Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g15630 FvH4_7g30024 FvH4_7g30070 FvH4_7g30070 FvH4_7g30070 FvH4_7g30072 FvH4_7g30073 |
| malus_domestica | MD01G1206400.v1.1 MD07G1277100.v1.1 |
| pyrus_communis | pycom01g21630 pycom07g25200 |
| rosa_chinensis | RchiOBHm_Chr1g0378011 RchiOBHm_Chr1g0378051 |
| rosa_laevigata | RLG00000026477 RLG00000026478 |
| rosa_multiflora | Rmu_co8476257.1_g000001 Rmu_sc0002068.1_g000001 Rmu_sc0002068.1_g000002 Rmu_sc0005268.1_g000013 |
| rosa_roxburghii | Rroxscaffold_156G00440340 Rroxscaffold_156G00440350 Rroxscaffold_156G00440370 Rroxscaffold_156G00440410 Rroxscaffold_4G00280820 Rroxscaffold_4G00280830 Rroxscaffold_4G00280840 |
| rosa_samantha | Rh1AG424600 Rh1AG425000 Rh1AG425100 Rh1BG383700 Rh1BG384300 Rh1BG384600 Rh1CG397400 Rh1CG398000 Rh1CG398100 Rh1CG398200 Rh1CG398600 Rh1DG414700 Rh1DG415500 Rh1DG415600 Rh1DG415700 Rh1DG415900 |
| rosa_wichuraiana | Rw0G014950 Rw1G037320 Rw1G037340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 168 |
| AarI | CACCTGC | 1 cut(s) | 1528 |
| Acc36I | ACCTGC | 1 cut(s) | 1528 |
| AccB1I | GGYRCC | 2 cut(s) | 360, 1158 |
| AccBSI | CCGCTC | 1 cut(s) | 371 |
| AciI | CCGC | 1 cut(s) | 371 |
| AclI | AACGTT | 1 cut(s) | 1065 |
| AclWI | GGATC | 2 cut(s) | 83, 817 |
| AcoI | YGGCCR | 1 cut(s) | 372 |
| AcuI | CTGAAG | 2 cut(s) | 638, 956 |
| AdeI | CACNNNGTG | 1 cut(s) | 737 |
| AfaI | GTAC | 3 cut(s) | 66, 555, 1039 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 33, 370, 1585 |
| AgsI | TTSAA | 4 cut(s) | 599, 615, 929, 1430 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 24, 56, 177, 209, 954, 986 |
| AleI | CACNNNNGTG | 1 cut(s) | 818 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 284, 316 |
| AluBI | AGCT | 9 cut(s) | 158, 164, 610, 836, 890, 1019, 1094, 1363, 1604 |
| AluI | AGCT | 9 cut(s) | 158, 164, 610, 836, 890, 1019, 1094, 1363, 1604 |
| Alw21I | GWGCWC | 2 cut(s) | 794, 1365 |
| Alw26I | GTCTC | 3 cut(s) | 343, 450, 1583 |
| AlwI | GGATC | 2 cut(s) | 83, 817 |
| AoxI | GGCC | 4 cut(s) | 372, 757, 871, 1008 |
| ApeKI | GCWGC | 6 cut(s) | 155, 320, 1016, 1091, 1094, 1097 |
| AspLEI | GCGC | 2 cut(s) | 652, 1560 |
| BaeGI | GKGCMC | 1 cut(s) | 363 |
| BanI | GGYRCC | 2 cut(s) | 360, 1158 |
| BanII | GRGCYC | 1 cut(s) | 1365 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 525, 557, 1467, 1499 |
| BbsI | GAAGAC | 1 cut(s) | 1408 |
| Bbv12I | GWGCWC | 2 cut(s) | 794, 1365 |
| BbvI | GCAGC | 6 cut(s) | 167, 307, 1028, 1081, 1103, 1109 |
| BccI | CCATC | 6 cut(s) | 23, 349, 476, 818, 1000, 1527 |
| BceAI | ACGGC | 1 cut(s) | 1430 |
| BclI | TGATCA | 1 cut(s) | 996 |
| BcoDI | GTCTC | 3 cut(s) | 343, 450, 1583 |
| BfaI | CTAG | 3 cut(s) | 68, 92, 282 |
| BfmI | CTRYAG | 2 cut(s) | 159, 1095 |
| BfuAI | ACCTGC | 1 cut(s) | 1528 |
| BglII | AGATCT | 1 cut(s) | 657 |
| BisI | GCNGC | 7 cut(s) | 156, 321, 372, 1017, 1092, 1095, 1098 |
| BlsI | GCNGC | 7 cut(s) | 157, 322, 373, 1018, 1093, 1096, 1099 |
| BmcAI | AGTACT | 1 cut(s) | 1039 |
| BmiI | GGNNCC | 5 cut(s) | 38, 362, 1160, 1327, 1577 |
| BmrI | ACTGGG | 1 cut(s) | 703 |
| BmuI | ACTGGG | 1 cut(s) | 703 |
| BpiI | GAAGAC | 1 cut(s) | 1408 |
| BpuEI | CTTGAG | 1 cut(s) | 543 |
| BsaBI | GATNNNNATC | 1 cut(s) | 440 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1352, 1382 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 33, 370, 1585 |
| Bse1I | ACTGG | 4 cut(s) | 698, 1035, 1045, 1183 |
| Bse3DI | GCAATG | 3 cut(s) | 462, 1023, 1227 |
| Bse8I | GATNNNNATC | 1 cut(s) | 440 |
| BseGI | GGATG | 3 cut(s) | 360, 1011, 1538 |
| BseJI | GATNNNNATC | 1 cut(s) | 440 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 33, 370, 1585 |
| BseMI | GCAATG | 3 cut(s) | 462, 1023, 1227 |
| BseMII | CTCAG | 2 cut(s) | 62, 1607 |
| BseNI | ACTGG | 4 cut(s) | 698, 1035, 1045, 1183 |
| BseRI | GAGGAG | 2 cut(s) | 404, 579 |
| BseSI | GKGCMC | 1 cut(s) | 363 |
| BseXI | GCAGC | 6 cut(s) | 167, 307, 1028, 1081, 1103, 1109 |
| BseYI | CCCAGC | 1 cut(s) | 138 |
| BsgI | GTGCAG | 3 cut(s) | 174, 774, 1110 |
| BshFI | GGCC | 4 cut(s) | 374, 759, 873, 1010 |
| BshNI | GGYRCC | 2 cut(s) | 360, 1158 |
| BsiHKAI | GWGCWC | 2 cut(s) | 794, 1365 |
| BsiSI | CCGG | 1 cut(s) | 900 |
| BslFI | GGGAC | 2 cut(s) | 633, 710 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 33, 370, 1585 |
| BsmAI | GTCTC | 3 cut(s) | 343, 450, 1583 |
| BsmFI | GGGAC | 2 cut(s) | 633, 710 |
| BsmI | GAATGC | 2 cut(s) | 330, 518 |
| BsnI | GGCC | 4 cut(s) | 374, 759, 873, 1010 |
| Bsp1286I | GDGCHC | 3 cut(s) | 363, 794, 1365 |
| Bsp143I | GATC | 5 cut(s) | 75, 657, 822, 864, 996 |
| BspACI | CCGC | 1 cut(s) | 371 |
| BspANI | GGCC | 4 cut(s) | 374, 759, 873, 1010 |
| BspCNI | CTCAG | 2 cut(s) | 61, 1606 |
| BspHI | TCATGA | 1 cut(s) | 1272 |
| BspLI | GGNNCC | 5 cut(s) | 38, 362, 1160, 1327, 1577 |
| BspMAI | CTGCAG | 1 cut(s) | 1099 |
| BspMI | ACCTGC | 1 cut(s) | 1528 |
| BspPI | GGATC | 2 cut(s) | 83, 817 |
| BspT107I | GGYRCC | 2 cut(s) | 360, 1158 |
| BsrBI | CCGCTC | 1 cut(s) | 371 |
| BsrDI | GCAATG | 3 cut(s) | 462, 1023, 1227 |
| BsrI | ACTGG | 4 cut(s) | 698, 1035, 1045, 1183 |
| BssMI | GATC | 5 cut(s) | 75, 657, 822, 864, 996 |
| Bst4CI | ACNGT | 1 cut(s) | 130 |
| Bst6I | CTCTTC | 3 cut(s) | 125, 943, 1061 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 752, 1316 |
| BstC8I | GCNNGC | 3 cut(s) | 404, 757, 1606 |
| BstDEI | CTNAG | 3 cut(s) | 48, 868, 1593 |
| BstF5I | GGATG | 3 cut(s) | 360, 1011, 1538 |
| BstHHI | GCGC | 2 cut(s) | 652, 1560 |
| BstKTI | GATC | 5 cut(s) | 78, 660, 825, 867, 999 |
| BstMAI | GTCTC | 3 cut(s) | 343, 450, 1583 |
| BstMBI | GATC | 5 cut(s) | 75, 657, 822, 864, 996 |
| BstSFI | CTRYAG | 2 cut(s) | 159, 1095 |
| BstSLI | GKGCMC | 1 cut(s) | 363 |
| BstV1I | GCAGC | 6 cut(s) | 167, 307, 1028, 1081, 1103, 1109 |
| BstV2I | GAAGAC | 1 cut(s) | 1408 |
| BstX2I | RGATCY | 2 cut(s) | 75, 657 |
| BstYI | RGATCY | 2 cut(s) | 75, 657 |
| BsuRI | GGCC | 4 cut(s) | 374, 759, 873, 1010 |
| BtsCI | GGATG | 3 cut(s) | 360, 1011, 1538 |
| BtsI | GCAGTG | 2 cut(s) | 794, 1317 |
| BtsIMutI | CAGTG | 2 cut(s) | 794, 1317 |
| BveI | ACCTGC | 1 cut(s) | 1528 |
| Cac8I | GCNNGC | 3 cut(s) | 404, 757, 1606 |
| CciI | TCATGA | 1 cut(s) | 1272 |
| CfoI | GCGC | 2 cut(s) | 652, 1560 |
| Csp6I | GTAC | 3 cut(s) | 65, 554, 1038 |
| CviAII | CATG | 9 cut(s) | 72, 298, 593, 795, 1002, 1246, 1273, 1366, 1480 |
| CviQI | GTAC | 3 cut(s) | 65, 554, 1038 |
| DdeI | CTNAG | 3 cut(s) | 48, 868, 1593 |
| DpnI | GATC | 5 cut(s) | 77, 659, 824, 866, 998 |
| DpnII | GATC | 5 cut(s) | 75, 657, 822, 864, 996 |
| DraI | TTTAAA | 1 cut(s) | 262 |
| DraIII | CACNNNGTG | 1 cut(s) | 737 |
| EaeI | YGGCCR | 1 cut(s) | 372 |
| Eam1104I | CTCTTC | 3 cut(s) | 125, 943, 1061 |
| EarI | CTCTTC | 3 cut(s) | 125, 943, 1061 |
| Ecl136II | GAGCTC | 1 cut(s) | 1363 |
| Eco24I | GRGCYC | 1 cut(s) | 1365 |
| Eco53kI | GAGCTC | 1 cut(s) | 1363 |
| Eco57I | CTGAAG | 2 cut(s) | 638, 956 |
| EcoICRI | GAGCTC | 1 cut(s) | 1363 |
| EcoT38I | GRGCYC | 1 cut(s) | 1365 |
| FaeI | CATG | 9 cut(s) | 75, 301, 596, 798, 1005, 1249, 1276, 1369, 1483 |
| FaqI | GGGAC | 2 cut(s) | 633, 710 |
| FatI | CATG | 9 cut(s) | 71, 297, 592, 794, 1001, 1245, 1272, 1365, 1479 |
| FauNDI | CATATG | 1 cut(s) | 748 |
| FbaI | TGATCA | 1 cut(s) | 996 |
| Fnu4HI | GCNGC | 7 cut(s) | 156, 321, 372, 1017, 1092, 1095, 1098 |
| FokI | GGATG | 3 cut(s) | 367, 1018, 1545 |
| FriOI | GRGCYC | 1 cut(s) | 1365 |
| Fsp4HI | GCNGC | 7 cut(s) | 156, 321, 372, 1017, 1092, 1095, 1098 |
| FspBI | CTAG | 3 cut(s) | 68, 92, 282 |
| GlaI | GCGC | 2 cut(s) | 651, 1559 |
| GluI | GCNGC | 7 cut(s) | 156, 321, 372, 1017, 1092, 1095, 1098 |
| GsaI | CCCAGC | 1 cut(s) | 142 |
| HaeIII | GGCC | 4 cut(s) | 374, 759, 873, 1010 |
| HapII | CCGG | 1 cut(s) | 900 |
| HhaI | GCGC | 2 cut(s) | 652, 1560 |
| Hin1II | CATG | 9 cut(s) | 75, 301, 596, 798, 1005, 1249, 1276, 1369, 1483 |
| Hin6I | GCGC | 2 cut(s) | 650, 1558 |
| HinP1I | GCGC | 2 cut(s) | 650, 1558 |
| HincII | GTYRAC | 2 cut(s) | 567, 1509 |
| HindII | GTYRAC | 2 cut(s) | 567, 1509 |
| HindIII | AAGCTT | 1 cut(s) | 608 |
| HinfI | GANTC | 3 cut(s) | 336, 919, 1591 |
| HpaI | GTTAAC | 2 cut(s) | 567, 1509 |
| HpaII | CCGG | 1 cut(s) | 900 |
| Hpy166II | GTNNAC | 5 cut(s) | 567, 770, 957, 1282, 1509 |
| Hpy188I | TCNGA | 4 cut(s) | 51, 657, 1353, 1596 |
| Hpy188III | TCNNGA | 4 cut(s) | 478, 684, 926, 1273 |
| Hpy8I | GTNNAC | 5 cut(s) | 567, 770, 957, 1282, 1509 |
| HpyAV | CCTTC | 5 cut(s) | 50, 980, 1310, 1339, 1475 |
| HpyCH4III | ACNGT | 1 cut(s) | 130 |
| HpyCH4IV | ACGT | 1 cut(s) | 1065 |
| HpyF3I | CTNAG | 3 cut(s) | 48, 868, 1593 |
| HpySE526I | ACGT | 1 cut(s) | 1065 |
| Hsp92II | CATG | 9 cut(s) | 75, 301, 596, 798, 1005, 1249, 1276, 1369, 1483 |
| HspAI | GCGC | 2 cut(s) | 650, 1558 |
| Ksp22I | TGATCA | 1 cut(s) | 996 |
| KspAI | GTTAAC | 2 cut(s) | 567, 1509 |
| Kzo9I | GATC | 5 cut(s) | 75, 657, 822, 864, 996 |
| LmnI | GCTCC | 2 cut(s) | 1360, 1543 |
| Lsp1109I | GCAGC | 6 cut(s) | 167, 307, 1028, 1081, 1103, 1109 |
| MaeI | CTAG | 3 cut(s) | 68, 92, 282 |
| MaeII | ACGT | 1 cut(s) | 1065 |
| MaeIII | GTNAC | 3 cut(s) | 94, 532, 1474 |
| MalI | GATC | 5 cut(s) | 77, 659, 824, 866, 998 |
| MbiI | CCGCTC | 1 cut(s) | 371 |
| MboI | GATC | 5 cut(s) | 75, 657, 822, 864, 996 |
| MboII | GAAGA | 9 cut(s) | 112, 436, 914, 928, 930, 1040, 1048, 1408, 1442 |
| MfeI | CAATTG | 2 cut(s) | 717, 1128 |
| MflI | RGATCY | 2 cut(s) | 75, 657 |
| MhlI | GDGCHC | 3 cut(s) | 363, 794, 1365 |
| MluCI | AATT | 8 cut(s) | 19, 200, 717, 949, 1114, 1122, 1128, 1354 |
| MlyI | GAGTC | 2 cut(s) | 345, 1585 |
| MmeI | TCCRAC | 3 cut(s) | 215, 1357, 1504 |
| MnlI | CCTC | 8 cut(s) | 395, 425, 567, 600, 891, 1159, 1195, 1520 |
| MseI | TTAA | 5 cut(s) | 261, 566, 606, 1082, 1508 |
| MslI | CAYNNNNRTG | 3 cut(s) | 818, 1004, 1277 |
| MspA1I | CMGCKG | 2 cut(s) | 158, 1094 |
| MspI | CCGG | 1 cut(s) | 900 |
| MunI | CAATTG | 2 cut(s) | 717, 1128 |
| Mva1269I | GAATGC | 2 cut(s) | 330, 518 |
| NdeI | CATATG | 1 cut(s) | 748 |
| NdeII | GATC | 5 cut(s) | 75, 657, 822, 864, 996 |
| NlaIII | CATG | 9 cut(s) | 75, 301, 596, 798, 1005, 1249, 1276, 1369, 1483 |
| NlaIV | GGNNCC | 5 cut(s) | 38, 362, 1160, 1327, 1577 |
| NmuCI | GTSAC | 1 cut(s) | 94 |
| OliI | CACNNNNGTG | 1 cut(s) | 818 |
| PagI | TCATGA | 1 cut(s) | 1272 |
| PaqCI | CACCTGC | 1 cut(s) | 1528 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 254 |
| PctI | GAATGC | 2 cut(s) | 330, 518 |
| PfeI | GAWTC | 1 cut(s) | 919 |
| PkrI | GCNGC | 7 cut(s) | 157, 322, 373, 1018, 1093, 1096, 1099 |
| PleI | GAGTC | 2 cut(s) | 344, 1585 |
| PpsI | GAGTC | 2 cut(s) | 344, 1585 |
| PsiI | TTATAA | 1 cut(s) | 168 |
| Psp124BI | GAGCTC | 1 cut(s) | 1365 |
| Psp1406I | AACGTT | 1 cut(s) | 1065 |
| PspFI | CCCAGC | 1 cut(s) | 138 |
| PspN4I | GGNNCC | 5 cut(s) | 38, 362, 1160, 1327, 1577 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1136, 1168 |
| PstI | CTGCAG | 1 cut(s) | 1099 |
| PsuI | RGATCY | 2 cut(s) | 75, 657 |
| PvuII | CAGCTG | 2 cut(s) | 158, 1094 |
| RsaI | GTAC | 3 cut(s) | 66, 555, 1039 |
| RsaNI | GTAC | 3 cut(s) | 65, 554, 1038 |
| RseI | CAYNNNNRTG | 3 cut(s) | 818, 1004, 1277 |
| SacI | GAGCTC | 1 cut(s) | 1365 |
| SaqAI | TTAA | 5 cut(s) | 261, 566, 606, 1082, 1508 |
| SatI | GCNGC | 7 cut(s) | 156, 321, 372, 1017, 1092, 1095, 1098 |
| Sau3AI | GATC | 5 cut(s) | 75, 657, 822, 864, 996 |
| ScaI | AGTACT | 1 cut(s) | 1039 |
| SchI | GAGTC | 2 cut(s) | 345, 1585 |
| SduI | GDGCHC | 3 cut(s) | 363, 794, 1365 |
| SfcI | CTRYAG | 2 cut(s) | 159, 1095 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 818, 1004, 1277 |
| SmlI | CTYRAG | 1 cut(s) | 558 |
| SmoI | CTYRAG | 1 cut(s) | 558 |
| Sse9I | AATT | 8 cut(s) | 19, 200, 717, 949, 1114, 1122, 1128, 1354 |
| SsiI | CCGC | 1 cut(s) | 371 |
| SspI | AATATT | 1 cut(s) | 604 |
| SspMI | CTAG | 3 cut(s) | 68, 92, 282 |
| SstI | GAGCTC | 1 cut(s) | 1365 |
| TaaI | ACNGT | 1 cut(s) | 130 |
| TaiI | ACGT | 1 cut(s) | 1068 |
| TaqI | TCGA | 2 cut(s) | 334, 1257 |
| TasI | AATT | 8 cut(s) | 19, 200, 717, 949, 1114, 1122, 1128, 1354 |
| TatI | WGTACW | 1 cut(s) | 1037 |
| TauI | GCSGC | 1 cut(s) | 374 |
| TfiI | GAWTC | 1 cut(s) | 919 |
| Tru1I | TTAA | 5 cut(s) | 261, 566, 606, 1082, 1508 |
| Tru9I | TTAA | 5 cut(s) | 261, 566, 606, 1082, 1508 |
| TscAI | CASTG | 2 cut(s) | 794, 1317 |
| TseFI | GTSAC | 1 cut(s) | 94 |
| TseI | GCWGC | 6 cut(s) | 155, 320, 1016, 1091, 1094, 1097 |
| Tsp45I | GTSAC | 1 cut(s) | 94 |
| TspDTI | ATGAA | 8 cut(s) | 112, 360, 436, 819, 1040, 1048, 1176, 1234 |
| TspRI | CASTG | 2 cut(s) | 794, 1317 |
| XspI | CTAG | 3 cut(s) | 68, 92, 282 |
| ZrmI | AGTACT | 1 cut(s) | 1039 |