Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002046

Physical Location & Seq

Genomic Coordinates Reverse (-)

64644745 .. 64649142

Gene Structure 4398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGTTCTCCTTTGCCATCAATTTGCCCACCCAAAGGTTCCTTCAGGCTCAGAGCAAGGTCGGCGTACTAGCATGGATCTCCTTTATGGCTCCAGGAGTGAATGGTGCAGCTGTAGCTTATAATATCACATTTTGGGAAGTTGCAGTTGGTCAATTTGTGTATGCTGTGTTTTTGTGCAAGGAGAGTTGGAATGGATTTTCGTGGTTGGCGTTTAAAGATACTTGGGCTTTTGCTAGGCTGTCCGTTGCCTCATGTATGATGTTTTGCCTAGAGTCTTGGTATACTATGAGTCTTAACACTCTCGCCAGTCAACTTAAAAATGCAGTCATTGCTCTTGGTTCCTTTTCTATATGCTCAAACATTCACAGTGGGGAAATCATGTTCTTTGCTGGAATAAATTCTGCTATGAGCATTCGAGTCTCAAATGAACTTGGGATGGGGCACCCAAGAGCGGCCAAATACTCCATCTGCGTTGCAGTCTTGCAATCTCTCCTCATTGGGATTGTGTCTATGATTTTTATCTTCATAAGTAGAGACTACATTGCCATCGTTTTCACGAATAGCAAAGTTATGCAACAAGCTGTTGCTCGTTTAGCATTCTTTCTCGGTGTAACAATGCTTCTCAATAGCGTACCTCAAGTGTTAACAGGTATTAGTGTGGCTTCTCCTCATGTTCAAAATATTAAGCTTTCAATGGTACCCCATTTGTTGGTCCATTTTTCATTCTTAGGTGTTGCTGTTGGAAGTGGATGGCAAGAGATGGTGGCTTATATAAATTTGGCTGCTTATTATTTATTATTTGGGCTCCCACTAGCAATCTTTCTTGCTTTAAAGCAAACTTGGGGACTTTATGGTGGCATAATAAGTGGAAATGCGCTTCAGATCTTATTCCTATTGATTATGACTTCCAGAACCAACTGGGACAATGAGACAGTACCCTTGCTGATCATCAAACCTAAATCAGATGAGACTGAAGACTATGTGCCGGTGAGTAGCTTTGAGGAGGCCTTTTCGGTCTTTTGGAAAGAGACAGTGAAGCTGTGGAAGATTGCAGCTCCAGTTGCAATAACAATGTTGTTTCAGTACTTGATTCAATCTGTCACCACCATATTTGTAGGCCATCTCGGAGACCTTGAACTCTCTGCTGTTTCACTGGCTCACAATGTCATTGGCAACATCTCTTATGGTTTCCTGCAAGGTATGGCAATTGCATTGGGAACACTTTGTGGTCAAGCATATGGTGCAGGCCAAGTTGGTTCACTTGGTATCTATTTGCAGCGCTCATGGATTGTCCTATCCATCACTTCTGTGATCCTTTCATCAGCTTATATATATGCAACTCCAATACTAATGATCTTAGGCCAAGACCCTCATATAGCTAATCTTGCCGGAAAATATAGCAGGAAGATTCTTCCTGAAATGTTCTCTTCTACTCTCAATTTGTCCACCCAAAAGTTCCTTCAGGCTCAAAGCAAGGTCGGCGTGATCACATGGATGGCCTTTGCAGCTCTCATTGCACAAACTGGACTTCTTCATCTCTTCATCAACGTTTTCGGGTGGGGATTAAGTGGTGCAGCTGCAGCATACAACATAACAAATTGGGGAATTGCAATTGGTCAAGGTGTGTATTGTGTGTTCTGGTGCCAAGAGGCTTGGAATACTGGATTTTCATGGTTGGCATTTAAGGACATTTGGGTTTTTGCAAAGCTTTCCTTTGCTTCGTGCTTCATGTTTTGCTTCGAGTTATGGTATGTCGTGAGTGTGAACATTCTCATTGGTGTCCTTCCAAATGCAGTGATTGCTCTTGGTTCCTTCTCTATATGCACGAACTTTCAGAATTGGGAGCTCATGTTGTTGGTTGGAGTAAATGCTGCCATAAGCATTCGAGTCTCCAATGAACTAGGGATGGGGCACCCAAGAACCGCAAAGTACTCAGTGTGTGTTGCTGTCTCGCAATCTCTCATGGTTGGGATCGTGTCCATGATTATTATCTTCATTACCAGAAACTACATTCCCATTGTCTTCACAGACAGTGAAGCTATGCAACGAGCCGTTGCTCGTTTAGCATACCTTCTTGGTGTAACCATGCTACTCAATAGTGCTACACAAGTGTTAACAGGTGTTGCTGTTGGAGGTGGATGGCAGGTGATGGTAGCTTATATAAATTTGGGTTGTTATTATTTGTTTGGTCTTCCACTTGCAATCCTTCTTGGGTTTAAAGCAAATCTAGGTGCCATGGGACTATGGGGTGGCATGATGAGTGGAAGTGCTCTTCAAATCCTGTTCCTACTGATTCTGACTTCTAGAACCAACTGGGACAATGAGGTGGAGCAAACCACAAAGCGCATAAGGAAGTGGGGGAACCAAGAAAAGGAGACTCAGAATATAGCTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

798

Amino Acids

87.52

Weight (kDa)

8.7

Isoelectric Point (pI)

29.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	84 - 220	4.4e-17	MatE
MatE	PF01554	353 - 506	1.2e-29	MatE
MatE	PF01554	574 - 735	1.4e-19	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002046)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g15630 FvH4_7g30024 FvH4_7g30070 FvH4_7g30070 FvH4_7g30070 FvH4_7g30072 FvH4_7g30073
malus_domestica	MD01G1206400.v1.1 MD07G1277100.v1.1
pyrus_communis	pycom01g21630 pycom07g25200
rosa_chinensis	RchiOBHm_Chr1g0378011 RchiOBHm_Chr1g0378051
rosa_laevigata	RLG00000026477 RLG00000026478
rosa_multiflora	Rmu_co8476257.1_g000001 Rmu_sc0002068.1_g000001 Rmu_sc0002068.1_g000002 Rmu_sc0005268.1_g000013
rosa_roxburghii	Rroxscaffold_156G00440340 Rroxscaffold_156G00440350 Rroxscaffold_156G00440370 Rroxscaffold_156G00440410 Rroxscaffold_4G00280820 Rroxscaffold_4G00280830 Rroxscaffold_4G00280840
rosa_samantha	Rh1AG424600 Rh1AG425000 Rh1AG425100 Rh1BG383700 Rh1BG384300 Rh1BG384600 Rh1CG397400 Rh1CG398000 Rh1CG398100 Rh1CG398200 Rh1CG398600 Rh1DG414700 Rh1DG415500 Rh1DG415600 Rh1DG415700 Rh1DG415900
rosa_wichuraiana	Rw0G014950 Rw1G037320 Rw1G037340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	120
AarI	CACCTGC	1 cut(s)	2134
Acc36I	ACCTGC	1 cut(s)	2134
Acc65I	GGTACC	1 cut(s)	697
AccB1I	GGYRCC	5 cut(s)	441, 697, 1641, 1911, 2231
AccB7I	CCANNNNNTGG	1 cut(s)	709
AccBSI	CCGCTC	1 cut(s)	452
AccI	GTMKAC	1 cut(s)	281
AciI	CCGC	2 cut(s)	452, 1923
AclI	AACGTT	1 cut(s)	1548
AclWI	GGATC	3 cut(s)	83, 1306, 1979
AcoI	YGGCCR	1 cut(s)	453
AcsI	RAATTY	3 cut(s)	397, 775, 2164
AcuI	CTGAAG	4 cut(s)	26, 863, 993, 1445
AdeI	CACNNNGTG	1 cut(s)	1226
AfaI	GTAC	6 cut(s)	66, 633, 699, 936, 1085, 1931
AfeI	AGCGCT	1 cut(s)	1280
AfiI	CCNNNNNNNGG	4 cut(s)	33, 451, 709, 2371
AgsI	TTSAA	5 cut(s)	677, 693, 1094, 1136, 2276
AjnI	CCWGG	1 cut(s)	91
AjuI	GAANNNNNNNTTGG	6 cut(s)	24, 56, 129, 161, 1443, 1475
AleI	CACNNNNGTG	1 cut(s)	1307
AloI	GAACNNNNNNTCC	2 cut(s)	365, 397
Alw21I	GWGCWC	2 cut(s)	1848, 2272
Alw26I	GTCTC	9 cut(s)	424, 528, 923, 962, 1022, 1122, 1894, 1954, 2369
AlwI	GGATC	3 cut(s)	83, 1306, 1979
Aor51HI	AGCGCT	1 cut(s)	1280
AoxI	GGCC	6 cut(s)	453, 1005, 1117, 1246, 1360, 1497
ApeKI	GCWGC	9 cut(s)	107, 782, 1052, 1276, 1505, 1574, 1577, 1580, 1871
ApoI	RAATTY	3 cut(s)	397, 775, 2164
Asp700I	GAANNNNTTC	1 cut(s)	397
Asp718I	GGTACC	1 cut(s)	697
AspLEI	GCGC	3 cut(s)	877, 1281, 2346
AspS9I	GGNCC	1 cut(s)	712
AsuHPI	GGTGA	3 cut(s)	1000, 1093, 2158
AvaII	GGWCC	1 cut(s)	712
BaeGI	GKGCMC	2 cut(s)	444, 1914
BanI	GGYRCC	5 cut(s)	441, 697, 1641, 1911, 2231
BanII	GRGCYC	2 cut(s)	807, 1848
BarI	GAAGNNNNNNTAC	2 cut(s)	603, 635
BbsI	GAAGAC	3 cut(s)	981, 2014, 2183
Bbv12I	GWGCWC	2 cut(s)	1848, 2272
BbvI	GCAGC	9 cut(s)	119, 769, 1064, 1288, 1517, 1564, 1586, 1592, 1858
BceAI	ACGGC	1 cut(s)	2036
BciT130I	CCWGG	1 cut(s)	93
BclI	TGATCA	2 cut(s)	945, 1485
BcoDI	GTCTC	9 cut(s)	424, 528, 923, 962, 1022, 1122, 1894, 1954, 2369
BfaI	CTAG	7 cut(s)	68, 234, 269, 812, 1901, 2228, 2304
BfmI	CTRYAG	2 cut(s)	111, 1578
BfoI	RGCGCY	1 cut(s)	1282
BfuAI	ACCTGC	1 cut(s)	2134
BglII	AGATCT	1 cut(s)	882
BmcAI	AGTACT	2 cut(s)	1085, 1931
Bme1390I	CCNGG	1 cut(s)	93
Bme18I	GGWCC	1 cut(s)	712
BmgT120I	GGNCC	1 cut(s)	712
BmrFI	CCNGG	1 cut(s)	93
BmrI	ACTGGG	2 cut(s)	928, 2323
BmuI	ACTGGG	2 cut(s)	928, 2323
BpiI	GAAGAC	3 cut(s)	981, 2014, 2183
BpmI	CTGGAG	2 cut(s)	75, 1041
BpuEI	CTTGAG	1 cut(s)	621
BsaBI	GATNNNNATC	2 cut(s)	518, 1988
BsaI	GGTCTC	1 cut(s)	1122
BsaJI	CCNNGG	1 cut(s)	2235
BsaXI	ACNNNNNCTCC	2 cut(s)	1835, 1865
Bsc4I	CCNNNNNNNGG	4 cut(s)	33, 451, 709, 2371
Bse118I	RCCGGY	1 cut(s)	985
Bse1I	ACTGG	7 cut(s)	306, 923, 1058, 1158, 1528, 1666, 2318
Bse3DI	GCAATG	3 cut(s)	327, 540, 1512
Bse8I	GATNNNNATC	2 cut(s)	518, 1988
BseBI	CCWGG	1 cut(s)	93
BseDI	CCNNGG	1 cut(s)	2235
BseGI	GGATG	5 cut(s)	441, 755, 1500, 1911, 2144
BseJI	GATNNNNATC	2 cut(s)	518, 1988
BseLI	CCNNNNNNNGG	4 cut(s)	33, 451, 709, 2371
BseMI	GCAATG	3 cut(s)	327, 540, 1512
BseMII	CTCAG	3 cut(s)	62, 1947, 2393
BseNI	ACTGG	7 cut(s)	306, 923, 1058, 1158, 1528, 1666, 2318
BseRI	GAGGAG	3 cut(s)	482, 657, 1016
BseSI	GKGCMC	2 cut(s)	444, 1914
BseXI	GCAGC	9 cut(s)	119, 769, 1064, 1288, 1517, 1564, 1586, 1592, 1858
BsgI	GTGCAG	3 cut(s)	126, 1263, 1593
BshFI	GGCC	6 cut(s)	455, 1007, 1119, 1248, 1362, 1499
BshNI	GGYRCC	5 cut(s)	441, 697, 1641, 1911, 2231
BsiHKAI	GWGCWC	2 cut(s)	1848, 2272
BsiSI	CCGG	2 cut(s)	986, 1389
BslFI	GGGAC	4 cut(s)	858, 935, 2253, 2330
BslI	CCNNNNNNNGG	4 cut(s)	33, 451, 709, 2371
BsmAI	GTCTC	9 cut(s)	424, 528, 923, 962, 1022, 1122, 1894, 1954, 2369
BsmFI	GGGAC	4 cut(s)	858, 935, 2253, 2330
BsmI	GAATGC	3 cut(s)	411, 596, 1881
BsnI	GGCC	6 cut(s)	455, 1007, 1119, 1248, 1362, 1499
Bso31I	GGTCTC	1 cut(s)	1122
Bsp1286I	GDGCHC	5 cut(s)	444, 807, 1848, 1914, 2272
Bsp143I	GATC	7 cut(s)	75, 882, 945, 1311, 1353, 1485, 1971
Bsp19I	CCATGG	1 cut(s)	2235
BspACI	CCGC	2 cut(s)	452, 1923
BspANI	GGCC	6 cut(s)	455, 1007, 1119, 1248, 1362, 1499
BspCNI	CTCAG	3 cut(s)	61, 1946, 2392
BspMAI	CTGCAG	1 cut(s)	1582
BspMI	ACCTGC	1 cut(s)	2134
BspPI	GGATC	3 cut(s)	83, 1306, 1979
BspQI	GCTCTTC	1 cut(s)	2277
BspT107I	GGYRCC	5 cut(s)	441, 697, 1641, 1911, 2231
BspTNI	GGTCTC	1 cut(s)	1122
BsrBI	CCGCTC	1 cut(s)	452
BsrDI	GCAATG	3 cut(s)	327, 540, 1512
BsrFI	RCCGGY	1 cut(s)	985
BsrI	ACTGG	7 cut(s)	306, 923, 1058, 1158, 1528, 1666, 2318
BssAI	RCCGGY	1 cut(s)	985
BssECI	CCNNGG	1 cut(s)	2235
BssMI	GATC	7 cut(s)	75, 882, 945, 1311, 1353, 1485, 1971
BssNAI	GTATAC	1 cut(s)	282
BssT1I	CCWWGG	1 cut(s)	2235
Bst1107I	GTATAC	1 cut(s)	282
Bst2UI	CCWGG	1 cut(s)	93
Bst4CI	ACNGT	4 cut(s)	368, 934, 1033, 2033
Bst6I	CTCTTC	3 cut(s)	1432, 1544, 2277
BstAPI	GCANNNNNTGC	3 cut(s)	329, 1241, 1799
BstC8I	GCNNGC	2 cut(s)	1246, 2392
BstDEI	CTNAG	5 cut(s)	48, 727, 1357, 1933, 2379
BstDSI	CCRYGG	1 cut(s)	2235
BstF5I	GGATG	5 cut(s)	441, 755, 1500, 1911, 2144
BstH2I	RGCGCY	1 cut(s)	1282
BstHHI	GCGC	3 cut(s)	877, 1281, 2346
BstKTI	GATC	7 cut(s)	78, 885, 948, 1314, 1356, 1488, 1974
BstMAI	GTCTC	9 cut(s)	424, 528, 923, 962, 1022, 1122, 1894, 1954, 2369
BstMBI	GATC	7 cut(s)	75, 882, 945, 1311, 1353, 1485, 1971
BstNI	CCWGG	1 cut(s)	93
BstSCI	CCNGG	1 cut(s)	91
BstSFI	CTRYAG	2 cut(s)	111, 1578
BstSLI	GKGCMC	2 cut(s)	444, 1914
BstV1I	GCAGC	9 cut(s)	119, 769, 1064, 1288, 1517, 1564, 1586, 1592, 1858
BstV2I	GAAGAC	3 cut(s)	981, 2014, 2183
BstX2I	RGATCY	2 cut(s)	75, 882
BstYI	RGATCY	2 cut(s)	75, 882
BstZ17I	GTATAC	1 cut(s)	282
BsuRI	GGCC	6 cut(s)	455, 1007, 1119, 1248, 1362, 1499
BtgI	CCRYGG	1 cut(s)	2235
BtsCI	GGATG	5 cut(s)	441, 755, 1500, 1911, 2144
BtsI	GCAGTG	1 cut(s)	1800
BtsIMutI	CAGTG	6 cut(s)	373, 1038, 1151, 1800, 1941, 2038
BveI	ACCTGC	1 cut(s)	2134
Cac8I	GCNNGC	2 cut(s)	1246, 2392
CfoI	GCGC	3 cut(s)	877, 1281, 2346
Cfr10I	RCCGGY	1 cut(s)	985
Cfr13I	GGNCC	1 cut(s)	712
Csp6I	GTAC	6 cut(s)	65, 632, 698, 935, 1084, 1930
CspCI	CAANNNNNGTGG	2 cut(s)	1093, 1128
CviQI	GTAC	6 cut(s)	65, 632, 698, 935, 1084, 1930
DdeI	CTNAG	5 cut(s)	48, 727, 1357, 1933, 2379
DpnI	GATC	7 cut(s)	77, 884, 947, 1313, 1355, 1487, 1973
DpnII	GATC	7 cut(s)	75, 882, 945, 1311, 1353, 1485, 1971
DraI	TTTAAA	3 cut(s)	214, 831, 2218
DraIII	CACNNNGTG	1 cut(s)	1226
EaeI	YGGCCR	1 cut(s)	453
Eam1104I	CTCTTC	3 cut(s)	1432, 1544, 2277
EarI	CTCTTC	3 cut(s)	1432, 1544, 2277
Ecl136II	GAGCTC	1 cut(s)	1846
Eco130I	CCWWGG	1 cut(s)	2235
Eco147I	AGGCCT	1 cut(s)	1007
Eco24I	GRGCYC	2 cut(s)	807, 1848
Eco31I	GGTCTC	1 cut(s)	1122
Eco47I	GGWCC	1 cut(s)	712
Eco47III	AGCGCT	1 cut(s)	1280
Eco53kI	GAGCTC	1 cut(s)	1846
Eco57I	CTGAAG	4 cut(s)	26, 863, 993, 1445
EcoICRI	GAGCTC	1 cut(s)	1846
EcoRII	CCWGG	1 cut(s)	91
EcoT14I	CCWWGG	1 cut(s)	2235
EcoT38I	GRGCYC	2 cut(s)	807, 1848
ErhI	CCWWGG	1 cut(s)	2235
FalI	AAGNNNNNCTT	2 cut(s)	1697, 1729
FaqI	GGGAC	4 cut(s)	858, 935, 2253, 2330
FauNDI	CATATG	1 cut(s)	1237
FbaI	TGATCA	2 cut(s)	945, 1485
FblI	GTMKAC	1 cut(s)	281
FokI	GGATG	5 cut(s)	448, 762, 1507, 1918, 2151
FriOI	GRGCYC	2 cut(s)	807, 1848
FspBI	CTAG	7 cut(s)	68, 234, 269, 812, 1901, 2228, 2304
GlaI	GCGC	3 cut(s)	876, 1280, 2345
GsuI	CTGGAG	2 cut(s)	75, 1041
HaeII	RGCGCY	1 cut(s)	1282
HaeIII	GGCC	6 cut(s)	455, 1007, 1119, 1248, 1362, 1499
HapII	CCGG	2 cut(s)	986, 1389
HhaI	GCGC	3 cut(s)	877, 1281, 2346
Hin6I	GCGC	3 cut(s)	875, 1279, 2344
HinP1I	GCGC	3 cut(s)	875, 1279, 2344
HincII	GTYRAC	3 cut(s)	311, 645, 2115
HindII	GTYRAC	3 cut(s)	311, 645, 2115
HindIII	AAGCTT	2 cut(s)	686, 1706
HinfI	GANTC	8 cut(s)	272, 289, 417, 1090, 1408, 1887, 2293, 2377
HpaI	GTTAAC	2 cut(s)	645, 2115
HpaII	CCGG	2 cut(s)	986, 1389
HphI	GGTGA	3 cut(s)	1000, 1093, 2158
Hpy166II	GTNNAC	7 cut(s)	282, 311, 645, 1259, 1446, 1765, 2115
Hpy188I	TCNGA	7 cut(s)	51, 882, 964, 1127, 1836, 2298, 2382
Hpy188III	TCNNGA	5 cut(s)	556, 909, 1415, 1756, 2304
Hpy8I	GTNNAC	7 cut(s)	282, 311, 645, 1259, 1446, 1765, 2115
HpyAV	CCTTC	6 cut(s)	50, 1469, 1793, 1822, 2081, 2216
HpyCH4III	ACNGT	4 cut(s)	368, 934, 1033, 2033
HpyCH4IV	ACGT	1 cut(s)	1548
HpyF3I	CTNAG	5 cut(s)	48, 727, 1357, 1933, 2379
HpySE526I	ACGT	1 cut(s)	1548
HspAI	GCGC	3 cut(s)	875, 1279, 2344
KpnI	GGTACC	1 cut(s)	701
Ksp22I	TGATCA	2 cut(s)	945, 1485
KspAI	GTTAAC	2 cut(s)	645, 2115
Kzo9I	GATC	7 cut(s)	75, 882, 945, 1311, 1353, 1485, 1971
LguI	GCTCTTC	1 cut(s)	2277
LmnI	GCTCC	5 cut(s)	94, 810, 1060, 1843, 2329
Lsp1109I	GCAGC	9 cut(s)	119, 769, 1064, 1288, 1517, 1564, 1586, 1592, 1858
MaeI	CTAG	7 cut(s)	68, 234, 269, 812, 1901, 2228, 2304
MaeII	ACGT	1 cut(s)	1548
MaeIII	GTNAC	3 cut(s)	610, 1099, 2080
MalI	GATC	7 cut(s)	77, 884, 947, 1313, 1355, 1487, 1973
MbiI	CCGCTC	1 cut(s)	452
MboI	GATC	7 cut(s)	75, 882, 945, 1311, 1353, 1485, 1971
MfeI	CAATTG	2 cut(s)	1206, 1611
MflI	RGATCY	2 cut(s)	75, 882
MhlI	GDGCHC	5 cut(s)	444, 807, 1848, 1914, 2272
MlyI	GAGTC	5 cut(s)	281, 298, 426, 1896, 2371
MmeI	TCCRAC	4 cut(s)	167, 721, 1840, 2110
MroXI	GAANNNNTTC	1 cut(s)	397
MslI	CAYNNNNRTG	2 cut(s)	1307, 1493
MspA1I	CMGCKG	2 cut(s)	110, 1577
MspI	CCGG	2 cut(s)	986, 1389
MspR9I	CCNGG	1 cut(s)	93
MunI	CAATTG	2 cut(s)	1206, 1611
Mva1269I	GAATGC	3 cut(s)	411, 596, 1881
MvaI	CCWGG	1 cut(s)	93
NcoI	CCATGG	1 cut(s)	2235
NdeI	CATATG	1 cut(s)	1237
NdeII	GATC	7 cut(s)	75, 882, 945, 1311, 1353, 1485, 1971
NmuCI	GTSAC	1 cut(s)	1099
OliI	CACNNNNGTG	1 cut(s)	1307
PaqCI	CACCTGC	1 cut(s)	2134
PceI	AGGCCT	1 cut(s)	1007
PciSI	GCTCTTC	1 cut(s)	2277
PcsI	WCGNNNNNNNCGW	1 cut(s)	206
PctI	GAATGC	3 cut(s)	411, 596, 1881
PdmI	GAANNNNTTC	1 cut(s)	397
PfeI	GAWTC	3 cut(s)	1090, 1408, 2293
PflMI	CCANNNNNTGG	1 cut(s)	709
PfoI	TCCNGGA	1 cut(s)	91
PleI	GAGTC	5 cut(s)	280, 297, 425, 1895, 2371
PpsI	GAGTC	5 cut(s)	280, 297, 425, 1895, 2371
PsiI	TTATAA	1 cut(s)	120
Psp124BI	GAGCTC	1 cut(s)	1848
Psp1406I	AACGTT	1 cut(s)	1548
Psp6I	CCWGG	1 cut(s)	91
PspGI	CCWGG	1 cut(s)	91
PspPI	GGNCC	1 cut(s)	712
PsrI	GAACNNNNNNTAC	2 cut(s)	1619, 1651
PstI	CTGCAG	1 cut(s)	1582
PsuI	RGATCY	2 cut(s)	75, 882
PvuII	CAGCTG	2 cut(s)	110, 1577
RsaI	GTAC	6 cut(s)	66, 633, 699, 936, 1085, 1931
RsaNI	GTAC	6 cut(s)	65, 632, 698, 935, 1084, 1930
RseI	CAYNNNNRTG	2 cut(s)	1307, 1493
SacI	GAGCTC	1 cut(s)	1848
SapI	GCTCTTC	1 cut(s)	2277
Sau3AI	GATC	7 cut(s)	75, 882, 945, 1311, 1353, 1485, 1971
Sau96I	GGNCC	1 cut(s)	712
ScaI	AGTACT	2 cut(s)	1085, 1931
SchI	GAGTC	5 cut(s)	281, 298, 426, 1896, 2371
ScrFI	CCNGG	1 cut(s)	93
SduI	GDGCHC	5 cut(s)	444, 807, 1848, 1914, 2272
SfcI	CTRYAG	2 cut(s)	111, 1578
SinI	GGWCC	1 cut(s)	712
SmiMI	CAYNNNNRTG	2 cut(s)	1307, 1493
SmlI	CTYRAG	1 cut(s)	636
SmoI	CTYRAG	1 cut(s)	636
SseBI	AGGCCT	1 cut(s)	1007
SsiI	CCGC	2 cut(s)	452, 1923
SspI	AATATT	1 cut(s)	682
SspMI	CTAG	7 cut(s)	68, 234, 269, 812, 1901, 2228, 2304
SstI	GAGCTC	1 cut(s)	1848
StuI	AGGCCT	1 cut(s)	1007
StyD4I	CCNGG	1 cut(s)	91
StyI	CCWWGG	1 cut(s)	2235
TaaI	ACNGT	4 cut(s)	368, 934, 1033, 2033
TaiI	ACGT	1 cut(s)	1551
TaqI	TCGA	3 cut(s)	415, 1740, 1885
TaqII	GACCGA	1 cut(s)	1003
TatI	WGTACW	2 cut(s)	1083, 1929
TauI	GCSGC	1 cut(s)	455
TfiI	GAWTC	3 cut(s)	1090, 1408, 2293
TscAI	CASTG	6 cut(s)	373, 1038, 1158, 1800, 1941, 2038
TseFI	GTSAC	1 cut(s)	1099
TseI	GCWGC	9 cut(s)	107, 782, 1052, 1276, 1505, 1574, 1577, 1580, 1871
Tsp45I	GTSAC	1 cut(s)	1099
TspGWI	ACGGA	1 cut(s)	232
TspRI	CASTG	6 cut(s)	373, 1038, 1158, 1800, 1941, 2038
Van91I	CCANNNNNTGG	1 cut(s)	709
VpaK11BI	GGWCC	1 cut(s)	712
XapI	RAATTY	3 cut(s)	397, 775, 2164
XbaI	TCTAGA	1 cut(s)	2303
XmiI	GTMKAC	1 cut(s)	281
XmnI	GAANNNNTTC	1 cut(s)	397
XspI	CTAG	7 cut(s)	68, 234, 269, 812, 1901, 2228, 2304
ZrmI	AGTACT	2 cut(s)	1085, 1931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.