Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004224

Physical Location & Seq

Genomic Coordinates Forward (+)

11982361 .. 11986127

Gene Structure 3767 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29759

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGCCTTAGTACATGGGAAAATGCTTCTTATGAAACTCACATCAGTCATATTAGCAGCTGCAACGATATTGCTAGCAGCAGCAGCAGCTAATAAACCCCTCCCACCGCCTCAAGCCAAGCCCAACTGCCCAGACCGCTGTGGTAACCTCACAATTCCATATCCATTTGGCATCGGTGACGGCTGTTACATACCGCTGAAGGGACAGGAAAAGCAATTCGAACTCGCTTGTGATAATTCCACTAATCCCCCATCATTGAACTGGACTTACAGCACCTTCCGTGTTACTGATTTTATCCTTGCTGAGGGTCAATTGCAAGTTATGAATCCTATAAGCAAGGATTGTTACAACGAGAACGGCTCTAATGTGGAGTACAAAGTTCCTGGGCTCAATTATTATCCTCCTTTCAGCATTTCCGGTCGCAAAAACAACTTCGTCGCCGTAGGCTGCGACACTTCTGCTATTTTCCGGGGTTTTCGTGGTGAACAAGTGTTCTTCACGGGGTGCATGTCCTTGTGCCCCAACATCAGCACCGTGGATCAAGACTCTTGCTCTGGGGTCGGGTGTTGCCTGCAGAACAAAATCCCTGAAGGACTGAAGAATCTTTCTGTGATATTAAATAGCTATTACAATCATATGGATATATGGGCATTTAACCCCTGCAGCTATGCCTTCGTTGTGCAAGATGGCTACTTTAACTTCAGTGGTAAGAGGAGTTTCGAACAGCTCAAGAACATGGAGCAGATTCCAATGATCATTAATTGGCAGATTGGAAATGAGACATGCGAGGGAGCTAAAAAGAATGCGGTGGATTATGCATGCAAGGAATATTCCGAGTATATTGACGAGTGTTTGGCTGAAATTAACCCATGCGGGAATGGAACGTGCCAAAATTCACCTGAAAGTTACTCTTGTAAATGTAATAAAGGGTTCAAAAATGATGGTCCTCAGAAGTGCATTGCTCGTCCCACGGCAAACAACACTCCCCTGAAAATTTCATTGGGCATTTGTATTGGCTTCTTTGTTTTATTAGTCATAATTTTTGGGTTATATCGCGAATACAAGAGAAGACAGTTCAACCAAATGAAAAAAAAGTACTTTGAAGCAAACGGAGGGCCGAAATTACAACTACAATTAAAGCAATTGGCTAGTCAAAAAGAATCTCTTGCGACCCAAATCTTTACTGCTGAACAACTTAAGAAGGCAACAAAGGATTACGATGAAAATGAAAAAATTGGTGAAGGAGGTTATGGAATAGTCTACAAAGGCGTACTCGATGATAAAAGAGAGGTTGCAATAAAGATGTCCAAAATGACTGCCCAGGTCAAAAGTGATCAGTTTATTAATGAGGTCATCGTTCTTTCTCAAATCAGTCATAGAAATGTGGTGAGGCTGCTAGGCTGTTGTTTGGAGACAGAAACGCCTATGCTAGTTTACGAGTTTGTTGGTAATGGAACTCTTTATGACCACATTCATAAAAAGAAAGGACAACCACTTTCATTTGCACAACGATTGAAGATAGCAGCAGAAACTGCGACGGCACTTTCATACTTACATCACTCTACCACCATGCAAATTGTTCATCGAGATGTCAAGGCAACGAATATACTGTTGGATGAGAAACTTACCGCCAAAGTGTCGGACTTCGGAGCTTCAAAACTGGTTCCTGACGACAAAACTCAACTTTCAACTTTAGTGCAGGGGACAATGGGATACTTGGACCCTGAATATCTTCAATCCAACACACTAACAGAAAAGAGTGACGTTTATAGCTTTGGAGTTGTCCTCGTGGAGCTATTGACAAGCGAGAATGCAGTTCGTTTCGATAAACCCGAGGCAGAGAGAAACCTGGCCAACGTCTTTGTTTCTATAATTGAAGAAAAAGGTCTGCGCGCGCTGGGTCCAATTCTTGATGATGAAATAGTCAAGGATGGAAATTGGGAGATCATCGAAAAAGTTGCCAATCTTGCCAAAAGATGCTTAAGTGTGAAAGGAGACGAAAGGCCTACCATGAAACAAGTAGAGAGGGAGCTAGATGAAATACTGAGAACTTTGGCAAAGCAACCCGGGGGAAAGAAGCTTTATGCCTCCTCTTCCAAAGAGACGGACACCTCTCTTGAGTCACATTCAAACGATTACAATGTGGAGATTAGTAATGAAGGCGATGGTGGTTCTACTGGCATTATTAGCAGTGCAGAGTATGACGCCAGCATGCAAAATCAAGCCCAAAAGCCGTCCGGTTATGGTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK cEGF

Protein Analysis

750

Amino Acids

83.2

Weight (kDa)

6.24

Isoelectric Point (pI)

33.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	43 - 108	1.3e-10	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	406 - 674	2.4e-50	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	409 - 678	3e-51	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004224)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g10610
malus_domestica	MD05G1270300.v1.1 MD05G1270700.v1.1
rosa_chinensis	RchiOBHm_Chr1g0329511 RchiOBHm_Chr1g0336171 RchiOBHm_Chr5g0016711 RchiOBHm_Chr5g0016781 RchiOBHm_Chr5g0016821 RchiOBHm_Chr5g0017081 RchiOBHm_Chr5g0017111 RchiOBHm_Chr5g0017281 RchiOBHm_Chr5g0017311 RchiOBHm_Chr5g0054731
rosa_laevigata	RLG00000002400 RLG00000023080 RLG00000029879 RLG00000029880
rosa_multiflora	Rmu_sc0000441.1_g000086 Rmu_sc0001235.1_g000006 Rmu_sc0001423.1_g000044 Rmu_sc0003630.1_g000003 Rmu_sc0003801.1_g000025 Rmu_sc0005319.1_g000021 Rmu_sc0005418.1_g000011 Rmu_sc0008053.1_g000024
rosa_roxburghii	Rroxscaffold_1G00012580 Rroxscaffold_1G00013300 Rroxscaffold_4G00321010 Rroxscaffold_6G00395830 Rroxscaffold_6G00395840
rosa_rugosa	Rorug03G0224700
rosa_wichuraiana	Rw3G024380 Rw3G024480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1260
AccII	CGCG	3 cut(s)	1056, 1893, 1895
AciI	CCGC	6 cut(s)	107, 136, 194, 806, 873, 1629
AclWI	GGATC	1 cut(s)	546
AcoI	YGGCCR	1 cut(s)	1851
AcsI	RAATTY	2 cut(s)	892, 993
AcuI	CTGAAG	4 cut(s)	218, 609, 617, 685
AcyI	GRCGYC	1 cut(s)	2205
AdeI	CACNNNGTG	1 cut(s)	504
AfaI	GTAC	4 cut(s)	12, 374, 1097, 1272
AfiI	CCNNNNNNNGG	2 cut(s)	200, 304
AflII	CTTAAG	2 cut(s)	1196, 1981
AjnI	CCWGG	3 cut(s)	382, 1320, 1848
AjuI	GAANNNNNNNTTGG	4 cut(s)	983, 1015, 1595, 1627
Alw26I	GTCTC	4 cut(s)	773, 1406, 1989, 2096
AlwI	GGATC	1 cut(s)	546
AlwNI	CAGNNNCTG	1 cut(s)	1532
Ama87I	CYCGRG	2 cut(s)	1832, 2066
AoxI	GGCC	4 cut(s)	3, 1115, 1851, 2003
ApoI	RAATTY	2 cut(s)	892, 993
AseI	ATTAAT	2 cut(s)	759, 1344
Asp700I	GAANNNNTTC	1 cut(s)	1731
AspLEI	GCGC	3 cut(s)	1893, 1895, 1897
AspS9I	GGNCC	4 cut(s)	944, 1115, 1720, 1901
AsuC2I	CCSGG	3 cut(s)	470, 2067, 2068
AsuHPI	GGTGA	5 cut(s)	188, 494, 888, 1250, 1399
AsuII	TTCGAA	2 cut(s)	219, 720
AsuNHI	GCTAGC	1 cut(s)	73
AvaI	CYCGRG	2 cut(s)	1832, 2066
AvaII	GGWCC	3 cut(s)	944, 1720, 1901
BaeGI	GKGCMC	1 cut(s)	521
BalI	TGGCCA	1 cut(s)	1853
BanII	GRGCYC	1 cut(s)	390
BauI	CACGAG	1 cut(s)	1787
BbsI	GAAGAC	1 cut(s)	1075
BbvCI	CCTCAGC	1 cut(s)	303
BccI	CCATC	5 cut(s)	259, 680, 935, 1925, 2159
BceAI	ACGGC	6 cut(s)	196, 373, 425, 987, 1554, 2218
BcgI	CGANNNNNNTGC	4 cut(s)	440, 474, 1940, 1974
BciT130I	CCWGG	3 cut(s)	384, 1322, 1850
BciVI	GTATCC	1 cut(s)	1706
BclI	TGATCA	2 cut(s)	753, 1333
BcnI	CCSGG	3 cut(s)	470, 2067, 2068
BcoDI	GTCTC	4 cut(s)	773, 1406, 1989, 2096
BfaI	CTAG	5 cut(s)	74, 1149, 1397, 1430, 2033
BfmI	CTRYAG	2 cut(s)	572, 661
BfrI	CTTAAG	2 cut(s)	1196, 1981
BfuI	GTATCC	1 cut(s)	1706
BmcAI	AGTACT	1 cut(s)	1097
Bme1390I	CCNGG	6 cut(s)	384, 470, 1322, 1850, 2067, 2068
Bme18I	GGWCC	3 cut(s)	944, 1720, 1901
BmeT110I	CYCGRG	2 cut(s)	1832, 2066
BmgT120I	GGNCC	4 cut(s)	944, 1115, 1720, 1901
BmiI	GGNNCC	3 cut(s)	1665, 1722, 1902
BmrFI	CCNGG	6 cut(s)	384, 470, 1322, 1850, 2067, 2068
BmsI	GCATC	2 cut(s)	180, 1967
BmtI	GCTAGC	1 cut(s)	77
BpiI	GAAGAC	1 cut(s)	1075
BplI	GAGNNNNNCTC	4 cut(s)	344, 376, 1770, 1802
Bpu10I	CCTNAGC	1 cut(s)	303
Bpu14I	TTCGAA	2 cut(s)	219, 720
BpuEI	CTTGAG	3 cut(s)	96, 713, 2138
BpuMI	CCSGG	3 cut(s)	470, 2067, 2068
BsaHI	GRCGYC	1 cut(s)	2205
BsaJI	CCNNGG	8 cut(s)	383, 469, 534, 969, 1320, 1833, 2066, 2067
BsaWI	WCCGGW	2 cut(s)	416, 2237
Bsc4I	CCNNNNNNNGG	2 cut(s)	200, 304
Bse1I	ACTGG	3 cut(s)	266, 1665, 2182
Bse3DI	GCAATG	1 cut(s)	957
BseBI	CCWGG	3 cut(s)	384, 1322, 1850
BseDI	CCNNGG	8 cut(s)	383, 469, 534, 969, 1320, 1833, 2066, 2067
BseGI	GGATG	2 cut(s)	1621, 1936
BseLI	CCNNNNNNNGG	2 cut(s)	200, 304
BseMI	GCAATG	1 cut(s)	957
BseMII	CTCAG	3 cut(s)	294, 962, 2036
BseNI	ACTGG	3 cut(s)	266, 1665, 2182
BsePI	GCGCGC	2 cut(s)	1891, 1893
BseRI	GAGGAG	2 cut(s)	727, 2080
BseSI	GKGCMC	1 cut(s)	521
BseYI	CCCAGC	1 cut(s)	1897
BsgI	GTGCAG	2 cut(s)	1718, 2214
Bsh1236I	CGCG	3 cut(s)	1056, 1893, 1895
Bsh1285I	CGRYCG	1 cut(s)	421
BshFI	GGCC	4 cut(s)	5, 1117, 1853, 2005
BsiEI	CGRYCG	1 cut(s)	421
BsiHKCI	CYCGRG	2 cut(s)	1832, 2066
BsiSI	CCGG	4 cut(s)	417, 469, 2067, 2238
BslFI	GGGAC	3 cut(s)	216, 951, 1717
BslI	CCNNNNNNNGG	2 cut(s)	200, 304
BsmAI	GTCTC	4 cut(s)	773, 1406, 1989, 2096
BsmBI	CGTCTC	2 cut(s)	1989, 2096
BsmFI	GGGAC	3 cut(s)	216, 951, 1717
BsmI	GAATGC	2 cut(s)	808, 1816
BsnI	GGCC	4 cut(s)	5, 1117, 1853, 2005
BsoBI	CYCGRG	2 cut(s)	1832, 2066
Bsp119I	TTCGAA	2 cut(s)	219, 720
Bsp1286I	GDGCHC	2 cut(s)	390, 521
Bsp143I	GATC	4 cut(s)	538, 753, 1333, 1944
Bsp68I	TCGCGA	1 cut(s)	1056
BspACI	CCGC	6 cut(s)	107, 136, 194, 806, 873, 1629
BspANI	GGCC	4 cut(s)	5, 1117, 1853, 2005
BspCNI	CTCAG	3 cut(s)	295, 961, 2037
BspFNI	CGCG	3 cut(s)	1056, 1893, 1895
BspLI	GGNNCC	3 cut(s)	1665, 1722, 1902
BspMAI	CTGCAG	2 cut(s)	576, 665
BspOI	GCTAGC	1 cut(s)	77
BspPI	GGATC	1 cut(s)	546
BspT104I	TTCGAA	2 cut(s)	219, 720
BspTI	CTTAAG	2 cut(s)	1196, 1981
BsrDI	GCAATG	1 cut(s)	957
BsrI	ACTGG	3 cut(s)	266, 1665, 2182
BssECI	CCNNGG	8 cut(s)	383, 469, 534, 969, 1320, 1833, 2066, 2067
BssHII	GCGCGC	2 cut(s)	1891, 1893
BssMI	GATC	4 cut(s)	538, 753, 1333, 1944
BssNI	GRCGYC	1 cut(s)	2205
BssSI	CACGAG	1 cut(s)	1787
Bst2BI	CACGAG	1 cut(s)	1787
Bst2UI	CCWGG	3 cut(s)	384, 1322, 1850
Bst4CI	ACNGT	3 cut(s)	535, 1074, 1611
Bst6I	CTCTTC	1 cut(s)	2098
BstACI	GRCGYC	1 cut(s)	2205
BstAFI	CTTAAG	2 cut(s)	1196, 1981
BstAPI	GCANNNNNTGC	1 cut(s)	1532
BstBI	TTCGAA	2 cut(s)	219, 720
BstC8I	GCNNGC	7 cut(s)	75, 572, 820, 1893, 1895, 2209, 2213
BstDEI	CTNAG	4 cut(s)	7, 303, 948, 2045
BstDSI	CCRYGG	2 cut(s)	534, 969
BstEII	GGTNACC	1 cut(s)	143
BstENI	CCTNNNNNAGG	1 cut(s)	302
BstF5I	GGATG	2 cut(s)	1621, 1936
BstFNI	CGCG	3 cut(s)	1056, 1893, 1895
BstHHI	GCGC	3 cut(s)	1893, 1895, 1897
BstKTI	GATC	4 cut(s)	541, 756, 1336, 1947
BstMAI	GTCTC	4 cut(s)	773, 1406, 1989, 2096
BstMBI	GATC	4 cut(s)	538, 753, 1333, 1944
BstMCI	CGRYCG	1 cut(s)	421
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 86, 135, 1532, 1967, 2187
BstNI	CCWGG	3 cut(s)	384, 1322, 1850
BstNSI	RCATGY	4 cut(s)	511, 786, 822, 2215
BstPI	GGTNACC	1 cut(s)	143
BstSCI	CCNGG	6 cut(s)	382, 468, 1320, 1848, 2065, 2066
BstSFI	CTRYAG	2 cut(s)	572, 661
BstSLI	GKGCMC	1 cut(s)	521
BstUI	CGCG	3 cut(s)	1056, 1893, 1895
BstV2I	GAAGAC	1 cut(s)	1075
BsuI	GTATCC	1 cut(s)	1706
BsuRI	GGCC	4 cut(s)	5, 1117, 1853, 2005
BtgI	CCRYGG	2 cut(s)	534, 969
BtgZI	GCGATG	1 cut(s)	2178
BtsCI	GGATG	2 cut(s)	1621, 1936
BtsI	GCAGTG	1 cut(s)	2197
BtsIMutI	CAGTG	2 cut(s)	709, 2197
BtuMI	TCGCGA	1 cut(s)	1056
Cac8I	GCNNGC	7 cut(s)	75, 572, 820, 1893, 1895, 2209, 2213
CaiI	CAGNNNCTG	1 cut(s)	1532
CfoI	GCGC	3 cut(s)	1893, 1895, 1897
Cfr13I	GGNCC	4 cut(s)	944, 1115, 1720, 1901
Cfr9I	CCCGGG	1 cut(s)	2066
CseI	GACGC	1 cut(s)	2213
Csp6I	GTAC	4 cut(s)	11, 373, 1096, 1271
CviAII	CATG	9 cut(s)	14, 508, 736, 783, 819, 870, 1570, 2011, 2212
CviQI	GTAC	4 cut(s)	11, 373, 1096, 1271
DdeI	CTNAG	4 cut(s)	7, 303, 948, 2045
DpnI	GATC	4 cut(s)	540, 755, 1335, 1946
DpnII	GATC	4 cut(s)	538, 753, 1333, 1944
DraIII	CACNNNGTG	1 cut(s)	504
EaeI	YGGCCR	1 cut(s)	1851
Eam1104I	CTCTTC	1 cut(s)	2098
EarI	CTCTTC	1 cut(s)	2098
Eco147I	AGGCCT	1 cut(s)	2005
Eco24I	GRGCYC	1 cut(s)	390
Eco47I	GGWCC	3 cut(s)	944, 1720, 1901
Eco57I	CTGAAG	4 cut(s)	218, 609, 617, 685
Eco88I	CYCGRG	2 cut(s)	1832, 2066
Eco91I	GGTNACC	1 cut(s)	143
EcoNI	CCTNNNNNAGG	1 cut(s)	302
EcoO65I	GGTNACC	1 cut(s)	143
EcoRII	CCWGG	3 cut(s)	382, 1320, 1848
EcoT22I	ATGCAT	1 cut(s)	820
EcoT38I	GRGCYC	1 cut(s)	390
Esp3I	CGTCTC	2 cut(s)	1989, 2096
FaeI	CATG	9 cut(s)	17, 511, 739, 786, 822, 873, 1573, 2014, 2215
FalI	AAGNNNNNCTT	4 cut(s)	895, 927, 1149, 1181
FaqI	GGGAC	3 cut(s)	216, 951, 1717
FatI	CATG	9 cut(s)	13, 507, 735, 782, 818, 869, 1569, 2010, 2211
FauI	CCCGC	1 cut(s)	866
FauNDI	CATATG	1 cut(s)	636
FbaI	TGATCA	2 cut(s)	753, 1333
FblI	GTMKAC	1 cut(s)	1260
FokI	GGATG	2 cut(s)	1628, 1943
FriOI	GRGCYC	1 cut(s)	390
FspBI	CTAG	5 cut(s)	74, 1149, 1397, 1430, 2033
GlaI	GCGC	3 cut(s)	1892, 1894, 1896
GsaI	CCCAGC	1 cut(s)	1901
HaeIII	GGCC	4 cut(s)	5, 1117, 1853, 2005
HapII	CCGG	4 cut(s)	417, 469, 2067, 2238
HgaI	GACGC	1 cut(s)	2213
HhaI	GCGC	3 cut(s)	1893, 1895, 1897
Hin1I	GRCGYC	1 cut(s)	2205
Hin1II	CATG	9 cut(s)	17, 511, 739, 786, 822, 873, 1573, 2014, 2215
Hin6I	GCGC	3 cut(s)	1891, 1893, 1895
HinP1I	GCGC	3 cut(s)	1891, 1893, 1895
HindIII	AAGCTT	1 cut(s)	2078
HinfI	GANTC	6 cut(s)	325, 545, 601, 745, 1160, 2120
HpaII	CCGG	4 cut(s)	417, 469, 2067, 2238
HphI	GGTGA	5 cut(s)	188, 494, 888, 1250, 1399
Hpy166II	GTNNAC	3 cut(s)	485, 1261, 1435
Hpy188I	TCNGA	4 cut(s)	835, 951, 1642, 1649
Hpy188III	TCNNGA	7 cut(s)	542, 730, 1055, 1586, 1667, 1910, 2117
Hpy8I	GTNNAC	3 cut(s)	485, 1261, 1435
Hpy99I	CGWCG	2 cut(s)	440, 1540
HpyAV	CCTTC	7 cut(s)	193, 286, 584, 682, 1195, 1235, 2153
HpyCH4III	ACNGT	3 cut(s)	535, 1074, 1611
HpyCH4IV	ACGT	3 cut(s)	884, 1764, 1857
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 86, 135, 1532, 1967, 2187
HpyF3I	CTNAG	4 cut(s)	7, 303, 948, 2045
HpySE526I	ACGT	3 cut(s)	884, 1764, 1857
Hsp92I	GRCGYC	1 cut(s)	2205
Hsp92II	CATG	9 cut(s)	17, 511, 739, 786, 822, 873, 1573, 2014, 2215
HspAI	GCGC	3 cut(s)	1891, 1893, 1895
Ksp22I	TGATCA	2 cut(s)	753, 1333
Kzo9I	GATC	4 cut(s)	538, 753, 1333, 1944
LmnI	GCTCC	5 cut(s)	739, 791, 1649, 1792, 2029
LweI	GCATC	2 cut(s)	180, 1967
MaeI	CTAG	5 cut(s)	74, 1149, 1397, 1430, 2033
MaeII	ACGT	3 cut(s)	884, 1764, 1857
MaeIII	GTNAC	8 cut(s)	143, 176, 185, 283, 344, 905, 1760, 2121
MalI	GATC	4 cut(s)	540, 755, 1335, 1946
MboI	GATC	4 cut(s)	538, 753, 1333, 1944
MboII	GAAGA	7 cut(s)	487, 610, 1080, 1528, 1724, 1889, 2085
MfeI	CAATTG	2 cut(s)	311, 1142
MhlI	GDGCHC	2 cut(s)	390, 521
MlsI	TGGCCA	1 cut(s)	1853
MluNI	TGGCCA	1 cut(s)	1853
MlyI	GAGTC	2 cut(s)	539, 2129
MmeI	TCCRAC	3 cut(s)	1593, 1620, 1764
Mox20I	TGGCCA	1 cut(s)	1853
Mph1103I	ATGCAT	1 cut(s)	820
MroXI	GAANNNNTTC	1 cut(s)	1731
MscI	TGGCCA	1 cut(s)	1853
MseI	TTAA	9 cut(s)	617, 654, 696, 759, 864, 1136, 1197, 1344, 1982
MslI	CAYNNNNRTG	2 cut(s)	1380, 1587
Msp20I	TGGCCA	1 cut(s)	1853
MspA1I	CMGCKG	3 cut(s)	59, 138, 196
MspCI	CTTAAG	2 cut(s)	1196, 1981
MspI	CCGG	4 cut(s)	417, 469, 2067, 2238
MspR9I	CCNGG	6 cut(s)	384, 470, 1322, 1850, 2067, 2068
MunI	CAATTG	2 cut(s)	311, 1142
Mva1269I	GAATGC	2 cut(s)	808, 1816
MvaI	CCWGG	3 cut(s)	384, 1322, 1850
MvnI	CGCG	3 cut(s)	1056, 1893, 1895
MwoI	GCNNNNNNNGC	6 cut(s)	83, 86, 135, 1532, 1967, 2187
NciI	CCSGG	3 cut(s)	470, 2067, 2068
NdeI	CATATG	1 cut(s)	636
NdeII	GATC	4 cut(s)	538, 753, 1333, 1944
NheI	GCTAGC	1 cut(s)	73
NlaIII	CATG	9 cut(s)	17, 511, 739, 786, 822, 873, 1573, 2014, 2215
NlaIV	GGNNCC	3 cut(s)	1665, 1722, 1902
NmuCI	GTSAC	3 cut(s)	176, 1760, 2121
NruI	TCGCGA	1 cut(s)	1056
NsiI	ATGCAT	1 cut(s)	820
NspI	RCATGY	4 cut(s)	511, 786, 822, 2215
NspV	TTCGAA	2 cut(s)	219, 720
PaeI	GCATGC	2 cut(s)	822, 2215
PauI	GCGCGC	2 cut(s)	1891, 1893
PceI	AGGCCT	1 cut(s)	2005
PcsI	WCGNNNNNNNCGW	1 cut(s)	1830
PctI	GAATGC	2 cut(s)	808, 1816
PdmI	GAANNNNTTC	1 cut(s)	1731
PfeI	GAWTC	4 cut(s)	325, 601, 745, 1160
PleI	GAGTC	2 cut(s)	539, 2128
PpsI	GAGTC	2 cut(s)	539, 2128
PshBI	ATTAAT	2 cut(s)	759, 1344
Psp6I	CCWGG	3 cut(s)	382, 1320, 1848
PspEI	GGTNACC	1 cut(s)	143
PspFI	CCCAGC	1 cut(s)	1897
PspGI	CCWGG	3 cut(s)	382, 1320, 1848
PspN4I	GGNNCC	3 cut(s)	1665, 1722, 1902
PspPI	GGNCC	4 cut(s)	944, 1115, 1720, 1901
PsrI	GAACNNNNNNTAC	2 cut(s)	251, 283
PstI	CTGCAG	2 cut(s)	576, 665
PstNI	CAGNNNCTG	1 cut(s)	1532
PteI	GCGCGC	2 cut(s)	1891, 1893
PvuII	CAGCTG	1 cut(s)	59
RruI	TCGCGA	1 cut(s)	1056
RsaI	GTAC	4 cut(s)	12, 374, 1097, 1272
RsaNI	GTAC	4 cut(s)	11, 373, 1096, 1271
RseI	CAYNNNNRTG	2 cut(s)	1380, 1587
SaqAI	TTAA	9 cut(s)	617, 654, 696, 759, 864, 1136, 1197, 1344, 1982
Sau3AI	GATC	4 cut(s)	538, 753, 1333, 1944
Sau96I	GGNCC	4 cut(s)	944, 1115, 1720, 1901
ScaI	AGTACT	1 cut(s)	1097
SchI	GAGTC	2 cut(s)	539, 2129
ScrFI	CCNGG	6 cut(s)	384, 470, 1322, 1850, 2067, 2068
SduI	GDGCHC	2 cut(s)	390, 521
SfaNI	GCATC	2 cut(s)	180, 1967
SfcI	CTRYAG	2 cut(s)	572, 661
SfuI	TTCGAA	2 cut(s)	219, 720
SinI	GGWCC	3 cut(s)	944, 1720, 1901
SmaI	CCCGGG	1 cut(s)	2068
SmiMI	CAYNNNNRTG	2 cut(s)	1380, 1587
SmlI	CTYRAG	5 cut(s)	111, 728, 1196, 1981, 2117
SmoI	CTYRAG	5 cut(s)	111, 728, 1196, 1981, 2117
SphI	GCATGC	2 cut(s)	822, 2215
SseBI	AGGCCT	1 cut(s)	2005
SsiI	CCGC	6 cut(s)	107, 136, 194, 806, 873, 1629
SspI	AATATT	1 cut(s)	830
SspMI	CTAG	5 cut(s)	74, 1149, 1397, 1430, 2033
StuI	AGGCCT	1 cut(s)	2005
StyD4I	CCNGG	6 cut(s)	382, 468, 1320, 1848, 2065, 2066
TaaI	ACNGT	3 cut(s)	535, 1074, 1611
TaiI	ACGT	3 cut(s)	887, 1767, 1860
TaqI	TCGA	7 cut(s)	219, 720, 1275, 1585, 1824, 1950, 2248
TatI	WGTACW	3 cut(s)	10, 372, 1095
TfiI	GAWTC	4 cut(s)	325, 601, 745, 1160
Tru1I	TTAA	9 cut(s)	617, 654, 696, 759, 864, 1136, 1197, 1344, 1982
Tru9I	TTAA	9 cut(s)	617, 654, 696, 759, 864, 1136, 1197, 1344, 1982
TscAI	CASTG	2 cut(s)	709, 2197
TseFI	GTSAC	3 cut(s)	176, 1760, 2121
Tsp45I	GTSAC	3 cut(s)	176, 1760, 2121
TspGWI	ACGGA	3 cut(s)	269, 1125, 2120
TspMI	CCCGGG	1 cut(s)	2066
TspRI	CASTG	2 cut(s)	709, 2197
Vha464I	CTTAAG	2 cut(s)	1196, 1981
VpaK11BI	GGWCC	3 cut(s)	944, 1720, 1901
VspI	ATTAAT	2 cut(s)	759, 1344
XagI	CCTNNNNNAGG	1 cut(s)	302
XapI	RAATTY	2 cut(s)	892, 993
XceI	RCATGY	4 cut(s)	511, 786, 822, 2215
XcmI	CCANNNNNNNNNTGG	1 cut(s)	258
XmaI	CCCGGG	1 cut(s)	2066
XmiI	GTMKAC	1 cut(s)	1260
XmnI	GAANNNNTTC	1 cut(s)	1731
XspI	CTAG	5 cut(s)	74, 1149, 1397, 1430, 2033
ZrmI	AGTACT	1 cut(s)	1097
Zsp2I	ATGCAT	1 cut(s)	820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.