(s)	63, 508, 826, 1688, 2091
PspPPI	RGGWCCY	4 cut(s)	508, 826, 1688, 2091
PstI	CTGCAG	3 cut(s)	717, 1706, 1825
PsuI	RGATCY	6 cut(s)	105, 1030, 1261, 1888, 1933, 2056
PvuII	CAGCTG	1 cut(s)	1003
RsaI	GTAC	2 cut(s)	1011, 1017
RsaNI	GTAC	2 cut(s)	1010, 1016
RseI	CAYNNNNRTG	1 cut(s)	342
SatI	GCNGC	5 cut(s)	561, 1394, 1702, 1818, 1821
Sau96I	GGNCC	5 cut(s)	63, 508, 826, 1688, 2091
SchI	GAGTC	7 cut(s)	1543, 1562, 1763, 1870, 1960, 1975, 2038
ScrFI	CCNGG	8 cut(s)	498, 594, 854, 855, 1169, 1340, 1893, 1938
SduI	GDGCHC	1 cut(s)	952
SfaNI	GCATC	4 cut(s)	36, 1228, 1477, 1952
SfcI	CTRYAG	4 cut(s)	234, 713, 1702, 1821
SfuI	TTCGAA	2 cut(s)	71, 137
SinI	GGWCC	4 cut(s)	508, 826, 1688, 2091
SmaI	CCCGGG	1 cut(s)	855
SmiMI	CAYNNNNRTG	1 cut(s)	342
SmlI	CTYRAG	1 cut(s)	1579
SmoI	CTYRAG	1 cut(s)	1579
SseBI	AGGCCT	1 cut(s)	202
SsiI	CCGC	9 cut(s)	49, 76, 115, 164, 189, 348, 560, 1322, 1413
SspMI	CTAG	4 cut(s)	992, 1599, 1685, 1751
StuI	AGGCCT	1 cut(s)	202
StyD4I	CCNGG	8 cut(s)	496, 592, 852, 853, 1167, 1338, 1891, 1936
StyI	CCWWGG	2 cut(s)	834, 887
TaaI	ACNGT	5 cut(s)	160, 1020, 1309, 1348, 1771
TaiI	ACGT	3 cut(s)	955, 1045, 1904
TaqI	TCGA	4 cut(s)	71, 131, 137, 929
TatI	WGTACW	1 cut(s)	1015
TauI	GCSGC	1 cut(s)	563
TfiI	GAWTC	3 cut(s)	923, 941, 1802
TscAI	CASTG	1 cut(s)	1580
TseI	GCWGC	4 cut(s)	1393, 1701, 1817, 1820
TspGWI	ACGGA	3 cut(s)	485, 1268, 1670
TspMI	CCCGGG	1 cut(s)	853
TspRI	CASTG	1 cut(s)	1580
Van91I	CCANNNNNTGG	1 cut(s)	2018
Vha464I	CTTAAG	1 cut(s)	1579
VneI	GTGCAC	1 cut(s)	948
VpaK11BI	GGWCC	4 cut(s)	508, 826, 1688, 2091
XagI	CCTNNNNNAGG	1 cut(s)	833
XapI	RAATTY	3 cut(s)	88, 133, 1163
XceI	RCATGY	3 cut(s)	851, 1400, 1513
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1175
XmaI	CCCGGG	1 cut(s)	853
XmiI	GTMKAC	1 cut(s)	1786
XmnI	GAANNNNTTC	1 cut(s)	641
XspI	CTAG	4 cut(s)	992, 1599, 1685, 1751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.