RchiOBHm_Chr2g0095921

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
8893633 .. 8893980
348 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47089

Sequence Viewer

Length: 168 bp
ATGTCATCTGTTGCCAAAGTTCTCCTCTCTGTCCTCCTCCCATCCTTTCTCTTCTATTTCTTCCTCAACCCACCTCACCTCAATCCAAAAACCCTTCTCTCCTCTGCTAATTGCAGCAAGCTCCAATCCTTCGATGCCGCTAGAAAAACGTCCTCGAGACCGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

55

Amino Acids

6.09

Weight (kDa)

9.86

Isoelectric Point (pI)

61.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 138
AluBI AGCT 1 cut(s) 121
AluI AGCT 1 cut(s) 121
Alw26I GTCTC 1 cut(s) 151
Ama87I CYCGRG 1 cut(s) 154
ApeKI GCWGC 1 cut(s) 114
AsuHPI GGTGA 1 cut(s) 68
AvaI CYCGRG 1 cut(s) 154
BbvI GCAGC 1 cut(s) 126
BccI CCATC 1 cut(s) 49
BcoDI GTCTC 1 cut(s) 151
BfaI CTAG 1 cut(s) 141
BisI GCNGC 2 cut(s) 115, 138
BlsI GCNGC 2 cut(s) 116, 139
BmeT110I CYCGRG 1 cut(s) 154
BmsI GCATC 1 cut(s) 124
BsaI GGTCTC 1 cut(s) 151
BsaWI WCCGGW 1 cut(s) 160
BseGI GGATG 1 cut(s) 41
BseRI GAGGAG 3 cut(s) 14, 26, 91
BseXI GCAGC 1 cut(s) 126
BsiHKCI CYCGRG 1 cut(s) 154
BsiSI CCGG 1 cut(s) 161
BsmAI GTCTC 1 cut(s) 151
Bso31I GGTCTC 1 cut(s) 151
BsoBI CYCGRG 1 cut(s) 154
BspACI CCGC 1 cut(s) 138
BspTNI GGTCTC 1 cut(s) 151
Bst6I CTCTTC 1 cut(s) 56
BstC8I GCNNGC 1 cut(s) 119
BstF5I GGATG 1 cut(s) 41
BstMAI GTCTC 1 cut(s) 151
BstV1I GCAGC 1 cut(s) 126
BtsCI GGATG 1 cut(s) 41
Cac8I GCNNGC 1 cut(s) 119
CviJI RGCY 1 cut(s) 121
CviKI_1 RGCY 1 cut(s) 121
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
Eco31I GGTCTC 1 cut(s) 151
Eco88I CYCGRG 1 cut(s) 154
Fnu4HI GCNGC 2 cut(s) 115, 138
FokI GGATG 1 cut(s) 28
Fsp4HI GCNGC 2 cut(s) 115, 138
FspBI CTAG 1 cut(s) 141
GluI GCNGC 2 cut(s) 115, 138
HapII CCGG 1 cut(s) 161
HpaII CCGG 1 cut(s) 161
HphI GGTGA 1 cut(s) 68
Hpy188III TCNNGA 1 cut(s) 156
HpyAV CCTTC 2 cut(s) 104, 139
HpyCH4IV ACGT 1 cut(s) 149
HpyCH4V TGCA 1 cut(s) 114
HpySE526I ACGT 1 cut(s) 149
LmnI GCTCC 1 cut(s) 126
Lsp1109I GCAGC 1 cut(s) 126
LweI GCATC 1 cut(s) 124
MaeI CTAG 1 cut(s) 141
MaeII ACGT 1 cut(s) 149
MboII GAAGA 2 cut(s) 43, 52
MluCI AATT 1 cut(s) 109
MnlI CCTC 8 cut(s) 35, 44, 47, 74, 84, 89, 112, 163
MspI CCGG 1 cut(s) 161
PaeR7I CTCGAG 1 cut(s) 154
PkrI GCNGC 2 cut(s) 116, 139
SatI GCNGC 2 cut(s) 115, 138
SetI ASST 4 cut(s) 76, 81, 123, 152
SfaNI GCATC 1 cut(s) 124
Sfr274I CTCGAG 1 cut(s) 154
SgeI CNNG 2 cut(s) 130, 153
SlaI CTCGAG 1 cut(s) 154
SmlI CTYRAG 1 cut(s) 154
SmoI CTYRAG 1 cut(s) 154
Sse9I AATT 1 cut(s) 109
SsiI CCGC 1 cut(s) 138
SspMI CTAG 1 cut(s) 141
TaiI ACGT 1 cut(s) 152
TaqI TCGA 2 cut(s) 132, 155
TasI AATT 1 cut(s) 109
TauI GCSGC 1 cut(s) 140
TseI GCWGC 1 cut(s) 114
XhoI CTCGAG 1 cut(s) 154
XspI CTAG 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.