Protein pleiotropic regulatory locus
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16650 AT4G15900 |
| fragaria_vesca | FvH4_4g18400 FvH4_4g23450 |
| malus_domestica | MD00G1128100.v1.1 MD00G1184900.v1.1 MD05G1262800.v1.1 MD16G1081900.v1.1 MD16G1167100.v1.1 |
| prunus_persica | Prupe.1G134100_v2.0.a1 Prupe.1G134100_v2.0.a1 Prupe.6G318200_v2.0.a1 |
| pyrus_communis | pycom06g06670 pycom13g14280 pycom16g14110 |
| rosa_chinensis | RchiOBHm_Chr4g0422851 RchiOBHm_Chr4g0429811 RchiOBHm_Chr4g0429821 |
| rosa_laevigata | RLG00000007041 RLG00000007600 |
| rosa_multiflora | Rmu_co8144486.1_g000001 Rmu_co8520863.1_g000001 Rmu_sc0000830.1_g000042 Rmu_sc0006762.1_g000001 Rmu_sc0021868.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00364710 Rroxscaffold_5G00371580 |
| rosa_rugosa | Rorug04G0181800 Rorug04G0238500 |
| rosa_samantha | Rh4AG242200 Rh4BG245800 Rh4BG300800 Rh4BG300900 Rh4CG256100 Rh4DG240800 Rh4DG297900 |
| rosa_wichuraiana | Rw4G020860 Rw4G025490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 279 |
| AciI | CCGC | 1 cut(s) | 5 |
| AcoI | YGGCCR | 2 cut(s) | 27, 76 |
| AfaI | GTAC | 1 cut(s) | 108 |
| AjnI | CCWGG | 1 cut(s) | 112 |
| AluBI | AGCT | 1 cut(s) | 134 |
| AluI | AGCT | 1 cut(s) | 134 |
| Alw21I | GWGCWC | 1 cut(s) | 148 |
| AoxI | GGCC | 2 cut(s) | 27, 76 |
| AsuHPI | GGTGA | 1 cut(s) | 26 |
| BalI | TGGCCA | 2 cut(s) | 29, 78 |
| BanI | GGYRCC | 1 cut(s) | 279 |
| Bbv12I | GWGCWC | 1 cut(s) | 148 |
| BccI | CCATC | 1 cut(s) | 11 |
| BciT130I | CCWGG | 1 cut(s) | 114 |
| BfaI | CTAG | 2 cut(s) | 176, 286 |
| Bme1390I | CCNGG | 1 cut(s) | 114 |
| BmiI | GGNNCC | 1 cut(s) | 281 |
| BmrFI | CCNGG | 1 cut(s) | 114 |
| BsaWI | WCCGGW | 1 cut(s) | 32 |
| Bse1I | ACTGG | 1 cut(s) | 169 |
| BseBI | CCWGG | 1 cut(s) | 114 |
| BseGI | GGATG | 1 cut(s) | 244 |
| BseNI | ACTGG | 1 cut(s) | 169 |
| BshFI | GGCC | 2 cut(s) | 29, 78 |
| BshNI | GGYRCC | 1 cut(s) | 279 |
| BsiHKAI | GWGCWC | 1 cut(s) | 148 |
| BsiSI | CCGG | 3 cut(s) | 33, 263, 277 |
| BsnI | GGCC | 2 cut(s) | 29, 78 |
| Bsp1286I | GDGCHC | 1 cut(s) | 148 |
| Bsp1407I | TGTACA | 1 cut(s) | 106 |
| Bsp143I | GATC | 1 cut(s) | 201 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 2 cut(s) | 29, 78 |
| BspLI | GGNNCC | 1 cut(s) | 281 |
| BspT107I | GGYRCC | 1 cut(s) | 279 |
| BsrGI | TGTACA | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 169 |
| BssMI | GATC | 1 cut(s) | 201 |
| Bst2UI | CCWGG | 1 cut(s) | 114 |
| Bst4CI | ACNGT | 2 cut(s) | 44, 106 |
| BstAUI | TGTACA | 1 cut(s) | 106 |
| BstF5I | GGATG | 1 cut(s) | 244 |
| BstKTI | GATC | 1 cut(s) | 204 |
| BstMBI | GATC | 1 cut(s) | 201 |
| BstNI | CCWGG | 1 cut(s) | 114 |
| BstSCI | CCNGG | 1 cut(s) | 112 |
| BsuRI | GGCC | 2 cut(s) | 29, 78 |
| BtsCI | GGATG | 1 cut(s) | 244 |
| BtsIMutI | CAGTG | 3 cut(s) | 49, 119, 162 |
| Csp6I | GTAC | 1 cut(s) | 107 |
| CviJI | RGCY | 6 cut(s) | 29, 78, 112, 134, 175, 266 |
| CviKI_1 | RGCY | 6 cut(s) | 29, 78, 112, 134, 175, 266 |
| CviQI | GTAC | 1 cut(s) | 107 |
| DpnI | GATC | 1 cut(s) | 203 |
| DpnII | GATC | 1 cut(s) | 201 |
| EaeI | YGGCCR | 2 cut(s) | 27, 76 |
| Eco32I | GATATC | 1 cut(s) | 274 |
| EcoRII | CCWGG | 1 cut(s) | 112 |
| EcoRV | GATATC | 1 cut(s) | 274 |
| FaiI | YATR | 3 cut(s) | 26, 81, 156 |
| FokI | GGATG | 1 cut(s) | 231 |
| FspBI | CTAG | 2 cut(s) | 176, 286 |
| HaeIII | GGCC | 2 cut(s) | 29, 78 |
| HapII | CCGG | 3 cut(s) | 33, 263, 277 |
| HpaII | CCGG | 3 cut(s) | 33, 263, 277 |
| HphI | GGTGA | 1 cut(s) | 26 |
| Hpy166II | GTNNAC | 2 cut(s) | 119, 193 |
| Hpy8I | GTNNAC | 2 cut(s) | 119, 193 |
| HpyCH4III | ACNGT | 2 cut(s) | 44, 106 |
| Kzo9I | GATC | 1 cut(s) | 201 |
| LpnPI | CCDG | 7 cut(s) | 46, 99, 120, 126, 150, 249, 276 |
| MaeI | CTAG | 2 cut(s) | 176, 286 |
| MaeIII | GTNAC | 2 cut(s) | 160, 178 |
| MalI | GATC | 1 cut(s) | 203 |
| MboI | GATC | 1 cut(s) | 201 |
| MhlI | GDGCHC | 1 cut(s) | 148 |
| MlsI | TGGCCA | 2 cut(s) | 29, 78 |
| MluCI | AATT | 2 cut(s) | 82, 253 |
| MluNI | TGGCCA | 2 cut(s) | 29, 78 |
| MnlI | CCTC | 1 cut(s) | 258 |
| Mox20I | TGGCCA | 2 cut(s) | 29, 78 |
| MscI | TGGCCA | 2 cut(s) | 29, 78 |
| Msp20I | TGGCCA | 2 cut(s) | 29, 78 |
| MspI | CCGG | 3 cut(s) | 33, 263, 277 |
| MspR9I | CCNGG | 1 cut(s) | 114 |
| MvaI | CCWGG | 1 cut(s) | 114 |
| NdeII | GATC | 1 cut(s) | 201 |
| NlaIV | GGNNCC | 1 cut(s) | 281 |
| NmuCI | GTSAC | 1 cut(s) | 160 |
| Psp6I | CCWGG | 1 cut(s) | 112 |
| PspGI | CCWGG | 1 cut(s) | 112 |
| PspN4I | GGNNCC | 1 cut(s) | 281 |
| RsaI | GTAC | 1 cut(s) | 108 |
| RsaNI | GTAC | 1 cut(s) | 107 |
| Sau3AI | GATC | 1 cut(s) | 201 |
| ScrFI | CCNGG | 1 cut(s) | 114 |
| SduI | GDGCHC | 1 cut(s) | 148 |
| SetI | ASST | 3 cut(s) | 118, 136, 285 |
| Sse9I | AATT | 2 cut(s) | 82, 253 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SspMI | CTAG | 2 cut(s) | 176, 286 |
| StyD4I | CCNGG | 1 cut(s) | 112 |
| TaaI | ACNGT | 2 cut(s) | 44, 106 |
| TasI | AATT | 2 cut(s) | 82, 253 |
| TatI | WGTACW | 1 cut(s) | 106 |
| TscAI | CASTG | 3 cut(s) | 49, 126, 169 |
| TseFI | GTSAC | 1 cut(s) | 160 |
| Tsp45I | GTSAC | 1 cut(s) | 160 |
| TspDTI | ATGAA | 1 cut(s) | 237 |
| TspRI | CASTG | 3 cut(s) | 49, 126, 169 |
| XspI | CTAG | 2 cut(s) | 176, 286 |