Rw4G025490

Pleiotropic regulatory locus

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0002996
Physical Location & Seq
Forward (+)
51598572 .. 51600646
2075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G025490.1

Sequence Viewer

Length: 1005 bp
ATGGAAACAACTGATCCCAGTAGGTGGCCTTGTCCAGTTTGGCATCATCCATGGAAGATGTACAAGGTCATTAGTGGCCACTTGGGATCTGTAGGATCGATTGCTTTCGACCCAAGTAATAAATGGTTTTGCACTGGCTCAGCAGATCGCACAATCAAGTTATGGGATGTAGCAACCGGAAAGCTACAGCTTACACTGACAGGACATACTCTTCAAATTCGAGGCCTTGCCGTTAGCAGCAAGCATCCCTATATGTTCTCTGCTGGCGATGACAAAGAAGTTAAATGTTGGGACCTCACACAGAATAAGTGGTGTTTACTGCTTGGCAACTCATCCCACATTCCCACTCTTGATATTCTACTCACAGGGGGACGTGATTCAGTATGCCGGGTTTGGGATATTCGTACCCAAACGCATGTTCATGCATTCTTGGGGCACGACAGCACAGTTTGCTCGGTTTTCACTAGACCAATCGATCCCCAAGTTGTCACTGGCTCTCACGACGCAACCATCAAGTTCTGGGACCTTAGAGGTGGAAAAGCAATGTCAACTCTCACACACCATAAGAAATCCGTGCGTGCAATGGCGCCACATCCTAAGGATCAGCATTGTTTTACTTCTGTGTCAGTAGACAACATTAAGAAGTTCGGATCGTTCAACCTTCCGAGAGGGGAATTTTTACACAATATGCTAGCTCAGCAGAACACCATAGTTAACACAATGGCGGTCAATGGTGGAGTTATGGCCACCGGAGATGACAGTGGGAGTTTGTGGTTTTGGGATTGGGAGAGTGGCCATAATTATCAGCAATCCCAAACAACTGTACAGCCATGTTCACTGAATAGTGAAGCTGGTATTTCTGCTCTTTCTTATGATGTCACTGGCACAAGGCTAGTTACTTGTGGAGTTGACAAGACGATCAAAATGTGGAAACAAGACAAAAACGCCACACCAGAAACTCATCCTCTCAATTTCAGTCCGCCTAAAGATATCCGGCACCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0000375 GO:0000377 GO:0000398 GO:0000974 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006508 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009743 GO:0009746 GO:0009749 GO:0009755 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009870 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010154 GO:0010182 GO:0010204 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0031461 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034284 GO:0034641 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0046483 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071011 GO:0071013 GO:0071310 GO:0071322 GO:0071495 GO:0071704 GO:0080008 GO:0080090 GO:0080134 GO:0090304 GO:0098542 GO:0099402 GO:1901360 GO:1901564 GO:1901700 GO:1901701 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1990234 GO:1990904 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
WD40

Protein Analysis

334

Amino Acids

37.25

Weight (kDa)

8.53

Isoelectric Point (pI)

38.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_CAF1B_HIR1 PF24105 17 - 105 2.1e-09 CAF1B/HIR1 beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 19 - 99 8.9e-07 MABP1/WDR62 second WD40 domain
WD40 PF00400 19 - 56 2.1e-10 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 19 - 102 4.4e-15 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 21 - 102 5.2e-12 WDR3 second beta-propeller domain
WD40_CDC20-Fz PF24807 21 - 103 3.6e-10 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 22 - 105 1.9e-17 WDR3 first beta-propeller domain
WD40_Gbeta PF25391 22 - 107 6.7e-09 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 24 - 111 1.5e-18 WDR5 beta-propeller domain
EIF3I PF24805 25 - 61 6.4e-06 EIF3I
WD40_Prp19 PF24814 30 - 103 6.7e-12 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 30 - 104 6.1e-11 WDHD1 first WD40 domain
Beta-prop_WDR90_POC16_2nd PF23393 33 - 107 3.4e-07 WDR90/POC16, second beta-propeller
WDR55 PF24796 34 - 180 1.4e-11 WDR55
WD40 PF00400 60 - 98 6.8e-07 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 65 - 196 9.4e-14 TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 67 - 189 4.6e-10 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 114 - 212 4.8e-06 WDR36/Utp21 first beta-propeller
EIF3I PF24805 118 - 313 1.7e-10 EIF3I
WD40_CDC20-Fz PF24807 118 - 207 2.6e-12 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 118 - 273 4.7e-11 WDHD1 first WD40 domain
WD40_Prp19 PF24814 118 - 310 4.3e-22 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 119 - 260 1.5e-16 WDR5 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 119 - 223 1.3e-08 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 119 - 190 2.7e-12 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 119 - 212 6.7e-16 WDR3 first beta-propeller domain
WD40_Gbeta PF25391 120 - 213 9.3e-11 G protein beta WD-40 repeat protein
Beta-prop_WDR90_POC16_2nd PF23393 120 - 219 7.7e-09 WDR90/POC16, second beta-propeller
WDR55 PF24796 120 - 207 2.7e-07 WDR55
Beta-prop_WDR75_1st PF23869 124 - 221 4.1e-06 WD repeat-containing protein 75 first beta-propeller
Beta-prop_EML PF23409 127 - 319 8.4e-11 Echinoderm microtubule-associated protein first beta-propeller
WDR55 PF24796 181 - 314 8.6e-07 WDR55
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 586, 996
AccB7I CCANNNNNTGG 1 cut(s) 24
AccI GTMKAC 1 cut(s) 630
AciI CCGC 2 cut(s) 725, 980
AclWI GGATC 6 cut(s) 8, 94, 103, 470, 609, 658
AcoI YGGCCR 3 cut(s) 76, 744, 793
AcsI RAATTY 2 cut(s) 216, 674
AcyI GRCGYC 1 cut(s) 587
AfaI GTAC 3 cut(s) 62, 406, 825
AfiI CCNNNNNNNGG 2 cut(s) 24, 394
AgsI TTSAA 2 cut(s) 215, 658
AjiI CACGTC 1 cut(s) 374
AjuI GAANNNNNNNTTGG 2 cut(s) 402, 434
AluBI AGCT 4 cut(s) 184, 190, 695, 851
AluI AGCT 4 cut(s) 184, 190, 695, 851
AlwI GGATC 6 cut(s) 8, 94, 103, 470, 609, 658
AoxI GGCC 5 cut(s) 26, 76, 223, 744, 793
ApeKI GCWGC 1 cut(s) 237
ApoI RAATTY 2 cut(s) 216, 674
AspLEI GCGC 1 cut(s) 589
AspS9I GGNCC 2 cut(s) 292, 523
AsuC2I CCSGG 1 cut(s) 389
AsuNHI GCTAGC 1 cut(s) 691
AvaII GGWCC 2 cut(s) 292, 523
AxyI CCTNAGG 1 cut(s) 597
BaeGI GKGCMC 1 cut(s) 438
BalI TGGCCA 3 cut(s) 78, 746, 795
BanI GGYRCC 2 cut(s) 586, 996
BbvI GCAGC 1 cut(s) 249
BccI CCATC 1 cut(s) 518
BceAI ACGGC 1 cut(s) 215
BcnI CCSGG 1 cut(s) 389
BfaI CTAG 4 cut(s) 465, 692, 893, 1003
BfmI CTRYAG 2 cut(s) 90, 185
BfoI RGCGCY 1 cut(s) 590
BisI GCNGC 1 cut(s) 238
BlpI GCTNAGC 2 cut(s) 139, 696
BlsI GCNGC 1 cut(s) 239
Bme1390I CCNGG 1 cut(s) 389
Bme18I GGWCC 2 cut(s) 292, 523
BmgBI CACGTC 1 cut(s) 374
BmgT120I GGNCC 2 cut(s) 292, 523
BmiI GGNNCC 4 cut(s) 293, 524, 588, 998
BmrFI CCNGG 1 cut(s) 389
BmrI ACTGGG 1 cut(s) 12
BmsI GCATC 2 cut(s) 52, 253
BmtI GCTAGC 1 cut(s) 695
BmuI ACTGGG 1 cut(s) 12
Bpu1102I GCTNAGC 2 cut(s) 139, 696
BpuMI CCSGG 1 cut(s) 389
Bsa29I ATCGAT 2 cut(s) 98, 474
BsaHI GRCGYC 1 cut(s) 587
BsaJI CCNNGG 1 cut(s) 50
BsaWI WCCGGW 2 cut(s) 176, 749
Bsc4I CCNNNNNNNGG 2 cut(s) 24, 394
Bse1I ACTGG 5 cut(s) 18, 35, 139, 496, 886
Bse21I CCTNAGG 1 cut(s) 597
Bse3DI GCAATG 2 cut(s) 549, 588
BseCI ATCGAT 2 cut(s) 98, 474
BseDI CCNNGG 1 cut(s) 50
BseGI GGATG 6 cut(s) 46, 172, 244, 332, 592, 961
BseLI CCNNNNNNNGG 2 cut(s) 24, 394
BseMI GCAATG 2 cut(s) 549, 588
BseMII CTCAG 2 cut(s) 153, 710
BseNI ACTGG 5 cut(s) 18, 35, 139, 496, 886
BseSI GKGCMC 1 cut(s) 438
BseXI GCAGC 1 cut(s) 249
BshFI GGCC 5 cut(s) 28, 78, 225, 746, 795
BshNI GGYRCC 2 cut(s) 586, 996
BshVI ATCGAT 2 cut(s) 98, 474
BsiSI CCGG 4 cut(s) 177, 388, 750, 994
BslFI GGGAC 3 cut(s) 305, 384, 536
BslI CCNNNNNNNGG 2 cut(s) 24, 394
BsmFI GGGAC 3 cut(s) 305, 384, 536
BsmI GAATGC 1 cut(s) 425
BsnI GGCC 5 cut(s) 28, 78, 225, 746, 795
Bsp1286I GDGCHC 1 cut(s) 438
Bsp1407I TGTACA 2 cut(s) 60, 823
Bsp143I GATC 8 cut(s) 13, 86, 95, 145, 475, 601, 650, 918
Bsp1720I GCTNAGC 2 cut(s) 139, 696
Bsp19I CCATGG 1 cut(s) 50
BspACI CCGC 2 cut(s) 725, 980
BspANI GGCC 5 cut(s) 28, 78, 225, 746, 795
BspCNI CTCAG 2 cut(s) 152, 709
BspDI ATCGAT 2 cut(s) 98, 474
BspLI GGNNCC 4 cut(s) 293, 524, 588, 998
BspOI GCTAGC 1 cut(s) 695
BspPI GGATC 6 cut(s) 8, 94, 103, 470, 609, 658
BspT107I GGYRCC 2 cut(s) 586, 996
BsrDI GCAATG 2 cut(s) 549, 588
BsrGI TGTACA 2 cut(s) 60, 823
BsrI ACTGG 5 cut(s) 18, 35, 139, 496, 886
BssECI CCNNGG 1 cut(s) 50
BssMI GATC 8 cut(s) 13, 86, 95, 145, 475, 601, 650, 918
BssNI GRCGYC 1 cut(s) 587
BssT1I CCWWGG 1 cut(s) 50
Bst4CI ACNGT 3 cut(s) 448, 761, 823
Bst6I CTCTTC 1 cut(s) 216
BstACI GRCGYC 1 cut(s) 587
BstAPI GCANNNNNTGC 1 cut(s) 450
BstAUI TGTACA 2 cut(s) 60, 823
BstC8I GCNNGC 4 cut(s) 242, 265, 579, 693
BstDEI CTNAG 4 cut(s) 139, 527, 597, 696
BstDSI CCRYGG 1 cut(s) 50
BstF5I GGATG 6 cut(s) 46, 172, 244, 332, 592, 961
BstH2I RGCGCY 1 cut(s) 590
BstHHI GCGC 1 cut(s) 589
BstKTI GATC 8 cut(s) 16, 89, 98, 148, 478, 604, 653, 921
BstMBI GATC 8 cut(s) 13, 86, 95, 145, 475, 601, 650, 918
BstMWI GCNNNNNNNGC 2 cut(s) 450, 697
BstNSI RCATGY 1 cut(s) 419
BstSCI CCNGG 1 cut(s) 387
BstSFI CTRYAG 2 cut(s) 90, 185
BstSLI GKGCMC 1 cut(s) 438
BstV1I GCAGC 1 cut(s) 249
BstX2I RGATCY 1 cut(s) 86
BstYI RGATCY 1 cut(s) 86
Bsu15I ATCGAT 2 cut(s) 98, 474
Bsu36I CCTNAGG 1 cut(s) 597
BsuRI GGCC 5 cut(s) 28, 78, 225, 746, 795
BsuTUI ATCGAT 2 cut(s) 98, 474
BtgI CCRYGG 1 cut(s) 50
BtgZI GCGATG 1 cut(s) 282
BtrI CACGTC 1 cut(s) 374
BtsCI GGATG 6 cut(s) 46, 172, 244, 332, 592, 961
BtsIMutI CAGTG 6 cut(s) 132, 194, 489, 766, 836, 879
Cac8I GCNNGC 4 cut(s) 242, 265, 579, 693
CfoI GCGC 1 cut(s) 589
Cfr13I GGNCC 2 cut(s) 292, 523
ClaI ATCGAT 2 cut(s) 98, 474
CseI GACGC 1 cut(s) 512
Csp6I GTAC 3 cut(s) 61, 405, 824
CviAII CATG 4 cut(s) 51, 416, 422, 831
CviQI GTAC 3 cut(s) 61, 405, 824
DdeI CTNAG 4 cut(s) 139, 527, 597, 696
DinI GGCGCC 1 cut(s) 588
DpnI GATC 8 cut(s) 15, 88, 97, 147, 477, 603, 652, 920
DpnII GATC 8 cut(s) 13, 86, 95, 145, 475, 601, 650, 918
EaeI YGGCCR 3 cut(s) 76, 744, 793
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
EciI GGCGGA 1 cut(s) 969
Eco130I CCWWGG 1 cut(s) 50
Eco147I AGGCCT 1 cut(s) 225
Eco32I GATATC 1 cut(s) 991
Eco47I GGWCC 2 cut(s) 292, 523
Eco81I CCTNAGG 1 cut(s) 597
EcoO109I RGGNCCY 2 cut(s) 292, 523
EcoRV GATATC 1 cut(s) 991
EcoT14I CCWWGG 1 cut(s) 50
EcoT22I ATGCAT 1 cut(s) 427
EgeI GGCGCC 1 cut(s) 588
EheI GGCGCC 1 cut(s) 588
ErhI CCWWGG 1 cut(s) 50
FaeI CATG 4 cut(s) 54, 419, 425, 834
FaqI GGGAC 3 cut(s) 305, 384, 536
FatI CATG 4 cut(s) 50, 415, 421, 830
FblI GTMKAC 1 cut(s) 630
Fnu4HI GCNGC 1 cut(s) 238
FokI GGATG 6 cut(s) 33, 179, 231, 319, 579, 948
Fsp4HI GCNGC 1 cut(s) 238
FspBI CTAG 4 cut(s) 465, 692, 893, 1003
GlaI GCGC 1 cut(s) 588
GluI GCNGC 1 cut(s) 238
HaeII RGCGCY 1 cut(s) 590
HaeIII GGCC 5 cut(s) 28, 78, 225, 746, 795
HapII CCGG 4 cut(s) 177, 388, 750, 994
HgaI GACGC 1 cut(s) 512
HhaI GCGC 1 cut(s) 589
Hin1I GRCGYC 1 cut(s) 587
Hin1II CATG 4 cut(s) 54, 419, 425, 834
Hin6I GCGC 1 cut(s) 587
HinP1I GCGC 1 cut(s) 587
HincII GTYRAC 3 cut(s) 549, 715, 910
HindII GTYRAC 3 cut(s) 549, 715, 910
HinfI GANTC 1 cut(s) 377
HpaI GTTAAC 1 cut(s) 715
HpaII CCGG 4 cut(s) 177, 388, 750, 994
Hpy166II GTNNAC 6 cut(s) 317, 549, 631, 715, 836, 910
Hpy188I TCNGA 2 cut(s) 650, 666
Hpy188III TCNNGA 2 cut(s) 350, 500
Hpy8I GTNNAC 6 cut(s) 317, 549, 631, 715, 836, 910
Hpy99I CGWCG 1 cut(s) 506
HpyAV CCTTC 1 cut(s) 671
HpyCH4III ACNGT 3 cut(s) 448, 761, 823
HpyCH4IV ACGT 1 cut(s) 373
HpyCH4V TGCA 3 cut(s) 132, 425, 581
HpyF10VI GCNNNNNNNGC 2 cut(s) 450, 697
HpyF3I CTNAG 4 cut(s) 139, 527, 597, 696
HpySE526I ACGT 1 cut(s) 373
Hsp92I GRCGYC 1 cut(s) 587
Hsp92II CATG 4 cut(s) 54, 419, 425, 834
HspAI GCGC 1 cut(s) 587
KasI GGCGCC 1 cut(s) 586
KspAI GTTAAC 1 cut(s) 715
Kzo9I GATC 8 cut(s) 13, 86, 95, 145, 475, 601, 650, 918
Lsp1109I GCAGC 1 cut(s) 249
LweI GCATC 2 cut(s) 52, 253
MaeI CTAG 4 cut(s) 465, 692, 893, 1003
MaeII ACGT 1 cut(s) 373
MaeIII GTNAC 3 cut(s) 487, 877, 895
MalI GATC 8 cut(s) 15, 88, 97, 147, 477, 603, 652, 920
MboI GATC 8 cut(s) 13, 86, 95, 145, 475, 601, 650, 918
MboII GAAGA 2 cut(s) 67, 203
MflI RGATCY 1 cut(s) 86
MhlI GDGCHC 1 cut(s) 438
MlsI TGGCCA 3 cut(s) 78, 746, 795
MluCI AATT 4 cut(s) 216, 674, 799, 970
MluNI TGGCCA 3 cut(s) 78, 746, 795
Mly113I GGCGCC 1 cut(s) 587
MnlI CCTC 5 cut(s) 215, 305, 524, 662, 975
Mox20I TGGCCA 3 cut(s) 78, 746, 795
Mph1103I ATGCAT 1 cut(s) 427
MscI TGGCCA 3 cut(s) 78, 746, 795
MseI TTAA 3 cut(s) 282, 639, 714
MslI CAYNNNNRTG 1 cut(s) 420
Msp20I TGGCCA 3 cut(s) 78, 746, 795
MspI CCGG 4 cut(s) 177, 388, 750, 994
MspR9I CCNGG 1 cut(s) 389
Mva1269I GAATGC 1 cut(s) 425
MwoI GCNNNNNNNGC 2 cut(s) 450, 697
NarI GGCGCC 1 cut(s) 587
NciI CCSGG 1 cut(s) 389
NcoI CCATGG 1 cut(s) 50
NdeII GATC 8 cut(s) 13, 86, 95, 145, 475, 601, 650, 918
NheI GCTAGC 1 cut(s) 691
NlaIII CATG 4 cut(s) 54, 419, 425, 834
NlaIV GGNNCC 4 cut(s) 293, 524, 588, 998
NmuCI GTSAC 2 cut(s) 487, 877
NsiI ATGCAT 1 cut(s) 427
NspI RCATGY 1 cut(s) 419
PceI AGGCCT 1 cut(s) 225
PctI GAATGC 1 cut(s) 425
PfeI GAWTC 1 cut(s) 377
PflMI CCANNNNNTGG 1 cut(s) 24
PkrI GCNGC 1 cut(s) 239
PluTI GGCGCC 1 cut(s) 590
PpuMI RGGWCCY 2 cut(s) 292, 523
Psp5II RGGWCCY 2 cut(s) 292, 523
PspN4I GGNNCC 4 cut(s) 293, 524, 588, 998
PspPI GGNCC 2 cut(s) 292, 523
PspPPI RGGWCCY 2 cut(s) 292, 523
PsuI RGATCY 1 cut(s) 86
RsaI GTAC 3 cut(s) 62, 406, 825
RsaNI GTAC 3 cut(s) 61, 405, 824
RseI CAYNNNNRTG 1 cut(s) 420
SaqAI TTAA 3 cut(s) 282, 639, 714
SatI GCNGC 1 cut(s) 238
Sau3AI GATC 8 cut(s) 13, 86, 95, 145, 475, 601, 650, 918
Sau96I GGNCC 2 cut(s) 292, 523
ScrFI CCNGG 1 cut(s) 389
SduI GDGCHC 1 cut(s) 438
SfaNI GCATC 2 cut(s) 52, 253
SfcI CTRYAG 2 cut(s) 90, 185
SfoI GGCGCC 1 cut(s) 588
SinI GGWCC 2 cut(s) 292, 523
SmiMI CAYNNNNRTG 1 cut(s) 420
Sse9I AATT 4 cut(s) 216, 674, 799, 970
SseBI AGGCCT 1 cut(s) 225
SsiI CCGC 2 cut(s) 725, 980
SspDI GGCGCC 1 cut(s) 586
SspMI CTAG 4 cut(s) 465, 692, 893, 1003
StuI AGGCCT 1 cut(s) 225
StyD4I CCNGG 1 cut(s) 387
StyI CCWWGG 1 cut(s) 50
TaaI ACNGT 3 cut(s) 448, 761, 823
TaiI ACGT 1 cut(s) 376
TaqI TCGA 4 cut(s) 98, 108, 220, 474
TasI AATT 4 cut(s) 216, 674, 799, 970
TatI WGTACW 2 cut(s) 60, 823
TfiI GAWTC 1 cut(s) 377
Tru1I TTAA 3 cut(s) 282, 639, 714
Tru9I TTAA 3 cut(s) 282, 639, 714
TscAI CASTG 6 cut(s) 139, 201, 496, 766, 843, 886
TseFI GTSAC 2 cut(s) 487, 877
TseI GCWGC 1 cut(s) 237
Tsp45I GTSAC 2 cut(s) 487, 877
TspDTI ATGAA 1 cut(s) 410
TspGWI ACGGA 1 cut(s) 562
TspRI CASTG 6 cut(s) 139, 201, 496, 766, 843, 886
Van91I CCANNNNNTGG 1 cut(s) 24
VpaK11BI GGWCC 2 cut(s) 292, 523
XapI RAATTY 2 cut(s) 216, 674
XceI RCATGY 1 cut(s) 419
XcmI CCANNNNNNNNNTGG 2 cut(s) 120, 488
XmiI GTMKAC 1 cut(s) 630
XspI CTAG 4 cut(s) 465, 692, 893, 1003
Zsp2I ATGCAT 1 cut(s) 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.