Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g15630 FvH4_7g30024 FvH4_7g30070 FvH4_7g30070 FvH4_7g30070 FvH4_7g30072 FvH4_7g30073 |
| malus_domestica | MD01G1206400.v1.1 MD07G1277100.v1.1 |
| pyrus_communis | pycom01g21630 pycom07g25200 |
| rosa_chinensis | RchiOBHm_Chr1g0378011 RchiOBHm_Chr1g0378051 |
| rosa_laevigata | RLG00000026477 RLG00000026478 |
| rosa_multiflora | Rmu_co8476257.1_g000001 Rmu_sc0002068.1_g000001 Rmu_sc0002068.1_g000002 Rmu_sc0005268.1_g000013 |
| rosa_roxburghii | Rroxscaffold_156G00440340 Rroxscaffold_156G00440350 Rroxscaffold_156G00440370 Rroxscaffold_156G00440410 Rroxscaffold_4G00280820 Rroxscaffold_4G00280830 Rroxscaffold_4G00280840 |
| rosa_samantha | Rh1AG424600 Rh1AG425000 Rh1AG425100 Rh1BG383700 Rh1BG384300 Rh1BG384600 Rh1CG397400 Rh1CG398000 Rh1CG398100 Rh1CG398200 Rh1CG398600 Rh1DG414700 Rh1DG415500 Rh1DG415600 Rh1DG415700 Rh1DG415900 |
| rosa_wichuraiana | Rw0G014950 Rw1G037320 Rw1G037340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 120 |
| AarI | CACCTGC | 1 cut(s) | 2134 |
| Acc36I | ACCTGC | 1 cut(s) | 2134 |
| Acc65I | GGTACC | 1 cut(s) | 697 |
| AccB1I | GGYRCC | 5 cut(s) | 441, 697, 1641, 1911, 2231 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 709 |
| AccBSI | CCGCTC | 1 cut(s) | 452 |
| AccI | GTMKAC | 1 cut(s) | 281 |
| AciI | CCGC | 2 cut(s) | 452, 1923 |
| AclI | AACGTT | 1 cut(s) | 1548 |
| AclWI | GGATC | 3 cut(s) | 83, 1306, 1979 |
| AcoI | YGGCCR | 1 cut(s) | 453 |
| AcsI | RAATTY | 3 cut(s) | 397, 775, 2164 |
| AcuI | CTGAAG | 4 cut(s) | 26, 863, 993, 1445 |
| AdeI | CACNNNGTG | 1 cut(s) | 1226 |
| AfaI | GTAC | 6 cut(s) | 66, 633, 699, 936, 1085, 1931 |
| AfeI | AGCGCT | 1 cut(s) | 1280 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 33, 451, 709, 2371 |
| AgsI | TTSAA | 5 cut(s) | 677, 693, 1094, 1136, 2276 |
| AjnI | CCWGG | 1 cut(s) | 91 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 24, 56, 129, 161, 1443, 1475 |
| AleI | CACNNNNGTG | 1 cut(s) | 1307 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 365, 397 |
| Alw21I | GWGCWC | 2 cut(s) | 1848, 2272 |
| Alw26I | GTCTC | 9 cut(s) | 424, 528, 923, 962, 1022, 1122, 1894, 1954, 2369 |
| AlwI | GGATC | 3 cut(s) | 83, 1306, 1979 |
| Aor51HI | AGCGCT | 1 cut(s) | 1280 |
| AoxI | GGCC | 6 cut(s) | 453, 1005, 1117, 1246, 1360, 1497 |
| ApeKI | GCWGC | 9 cut(s) | 107, 782, 1052, 1276, 1505, 1574, 1577, 1580, 1871 |
| ApoI | RAATTY | 3 cut(s) | 397, 775, 2164 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 397 |
| Asp718I | GGTACC | 1 cut(s) | 697 |
| AspLEI | GCGC | 3 cut(s) | 877, 1281, 2346 |
| AspS9I | GGNCC | 1 cut(s) | 712 |
| AsuHPI | GGTGA | 3 cut(s) | 1000, 1093, 2158 |
| AvaII | GGWCC | 1 cut(s) | 712 |
| BaeGI | GKGCMC | 2 cut(s) | 444, 1914 |
| BanI | GGYRCC | 5 cut(s) | 441, 697, 1641, 1911, 2231 |
| BanII | GRGCYC | 2 cut(s) | 807, 1848 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 603, 635 |
| BbsI | GAAGAC | 3 cut(s) | 981, 2014, 2183 |
| Bbv12I | GWGCWC | 2 cut(s) | 1848, 2272 |
| BbvI | GCAGC | 9 cut(s) | 119, 769, 1064, 1288, 1517, 1564, 1586, 1592, 1858 |
| BceAI | ACGGC | 1 cut(s) | 2036 |
| BciT130I | CCWGG | 1 cut(s) | 93 |
| BclI | TGATCA | 2 cut(s) | 945, 1485 |
| BcoDI | GTCTC | 9 cut(s) | 424, 528, 923, 962, 1022, 1122, 1894, 1954, 2369 |
| BfaI | CTAG | 7 cut(s) | 68, 234, 269, 812, 1901, 2228, 2304 |
| BfmI | CTRYAG | 2 cut(s) | 111, 1578 |
| BfoI | RGCGCY | 1 cut(s) | 1282 |
| BfuAI | ACCTGC | 1 cut(s) | 2134 |
| BglII | AGATCT | 1 cut(s) | 882 |
| BmcAI | AGTACT | 2 cut(s) | 1085, 1931 |
| Bme1390I | CCNGG | 1 cut(s) | 93 |
| Bme18I | GGWCC | 1 cut(s) | 712 |
| BmgT120I | GGNCC | 1 cut(s) | 712 |
| BmrFI | CCNGG | 1 cut(s) | 93 |
| BmrI | ACTGGG | 2 cut(s) | 928, 2323 |
| BmuI | ACTGGG | 2 cut(s) | 928, 2323 |
| BpiI | GAAGAC | 3 cut(s) | 981, 2014, 2183 |
| BpmI | CTGGAG | 2 cut(s) | 75, 1041 |
| BpuEI | CTTGAG | 1 cut(s) | 621 |
| BsaBI | GATNNNNATC | 2 cut(s) | 518, 1988 |
| BsaI | GGTCTC | 1 cut(s) | 1122 |
| BsaJI | CCNNGG | 1 cut(s) | 2235 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1835, 1865 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 33, 451, 709, 2371 |
| Bse118I | RCCGGY | 1 cut(s) | 985 |
| Bse1I | ACTGG | 7 cut(s) | 306, 923, 1058, 1158, 1528, 1666, 2318 |
| Bse3DI | GCAATG | 3 cut(s) | 327, 540, 1512 |
| Bse8I | GATNNNNATC | 2 cut(s) | 518, 1988 |
| BseBI | CCWGG | 1 cut(s) | 93 |
| BseDI | CCNNGG | 1 cut(s) | 2235 |
| BseGI | GGATG | 5 cut(s) | 441, 755, 1500, 1911, 2144 |
| BseJI | GATNNNNATC | 2 cut(s) | 518, 1988 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 33, 451, 709, 2371 |
| BseMI | GCAATG | 3 cut(s) | 327, 540, 1512 |
| BseMII | CTCAG | 3 cut(s) | 62, 1947, 2393 |
| BseNI | ACTGG | 7 cut(s) | 306, 923, 1058, 1158, 1528, 1666, 2318 |
| BseRI | GAGGAG | 3 cut(s) | 482, 657, 1016 |
| BseSI | GKGCMC | 2 cut(s) | 444, 1914 |
| BseXI | GCAGC | 9 cut(s) | 119, 769, 1064, 1288, 1517, 1564, 1586, 1592, 1858 |
| BsgI | GTGCAG | 3 cut(s) | 126, 1263, 1593 |
| BshFI | GGCC | 6 cut(s) | 455, 1007, 1119, 1248, 1362, 1499 |
| BshNI | GGYRCC | 5 cut(s) | 441, 697, 1641, 1911, 2231 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1848, 2272 |
| BsiSI | CCGG | 2 cut(s) | 986, 1389 |
| BslFI | GGGAC | 4 cut(s) | 858, 935, 2253, 2330 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 33, 451, 709, 2371 |
| BsmAI | GTCTC | 9 cut(s) | 424, 528, 923, 962, 1022, 1122, 1894, 1954, 2369 |
| BsmFI | GGGAC | 4 cut(s) | 858, 935, 2253, 2330 |
| BsmI | GAATGC | 3 cut(s) | 411, 596, 1881 |
| BsnI | GGCC | 6 cut(s) | 455, 1007, 1119, 1248, 1362, 1499 |
| Bso31I | GGTCTC | 1 cut(s) | 1122 |
| Bsp1286I | GDGCHC | 5 cut(s) | 444, 807, 1848, 1914, 2272 |
| Bsp143I | GATC | 7 cut(s) | 75, 882, 945, 1311, 1353, 1485, 1971 |
| Bsp19I | CCATGG | 1 cut(s) | 2235 |
| BspACI | CCGC | 2 cut(s) | 452, 1923 |
| BspANI | GGCC | 6 cut(s) | 455, 1007, 1119, 1248, 1362, 1499 |
| BspCNI | CTCAG | 3 cut(s) | 61, 1946, 2392 |
| BspMAI | CTGCAG | 1 cut(s) | 1582 |
| BspMI | ACCTGC | 1 cut(s) | 2134 |
| BspPI | GGATC | 3 cut(s) | 83, 1306, 1979 |
| BspQI | GCTCTTC | 1 cut(s) | 2277 |
| BspT107I | GGYRCC | 5 cut(s) | 441, 697, 1641, 1911, 2231 |
| BspTNI | GGTCTC | 1 cut(s) | 1122 |
| BsrBI | CCGCTC | 1 cut(s) | 452 |
| BsrDI | GCAATG | 3 cut(s) | 327, 540, 1512 |
| BsrFI | RCCGGY | 1 cut(s) | 985 |
| BsrI | ACTGG | 7 cut(s) | 306, 923, 1058, 1158, 1528, 1666, 2318 |
| BssAI | RCCGGY | 1 cut(s) | 985 |
| BssECI | CCNNGG | 1 cut(s) | 2235 |
| BssMI | GATC | 7 cut(s) | 75, 882, 945, 1311, 1353, 1485, 1971 |
| BssNAI | GTATAC | 1 cut(s) | 282 |
| BssT1I | CCWWGG | 1 cut(s) | 2235 |
| Bst1107I | GTATAC | 1 cut(s) | 282 |
| Bst2UI | CCWGG | 1 cut(s) | 93 |
| Bst4CI | ACNGT | 4 cut(s) | 368, 934, 1033, 2033 |
| Bst6I | CTCTTC | 3 cut(s) | 1432, 1544, 2277 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 329, 1241, 1799 |
| BstC8I | GCNNGC | 2 cut(s) | 1246, 2392 |
| BstDEI | CTNAG | 5 cut(s) | 48, 727, 1357, 1933, 2379 |
| BstDSI | CCRYGG | 1 cut(s) | 2235 |
| BstF5I | GGATG | 5 cut(s) | 441, 755, 1500, 1911, 2144 |
| BstH2I | RGCGCY | 1 cut(s) | 1282 |
| BstHHI | GCGC | 3 cut(s) | 877, 1281, 2346 |
| BstKTI | GATC | 7 cut(s) | 78, 885, 948, 1314, 1356, 1488, 1974 |
| BstMAI | GTCTC | 9 cut(s) | 424, 528, 923, 962, 1022, 1122, 1894, 1954, 2369 |
| BstMBI | GATC | 7 cut(s) | 75, 882, 945, 1311, 1353, 1485, 1971 |
| BstNI | CCWGG | 1 cut(s) | 93 |
| BstSCI | CCNGG | 1 cut(s) | 91 |
| BstSFI | CTRYAG | 2 cut(s) | 111, 1578 |
| BstSLI | GKGCMC | 2 cut(s) | 444, 1914 |
| BstV1I | GCAGC | 9 cut(s) | 119, 769, 1064, 1288, 1517, 1564, 1586, 1592, 1858 |
| BstV2I | GAAGAC | 3 cut(s) | 981, 2014, 2183 |
| BstX2I | RGATCY | 2 cut(s) | 75, 882 |
| BstYI | RGATCY | 2 cut(s) | 75, 882 |
| BstZ17I | GTATAC | 1 cut(s) | 282 |
| BsuRI | GGCC | 6 cut(s) | 455, 1007, 1119, 1248, 1362, 1499 |
| BtgI | CCRYGG | 1 cut(s) | 2235 |
| BtsCI | GGATG | 5 cut(s) | 441, 755, 1500, 1911, 2144 |
| BtsI | GCAGTG | 1 cut(s) | 1800 |
| BtsIMutI | CAGTG | 6 cut(s) | 373, 1038, 1151, 1800, 1941, 2038 |
| BveI | ACCTGC | 1 cut(s) | 2134 |
| Cac8I | GCNNGC | 2 cut(s) | 1246, 2392 |
| CfoI | GCGC | 3 cut(s) | 877, 1281, 2346 |
| Cfr10I | RCCGGY | 1 cut(s) | 985 |
| Cfr13I | GGNCC | 1 cut(s) | 712 |
| Csp6I | GTAC | 6 cut(s) | 65, 632, 698, 935, 1084, 1930 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1093, 1128 |
| CviQI | GTAC | 6 cut(s) | 65, 632, 698, 935, 1084, 1930 |
| DdeI | CTNAG | 5 cut(s) | 48, 727, 1357, 1933, 2379 |
| DpnI | GATC | 7 cut(s) | 77, 884, 947, 1313, 1355, 1487, 1973 |
| DpnII | GATC | 7 cut(s) | 75, 882, 945, 1311, 1353, 1485, 1971 |
| DraI | TTTAAA | 3 cut(s) | 214, 831, 2218 |
| DraIII | CACNNNGTG | 1 cut(s) | 1226 |
| EaeI | YGGCCR | 1 cut(s) | 453 |
| Eam1104I | CTCTTC | 3 cut(s) | 1432, 1544, 2277 |
| EarI | CTCTTC | 3 cut(s) | 1432, 1544, 2277 |
| Ecl136II | GAGCTC | 1 cut(s) | 1846 |
| Eco130I | CCWWGG | 1 cut(s) | 2235 |
| Eco147I | AGGCCT | 1 cut(s) | 1007 |
| Eco24I | GRGCYC | 2 cut(s) | 807, 1848 |
| Eco31I | GGTCTC | 1 cut(s) | 1122 |
| Eco47I | GGWCC | 1 cut(s) | 712 |
| Eco47III | AGCGCT | 1 cut(s) | 1280 |
| Eco53kI | GAGCTC | 1 cut(s) | 1846 |
| Eco57I | CTGAAG | 4 cut(s) | 26, 863, 993, 1445 |
| EcoICRI | GAGCTC | 1 cut(s) | 1846 |
| EcoRII | CCWGG | 1 cut(s) | 91 |
| EcoT14I | CCWWGG | 1 cut(s) | 2235 |
| EcoT38I | GRGCYC | 2 cut(s) | 807, 1848 |
| ErhI | CCWWGG | 1 cut(s) | 2235 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1697, 1729 |
| FaqI | GGGAC | 4 cut(s) | 858, 935, 2253, 2330 |
| FauNDI | CATATG | 1 cut(s) | 1237 |
| FbaI | TGATCA | 2 cut(s) | 945, 1485 |
| FblI | GTMKAC | 1 cut(s) | 281 |
| FokI | GGATG | 5 cut(s) | 448, 762, 1507, 1918, 2151 |
| FriOI | GRGCYC | 2 cut(s) | 807, 1848 |
| FspBI | CTAG | 7 cut(s) | 68, 234, 269, 812, 1901, 2228, 2304 |
| GlaI | GCGC | 3 cut(s) | 876, 1280, 2345 |
| GsuI | CTGGAG | 2 cut(s) | 75, 1041 |
| HaeII | RGCGCY | 1 cut(s) | 1282 |
| HaeIII | GGCC | 6 cut(s) | 455, 1007, 1119, 1248, 1362, 1499 |
| HapII | CCGG | 2 cut(s) | 986, 1389 |
| HhaI | GCGC | 3 cut(s) | 877, 1281, 2346 |
| Hin6I | GCGC | 3 cut(s) | 875, 1279, 2344 |
| HinP1I | GCGC | 3 cut(s) | 875, 1279, 2344 |
| HincII | GTYRAC | 3 cut(s) | 311, 645, 2115 |
| HindII | GTYRAC | 3 cut(s) | 311, 645, 2115 |
| HindIII | AAGCTT | 2 cut(s) | 686, 1706 |
| HinfI | GANTC | 8 cut(s) | 272, 289, 417, 1090, 1408, 1887, 2293, 2377 |
| HpaI | GTTAAC | 2 cut(s) | 645, 2115 |
| HpaII | CCGG | 2 cut(s) | 986, 1389 |
| HphI | GGTGA | 3 cut(s) | 1000, 1093, 2158 |
| Hpy166II | GTNNAC | 7 cut(s) | 282, 311, 645, 1259, 1446, 1765, 2115 |
| Hpy188I | TCNGA | 7 cut(s) | 51, 882, 964, 1127, 1836, 2298, 2382 |
| Hpy188III | TCNNGA | 5 cut(s) | 556, 909, 1415, 1756, 2304 |
| Hpy8I | GTNNAC | 7 cut(s) | 282, 311, 645, 1259, 1446, 1765, 2115 |
| HpyAV | CCTTC | 6 cut(s) | 50, 1469, 1793, 1822, 2081, 2216 |
| HpyCH4III | ACNGT | 4 cut(s) | 368, 934, 1033, 2033 |
| HpyCH4IV | ACGT | 1 cut(s) | 1548 |
| HpyF3I | CTNAG | 5 cut(s) | 48, 727, 1357, 1933, 2379 |
| HpySE526I | ACGT | 1 cut(s) | 1548 |
| HspAI | GCGC | 3 cut(s) | 875, 1279, 2344 |
| KpnI | GGTACC | 1 cut(s) | 701 |
| Ksp22I | TGATCA | 2 cut(s) | 945, 1485 |
| KspAI | GTTAAC | 2 cut(s) | 645, 2115 |
| Kzo9I | GATC | 7 cut(s) | 75, 882, 945, 1311, 1353, 1485, 1971 |
| LguI | GCTCTTC | 1 cut(s) | 2277 |
| LmnI | GCTCC | 5 cut(s) | 94, 810, 1060, 1843, 2329 |
| Lsp1109I | GCAGC | 9 cut(s) | 119, 769, 1064, 1288, 1517, 1564, 1586, 1592, 1858 |
| MaeI | CTAG | 7 cut(s) | 68, 234, 269, 812, 1901, 2228, 2304 |
| MaeII | ACGT | 1 cut(s) | 1548 |
| MaeIII | GTNAC | 3 cut(s) | 610, 1099, 2080 |
| MalI | GATC | 7 cut(s) | 77, 884, 947, 1313, 1355, 1487, 1973 |
| MbiI | CCGCTC | 1 cut(s) | 452 |
| MboI | GATC | 7 cut(s) | 75, 882, 945, 1311, 1353, 1485, 1971 |
| MfeI | CAATTG | 2 cut(s) | 1206, 1611 |
| MflI | RGATCY | 2 cut(s) | 75, 882 |
| MhlI | GDGCHC | 5 cut(s) | 444, 807, 1848, 1914, 2272 |
| MlyI | GAGTC | 5 cut(s) | 281, 298, 426, 1896, 2371 |
| MmeI | TCCRAC | 4 cut(s) | 167, 721, 1840, 2110 |
| MroXI | GAANNNNTTC | 1 cut(s) | 397 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1307, 1493 |
| MspA1I | CMGCKG | 2 cut(s) | 110, 1577 |
| MspI | CCGG | 2 cut(s) | 986, 1389 |
| MspR9I | CCNGG | 1 cut(s) | 93 |
| MunI | CAATTG | 2 cut(s) | 1206, 1611 |
| Mva1269I | GAATGC | 3 cut(s) | 411, 596, 1881 |
| MvaI | CCWGG | 1 cut(s) | 93 |
| NcoI | CCATGG | 1 cut(s) | 2235 |
| NdeI | CATATG | 1 cut(s) | 1237 |
| NdeII | GATC | 7 cut(s) | 75, 882, 945, 1311, 1353, 1485, 1971 |
| NmuCI | GTSAC | 1 cut(s) | 1099 |
| OliI | CACNNNNGTG | 1 cut(s) | 1307 |
| PaqCI | CACCTGC | 1 cut(s) | 2134 |
| PceI | AGGCCT | 1 cut(s) | 1007 |
| PciSI | GCTCTTC | 1 cut(s) | 2277 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 206 |
| PctI | GAATGC | 3 cut(s) | 411, 596, 1881 |
| PdmI | GAANNNNTTC | 1 cut(s) | 397 |
| PfeI | GAWTC | 3 cut(s) | 1090, 1408, 2293 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 709 |
| PfoI | TCCNGGA | 1 cut(s) | 91 |
| PleI | GAGTC | 5 cut(s) | 280, 297, 425, 1895, 2371 |
| PpsI | GAGTC | 5 cut(s) | 280, 297, 425, 1895, 2371 |
| PsiI | TTATAA | 1 cut(s) | 120 |
| Psp124BI | GAGCTC | 1 cut(s) | 1848 |
| Psp1406I | AACGTT | 1 cut(s) | 1548 |
| Psp6I | CCWGG | 1 cut(s) | 91 |
| PspGI | CCWGG | 1 cut(s) | 91 |
| PspPI | GGNCC | 1 cut(s) | 712 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1619, 1651 |
| PstI | CTGCAG | 1 cut(s) | 1582 |
| PsuI | RGATCY | 2 cut(s) | 75, 882 |
| PvuII | CAGCTG | 2 cut(s) | 110, 1577 |
| RsaI | GTAC | 6 cut(s) | 66, 633, 699, 936, 1085, 1931 |
| RsaNI | GTAC | 6 cut(s) | 65, 632, 698, 935, 1084, 1930 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1307, 1493 |
| SacI | GAGCTC | 1 cut(s) | 1848 |
| SapI | GCTCTTC | 1 cut(s) | 2277 |
| Sau3AI | GATC | 7 cut(s) | 75, 882, 945, 1311, 1353, 1485, 1971 |
| Sau96I | GGNCC | 1 cut(s) | 712 |
| ScaI | AGTACT | 2 cut(s) | 1085, 1931 |
| SchI | GAGTC | 5 cut(s) | 281, 298, 426, 1896, 2371 |
| ScrFI | CCNGG | 1 cut(s) | 93 |
| SduI | GDGCHC | 5 cut(s) | 444, 807, 1848, 1914, 2272 |
| SfcI | CTRYAG | 2 cut(s) | 111, 1578 |
| SinI | GGWCC | 1 cut(s) | 712 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1307, 1493 |
| SmlI | CTYRAG | 1 cut(s) | 636 |
| SmoI | CTYRAG | 1 cut(s) | 636 |
| SseBI | AGGCCT | 1 cut(s) | 1007 |
| SsiI | CCGC | 2 cut(s) | 452, 1923 |
| SspI | AATATT | 1 cut(s) | 682 |
| SspMI | CTAG | 7 cut(s) | 68, 234, 269, 812, 1901, 2228, 2304 |
| SstI | GAGCTC | 1 cut(s) | 1848 |
| StuI | AGGCCT | 1 cut(s) | 1007 |
| StyD4I | CCNGG | 1 cut(s) | 91 |
| StyI | CCWWGG | 1 cut(s) | 2235 |
| TaaI | ACNGT | 4 cut(s) | 368, 934, 1033, 2033 |
| TaiI | ACGT | 1 cut(s) | 1551 |
| TaqI | TCGA | 3 cut(s) | 415, 1740, 1885 |
| TaqII | GACCGA | 1 cut(s) | 1003 |
| TatI | WGTACW | 2 cut(s) | 1083, 1929 |
| TauI | GCSGC | 1 cut(s) | 455 |
| TfiI | GAWTC | 3 cut(s) | 1090, 1408, 2293 |
| TscAI | CASTG | 6 cut(s) | 373, 1038, 1158, 1800, 1941, 2038 |
| TseFI | GTSAC | 1 cut(s) | 1099 |
| TseI | GCWGC | 9 cut(s) | 107, 782, 1052, 1276, 1505, 1574, 1577, 1580, 1871 |
| Tsp45I | GTSAC | 1 cut(s) | 1099 |
| TspGWI | ACGGA | 1 cut(s) | 232 |
| TspRI | CASTG | 6 cut(s) | 373, 1038, 1158, 1800, 1941, 2038 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 709 |
| VpaK11BI | GGWCC | 1 cut(s) | 712 |
| XapI | RAATTY | 3 cut(s) | 397, 775, 2164 |
| XbaI | TCTAGA | 1 cut(s) | 2303 |
| XmiI | GTMKAC | 1 cut(s) | 281 |
| XmnI | GAANNNNTTC | 1 cut(s) | 397 |
| XspI | CTAG | 7 cut(s) | 68, 234, 269, 812, 1901, 2228, 2304 |
| ZrmI | AGTACT | 2 cut(s) | 1085, 1931 |