Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002603

Physical Location & Seq

Genomic Coordinates Reverse (-)

35597446 .. 35610073

Gene Structure 12628 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG303100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGAGGCCACGATGCCCATTTGCAAGACTGTTACTCCAACTCACCAGAGAGGCTTTATTAGAAGAAGAGCTGCTGAACGTGGAGACCAAATCAAAGTATTGCTTGACCAACAAGAGAGGTTGTATGAAAGACAATCTGAACTACAAGCTCTACTGGAAGCTTCCAAAGGTCTTGGACGCCCTATTAATGGGGCTTCAACAGCCACAAAAGGCTGGAGGCCGAGAATGCTAAGGTTTCCGATGAAATTTGAGGGCCTCGTTCGAACCCATGAGGAAGTTTGTACATGGAAAAGAAAATCTGCATCCAACTTCTTTCCCTGCCAAGAACAAATCCGAGGTGTTTATGTTGAGAATCGGTGCTCGGATAAAATCACTCAGCTCATGGATAATGTCTACGTCTGTCACTCTGGATCGGCTGCAGATTCTCAGGTTGTTTTGGACTATGTGAGGCACTTTCTTCATCAGCACACCATTCAGCTATGGCAGCCTGCTACTGTCAAAGTTGTTGCTAATCTCATCAGGCTACTGTCATATGGCGGCACAGTCATAAAGGCGCCATTTGCCATTGGAGGTTCTGGCTCCAGTTACTTGTATGGATTCTTTGATCAAGCATGGAGAGAAGGAATGACCAAGGACGAAGCGGAGCCAGAGGCTCCTCTTTCCCCTGCAATGGATGCTGTAATAAGAGTATTCAAACGTGTCGCTGGATTATCTAAGAGTGCAGGCGAGGCAGAGTTGTCTGGTGCTGCTGGAGTTGCATTCTGTTCCATCCGTTTGTTGGTAGCATCCACACAAGCGATTAATTTAATTGGAAAACAAGGATCATTAATCAAATCTATACAGGAGAGTACCGCTGCTTCTGTGCGAGTATTGTATGGAGAAGAGGTTCCATTCTATGCTGCCGCTGATGAGAGGATTATTGAAATGCAGGGAGAAATCTTAAAGGTGCTCAAAGCTCTAGAAGCAGTAGTGTCTCACCTGAGGAAGTTTTTGGTTGATCATAGTGTTCTTCCTCTTTTTGAGAAAACTTACACTGCTCCAGTTTCTCAAGAACGCCAACCAGATCCCTGGGCTAACAAGTCGTTGCTTCATACTGCAACTCAAACTGGAGGTGGCACTAATTATCCTCTCACAGCTACACGGGAATCTTTGTTTCTCAGCCATGAGTCGCAATTGGAATCACAACTCCCATCCTCTGGACTTTCCATTTATGGACAAGAGGCTTCTCTTTCTTCAATACATTCTTCAGGACTTGGCCGTCCTGGTGCTCCTATTGTTACTCAGATTACTCAAACAATGCAAATTCCTCTGTCTTATGCTGAGGACATTATTGGGGTTGAAGAAAGGAGTATTGAATTTATTAGTCGTAGTAGTGGAGCCTTGTTAACTGTACAAGAGAGCAGGGGACTACCTGATGAAATTACAGTGGAAATAAAAGGCACCTCATCACAGGTTCAGGTGGCTCAACAACTGATTCAGGAAGTTATAGCAACCAGCAACAAGGATCAAATTCCAAGCACCTATGGCAGGATGGATACAAGATTGAGGACATCCTACTCTCAGTTAGATTCTATATCTTACCCTTCCTCTTCAGTATCCTCGCTACCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0022414 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048367 GO:0048438 GO:0048467 GO:0048519 GO:0048577 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048587 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0090567 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:2000026 GO:2000028 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

536

Amino Acids

58.93

Weight (kDa)

7.17

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Proteasome	PF00227	115 - 175	3e-07	Proteasome subunit
KH_1	PF00013	257 - 323	1.6e-09	KH domain
KH_1	PF00013	430 - 494	4.9e-08	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26000
fragaria_vesca	FvH4_4g07200
malus_domestica	MD13G1239500.v1.1 MD16G1248300.v1.1
prunus_persica	Prupe.1G074800_v2.0.a1
pyrus_communis	pycom16g20810
rosa_chinensis	RchiOBHm_Chr1g0313971 RchiOBHm_Chr2g0148541 RchiOBHm_Chr4g0399461 RchiOBHm_Chr5g0014711 RchiOBHm_Chr6g0261341
rosa_laevigata	RLG00000009266 RLG00000030564 RLG00000030569
rosa_multiflora	Rmu_sc0002255.1_g000002 Rmu_sc0002285.1_g000008 Rmu_sc0039997.1_g000001
rosa_roxburghii	Rroxscaffold_5G00344350
rosa_rugosa	Rorug04G0017100
rosa_samantha	Rh1AG125900 Rh1BG084500 Rh1CG119800 Rh2BG479200 Rh2CG224100 Rh2CG303100 Rh2DG228200 Rh2DG339000 Rh2DG488100 Rh4AG094900 Rh4BG092200 Rh4CG103100 Rh4DG087100 Rh4DG115200 Rh5BG489900 Rh5CG124300 Rh5CG332000 Rh5CG513700 Rh6CG106600
rosa_wichuraiana	Rw1G021120 Rw4G007800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1257
AccB1I	GGYRCC	2 cut(s)	553, 1439
AccB7I	CCANNNNNTGG	1 cut(s)	1196
AccI	GTMKAC	1 cut(s)	393
AciI	CCGC	4 cut(s)	537, 641, 852, 903
AclWI	GGATC	4 cut(s)	418, 829, 1058, 1512
AcoI	YGGCCR	1 cut(s)	1255
AcsI	RAATTY	4 cut(s)	245, 1302, 1355, 1509
AcuI	CTGAAG	2 cut(s)	1230, 1575
AcyI	GRCGYC	2 cut(s)	178, 554
AfaI	GTAC	3 cut(s)	283, 850, 1392
AfiI	CCNNNNNNNGG	5 cut(s)	188, 670, 778, 1196, 1527
AflIII	ACRYGT	1 cut(s)	697
AgsI	TTSAA	6 cut(s)	198, 694, 923, 1236, 1340, 1355
AjnI	CCWGG	2 cut(s)	1067, 1261
AloI	GAACNNNNNNTCC	2 cut(s)	870, 902
AluBI	AGCT	7 cut(s)	71, 149, 161, 379, 478, 956, 1136
AluI	AGCT	7 cut(s)	71, 149, 161, 379, 478, 956, 1136
Alw21I	GWGCWC	3 cut(s)	362, 951, 1270
Alw26I	GTCTC	2 cut(s)	78, 978
AlwI	GGATC	4 cut(s)	418, 829, 1058, 1512
AoxI	GGCC	4 cut(s)	6, 218, 253, 1255
ApeKI	GCWGC	6 cut(s)	71, 416, 484, 746, 854, 899
ApoI	RAATTY	4 cut(s)	245, 1302, 1355, 1509
AseI	ATTAAT	3 cut(s)	186, 801, 827
Asp700I	GAANNNNTTC	1 cut(s)	885
AspLEI	GCGC	1 cut(s)	556
AspS9I	GGNCC	1 cut(s)	253
AsuHPI	GGTGA	2 cut(s)	35, 968
AsuII	TTCGAA	1 cut(s)	262
AxyI	CCTNAGG	1 cut(s)	980
BanI	GGYRCC	2 cut(s)	553, 1439
BarI	GAAGNNNNNNTAC	2 cut(s)	841, 873
Bbv12I	GWGCWC	3 cut(s)	362, 951, 1270
BbvCI	CCTCAGC	1 cut(s)	1320
BbvI	GCAGC	6 cut(s)	58, 403, 496, 733, 841, 886
BccI	CCATC	3 cut(s)	776, 1198, 1525
BceAI	ACGGC	1 cut(s)	1242
BciT130I	CCWGG	2 cut(s)	1069, 1263
BciVI	GTATCC	2 cut(s)	1528, 1606
BclI	TGATCA	2 cut(s)	604, 997
BcoDI	GTCTC	2 cut(s)	78, 978
BfaI	CTAG	1 cut(s)	959
BfmI	CTRYAG	1 cut(s)	417
BfoI	RGCGCY	1 cut(s)	557
BfuI	GTATCC	2 cut(s)	1528, 1606
BisI	GCNGC	8 cut(s)	72, 417, 485, 538, 747, 855, 900, 903
BlsI	GCNGC	8 cut(s)	73, 418, 486, 539, 748, 856, 901, 904
Bme1390I	CCNGG	2 cut(s)	1069, 1263
BmgT120I	GGNCC	1 cut(s)	253
BmiI	GGNNCC	7 cut(s)	555, 580, 645, 654, 888, 1378, 1441
BmrFI	CCNGG	2 cut(s)	1069, 1263
BmsI	GCATC	4 cut(s)	3, 311, 664, 794
BpmI	CTGGAG	5 cut(s)	235, 565, 771, 1023, 1128
Bpu10I	CCTNAGC	2 cut(s)	230, 1320
Bpu14I	TTCGAA	1 cut(s)	262
BpuEI	CTTGAG	1 cut(s)	1032
BsaHI	GRCGYC	2 cut(s)	178, 554
BsaI	GGTCTC	1 cut(s)	78
BsaJI	CCNNGG	4 cut(s)	334, 630, 1067, 1068
BsaXI	ACNNNNNCTCC	4 cut(s)	19, 49, 870, 900
Bsc4I	CCNNNNNNNGG	5 cut(s)	188, 670, 778, 1196, 1527
Bse1I	ACTGG	4 cut(s)	159, 582, 1040, 1111
Bse21I	CCTNAGG	1 cut(s)	980
Bse3DI	GCAATG	1 cut(s)	675
BseBI	CCWGG	2 cut(s)	1069, 1263
BseDI	CCNNGG	4 cut(s)	334, 630, 1067, 1068
BseGI	GGATG	7 cut(s)	302, 679, 768, 785, 1190, 1536, 1550
BseLI	CCNNNNNNNGG	5 cut(s)	188, 670, 778, 1196, 1527
BseMI	GCAATG	1 cut(s)	675
BseMII	CTCAG	7 cut(s)	389, 440, 971, 1171, 1295, 1311, 1574
BseNI	ACTGG	4 cut(s)	159, 582, 1040, 1111
BseRI	GAGGAG	1 cut(s)	645
BseXI	GCAGC	6 cut(s)	58, 403, 496, 733, 841, 886
BsgI	GTGCAG	1 cut(s)	741
BshFI	GGCC	4 cut(s)	8, 220, 255, 1257
BshNI	GGYRCC	2 cut(s)	553, 1439
BsiHKAI	GWGCWC	3 cut(s)	362, 951, 1270
BslFI	GGGAC	1 cut(s)	1419
BslI	CCNNNNNNNGG	5 cut(s)	188, 670, 778, 1196, 1527
BsmAI	GTCTC	2 cut(s)	78, 978
BsmFI	GGGAC	1 cut(s)	1419
BsmI	GAATGC	2 cut(s)	231, 758
BsnI	GGCC	4 cut(s)	8, 220, 255, 1257
Bso31I	GGTCTC	1 cut(s)	78
Bsp119I	TTCGAA	1 cut(s)	262
Bsp1286I	GDGCHC	3 cut(s)	362, 951, 1270
Bsp1407I	TGTACA	2 cut(s)	281, 1390
Bsp143I	GATC	6 cut(s)	410, 604, 821, 997, 1063, 1504
BspACI	CCGC	4 cut(s)	537, 641, 852, 903
BspANI	GGCC	4 cut(s)	8, 220, 255, 1257
BspCNI	CTCAG	7 cut(s)	388, 439, 972, 1170, 1294, 1312, 1573
BspLI	GGNNCC	7 cut(s)	555, 580, 645, 654, 888, 1378, 1441
BspMAI	CTGCAG	1 cut(s)	421
BspPI	GGATC	4 cut(s)	418, 829, 1058, 1512
BspQI	GCTCTTC	1 cut(s)	61
BspT104I	TTCGAA	1 cut(s)	262
BspT107I	GGYRCC	2 cut(s)	553, 1439
BspTNI	GGTCTC	1 cut(s)	78
BsrDI	GCAATG	1 cut(s)	675
BsrGI	TGTACA	2 cut(s)	281, 1390
BsrI	ACTGG	4 cut(s)	159, 582, 1040, 1111
BssECI	CCNNGG	4 cut(s)	334, 630, 1067, 1068
BssMI	GATC	6 cut(s)	410, 604, 821, 997, 1063, 1504
BssNI	GRCGYC	2 cut(s)	178, 554
BssT1I	CCWWGG	1 cut(s)	630
Bst2UI	CCWGG	2 cut(s)	1069, 1263
Bst4CI	ACNGT	6 cut(s)	31, 496, 528, 544, 1390, 1426
Bst6I	CTCTTC	3 cut(s)	61, 876, 1594
BstACI	GRCGYC	2 cut(s)	178, 554
BstAPI	GCANNNNNTGC	1 cut(s)	674
BstAUI	TGTACA	2 cut(s)	281, 1390
BstBI	TTCGAA	1 cut(s)	262
BstC8I	GCNNGC	2 cut(s)	489, 724
BstDEI	CTNAG	9 cut(s)	230, 375, 426, 714, 980, 1157, 1281, 1320, 1560
BstENI	CCTNNNNNAGG	1 cut(s)	1525
BstF5I	GGATG	7 cut(s)	302, 679, 768, 785, 1190, 1536, 1550
BstH2I	RGCGCY	1 cut(s)	557
BstHHI	GCGC	1 cut(s)	556
BstKTI	GATC	6 cut(s)	413, 607, 824, 1000, 1066, 1507
BstMAI	GTCTC	2 cut(s)	78, 978
BstMBI	GATC	6 cut(s)	410, 604, 821, 997, 1063, 1504
BstMWI	GCNNNNNNNGC	9 cut(s)	200, 226, 484, 560, 674, 728, 755, 962, 1524
BstNI	CCWGG	2 cut(s)	1069, 1263
BstSCI	CCNGG	2 cut(s)	1067, 1261
BstSFI	CTRYAG	1 cut(s)	417
BstV1I	GCAGC	6 cut(s)	58, 403, 496, 733, 841, 886
BstX2I	RGATCY	1 cut(s)	1063
BstXI	CCANNNNNNTGG	1 cut(s)	1068
BstYI	RGATCY	1 cut(s)	1063
Bsu36I	CCTNAGG	1 cut(s)	980
BsuI	GTATCC	2 cut(s)	1528, 1606
BsuRI	GGCC	4 cut(s)	8, 220, 255, 1257
BtsCI	GGATG	7 cut(s)	302, 679, 768, 785, 1190, 1536, 1550
BtsI	GCAGTG	1 cut(s)	1032
BtsIMutI	CAGTG	2 cut(s)	1032, 1431
Cac8I	GCNNGC	2 cut(s)	489, 724
CfoI	GCGC	1 cut(s)	556
Cfr13I	GGNCC	1 cut(s)	253
CseI	GACGC	1 cut(s)	186
Csp6I	GTAC	3 cut(s)	282, 849, 1391
CviAII	CATG	5 cut(s)	269, 285, 382, 612, 1163
CviQI	GTAC	3 cut(s)	282, 849, 1391
DdeI	CTNAG	9 cut(s)	230, 375, 426, 714, 980, 1157, 1281, 1320, 1560
DinI	GGCGCC	1 cut(s)	555
DpnI	GATC	6 cut(s)	412, 606, 823, 999, 1065, 1506
DpnII	GATC	6 cut(s)	410, 604, 821, 997, 1063, 1504
DrdI	GACNNNNNNGTC	1 cut(s)	1257
DseDI	GACNNNNNNGTC	1 cut(s)	1257
EaeI	YGGCCR	1 cut(s)	1255
Eam1104I	CTCTTC	3 cut(s)	61, 876, 1594
EarI	CTCTTC	3 cut(s)	61, 876, 1594
Eco130I	CCWWGG	1 cut(s)	630
Eco31I	GGTCTC	1 cut(s)	78
Eco57I	CTGAAG	2 cut(s)	1230, 1575
Eco81I	CCTNAGG	1 cut(s)	980
EcoNI	CCTNNNNNAGG	1 cut(s)	1525
EcoO109I	RGGNCCY	1 cut(s)	253
EcoRII	CCWGG	2 cut(s)	1067, 1261
EcoT14I	CCWWGG	1 cut(s)	630
EgeI	GGCGCC	1 cut(s)	555
EheI	GGCGCC	1 cut(s)	555
ErhI	CCWWGG	1 cut(s)	630
FaeI	CATG	5 cut(s)	272, 288, 385, 615, 1166
FalI	AAGNNNNNCTT	2 cut(s)	87, 119
FaqI	GGGAC	1 cut(s)	1419
FatI	CATG	5 cut(s)	268, 284, 381, 611, 1162
FauNDI	CATATG	1 cut(s)	532
FbaI	TGATCA	2 cut(s)	604, 997
FblI	GTMKAC	1 cut(s)	393
Fnu4HI	GCNGC	8 cut(s)	72, 417, 485, 538, 747, 855, 900, 903
FokI	GGATG	7 cut(s)	289, 686, 755, 772, 1177, 1537, 1543
Fsp4HI	GCNGC	8 cut(s)	72, 417, 485, 538, 747, 855, 900, 903
FspBI	CTAG	1 cut(s)	959
GlaI	GCGC	1 cut(s)	555
GluI	GCNGC	8 cut(s)	72, 417, 485, 538, 747, 855, 900, 903
GsuI	CTGGAG	5 cut(s)	235, 565, 771, 1023, 1128
HaeII	RGCGCY	1 cut(s)	557
HaeIII	GGCC	4 cut(s)	8, 220, 255, 1257
HgaI	GACGC	1 cut(s)	186
HhaI	GCGC	1 cut(s)	556
Hin1I	GRCGYC	2 cut(s)	178, 554
Hin1II	CATG	5 cut(s)	272, 288, 385, 615, 1166
Hin6I	GCGC	1 cut(s)	554
HinP1I	GCGC	1 cut(s)	554
HincII	GTYRAC	1 cut(s)	1386
HindII	GTYRAC	1 cut(s)	1386
HindIII	AAGCTT	1 cut(s)	159
HinfI	GANTC	8 cut(s)	352, 422, 597, 1145, 1166, 1178, 1474, 1568
HpaI	GTTAAC	1 cut(s)	1386
HphI	GGTGA	2 cut(s)	35, 968
Hpy166II	GTNNAC	2 cut(s)	394, 1386
Hpy188I	TCNGA	5 cut(s)	139, 240, 335, 364, 1284
Hpy188III	TCNNGA	6 cut(s)	408, 959, 1049, 1197, 1248, 1478
Hpy8I	GTNNAC	2 cut(s)	394, 1386
HpyAV	CCTTC	2 cut(s)	614, 1593
HpyCH4III	ACNGT	6 cut(s)	31, 496, 528, 544, 1390, 1426
HpyCH4IV	ACGT	3 cut(s)	79, 396, 697
HpyCH4V	TGCA	9 cut(s)	24, 302, 419, 668, 722, 758, 928, 1097, 1300
HpyF10VI	GCNNNNNNNGC	9 cut(s)	200, 226, 484, 560, 674, 728, 755, 962, 1524
HpyF3I	CTNAG	9 cut(s)	230, 375, 426, 714, 980, 1157, 1281, 1320, 1560
HpySE526I	ACGT	3 cut(s)	79, 396, 697
Hsp92I	GRCGYC	2 cut(s)	178, 554
Hsp92II	CATG	5 cut(s)	272, 288, 385, 615, 1166
HspAI	GCGC	1 cut(s)	554
KasI	GGCGCC	1 cut(s)	553
Ksp22I	TGATCA	2 cut(s)	604, 997
KspAI	GTTAAC	1 cut(s)	1386
Kzo9I	GATC	6 cut(s)	410, 604, 821, 997, 1063, 1504
LguI	GCTCTTC	1 cut(s)	61
LmnI	GCTCC	6 cut(s)	584, 643, 658, 1042, 1273, 1376
Lsp1109I	GCAGC	6 cut(s)	58, 403, 496, 733, 841, 886
LweI	GCATC	4 cut(s)	3, 311, 664, 794
MaeI	CTAG	1 cut(s)	959
MaeII	ACGT	3 cut(s)	79, 396, 697
MaeIII	GTNAC	4 cut(s)	31, 401, 584, 1276
MalI	GATC	6 cut(s)	412, 606, 823, 999, 1065, 1506
MboI	GATC	6 cut(s)	410, 604, 821, 997, 1063, 1504
MboII	GAAGA	9 cut(s)	75, 78, 449, 893, 1001, 1224, 1236, 1352, 1581
MfeI	CAATTG	1 cut(s)	1172
MflI	RGATCY	1 cut(s)	1063
MhlI	GDGCHC	3 cut(s)	362, 951, 1270
MluCI	AATT	9 cut(s)	245, 802, 807, 1120, 1172, 1302, 1355, 1419, 1509
Mly113I	GGCGCC	1 cut(s)	554
MlyI	GAGTC	1 cut(s)	1175
MmeI	TCCRAC	2 cut(s)	62, 330
MroXI	GAANNNNTTC	1 cut(s)	885
MseI	TTAA	7 cut(s)	186, 801, 806, 827, 941, 1385, 1609
MspA1I	CMGCKG	2 cut(s)	854, 905
MspR9I	CCNGG	2 cut(s)	1069, 1263
MunI	CAATTG	1 cut(s)	1172
Mva1269I	GAATGC	2 cut(s)	231, 758
MvaI	CCWGG	2 cut(s)	1069, 1263
MwoI	GCNNNNNNNGC	9 cut(s)	200, 226, 484, 560, 674, 728, 755, 962, 1524
NarI	GGCGCC	1 cut(s)	554
NdeI	CATATG	1 cut(s)	532
NdeII	GATC	6 cut(s)	410, 604, 821, 997, 1063, 1504
NlaIII	CATG	5 cut(s)	272, 288, 385, 615, 1166
NlaIV	GGNNCC	7 cut(s)	555, 580, 645, 654, 888, 1378, 1441
NmeAIII	GCCGAG	1 cut(s)	246
NmuCI	GTSAC	1 cut(s)	401
NspV	TTCGAA	1 cut(s)	262
PasI	CCCWGGG	1 cut(s)	1068
PciSI	GCTCTTC	1 cut(s)	61
PctI	GAATGC	2 cut(s)	231, 758
PdmI	GAANNNNTTC	1 cut(s)	885
PfeI	GAWTC	7 cut(s)	352, 422, 597, 1145, 1178, 1474, 1568
PflMI	CCANNNNNTGG	1 cut(s)	1196
PkrI	GCNGC	8 cut(s)	73, 418, 486, 539, 748, 856, 901, 904
PleI	GAGTC	1 cut(s)	1174
PluTI	GGCGCC	1 cut(s)	557
PpsI	GAGTC	1 cut(s)	1174
PshBI	ATTAAT	3 cut(s)	186, 801, 827
Psp6I	CCWGG	2 cut(s)	1067, 1261
PspGI	CCWGG	2 cut(s)	1067, 1261
PspN4I	GGNNCC	7 cut(s)	555, 580, 645, 654, 888, 1378, 1441
PspPI	GGNCC	1 cut(s)	253
PstI	CTGCAG	1 cut(s)	421
PsuI	RGATCY	1 cut(s)	1063
RsaI	GTAC	3 cut(s)	283, 850, 1392
RsaNI	GTAC	3 cut(s)	282, 849, 1391
SapI	GCTCTTC	1 cut(s)	61
SaqAI	TTAA	7 cut(s)	186, 801, 806, 827, 941, 1385, 1609
SatI	GCNGC	8 cut(s)	72, 417, 485, 538, 747, 855, 900, 903
Sau3AI	GATC	6 cut(s)	410, 604, 821, 997, 1063, 1504
Sau96I	GGNCC	1 cut(s)	253
SchI	GAGTC	1 cut(s)	1175
ScrFI	CCNGG	2 cut(s)	1069, 1263
SduI	GDGCHC	3 cut(s)	362, 951, 1270
SfaNI	GCATC	4 cut(s)	3, 311, 664, 794
SfcI	CTRYAG	1 cut(s)	417
SfoI	GGCGCC	1 cut(s)	555
SfuI	TTCGAA	1 cut(s)	262
SmlI	CTYRAG	1 cut(s)	1047
SmoI	CTYRAG	1 cut(s)	1047
Sse9I	AATT	9 cut(s)	245, 802, 807, 1120, 1172, 1302, 1355, 1419, 1509
SsiI	CCGC	4 cut(s)	537, 641, 852, 903
SspDI	GGCGCC	1 cut(s)	553
SspMI	CTAG	1 cut(s)	959
StyD4I	CCNGG	2 cut(s)	1067, 1261
StyI	CCWWGG	1 cut(s)	630
TaaI	ACNGT	6 cut(s)	31, 496, 528, 544, 1390, 1426
TaiI	ACGT	3 cut(s)	82, 399, 700
TaqI	TCGA	1 cut(s)	262
TasI	AATT	9 cut(s)	245, 802, 807, 1120, 1172, 1302, 1355, 1419, 1509
TatI	WGTACW	2 cut(s)	281, 1390
TauI	GCSGC	2 cut(s)	540, 905
TfiI	GAWTC	7 cut(s)	352, 422, 597, 1145, 1178, 1474, 1568
Tru1I	TTAA	7 cut(s)	186, 801, 806, 827, 941, 1385, 1609
Tru9I	TTAA	7 cut(s)	186, 801, 806, 827, 941, 1385, 1609
TscAI	CASTG	2 cut(s)	1039, 1431
TseFI	GTSAC	1 cut(s)	401
TseI	GCWGC	6 cut(s)	71, 416, 484, 746, 854, 899
Tsp45I	GTSAC	1 cut(s)	401
TspDTI	ATGAA	5 cut(s)	141, 257, 449, 1079, 1431
TspGWI	ACGGA	1 cut(s)	761
TspRI	CASTG	2 cut(s)	1039, 1431
Van91I	CCANNNNNTGG	1 cut(s)	1196
VspI	ATTAAT	3 cut(s)	186, 801, 827
XagI	CCTNNNNNAGG	1 cut(s)	1525
XapI	RAATTY	4 cut(s)	245, 1302, 1355, 1509
XbaI	TCTAGA	1 cut(s)	958
XcmI	CCANNNNNNNNNTGG	1 cut(s)	775
XmiI	GTMKAC	1 cut(s)	393
XmnI	GAANNNNTTC	1 cut(s)	885
XspI	CTAG	1 cut(s)	959

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.