Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0002603

Physical Location & Seq

Genomic Coordinates Reverse (-)

15827216 .. 15831475

Gene Structure 4260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG092200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGGCCACCGCCCAACCCTCCGAGAACGGCTCCGCCAAGGCTCCGGAACCCGACCCGCGACCCGAACCCGTCACCGAAGCCGCGCCCGACTCCGACCCGTCCACCACTACAATCGATAACAACCAAAATCGGAACCCCGACTCCGAATCCGCTCCTTCCGAGGCTCCGGCGATGACTTCCAGCAGCGATGCCGTGTCCGCCGCCGATAAAAGATGGCCGGGGTGGCCCGGCGACTGTGTTTTCCGGCTGATTGTGCCGGTTCTTAAGGTCGGGAGCATTATCGGCCGGAAAGGCGAGCTCATTAAGAAGATGTGTGAGGAGACAAGAGCTCGCATTCGCGTCCTTGACGGCGCCGCAGGGACTACTGATCGCATCGTGCTGATCTCCGGAAGGGAAGAGCCAGAGGCTCCTCTTTCCCCTGCAATGGATGCTGTAATAAGAGTATTCAAACGTGTCGCTGGATTATCTGAGAGTGCAGGCGAGGCAGAGTTGTCTGGTGCTGCTGGAGTTGCATTCTGTTCCATCCGTTTGTTGGTAGCATCCACACAAGCGATTAATTTAATTGGAAAACAAGGATCATTAATCAAATCTATACAGGAGAGTACCGCTGCTTCTGTGCGAGTATTGTCTGGAGAAGAGGTTCCATTCTATGCTGCCGCTGATGAGAGGATTATTGAAATGCAGGGAGAAACCTTAAAGGTGCTCAAAGCTCTAGAAGCAGTAGTGTCTCACCTGAGGAAGTTTTTGGTCGATCATAGTGTTCTTCCTCTTTTTGAGAAAACTTACACTGCTCCAGTTTCTCAAGAACGCCAACCAGATCCCTGGGCTGACAAGTCGTTGCTTCATACTGCAACTCAAACTGGAGGTGGCACTAATTATCCTCTCACAGCTACGCGGGAATCTTTGTTTCTCAGCCGTGAGACGCAATTGGAATCACAACTCCCATCCTCTGGACTTTCCATTTATGGACAAGAGGCTTCTCTTTCTTCAATACGTTCTTCAGGACTTGGCCGTCCTGGTGCTCCTATTGTTACTCAGATTACGCAAACAATGCAAATTCCTCTGTCTTATGCTGAGGACATTATTGGAGTTGAAGGAAGGAGTATTGAATTTATTCGTCGTAGTAGTGGAGCCTTGTTAACTGTACAAGAGAGCAGGGGACTACCTGATGAAATTACAGTGGAAATAAAAGGCACCTCATCACAGGTTCAGGCGGCTCAACAACTGATTCAGGAAGTTATAGCAACCAGCAACAAGGATCAAATTCCAAGCAGCTATGGCAGGATGGATACCGGATTGAGGTCATCCTACTCTCAGTTAGATTCTATATCTTACCCTTCCTCTTCAGTATCCTCGCTACCTTATGATGCGTATGGAAATTCAATACCATCACAACAACCTTATGGATCTTCCGGTCTAGGAGGAGGCTACAGCACGTTCCGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0022414 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048367 GO:0048438 GO:0048467 GO:0048519 GO:0048577 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048587 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0090567 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:2000026 GO:2000028 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

482

Amino Acids

51.29

Weight (kDa)

5.03

Isoelectric Point (pI)

49.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	81 - 133	1.1e-12	KH domain
KH_1	PF00013	175 - 241	2.8e-10	KH domain
KH_1	PF00013	348 - 412	3.8e-11	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26000
fragaria_vesca	FvH4_4g07200
malus_domestica	MD13G1239500.v1.1 MD16G1248300.v1.1
prunus_persica	Prupe.1G074800_v2.0.a1
pyrus_communis	pycom16g20810
rosa_chinensis	RchiOBHm_Chr1g0313971 RchiOBHm_Chr2g0148541 RchiOBHm_Chr4g0399461 RchiOBHm_Chr5g0014711 RchiOBHm_Chr6g0261341
rosa_laevigata	RLG00000009266 RLG00000030564 RLG00000030569
rosa_multiflora	Rmu_sc0002255.1_g000002 Rmu_sc0002285.1_g000008 Rmu_sc0039997.1_g000001
rosa_roxburghii	Rroxscaffold_5G00344350
rosa_rugosa	Rorug04G0017100
rosa_samantha	Rh1AG125900 Rh1BG084500 Rh1CG119800 Rh2BG479200 Rh2CG224100 Rh2CG303100 Rh2DG228200 Rh2DG339000 Rh2DG488100 Rh4AG094900 Rh4BG092200 Rh4CG103100 Rh4DG087100 Rh4DG115200 Rh5BG489900 Rh5CG124300 Rh5CG332000 Rh5CG513700 Rh6CG106600
rosa_wichuraiana	Rw1G021120 Rw4G007800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1011
AccB1I	GGYRCC	2 cut(s)	350, 1193
AccB7I	CCANNNNNTGG	1 cut(s)	950
AccBSI	CCGCTC	1 cut(s)	152
AccII	CGCG	4 cut(s)	58, 83, 339, 895
AccIII	TCCGGA	2 cut(s)	43, 386
AclWI	GGATC	4 cut(s)	583, 812, 1266, 1414
AcoI	YGGCCR	4 cut(s)	3, 215, 283, 1009
AcsI	RAATTY	4 cut(s)	1056, 1109, 1263, 1378
AcuI	CTGAAG	2 cut(s)	984, 1329
AcyI	GRCGYC	1 cut(s)	351
AfaI	GTAC	2 cut(s)	604, 1146
AfiI	CCNNNNNNNGG	4 cut(s)	424, 532, 950, 1299
AflII	CTTAAG	1 cut(s)	263
AflIII	ACRYGT	1 cut(s)	451
AgsI	TTSAA	6 cut(s)	448, 677, 990, 1094, 1109, 1383
AjnI	CCWGG	2 cut(s)	821, 1015
AloI	GAACNNNNNNTCC	4 cut(s)	125, 157, 624, 656
AluBI	AGCT	5 cut(s)	298, 329, 710, 890, 1275
AluI	AGCT	5 cut(s)	298, 329, 710, 890, 1275
Alw21I	GWGCWC	4 cut(s)	300, 331, 705, 1024
Alw26I	GTCTC	3 cut(s)	314, 732, 914
AlwI	GGATC	4 cut(s)	583, 812, 1266, 1414
Aor13HI	TCCGGA	2 cut(s)	43, 386
AoxI	GGCC	5 cut(s)	3, 215, 224, 283, 1009
ApeKI	GCWGC	5 cut(s)	183, 500, 608, 653, 1272
ApoI	RAATTY	4 cut(s)	1056, 1109, 1263, 1378
AseI	ATTAAT	2 cut(s)	555, 581
Asp700I	GAANNNNTTC	2 cut(s)	639, 1113
AspLEI	GCGC	2 cut(s)	85, 353
AspS9I	GGNCC	1 cut(s)	225
AsuC2I	CCSGG	2 cut(s)	219, 228
AsuHPI	GGTGA	2 cut(s)	64, 722
AxyI	CCTNAGG	1 cut(s)	734
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	350, 1193
BanII	GRGCYC	2 cut(s)	300, 331
BarI	GAAGNNNNNNTAC	2 cut(s)	595, 627
Bbv12I	GWGCWC	4 cut(s)	300, 331, 705, 1024
BbvCI	CCTCAGC	1 cut(s)	1074
BbvI	GCAGC	5 cut(s)	195, 487, 595, 640, 1284
BccI	CCATC	5 cut(s)	207, 530, 952, 1279, 1396
BceAI	ACGGC	5 cut(s)	43, 176, 364, 900, 996
BciT130I	CCWGG	2 cut(s)	823, 1017
BciVI	GTATCC	2 cut(s)	1282, 1360
BcnI	CCSGG	2 cut(s)	219, 228
BcoDI	GTCTC	3 cut(s)	314, 732, 914
BfaI	CTAG	2 cut(s)	713, 1418
BfmI	CTRYAG	1 cut(s)	1429
BfoI	RGCGCY	1 cut(s)	354
BfrI	CTTAAG	1 cut(s)	263
BfuI	GTATCC	2 cut(s)	1282, 1360
BglI	GCCNNNNNGGC	2 cut(s)	223, 291
Bme1390I	CCNGG	4 cut(s)	219, 228, 823, 1017
BmgT120I	GGNCC	1 cut(s)	225
BmrFI	CCNGG	4 cut(s)	219, 228, 823, 1017
BmsI	GCATC	5 cut(s)	178, 381, 418, 548, 1357
BplI	GAGNNNNNCTC	2 cut(s)	14, 46
BpmI	CTGGAG	4 cut(s)	525, 651, 777, 882
Bpu10I	CCTNAGC	1 cut(s)	1074
BpuEI	CTTGAG	1 cut(s)	786
BpuMI	CCSGG	2 cut(s)	219, 228
Bsa29I	ATCGAT	1 cut(s)	114
BsaHI	GRCGYC	1 cut(s)	351
BsaJI	CCNNGG	5 cut(s)	36, 159, 218, 821, 822
BsaWI	WCCGGW	4 cut(s)	43, 386, 1292, 1412
BsaXI	ACNNNNNCTCC	4 cut(s)	125, 155, 624, 654
Bsc4I	CCNNNNNNNGG	4 cut(s)	424, 532, 950, 1299
Bse118I	RCCGGY	1 cut(s)	256
Bse1I	ACTGG	2 cut(s)	794, 865
Bse21I	CCTNAGG	1 cut(s)	734
Bse3DI	GCAATG	1 cut(s)	429
BseAI	TCCGGA	2 cut(s)	43, 386
BseBI	CCWGG	2 cut(s)	823, 1017
BseCI	ATCGAT	1 cut(s)	114
BseDI	CCNNGG	5 cut(s)	36, 159, 218, 821, 822
BseGI	GGATG	6 cut(s)	433, 522, 539, 944, 1290, 1304
BseLI	CCNNNNNNNGG	4 cut(s)	424, 532, 950, 1299
BseMI	GCAATG	1 cut(s)	429
BseMII	CTCAG	6 cut(s)	459, 725, 925, 1049, 1065, 1328
BseNI	ACTGG	2 cut(s)	794, 865
BseRI	GAGGAG	3 cut(s)	332, 399, 1437
BseX3I	CGGCCG	1 cut(s)	283
BseXI	GCAGC	5 cut(s)	195, 487, 595, 640, 1284
BsgI	GTGCAG	1 cut(s)	495
Bsh1236I	CGCG	4 cut(s)	58, 83, 339, 895
Bsh1285I	CGRYCG	1 cut(s)	286
BshFI	GGCC	5 cut(s)	5, 217, 226, 285, 1011
BshNI	GGYRCC	2 cut(s)	350, 1193
BshVI	ATCGAT	1 cut(s)	114
BsiEI	CGRYCG	1 cut(s)	286
BsiHKAI	GWGCWC	4 cut(s)	300, 331, 705, 1024
BslFI	GGGAC	2 cut(s)	373, 1173
BslI	CCNNNNNNNGG	4 cut(s)	424, 532, 950, 1299
BsmAI	GTCTC	3 cut(s)	314, 732, 914
BsmBI	CGTCTC	1 cut(s)	914
BsmFI	GGGAC	2 cut(s)	373, 1173
BsmI	GAATGC	2 cut(s)	333, 512
BsnI	GGCC	5 cut(s)	5, 217, 226, 285, 1011
Bsp1286I	GDGCHC	4 cut(s)	300, 331, 705, 1024
Bsp13I	TCCGGA	2 cut(s)	43, 386
Bsp1407I	TGTACA	1 cut(s)	1144
Bsp143I	GATC	7 cut(s)	367, 381, 575, 751, 817, 1258, 1406
BspANI	GGCC	5 cut(s)	5, 217, 226, 285, 1011
BspCNI	CTCAG	6 cut(s)	460, 726, 924, 1048, 1066, 1327
BspDI	ATCGAT	1 cut(s)	114
BspEI	TCCGGA	2 cut(s)	43, 386
BspFNI	CGCG	4 cut(s)	58, 83, 339, 895
BspPI	GGATC	4 cut(s)	583, 812, 1266, 1414
BspQI	GCTCTTC	1 cut(s)	390
BspT107I	GGYRCC	2 cut(s)	350, 1193
BspTI	CTTAAG	1 cut(s)	263
BsrBI	CCGCTC	1 cut(s)	152
BsrDI	GCAATG	1 cut(s)	429
BsrFI	RCCGGY	1 cut(s)	256
BsrGI	TGTACA	1 cut(s)	1144
BsrI	ACTGG	2 cut(s)	794, 865
BssAI	RCCGGY	1 cut(s)	256
BssECI	CCNNGG	5 cut(s)	36, 159, 218, 821, 822
BssMI	GATC	7 cut(s)	367, 381, 575, 751, 817, 1258, 1406
BssNI	GRCGYC	1 cut(s)	351
BssT1I	CCWWGG	1 cut(s)	36
Bst2UI	CCWGG	2 cut(s)	823, 1017
Bst4CI	ACNGT	3 cut(s)	236, 1144, 1180
Bst6I	CTCTTC	3 cut(s)	390, 630, 1348
BstACI	GRCGYC	1 cut(s)	351
BstAFI	CTTAAG	1 cut(s)	263
BstAPI	GCANNNNNTGC	2 cut(s)	428, 1051
BstAUI	TGTACA	1 cut(s)	1144
BstC8I	GCNNGC	3 cut(s)	296, 331, 478
BstDEI	CTNAG	6 cut(s)	468, 734, 911, 1035, 1074, 1314
BstF5I	GGATG	6 cut(s)	433, 522, 539, 944, 1290, 1304
BstFNI	CGCG	4 cut(s)	58, 83, 339, 895
BstH2I	RGCGCY	1 cut(s)	354
BstHHI	GCGC	2 cut(s)	85, 353
BstKTI	GATC	7 cut(s)	370, 384, 578, 754, 820, 1261, 1409
BstMAI	GTCTC	3 cut(s)	314, 732, 914
BstMBI	GATC	7 cut(s)	367, 381, 575, 751, 817, 1258, 1406
BstMCI	CGRYCG	1 cut(s)	286
BstNI	CCWGG	2 cut(s)	823, 1017
BstSCI	CCNGG	4 cut(s)	217, 226, 821, 1015
BstSFI	CTRYAG	1 cut(s)	1429
BstUI	CGCG	4 cut(s)	58, 83, 339, 895
BstV1I	GCAGC	5 cut(s)	195, 487, 595, 640, 1284
BstX2I	RGATCY	2 cut(s)	817, 1406
BstXI	CCANNNNNNTGG	1 cut(s)	822
BstYI	RGATCY	2 cut(s)	817, 1406
BstZI	CGGCCG	1 cut(s)	283
Bsu15I	ATCGAT	1 cut(s)	114
Bsu36I	CCTNAGG	1 cut(s)	734
BsuI	GTATCC	2 cut(s)	1282, 1360
BsuRI	GGCC	5 cut(s)	5, 217, 226, 285, 1011
BsuTUI	ATCGAT	1 cut(s)	114
BtgZI	GCGATG	2 cut(s)	185, 201
BtsCI	GGATG	6 cut(s)	433, 522, 539, 944, 1290, 1304
BtsI	GCAGTG	1 cut(s)	786
BtsIMutI	CAGTG	2 cut(s)	786, 1185
Cac8I	GCNNGC	3 cut(s)	296, 331, 478
CfoI	GCGC	2 cut(s)	85, 353
Cfr10I	RCCGGY	1 cut(s)	256
Cfr13I	GGNCC	1 cut(s)	225
ClaI	ATCGAT	1 cut(s)	114
CseI	GACGC	2 cut(s)	328, 931
Csp6I	GTAC	2 cut(s)	603, 1145
CviQI	GTAC	2 cut(s)	603, 1145
DdeI	CTNAG	6 cut(s)	468, 734, 911, 1035, 1074, 1314
DinI	GGCGCC	1 cut(s)	352
DpnI	GATC	7 cut(s)	369, 383, 577, 753, 819, 1260, 1408
DpnII	GATC	7 cut(s)	367, 381, 575, 751, 817, 1258, 1406
DrdI	GACNNNNNNGTC	1 cut(s)	1011
DseDI	GACNNNNNNGTC	1 cut(s)	1011
EaeI	YGGCCR	4 cut(s)	3, 215, 283, 1009
EagI	CGGCCG	1 cut(s)	283
Eam1104I	CTCTTC	3 cut(s)	390, 630, 1348
EarI	CTCTTC	3 cut(s)	390, 630, 1348
EciI	GGCGGA	2 cut(s)	22, 187
Ecl136II	GAGCTC	2 cut(s)	298, 329
EclXI	CGGCCG	1 cut(s)	283
Eco130I	CCWWGG	1 cut(s)	36
Eco24I	GRGCYC	2 cut(s)	300, 331
Eco52I	CGGCCG	1 cut(s)	283
Eco53kI	GAGCTC	2 cut(s)	298, 329
Eco57I	CTGAAG	2 cut(s)	984, 1329
Eco81I	CCTNAGG	1 cut(s)	734
EcoICRI	GAGCTC	2 cut(s)	298, 329
EcoRII	CCWGG	2 cut(s)	821, 1015
EcoT14I	CCWWGG	1 cut(s)	36
EcoT38I	GRGCYC	2 cut(s)	300, 331
EgeI	GGCGCC	1 cut(s)	352
EheI	GGCGCC	1 cut(s)	352
ErhI	CCWWGG	1 cut(s)	36
Esp3I	CGTCTC	1 cut(s)	914
FaqI	GGGAC	2 cut(s)	373, 1173
FauI	CCCGC	2 cut(s)	63, 888
FokI	GGATG	6 cut(s)	440, 509, 526, 931, 1291, 1297
FriOI	GRGCYC	2 cut(s)	300, 331
FspBI	CTAG	2 cut(s)	713, 1418
GlaI	GCGC	2 cut(s)	84, 352
GsuI	CTGGAG	4 cut(s)	525, 651, 777, 882
HaeII	RGCGCY	1 cut(s)	354
HaeIII	GGCC	5 cut(s)	5, 217, 226, 285, 1011
HgaI	GACGC	2 cut(s)	328, 931
HhaI	GCGC	2 cut(s)	85, 353
Hin1I	GRCGYC	1 cut(s)	351
Hin6I	GCGC	2 cut(s)	83, 351
HinP1I	GCGC	2 cut(s)	83, 351
HincII	GTYRAC	1 cut(s)	1140
HindII	GTYRAC	1 cut(s)	1140
HinfI	GANTC	7 cut(s)	89, 140, 146, 899, 932, 1228, 1322
HpaI	GTTAAC	1 cut(s)	1140
HphI	GGTGA	2 cut(s)	64, 722
Hpy166II	GTNNAC	2 cut(s)	102, 1140
Hpy188I	TCNGA	7 cut(s)	22, 94, 132, 145, 160, 469, 1038
Hpy188III	TCNNGA	9 cut(s)	44, 271, 387, 630, 713, 803, 951, 1002, 1232
Hpy8I	GTNNAC	2 cut(s)	102, 1140
Hpy99I	CGWCG	1 cut(s)	1122
HpyAV	CCTTC	5 cut(s)	165, 384, 1088, 1092, 1347
HpyCH4III	ACNGT	3 cut(s)	236, 1144, 1180
HpyCH4IV	ACGT	3 cut(s)	451, 994, 1436
HpyCH4V	TGCA	6 cut(s)	422, 476, 512, 682, 851, 1054
HpyF3I	CTNAG	6 cut(s)	468, 734, 911, 1035, 1074, 1314
HpySE526I	ACGT	3 cut(s)	451, 994, 1436
Hsp92I	GRCGYC	1 cut(s)	351
HspAI	GCGC	2 cut(s)	83, 351
KasI	GGCGCC	1 cut(s)	350
Kpn2I	TCCGGA	2 cut(s)	43, 386
KspAI	GTTAAC	1 cut(s)	1140
Kzo9I	GATC	7 cut(s)	367, 381, 575, 751, 817, 1258, 1406
LguI	GCTCTTC	1 cut(s)	390
LmnI	GCTCC	9 cut(s)	35, 46, 157, 169, 273, 412, 796, 1027, 1130
Lsp1109I	GCAGC	5 cut(s)	195, 487, 595, 640, 1284
LweI	GCATC	5 cut(s)	178, 381, 418, 548, 1357
MaeI	CTAG	2 cut(s)	713, 1418
MaeII	ACGT	3 cut(s)	451, 994, 1436
MaeIII	GTNAC	2 cut(s)	70, 1030
MalI	GATC	7 cut(s)	369, 383, 577, 753, 819, 1260, 1408
MbiI	CCGCTC	1 cut(s)	152
MboI	GATC	7 cut(s)	367, 381, 575, 751, 817, 1258, 1406
MboII	GAAGA	8 cut(s)	319, 407, 647, 755, 978, 990, 1335, 1401
MfeI	CAATTG	1 cut(s)	926
MflI	RGATCY	2 cut(s)	817, 1406
MhlI	GDGCHC	4 cut(s)	300, 331, 705, 1024
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	556, 561, 874, 926, 1056, 1109, 1173, 1263, 1378
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	351
MlyI	GAGTC	2 cut(s)	83, 134
MmeI	TCCRAC	1 cut(s)	117
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	2 cut(s)	43, 386
MroXI	GAANNNNTTC	2 cut(s)	639, 1113
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	264, 303, 555, 560, 581, 695, 1139
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	608, 659
MspCI	CTTAAG	1 cut(s)	263
MspR9I	CCNGG	4 cut(s)	219, 228, 823, 1017
MunI	CAATTG	1 cut(s)	926
Mva1269I	GAATGC	2 cut(s)	333, 512
MvaI	CCWGG	2 cut(s)	823, 1017
MvnI	CGCG	4 cut(s)	58, 83, 339, 895
NarI	GGCGCC	1 cut(s)	351
NciI	CCSGG	2 cut(s)	219, 228
NdeII	GATC	7 cut(s)	367, 381, 575, 751, 817, 1258, 1406
NmuCI	GTSAC	1 cut(s)	70
PasI	CCCWGGG	1 cut(s)	822
PciSI	GCTCTTC	1 cut(s)	390
PctI	GAATGC	2 cut(s)	333, 512
PdmI	GAANNNNTTC	2 cut(s)	639, 1113
PfeI	GAWTC	5 cut(s)	146, 899, 932, 1228, 1322
PflMI	CCANNNNNTGG	1 cut(s)	950
PleI	GAGTC	2 cut(s)	83, 134
PluTI	GGCGCC	1 cut(s)	354
PpsI	GAGTC	2 cut(s)	83, 134
PshBI	ATTAAT	2 cut(s)	555, 581
Psp124BI	GAGCTC	2 cut(s)	300, 331
Psp6I	CCWGG	2 cut(s)	821, 1015
PspGI	CCWGG	2 cut(s)	821, 1015
PspPI	GGNCC	1 cut(s)	225
PsuI	RGATCY	2 cut(s)	817, 1406
RsaI	GTAC	2 cut(s)	604, 1146
RsaNI	GTAC	2 cut(s)	603, 1145
SacI	GAGCTC	2 cut(s)	300, 331
SapI	GCTCTTC	1 cut(s)	390
SaqAI	TTAA	7 cut(s)	264, 303, 555, 560, 581, 695, 1139
Sau3AI	GATC	7 cut(s)	367, 381, 575, 751, 817, 1258, 1406
Sau96I	GGNCC	1 cut(s)	225
SchI	GAGTC	2 cut(s)	83, 134
ScrFI	CCNGG	4 cut(s)	219, 228, 823, 1017
SduI	GDGCHC	4 cut(s)	300, 331, 705, 1024
SfaNI	GCATC	5 cut(s)	178, 381, 418, 548, 1357
SfcI	CTRYAG	1 cut(s)	1429
SfiI	GGCCNNNNNGGCC	1 cut(s)	223
SfoI	GGCGCC	1 cut(s)	352
SmlI	CTYRAG	2 cut(s)	263, 801
SmoI	CTYRAG	2 cut(s)	263, 801
Sse9I	AATT	9 cut(s)	556, 561, 874, 926, 1056, 1109, 1173, 1263, 1378
SspDI	GGCGCC	1 cut(s)	350
SspMI	CTAG	2 cut(s)	713, 1418
SstI	GAGCTC	2 cut(s)	300, 331
StyD4I	CCNGG	4 cut(s)	217, 226, 821, 1015
StyI	CCWWGG	1 cut(s)	36
TaaI	ACNGT	3 cut(s)	236, 1144, 1180
TaiI	ACGT	3 cut(s)	454, 997, 1439
TaqI	TCGA	2 cut(s)	114, 750
TasI	AATT	9 cut(s)	556, 561, 874, 926, 1056, 1109, 1173, 1263, 1378
TatI	WGTACW	1 cut(s)	1144
TauI	GCSGC	5 cut(s)	83, 203, 356, 659, 1217
TfiI	GAWTC	5 cut(s)	146, 899, 932, 1228, 1322
Tru1I	TTAA	7 cut(s)	264, 303, 555, 560, 581, 695, 1139
Tru9I	TTAA	7 cut(s)	264, 303, 555, 560, 581, 695, 1139
TscAI	CASTG	2 cut(s)	793, 1185
TseFI	GTSAC	1 cut(s)	70
TseI	GCWGC	5 cut(s)	183, 500, 608, 653, 1272
Tsp45I	GTSAC	1 cut(s)	70
TspDTI	ATGAA	2 cut(s)	833, 1185
TspGWI	ACGGA	1 cut(s)	515
TspRI	CASTG	2 cut(s)	793, 1185
Van91I	CCANNNNNTGG	1 cut(s)	950
Vha464I	CTTAAG	1 cut(s)	263
VspI	ATTAAT	2 cut(s)	555, 581
XapI	RAATTY	4 cut(s)	1056, 1109, 1263, 1378
XbaI	TCTAGA	1 cut(s)	712
XcmI	CCANNNNNNNNNTGG	1 cut(s)	529
XmnI	GAANNNNTTC	2 cut(s)	639, 1113
XspI	CTAG	2 cut(s)	713, 1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.