Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002603

Physical Location & Seq

Genomic Coordinates Reverse (-)

16680725 .. 16685484

Gene Structure 4760 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ37158

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGCCACCGCCCAACCCTCCGAGAACGGCTCCGCCAAGGCTCCGGAACCCGACCCGCGACCCGAACCCGTCACCGAAGCCGCCACAACTGCCGCGCCCCACTCCGACCCGTCCACCACTACAATCGATAACAACCAAAATCGGAACCCCGACTCCGAATCCGCTCCTTCCGAGGCTCCGGCGATGACTTCCAGCAGCGATGCCGTGTCCGCCGCCGATAAAAGATGGCCGGGGTGGCCCGGCGACTGTGTTTTCCGGCTGATTGTGCCGGTTCTTAAGGTCGGGAGCATTATCGGCCGGAAAGGCGAGCTCATTAAGAAGATGTGTGAGGAGACAAGAGCTCGCATTCGCGTCCTTGACGGCGCCGCAGGGACTACTGATCGCATCGTGCTGATCTCCGGAAGGGAAGAGCCAGAGGCTCCTCTTTCCCCTGCAATGGATGCTGTAATAAGAGTATTCAAACGTGTCGCTGGATTATCTGAGAGTGCAGGTGAGGCAGAGTTGTCTGGTGCTGCTGGAGTTGCATTCTGTTCCATCCGTTTGTTGGTAGCATCCACACAAGCGATTAATTTAATTGGAAAACAAGGATCATTAATCAAATCTATACAGGAGAGTACCGCTGCTTCTGTGCGAGTATTGTCTGGAGAAGAGGTTCCATTCTATGCTGCTGCTGATGAGAGGATTATTGAAATGCAGGGAGAAACCTTAAAGGTGCTCAAAGCTCTAGAAGCAGTAGTGTCTCACCTGAGGAAGTTTTTGGTCGATCATAGTGTTCTTCCTCTTTTTGAGAAAACTTACACTGCTCCAGTTTCTCAAGAACGCCAACCAGATCCTTGGGCTGACAAGTCGTTGCTTCATACTGCAACTCAAACTGGAGGTAGCACTAATTATCCTCTCACAGCTACGCGGGAATCTTTGTTTCTCAGCCGTGAGACGCAATTGGAATCACAACTCCCATCCTCTGGACTTTCCATTTATGGACAAGAGGCTTCTCTTTCTTCAATACGTTCTTCAGGACTTGGCCGTCCTGGTGCTCCTATTGTTACTCAGATTACGCAAACAATGCAAATTCCTCTGTCGTATGCTGAGGACATTATTGGAGTTGAAGGGAGGAGTATTGAATTTATTCGTCGTAGTAGTGGAGCCTTGTTAACTGTACAAGAGAGCAGGGGACTACCTGATGAAATTACAGTGGAAATAAAAGGCACCTCATCACAGGTTCAGGCGGCTCAACAACTGATTCAGGAAGTTATAGCAACCAGCAACAAGGATCAAATTCCAAGCAGCTATGGCAGGATGGATACCGGATTGAGGTCATCCTACTCTCAGTTAGATTCTATATCTTACCCTTCCTCTTCAGTATCCTCGCTACCTTATGATGCGTATGGAAATTCAATACCTTCACAACAACCTTATGGATCTTCCGGTCTAGGAGGAGGCTACAGCACATTCCGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0022414 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048367 GO:0048438 GO:0048467 GO:0048519 GO:0048577 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048587 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0090567 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:2000026 GO:2000028 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

486

Amino Acids

51.68

Weight (kDa)

5.14

Isoelectric Point (pI)

48.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	85 - 137	1.2e-12	KH domain
KH_1	PF00013	179 - 245	2.9e-10	KH domain
KH_1	PF00013	352 - 416	3.9e-11	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26000
fragaria_vesca	FvH4_4g07200
malus_domestica	MD13G1239500.v1.1 MD16G1248300.v1.1
prunus_persica	Prupe.1G074800_v2.0.a1
pyrus_communis	pycom16g20810
rosa_chinensis	RchiOBHm_Chr1g0313971 RchiOBHm_Chr2g0148541 RchiOBHm_Chr4g0399461 RchiOBHm_Chr5g0014711 RchiOBHm_Chr6g0261341
rosa_laevigata	RLG00000009266 RLG00000030564 RLG00000030569
rosa_multiflora	Rmu_sc0002255.1_g000002 Rmu_sc0002285.1_g000008 Rmu_sc0039997.1_g000001
rosa_roxburghii	Rroxscaffold_5G00344350
rosa_rugosa	Rorug04G0017100
rosa_samantha	Rh1AG125900 Rh1BG084500 Rh1CG119800 Rh2BG479200 Rh2CG224100 Rh2CG303100 Rh2DG228200 Rh2DG339000 Rh2DG488100 Rh4AG094900 Rh4BG092200 Rh4CG103100 Rh4DG087100 Rh4DG115200 Rh5BG489900 Rh5CG124300 Rh5CG332000 Rh5CG513700 Rh6CG106600
rosa_wichuraiana	Rw1G021120 Rw4G007800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	479
AasI	GACNNNNNNGTC	1 cut(s)	1023
Acc36I	ACCTGC	1 cut(s)	479
AccB1I	GGYRCC	2 cut(s)	362, 1205
AccB7I	CCANNNNNTGG	1 cut(s)	962
AccBSI	CCGCTC	1 cut(s)	164
AccII	CGCG	4 cut(s)	58, 95, 351, 907
AccIII	TCCGGA	2 cut(s)	43, 398
AclWI	GGATC	4 cut(s)	595, 824, 1278, 1426
AcoI	YGGCCR	4 cut(s)	3, 227, 295, 1021
AcsI	RAATTY	4 cut(s)	1068, 1121, 1275, 1390
AcuI	CTGAAG	2 cut(s)	996, 1341
AcyI	GRCGYC	1 cut(s)	363
AfaI	GTAC	2 cut(s)	616, 1158
AfiI	CCNNNNNNNGG	4 cut(s)	436, 544, 962, 1311
AflII	CTTAAG	1 cut(s)	275
AflIII	ACRYGT	1 cut(s)	463
AgsI	TTSAA	6 cut(s)	460, 689, 1002, 1106, 1121, 1395
AjnI	CCWGG	1 cut(s)	1027
AloI	GAACNNNNNNTCC	4 cut(s)	137, 169, 636, 668
AluBI	AGCT	5 cut(s)	310, 341, 722, 902, 1287
AluI	AGCT	5 cut(s)	310, 341, 722, 902, 1287
Alw21I	GWGCWC	4 cut(s)	312, 343, 717, 1036
Alw26I	GTCTC	3 cut(s)	326, 744, 926
AlwI	GGATC	4 cut(s)	595, 824, 1278, 1426
Aor13HI	TCCGGA	2 cut(s)	43, 398
AoxI	GGCC	5 cut(s)	3, 227, 236, 295, 1021
ApeKI	GCWGC	6 cut(s)	195, 512, 620, 665, 668, 1284
ApoI	RAATTY	4 cut(s)	1068, 1121, 1275, 1390
AseI	ATTAAT	2 cut(s)	567, 593
Asp700I	GAANNNNTTC	2 cut(s)	651, 1125
AspLEI	GCGC	2 cut(s)	97, 365
AspS9I	GGNCC	1 cut(s)	237
AsuC2I	CCSGG	2 cut(s)	231, 240
AsuHPI	GGTGA	3 cut(s)	64, 503, 734
AxyI	CCTNAGG	1 cut(s)	746
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	362, 1205
BanII	GRGCYC	2 cut(s)	312, 343
BarI	GAAGNNNNNNTAC	2 cut(s)	607, 639
Bbv12I	GWGCWC	4 cut(s)	312, 343, 717, 1036
BbvCI	CCTCAGC	1 cut(s)	1086
BbvI	GCAGC	6 cut(s)	207, 499, 607, 652, 655, 1296
BccI	CCATC	4 cut(s)	219, 542, 964, 1291
BceAI	ACGGC	5 cut(s)	43, 188, 376, 912, 1008
BciT130I	CCWGG	1 cut(s)	1029
BciVI	GTATCC	2 cut(s)	1294, 1372
BcnI	CCSGG	2 cut(s)	231, 240
BcoDI	GTCTC	3 cut(s)	326, 744, 926
BfaI	CTAG	2 cut(s)	725, 1430
BfmI	CTRYAG	1 cut(s)	1441
BfoI	RGCGCY	1 cut(s)	366
BfrI	CTTAAG	1 cut(s)	275
BfuAI	ACCTGC	1 cut(s)	479
BfuI	GTATCC	2 cut(s)	1294, 1372
BglI	GCCNNNNNGGC	2 cut(s)	235, 303
Bme1390I	CCNGG	3 cut(s)	231, 240, 1029
BmgT120I	GGNCC	1 cut(s)	237
BmrFI	CCNGG	3 cut(s)	231, 240, 1029
BmsI	GCATC	5 cut(s)	190, 393, 430, 560, 1369
BplI	GAGNNNNNCTC	2 cut(s)	14, 46
BpmI	CTGGAG	4 cut(s)	537, 663, 789, 894
Bpu10I	CCTNAGC	1 cut(s)	1086
BpuEI	CTTGAG	1 cut(s)	798
BpuMI	CCSGG	2 cut(s)	231, 240
Bsa29I	ATCGAT	1 cut(s)	126
BsaHI	GRCGYC	1 cut(s)	363
BsaJI	CCNNGG	4 cut(s)	36, 171, 230, 833
BsaWI	WCCGGW	4 cut(s)	43, 398, 1304, 1424
BsaXI	ACNNNNNCTCC	4 cut(s)	137, 167, 636, 666
Bsc4I	CCNNNNNNNGG	4 cut(s)	436, 544, 962, 1311
Bse118I	RCCGGY	1 cut(s)	268
Bse1I	ACTGG	2 cut(s)	806, 877
Bse21I	CCTNAGG	1 cut(s)	746
Bse3DI	GCAATG	1 cut(s)	441
BseAI	TCCGGA	2 cut(s)	43, 398
BseBI	CCWGG	1 cut(s)	1029
BseCI	ATCGAT	1 cut(s)	126
BseDI	CCNNGG	4 cut(s)	36, 171, 230, 833
BseGI	GGATG	6 cut(s)	445, 534, 551, 956, 1302, 1316
BseLI	CCNNNNNNNGG	4 cut(s)	436, 544, 962, 1311
BseMI	GCAATG	1 cut(s)	441
BseMII	CTCAG	6 cut(s)	471, 737, 937, 1061, 1077, 1340
BseNI	ACTGG	2 cut(s)	806, 877
BseRI	GAGGAG	4 cut(s)	344, 411, 1126, 1449
BseX3I	CGGCCG	1 cut(s)	295
BseXI	GCAGC	6 cut(s)	207, 499, 607, 652, 655, 1296
BsgI	GTGCAG	1 cut(s)	507
Bsh1236I	CGCG	4 cut(s)	58, 95, 351, 907
Bsh1285I	CGRYCG	1 cut(s)	298
BshFI	GGCC	5 cut(s)	5, 229, 238, 297, 1023
BshNI	GGYRCC	2 cut(s)	362, 1205
BshVI	ATCGAT	1 cut(s)	126
BsiEI	CGRYCG	1 cut(s)	298
BsiHKAI	GWGCWC	4 cut(s)	312, 343, 717, 1036
BslFI	GGGAC	2 cut(s)	385, 1185
BslI	CCNNNNNNNGG	4 cut(s)	436, 544, 962, 1311
BsmAI	GTCTC	3 cut(s)	326, 744, 926
BsmBI	CGTCTC	1 cut(s)	926
BsmFI	GGGAC	2 cut(s)	385, 1185
BsmI	GAATGC	2 cut(s)	345, 524
BsnI	GGCC	5 cut(s)	5, 229, 238, 297, 1023
Bsp1286I	GDGCHC	4 cut(s)	312, 343, 717, 1036
Bsp13I	TCCGGA	2 cut(s)	43, 398
Bsp1407I	TGTACA	1 cut(s)	1156
Bsp143I	GATC	7 cut(s)	379, 393, 587, 763, 829, 1270, 1418
BspANI	GGCC	5 cut(s)	5, 229, 238, 297, 1023
BspCNI	CTCAG	6 cut(s)	472, 738, 936, 1060, 1078, 1339
BspDI	ATCGAT	1 cut(s)	126
BspEI	TCCGGA	2 cut(s)	43, 398
BspFNI	CGCG	4 cut(s)	58, 95, 351, 907
BspMI	ACCTGC	1 cut(s)	479
BspPI	GGATC	4 cut(s)	595, 824, 1278, 1426
BspQI	GCTCTTC	1 cut(s)	402
BspT107I	GGYRCC	2 cut(s)	362, 1205
BspTI	CTTAAG	1 cut(s)	275
BsrBI	CCGCTC	1 cut(s)	164
BsrDI	GCAATG	1 cut(s)	441
BsrFI	RCCGGY	1 cut(s)	268
BsrGI	TGTACA	1 cut(s)	1156
BsrI	ACTGG	2 cut(s)	806, 877
BssAI	RCCGGY	1 cut(s)	268
BssECI	CCNNGG	4 cut(s)	36, 171, 230, 833
BssMI	GATC	7 cut(s)	379, 393, 587, 763, 829, 1270, 1418
BssNI	GRCGYC	1 cut(s)	363
BssT1I	CCWWGG	2 cut(s)	36, 833
Bst2UI	CCWGG	1 cut(s)	1029
Bst4CI	ACNGT	3 cut(s)	248, 1156, 1192
Bst6I	CTCTTC	3 cut(s)	402, 642, 1360
BstACI	GRCGYC	1 cut(s)	363
BstAFI	CTTAAG	1 cut(s)	275
BstAPI	GCANNNNNTGC	2 cut(s)	440, 1063
BstAUI	TGTACA	1 cut(s)	1156
BstC8I	GCNNGC	2 cut(s)	308, 343
BstDEI	CTNAG	6 cut(s)	480, 746, 923, 1047, 1086, 1326
BstF5I	GGATG	6 cut(s)	445, 534, 551, 956, 1302, 1316
BstFNI	CGCG	4 cut(s)	58, 95, 351, 907
BstH2I	RGCGCY	1 cut(s)	366
BstHHI	GCGC	2 cut(s)	97, 365
BstKTI	GATC	7 cut(s)	382, 396, 590, 766, 832, 1273, 1421
BstMAI	GTCTC	3 cut(s)	326, 744, 926
BstMBI	GATC	7 cut(s)	379, 393, 587, 763, 829, 1270, 1418
BstMCI	CGRYCG	1 cut(s)	298
BstNI	CCWGG	1 cut(s)	1029
BstSCI	CCNGG	3 cut(s)	229, 238, 1027
BstSFI	CTRYAG	1 cut(s)	1441
BstUI	CGCG	4 cut(s)	58, 95, 351, 907
BstV1I	GCAGC	6 cut(s)	207, 499, 607, 652, 655, 1296
BstX2I	RGATCY	2 cut(s)	829, 1418
BstXI	CCANNNNNNTGG	1 cut(s)	834
BstYI	RGATCY	2 cut(s)	829, 1418
BstZI	CGGCCG	1 cut(s)	295
Bsu15I	ATCGAT	1 cut(s)	126
Bsu36I	CCTNAGG	1 cut(s)	746
BsuI	GTATCC	2 cut(s)	1294, 1372
BsuRI	GGCC	5 cut(s)	5, 229, 238, 297, 1023
BsuTUI	ATCGAT	1 cut(s)	126
BtgZI	GCGATG	2 cut(s)	197, 213
BtsCI	GGATG	6 cut(s)	445, 534, 551, 956, 1302, 1316
BtsI	GCAGTG	1 cut(s)	798
BtsIMutI	CAGTG	2 cut(s)	798, 1197
BveI	ACCTGC	1 cut(s)	479
Cac8I	GCNNGC	2 cut(s)	308, 343
CfoI	GCGC	2 cut(s)	97, 365
Cfr10I	RCCGGY	1 cut(s)	268
Cfr13I	GGNCC	1 cut(s)	237
ClaI	ATCGAT	1 cut(s)	126
CseI	GACGC	2 cut(s)	340, 943
Csp6I	GTAC	2 cut(s)	615, 1157
CviQI	GTAC	2 cut(s)	615, 1157
DdeI	CTNAG	6 cut(s)	480, 746, 923, 1047, 1086, 1326
DinI	GGCGCC	1 cut(s)	364
DpnI	GATC	7 cut(s)	381, 395, 589, 765, 831, 1272, 1420
DpnII	GATC	7 cut(s)	379, 393, 587, 763, 829, 1270, 1418
DrdI	GACNNNNNNGTC	1 cut(s)	1023
DseDI	GACNNNNNNGTC	1 cut(s)	1023
EaeI	YGGCCR	4 cut(s)	3, 227, 295, 1021
EagI	CGGCCG	1 cut(s)	295
Eam1104I	CTCTTC	3 cut(s)	402, 642, 1360
EarI	CTCTTC	3 cut(s)	402, 642, 1360
EciI	GGCGGA	2 cut(s)	22, 199
Ecl136II	GAGCTC	2 cut(s)	310, 341
EclXI	CGGCCG	1 cut(s)	295
Eco130I	CCWWGG	2 cut(s)	36, 833
Eco24I	GRGCYC	2 cut(s)	312, 343
Eco52I	CGGCCG	1 cut(s)	295
Eco53kI	GAGCTC	2 cut(s)	310, 341
Eco57I	CTGAAG	2 cut(s)	996, 1341
Eco81I	CCTNAGG	1 cut(s)	746
EcoICRI	GAGCTC	2 cut(s)	310, 341
EcoRII	CCWGG	1 cut(s)	1027
EcoT14I	CCWWGG	2 cut(s)	36, 833
EcoT38I	GRGCYC	2 cut(s)	312, 343
EgeI	GGCGCC	1 cut(s)	364
EheI	GGCGCC	1 cut(s)	364
ErhI	CCWWGG	2 cut(s)	36, 833
Esp3I	CGTCTC	1 cut(s)	926
FaqI	GGGAC	2 cut(s)	385, 1185
FauI	CCCGC	2 cut(s)	63, 900
FokI	GGATG	6 cut(s)	452, 521, 538, 943, 1303, 1309
FriOI	GRGCYC	2 cut(s)	312, 343
FspBI	CTAG	2 cut(s)	725, 1430
GlaI	GCGC	2 cut(s)	96, 364
GsuI	CTGGAG	4 cut(s)	537, 663, 789, 894
HaeII	RGCGCY	1 cut(s)	366
HaeIII	GGCC	5 cut(s)	5, 229, 238, 297, 1023
HgaI	GACGC	2 cut(s)	340, 943
HhaI	GCGC	2 cut(s)	97, 365
Hin1I	GRCGYC	1 cut(s)	363
Hin6I	GCGC	2 cut(s)	95, 363
HinP1I	GCGC	2 cut(s)	95, 363
HincII	GTYRAC	1 cut(s)	1152
HindII	GTYRAC	1 cut(s)	1152
HinfI	GANTC	6 cut(s)	152, 158, 911, 944, 1240, 1334
HpaI	GTTAAC	1 cut(s)	1152
HphI	GGTGA	3 cut(s)	64, 503, 734
Hpy166II	GTNNAC	2 cut(s)	114, 1152
Hpy188I	TCNGA	7 cut(s)	22, 106, 144, 157, 172, 481, 1050
Hpy188III	TCNNGA	9 cut(s)	44, 283, 399, 642, 725, 815, 963, 1014, 1244
Hpy8I	GTNNAC	2 cut(s)	114, 1152
Hpy99I	CGWCG	1 cut(s)	1134
HpyAV	CCTTC	5 cut(s)	177, 396, 1100, 1359, 1410
HpyCH4III	ACNGT	3 cut(s)	248, 1156, 1192
HpyCH4IV	ACGT	2 cut(s)	463, 1006
HpyCH4V	TGCA	6 cut(s)	434, 488, 524, 694, 863, 1066
HpyF3I	CTNAG	6 cut(s)	480, 746, 923, 1047, 1086, 1326
HpySE526I	ACGT	2 cut(s)	463, 1006
Hsp92I	GRCGYC	1 cut(s)	363
HspAI	GCGC	2 cut(s)	95, 363
KasI	GGCGCC	1 cut(s)	362
Kpn2I	TCCGGA	2 cut(s)	43, 398
KspAI	GTTAAC	1 cut(s)	1152
Kzo9I	GATC	7 cut(s)	379, 393, 587, 763, 829, 1270, 1418
LguI	GCTCTTC	1 cut(s)	402
LmnI	GCTCC	9 cut(s)	35, 46, 169, 181, 285, 424, 808, 1039, 1142
Lsp1109I	GCAGC	6 cut(s)	207, 499, 607, 652, 655, 1296
LweI	GCATC	5 cut(s)	190, 393, 430, 560, 1369
MaeI	CTAG	2 cut(s)	725, 1430
MaeII	ACGT	2 cut(s)	463, 1006
MaeIII	GTNAC	2 cut(s)	70, 1042
MalI	GATC	7 cut(s)	381, 395, 589, 765, 831, 1272, 1420
MbiI	CCGCTC	1 cut(s)	164
MboI	GATC	7 cut(s)	379, 393, 587, 763, 829, 1270, 1418
MboII	GAAGA	8 cut(s)	331, 419, 659, 767, 990, 1002, 1347, 1413
MfeI	CAATTG	1 cut(s)	938
MflI	RGATCY	2 cut(s)	829, 1418
MhlI	GDGCHC	4 cut(s)	312, 343, 717, 1036
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	568, 573, 886, 938, 1068, 1121, 1185, 1275, 1390
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	363
MlyI	GAGTC	1 cut(s)	146
MmeI	TCCRAC	1 cut(s)	129
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	2 cut(s)	43, 398
MroXI	GAANNNNTTC	2 cut(s)	651, 1125
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	276, 315, 567, 572, 593, 707, 1151
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	620
MspCI	CTTAAG	1 cut(s)	275
MspR9I	CCNGG	3 cut(s)	231, 240, 1029
MunI	CAATTG	1 cut(s)	938
Mva1269I	GAATGC	2 cut(s)	345, 524
MvaI	CCWGG	1 cut(s)	1029
MvnI	CGCG	4 cut(s)	58, 95, 351, 907
NarI	GGCGCC	1 cut(s)	363
NciI	CCSGG	2 cut(s)	231, 240
NdeII	GATC	7 cut(s)	379, 393, 587, 763, 829, 1270, 1418
NmuCI	GTSAC	1 cut(s)	70
PaqCI	CACCTGC	1 cut(s)	479
PciSI	GCTCTTC	1 cut(s)	402
PctI	GAATGC	2 cut(s)	345, 524
PdmI	GAANNNNTTC	2 cut(s)	651, 1125
PfeI	GAWTC	5 cut(s)	158, 911, 944, 1240, 1334
PflMI	CCANNNNNTGG	1 cut(s)	962
PleI	GAGTC	1 cut(s)	146
PluTI	GGCGCC	1 cut(s)	366
PpsI	GAGTC	1 cut(s)	146
PshBI	ATTAAT	2 cut(s)	567, 593
Psp124BI	GAGCTC	2 cut(s)	312, 343
Psp6I	CCWGG	1 cut(s)	1027
PspGI	CCWGG	1 cut(s)	1027
PspPI	GGNCC	1 cut(s)	237
PsuI	RGATCY	2 cut(s)	829, 1418
RsaI	GTAC	2 cut(s)	616, 1158
RsaNI	GTAC	2 cut(s)	615, 1157
SacI	GAGCTC	2 cut(s)	312, 343
SapI	GCTCTTC	1 cut(s)	402
SaqAI	TTAA	7 cut(s)	276, 315, 567, 572, 593, 707, 1151
Sau3AI	GATC	7 cut(s)	379, 393, 587, 763, 829, 1270, 1418
Sau96I	GGNCC	1 cut(s)	237
SchI	GAGTC	1 cut(s)	146
ScrFI	CCNGG	3 cut(s)	231, 240, 1029
SduI	GDGCHC	4 cut(s)	312, 343, 717, 1036
SfaNI	GCATC	5 cut(s)	190, 393, 430, 560, 1369
SfcI	CTRYAG	1 cut(s)	1441
SfiI	GGCCNNNNNGGCC	1 cut(s)	235
SfoI	GGCGCC	1 cut(s)	364
SmlI	CTYRAG	2 cut(s)	275, 813
SmoI	CTYRAG	2 cut(s)	275, 813
Sse9I	AATT	9 cut(s)	568, 573, 886, 938, 1068, 1121, 1185, 1275, 1390
SspDI	GGCGCC	1 cut(s)	362
SspMI	CTAG	2 cut(s)	725, 1430
SstI	GAGCTC	2 cut(s)	312, 343
StyD4I	CCNGG	3 cut(s)	229, 238, 1027
StyI	CCWWGG	2 cut(s)	36, 833
TaaI	ACNGT	3 cut(s)	248, 1156, 1192
TaiI	ACGT	2 cut(s)	466, 1009
TaqI	TCGA	2 cut(s)	126, 762
TasI	AATT	9 cut(s)	568, 573, 886, 938, 1068, 1121, 1185, 1275, 1390
TatI	WGTACW	1 cut(s)	1156
TauI	GCSGC	5 cut(s)	83, 95, 215, 368, 1229
TfiI	GAWTC	5 cut(s)	158, 911, 944, 1240, 1334
Tru1I	TTAA	7 cut(s)	276, 315, 567, 572, 593, 707, 1151
Tru9I	TTAA	7 cut(s)	276, 315, 567, 572, 593, 707, 1151
TscAI	CASTG	2 cut(s)	805, 1197
TseFI	GTSAC	1 cut(s)	70
TseI	GCWGC	6 cut(s)	195, 512, 620, 665, 668, 1284
Tsp45I	GTSAC	1 cut(s)	70
TspDTI	ATGAA	2 cut(s)	845, 1197
TspGWI	ACGGA	1 cut(s)	527
TspRI	CASTG	2 cut(s)	805, 1197
Van91I	CCANNNNNTGG	1 cut(s)	962
Vha464I	CTTAAG	1 cut(s)	275
VspI	ATTAAT	2 cut(s)	567, 593
XapI	RAATTY	4 cut(s)	1068, 1121, 1275, 1390
XbaI	TCTAGA	1 cut(s)	724
XcmI	CCANNNNNNNNNTGG	1 cut(s)	541
XmnI	GAANNNNTTC	2 cut(s)	651, 1125
XspI	CTAG	2 cut(s)	725, 1430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.