Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000441.1

Orthogroup ID

OG0004224

Physical Location & Seq

Genomic Coordinates Reverse (-)

311293 .. 315944

Gene Structure 4652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000441.1_g000086.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

atgcttcttatgaaactctcattagtcttattagcagctgcaaagatattgctagcagcagcggctaataaacccctcccaccgcctcaagccaagcccgaatgcccagaccgctgtggtaacctcacaattccatatccatttggcatcggtgacggctgttacataccactgaagggacaggaaaagcaattcgaactcgcttgtgatgattccactaatcctccatcattgaactggacgcacagcagcctcagtattactgattttatccttgctgagggtcagttggaagttctgagttggataagcaaggattgttacaacaagttcggtcctatgggttgggtgaattctgaggtcacttggtatcctcctttcagcatttccgggcgcaataacaacctcgtagccataggctgcgacacttctgctgttttccggggttttcgtggtgaacaaaagttcatgacgggatgcatgtccgtgtgcctcagcatcagcaccatggattataacgcttgctctggtgtcgggtgttgccagaccaaaatccctgagggactgaataatcttactttgagattgggtagctattacaatcataaggatatattgaattttaatccttgcagctatgccttccttgtgaaagaaggctactttcacttcaacggtacgagtagtttcgaagagctcaagaacatagagcggtttccaatgatcgttaattggcagattggaaatgagacatgcgaggtagctaaaaataatgctgtagattatgcatgcaaggccaattccaagtgtgtcaaccagaccgagggcccataccctggttactattgccggtgcttaccaggctacgaagggaacccatacatcggttgtcgagatattgacgagtgttcggctgaaattgacccatgcgagaatggaacgtgccaaaattcacctgttgcaagttactcttgtaaatgtaataaagggttcaaaaatgatggtcttcagaagtgcattgctcgtcccacggcgaacaacactgccttgaaattttcattgggcatatgtataggcttttgtgttctgttcatcgtaatttttgggttatatcgtgaattcaagagaagacagtggaacaaaatgaaaaaaaagtactttgaagcaaacggcgggcaaaaattacaattggcaagtcaaaaagagtctcttacagtccaaatctttactgcagaagaacttaagaaggcaacaaaggattacgatgaaaatgaaaaaattggtgaaggaggctatggaatagtctacaaaggcgtactcgatgatggaagagtggttgcaataaagatgtccaaaatttcagaacagaaaaaaaaaataaagatgtccgacgaaagtgatcaattaattaatgaggtcattgttctttctcgaatcagtcataaacatgtggtgaggctgctaggatgctgtttagagacagaaacgcctaggctagtttacgagtttgttgataatggaactctttatgatcacattcataaaaagaaaggaaaaccactttcatttgcacaacgattgaagatagcggcacaagctgcaacggcactttcatacttacatcacttcaccgccatgaaaattgttcatcgagatgtcaaggcaacgaatatactgttggatgagaatcttacggccaaagtgtcggacttcggagcttcaaaactggttcctgacgacaaagctcaactttcaactttagtgcagggtacaatgggatatttggaccctgaatatcttcagtccagcacactaacagacaagagtgacgtttatagctttggagttgtcctcgtggagctactgacaggcgaaaatgctgttcgtttagataaaccagagaatgagagaatcctggccaacgtctttgtttctacatttcataaaggtccgctggacccaattcttgatgatgaaatagtcgaggatggaaatcaggagatcatcaaagaagtggccaagctcgcagaaagatgcttatgtgtgaaaggaagcgaaagacctgacatggaagacgtgaagaggaagctacatgaaatactggaaacattggtagagcaaccagggggaaagaagcttcatgcctcctcttccaaagacacagaccgctctcttgagtcacattcagacgcttacaatgtggagattagtgatgaaggcgatggtggttctactggcattattagcagtgcagagtatgacgccagtatgcaaaatcaagcccaaaagccgtccggtacttatggtcgataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK cEGF

Protein Analysis

770

Amino Acids

85.37

Weight (kDa)

5.97

Isoelectric Point (pI)

32.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004224)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g10610
malus_domestica	MD05G1270300.v1.1 MD05G1270700.v1.1
rosa_chinensis	RchiOBHm_Chr1g0329511 RchiOBHm_Chr1g0336171 RchiOBHm_Chr5g0016711 RchiOBHm_Chr5g0016781 RchiOBHm_Chr5g0016821 RchiOBHm_Chr5g0017081 RchiOBHm_Chr5g0017111 RchiOBHm_Chr5g0017281 RchiOBHm_Chr5g0017311 RchiOBHm_Chr5g0054731
rosa_laevigata	RLG00000002400 RLG00000023080 RLG00000029879 RLG00000029880
rosa_multiflora	Rmu_sc0000441.1_g000086 Rmu_sc0001235.1_g000006 Rmu_sc0001423.1_g000044 Rmu_sc0003630.1_g000003 Rmu_sc0003801.1_g000025 Rmu_sc0005319.1_g000021 Rmu_sc0005418.1_g000011 Rmu_sc0008053.1_g000024
rosa_roxburghii	Rroxscaffold_1G00012580 Rroxscaffold_1G00013300 Rroxscaffold_4G00321010 Rroxscaffold_6G00395830 Rroxscaffold_6G00395840
rosa_rugosa	Rorug03G0224700
rosa_wichuraiana	Rw3G024380 Rw3G024480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	516
AccB7I	CCANNNNNTGG	1 cut(s)	836
AccBSI	CCGCTC	2 cut(s)	712, 2169
AccI	GTMKAC	1 cut(s)	1305
AciI	CCGC	9 cut(s)	62, 83, 112, 712, 1173, 1589, 1632, 1952, 2167
AcoI	YGGCCR	3 cut(s)	1695, 1917, 2016
AcsI	RAATTY	6 cut(s)	352, 619, 949, 1052, 1118, 1356
AcuI	CTGAAG	3 cut(s)	194, 992, 1784
AcyI	GRCGYC	1 cut(s)	2262
AfaI	GTAC	5 cut(s)	679, 1157, 1317, 1771, 2299
AfiI	CCNNNNNNNGG	5 cut(s)	176, 280, 823, 836, 884
AflII	CTTAAG	1 cut(s)	1241
AflIII	ACRYGT	1 cut(s)	1447
AjiI	CACGTC	1 cut(s)	2077
AjnI	CCWGG	4 cut(s)	835, 859, 1914, 2122
AjuI	GAANNNNNNNTTGG	4 cut(s)	1043, 1075, 1661, 1693
Alw21I	GWGCWC	1 cut(s)	699
Alw26I	GTCTC	3 cut(s)	743, 1212, 1472
AoxI	GGCC	5 cut(s)	795, 826, 1695, 1917, 2016
ApaI	GGGCCC	1 cut(s)	830
ApeKI	GCWGC	9 cut(s)	35, 38, 56, 59, 249, 420, 633, 1459, 1598
ApoI	RAATTY	6 cut(s)	352, 619, 949, 1052, 1118, 1356
AseI	ATTAAT	2 cut(s)	1406, 1410
Asp700I	GAANNNNTTC	1 cut(s)	1797
AspA2I	CCTAGG	1 cut(s)	1490
AspLEI	GCGC	1 cut(s)	396
AspS9I	GGNCC	6 cut(s)	335, 826, 827, 1786, 1949, 1957
AsuC2I	CCSGG	2 cut(s)	391, 443
AsuHPI	GGTGA	7 cut(s)	164, 361, 467, 945, 1295, 1465, 1621
AsuII	TTCGAA	2 cut(s)	195, 690
AsuNHI	GCTAGC	1 cut(s)	52
AvaII	GGWCC	4 cut(s)	335, 1786, 1949, 1957
AvrII	CCTAGG	1 cut(s)	1490
AxyI	CCTNAGG	1 cut(s)	558
BaeGI	GKGCMC	1 cut(s)	830
BalI	TGGCCA	2 cut(s)	1919, 2018
BanII	GRGCYC	2 cut(s)	699, 830
BauI	CACGAG	1 cut(s)	1853
BbsI	GAAGAC	3 cut(s)	998, 1135, 2079
Bbv12I	GWGCWC	1 cut(s)	699
BbvCI	CCTCAGC	2 cut(s)	279, 494
BbvI	GCAGC	9 cut(s)	25, 47, 68, 71, 261, 407, 645, 1446, 1585
BccI	CCATC	5 cut(s)	235, 995, 1319, 1982, 2216
BceAI	ACGGC	6 cut(s)	172, 1047, 1186, 1620, 1710, 2275
BcgI	CGANNNNNNTGC	2 cut(s)	413, 447
BciT130I	CCWGG	4 cut(s)	837, 861, 1916, 2124
BciVI	GTATCC	1 cut(s)	381
BclI	TGATCA	2 cut(s)	1399, 1531
BcnI	CCSGG	2 cut(s)	391, 443
BcoDI	GTCTC	3 cut(s)	743, 1212, 1472
BfaI	CTAG	4 cut(s)	53, 1463, 1491, 1496
BfmI	CTRYAG	2 cut(s)	777, 1230
BfrI	CTTAAG	1 cut(s)	1241
BfuI	GTATCC	1 cut(s)	381
BlnI	CCTAGG	1 cut(s)	1490
BmcAI	AGTACT	1 cut(s)	1157
Bme1390I	CCNGG	6 cut(s)	391, 443, 837, 861, 1916, 2124
Bme18I	GGWCC	4 cut(s)	335, 1786, 1949, 1957
BmgBI	CACGTC	1 cut(s)	2077
BmgT120I	GGNCC	6 cut(s)	335, 826, 827, 1786, 1949, 1957
BmiI	GGNNCC	5 cut(s)	828, 875, 1731, 1788, 1959
BmrFI	CCNGG	6 cut(s)	391, 443, 837, 861, 1916, 2124
BmsI	GCATC	5 cut(s)	156, 467, 507, 1457, 2024
BmtI	GCTAGC	1 cut(s)	56
BpiI	GAAGAC	3 cut(s)	998, 1135, 2079
BplI	GAGNNNNNCTC	2 cut(s)	1836, 1868
Bpu10I	CCTNAGC	2 cut(s)	279, 494
Bpu14I	TTCGAA	2 cut(s)	195, 690
BpuEI	CTTGAG	3 cut(s)	72, 683, 2195
BpuMI	CCSGG	2 cut(s)	391, 443
BsaBI	GATNNNNATC	2 cut(s)	1686, 1992
BsaHI	GRCGYC	1 cut(s)	2262
BsaJI	CCNNGG	7 cut(s)	442, 507, 822, 835, 1029, 1490, 2123
BsaWI	WCCGGW	1 cut(s)	2294
BsaXI	ACNNNNNCTCC	2 cut(s)	208, 238
Bsc4I	CCNNNNNNNGG	5 cut(s)	176, 280, 823, 836, 884
Bse118I	RCCGGY	1 cut(s)	849
Bse1I	ACTGG	5 cut(s)	242, 1731, 2106, 2239, 2265
Bse21I	CCTNAGG	1 cut(s)	558
Bse3DI	GCAATG	1 cut(s)	1017
Bse8I	GATNNNNATC	2 cut(s)	1686, 1992
BseBI	CCWGG	4 cut(s)	837, 861, 1916, 2124
BseDI	CCNNGG	7 cut(s)	442, 507, 822, 835, 1029, 1490, 2123
BseGI	GGATG	4 cut(s)	482, 1472, 1687, 1993
BseJI	GATNNNNATC	2 cut(s)	1686, 1992
BseLI	CCNNNNNNNGG	5 cut(s)	176, 280, 823, 836, 884
BseMI	GCAATG	1 cut(s)	1017
BseMII	CTCAG	6 cut(s)	268, 270, 290, 348, 508, 549
BseNI	ACTGG	5 cut(s)	242, 1731, 2106, 2239, 2265
BseRI	GAGGAG	1 cut(s)	2137
BseSI	GKGCMC	1 cut(s)	830
BseXI	GCAGC	9 cut(s)	25, 47, 68, 71, 261, 407, 645, 1446, 1585
BsgI	GTGCAG	2 cut(s)	1784, 2271
BshFI	GGCC	5 cut(s)	797, 828, 1697, 1919, 2018
BsiHKAI	GWGCWC	1 cut(s)	699
BsiSI	CCGG	4 cut(s)	390, 442, 850, 2295
BslFI	GGGAC	3 cut(s)	192, 576, 1011
BslI	CCNNNNNNNGG	5 cut(s)	176, 280, 823, 836, 884
BsmAI	GTCTC	3 cut(s)	743, 1212, 1472
BsmFI	GGGAC	3 cut(s)	192, 576, 1011
BsmI	GAATGC	1 cut(s)	107
BsnI	GGCC	5 cut(s)	797, 828, 1697, 1919, 2018
Bsp119I	TTCGAA	2 cut(s)	195, 690
Bsp120I	GGGCCC	1 cut(s)	826
Bsp1286I	GDGCHC	2 cut(s)	699, 830
Bsp143I	GATC	4 cut(s)	723, 1399, 1531, 2001
Bsp19I	CCATGG	1 cut(s)	507
BspACI	CCGC	9 cut(s)	62, 83, 112, 712, 1173, 1589, 1632, 1952, 2167
BspANI	GGCC	5 cut(s)	797, 828, 1697, 1919, 2018
BspCNI	CTCAG	6 cut(s)	267, 271, 291, 349, 507, 550
BspHI	TCATGA	1 cut(s)	468
BspLI	GGNNCC	5 cut(s)	828, 875, 1731, 1788, 1959
BspMAI	CTGCAG	1 cut(s)	1234
BspOI	GCTAGC	1 cut(s)	56
BspQI	GCTCTTC	1 cut(s)	687
BspT104I	TTCGAA	2 cut(s)	195, 690
BspTI	CTTAAG	1 cut(s)	1241
BsrBI	CCGCTC	2 cut(s)	712, 2169
BsrDI	GCAATG	1 cut(s)	1017
BsrFI	RCCGGY	1 cut(s)	849
BsrI	ACTGG	5 cut(s)	242, 1731, 2106, 2239, 2265
BssAI	RCCGGY	1 cut(s)	849
BssECI	CCNNGG	7 cut(s)	442, 507, 822, 835, 1029, 1490, 2123
BssMI	GATC	4 cut(s)	723, 1399, 1531, 2001
BssNI	GRCGYC	1 cut(s)	2262
BssSI	CACGAG	1 cut(s)	1853
BssT1I	CCWWGG	2 cut(s)	507, 1490
Bst2BI	CACGAG	1 cut(s)	1853
Bst2UI	CCWGG	4 cut(s)	837, 861, 1916, 2124
Bst4CI	ACNGT	4 cut(s)	677, 1134, 1216, 1677
Bst6I	CTCTTC	4 cut(s)	687, 1324, 2075, 2155
BstACI	GRCGYC	1 cut(s)	2262
BstAFI	CTTAAG	1 cut(s)	1241
BstAPI	GCANNNNNTGC	1 cut(s)	1598
BstBI	TTCGAA	2 cut(s)	195, 690
BstC8I	GCNNGC	5 cut(s)	54, 523, 790, 1175, 2025
BstDEI	CTNAG	6 cut(s)	254, 279, 299, 357, 494, 558
BstDSI	CCRYGG	2 cut(s)	507, 1029
BstEII	GGTNACC	1 cut(s)	119
BstENI	CCTNNNNNAGG	1 cut(s)	278
BstF5I	GGATG	4 cut(s)	482, 1472, 1687, 1993
BstHHI	GCGC	1 cut(s)	396
BstKTI	GATC	4 cut(s)	726, 1402, 1534, 2004
BstMAI	GTCTC	3 cut(s)	743, 1212, 1472
BstMBI	GATC	4 cut(s)	723, 1399, 1531, 2001
BstMWI	GCNNNNNNNGC	9 cut(s)	62, 111, 794, 861, 1595, 1598, 1604, 2024, 2244
BstNI	CCWGG	4 cut(s)	837, 861, 1916, 2124
BstNSI	RCATGY	4 cut(s)	484, 756, 792, 1451
BstPI	GGTNACC	1 cut(s)	119
BstSCI	CCNGG	6 cut(s)	389, 441, 835, 859, 1914, 2122
BstSFI	CTRYAG	2 cut(s)	777, 1230
BstSLI	GKGCMC	1 cut(s)	830
BstV1I	GCAGC	9 cut(s)	25, 47, 68, 71, 261, 407, 645, 1446, 1585
BstV2I	GAAGAC	3 cut(s)	998, 1135, 2079
Bsu36I	CCTNAGG	1 cut(s)	558
BsuI	GTATCC	1 cut(s)	381
BsuRI	GGCC	5 cut(s)	797, 828, 1697, 1919, 2018
BtgI	CCRYGG	2 cut(s)	507, 1029
BtgZI	GCGATG	1 cut(s)	2235
BtrI	CACGTC	1 cut(s)	2077
BtsCI	GGATG	4 cut(s)	482, 1472, 1687, 1993
BtsI	GCAGTG	2 cut(s)	1041, 2254
BtsIMutI	CAGTG	4 cut(s)	170, 1041, 1139, 2254
Cac8I	GCNNGC	5 cut(s)	54, 523, 790, 1175, 2025
CciI	TCATGA	1 cut(s)	468
CfoI	GCGC	1 cut(s)	396
Cfr10I	RCCGGY	1 cut(s)	849
Cfr13I	GGNCC	6 cut(s)	335, 826, 827, 1786, 1949, 1957
CseI	GACGC	3 cut(s)	250, 2198, 2270
Csp6I	GTAC	5 cut(s)	678, 1156, 1316, 1770, 2298
CviQI	GTAC	5 cut(s)	678, 1156, 1316, 1770, 2298
DdeI	CTNAG	6 cut(s)	254, 279, 299, 357, 494, 558
DpnI	GATC	4 cut(s)	725, 1401, 1533, 2003
DpnII	GATC	4 cut(s)	723, 1399, 1531, 2001
EaeI	YGGCCR	3 cut(s)	1695, 1917, 2016
Eam1104I	CTCTTC	4 cut(s)	687, 1324, 2075, 2155
EarI	CTCTTC	4 cut(s)	687, 1324, 2075, 2155
Ecl136II	GAGCTC	1 cut(s)	697
Eco130I	CCWWGG	2 cut(s)	507, 1490
Eco24I	GRGCYC	2 cut(s)	699, 830
Eco47I	GGWCC	4 cut(s)	335, 1786, 1949, 1957
Eco53kI	GAGCTC	1 cut(s)	697
Eco57I	CTGAAG	3 cut(s)	194, 992, 1784
Eco81I	CCTNAGG	1 cut(s)	558
Eco91I	GGTNACC	1 cut(s)	119
EcoICRI	GAGCTC	1 cut(s)	697
EcoNI	CCTNNNNNAGG	1 cut(s)	278
EcoO109I	RGGNCCY	1 cut(s)	826
EcoO65I	GGTNACC	1 cut(s)	119
EcoRI	GAATTC	2 cut(s)	352, 1118
EcoRII	CCWGG	4 cut(s)	835, 859, 1914, 2122
EcoT14I	CCWWGG	2 cut(s)	507, 1490
EcoT22I	ATGCAT	2 cut(s)	482, 790
EcoT38I	GRGCYC	2 cut(s)	699, 830
ErhI	CCWWGG	2 cut(s)	507, 1490
FalI	AAGNNNNNCTT	6 cut(s)	955, 987, 1194, 1226, 1734, 1766
FaqI	GGGAC	3 cut(s)	192, 576, 1011
FauI	CCCGC	1 cut(s)	1166
FauNDI	CATATG	1 cut(s)	1067
FbaI	TGATCA	2 cut(s)	1399, 1531
FblI	GTMKAC	1 cut(s)	1305
FokI	GGATG	4 cut(s)	489, 1479, 1694, 2000
FriOI	GRGCYC	2 cut(s)	699, 830
FspBI	CTAG	4 cut(s)	53, 1463, 1491, 1496
GlaI	GCGC	1 cut(s)	395
HaeIII	GGCC	5 cut(s)	797, 828, 1697, 1919, 2018
HapII	CCGG	4 cut(s)	390, 442, 850, 2295
HgaI	GACGC	3 cut(s)	250, 2198, 2270
HhaI	GCGC	1 cut(s)	396
Hin1I	GRCGYC	1 cut(s)	2262
Hin6I	GCGC	1 cut(s)	394
HinP1I	GCGC	1 cut(s)	394
HincII	GTYRAC	1 cut(s)	814
HindII	GTYRAC	1 cut(s)	814
HindIII	AAGCTT	1 cut(s)	2135
HinfI	GANTC	6 cut(s)	212, 1205, 1434, 1687, 1911, 2177
HpaII	CCGG	4 cut(s)	390, 442, 850, 2295
HphI	GGTGA	7 cut(s)	164, 361, 467, 945, 1295, 1465, 1621
Hpy166II	GTNNAC	4 cut(s)	458, 814, 1306, 1501
Hpy188I	TCNGA	8 cut(s)	300, 358, 1011, 1363, 1390, 1708, 1715, 2188
Hpy8I	GTNNAC	4 cut(s)	458, 814, 1306, 1501
Hpy99I	CGWCG	1 cut(s)	1394
HpyAV	CCTTC	7 cut(s)	169, 650, 652, 863, 1240, 1280, 2210
HpyCH4III	ACNGT	4 cut(s)	677, 1134, 1216, 1677
HpyCH4IV	ACGT	4 cut(s)	941, 1830, 1923, 2076
HpyF10VI	GCNNNNNNNGC	9 cut(s)	62, 111, 794, 861, 1595, 1598, 1604, 2024, 2244
HpyF3I	CTNAG	6 cut(s)	254, 279, 299, 357, 494, 558
HpySE526I	ACGT	4 cut(s)	941, 1830, 1923, 2076
Hsp92I	GRCGYC	1 cut(s)	2262
HspAI	GCGC	1 cut(s)	394
Ksp22I	TGATCA	2 cut(s)	1399, 1531
Kzo9I	GATC	4 cut(s)	723, 1399, 1531, 2001
LguI	GCTCTTC	1 cut(s)	687
LmnI	GCTCC	2 cut(s)	1715, 1858
Lsp1109I	GCAGC	9 cut(s)	25, 47, 68, 71, 261, 407, 645, 1446, 1585
LweI	GCATC	5 cut(s)	156, 467, 507, 1457, 2024
MaeI	CTAG	4 cut(s)	53, 1463, 1491, 1496
MaeII	ACGT	4 cut(s)	941, 1830, 1923, 2076
MaeIII	GTNAC	9 cut(s)	119, 152, 161, 320, 361, 839, 965, 1826, 2178
MalI	GATC	4 cut(s)	725, 1401, 1533, 2003
MbiI	CCGCTC	2 cut(s)	712, 2169
MboI	GATC	4 cut(s)	723, 1399, 1531, 2001
MfeI	CAATTG	1 cut(s)	1187
MhlI	GDGCHC	2 cut(s)	699, 830
MlsI	TGGCCA	2 cut(s)	1919, 2018
MluNI	TGGCCA	2 cut(s)	1919, 2018
MlyI	GAGTC	2 cut(s)	1214, 2186
MmeI	TCCRAC	5 cut(s)	270, 284, 1413, 1659, 1686
Mox20I	TGGCCA	2 cut(s)	1919, 2018
Mph1103I	ATGCAT	2 cut(s)	482, 790
MroXI	GAANNNNTTC	1 cut(s)	1797
MscI	TGGCCA	2 cut(s)	1919, 2018
MseI	TTAA	5 cut(s)	624, 729, 1242, 1406, 1410
MslI	CAYNNNNRTG	4 cut(s)	485, 1446, 1634, 1653
Msp20I	TGGCCA	2 cut(s)	1919, 2018
MspA1I	CMGCKG	4 cut(s)	38, 62, 114, 1954
MspCI	CTTAAG	1 cut(s)	1241
MspI	CCGG	4 cut(s)	390, 442, 850, 2295
MspR9I	CCNGG	6 cut(s)	391, 443, 837, 861, 1916, 2124
MunI	CAATTG	1 cut(s)	1187
Mva1269I	GAATGC	1 cut(s)	107
MvaI	CCWGG	4 cut(s)	837, 861, 1916, 2124
MwoI	GCNNNNNNNGC	9 cut(s)	62, 111, 794, 861, 1595, 1598, 1604, 2024, 2244
NciI	CCSGG	2 cut(s)	391, 443
NcoI	CCATGG	1 cut(s)	507
NdeI	CATATG	1 cut(s)	1067
NdeII	GATC	4 cut(s)	723, 1399, 1531, 2001
NheI	GCTAGC	1 cut(s)	52
NlaIV	GGNNCC	5 cut(s)	828, 875, 1731, 1788, 1959
NmuCI	GTSAC	4 cut(s)	152, 361, 1826, 2178
NsiI	ATGCAT	2 cut(s)	482, 790
NspI	RCATGY	4 cut(s)	484, 756, 792, 1451
NspV	TTCGAA	2 cut(s)	195, 690
PacI	TTAATTAA	1 cut(s)	1410
PaeI	GCATGC	1 cut(s)	792
PagI	TCATGA	1 cut(s)	468
PciI	ACATGT	1 cut(s)	1447
PciSI	GCTCTTC	1 cut(s)	687
PctI	GAATGC	1 cut(s)	107
PdmI	GAANNNNTTC	1 cut(s)	1797
PfeI	GAWTC	4 cut(s)	212, 1434, 1687, 1911
PflMI	CCANNNNNTGG	1 cut(s)	836
PleI	GAGTC	2 cut(s)	1213, 2185
PpsI	GAGTC	2 cut(s)	1213, 2185
PscI	ACATGT	1 cut(s)	1447
PshBI	ATTAAT	2 cut(s)	1406, 1410
PsiI	TTATAA	1 cut(s)	516
Psp124BI	GAGCTC	1 cut(s)	699
Psp6I	CCWGG	4 cut(s)	835, 859, 1914, 2122
PspEI	GGTNACC	1 cut(s)	119
PspGI	CCWGG	4 cut(s)	835, 859, 1914, 2122
PspN4I	GGNNCC	5 cut(s)	828, 875, 1731, 1788, 1959
PspOMI	GGGCCC	1 cut(s)	826
PspPI	GGNCC	6 cut(s)	335, 826, 827, 1786, 1949, 1957
PstI	CTGCAG	1 cut(s)	1234
PvuII	CAGCTG	1 cut(s)	38
RsaI	GTAC	5 cut(s)	679, 1157, 1317, 1771, 2299
RsaNI	GTAC	5 cut(s)	678, 1156, 1316, 1770, 2298
RseI	CAYNNNNRTG	4 cut(s)	485, 1446, 1634, 1653
SacI	GAGCTC	1 cut(s)	699
SapI	GCTCTTC	1 cut(s)	687
SaqAI	TTAA	5 cut(s)	624, 729, 1242, 1406, 1410
Sau3AI	GATC	4 cut(s)	723, 1399, 1531, 2001
Sau96I	GGNCC	6 cut(s)	335, 826, 827, 1786, 1949, 1957
ScaI	AGTACT	1 cut(s)	1157
SchI	GAGTC	2 cut(s)	1214, 2186
ScrFI	CCNGG	6 cut(s)	391, 443, 837, 861, 1916, 2124
SduI	GDGCHC	2 cut(s)	699, 830
SfaNI	GCATC	5 cut(s)	156, 467, 507, 1457, 2024
SfcI	CTRYAG	2 cut(s)	777, 1230
SfuI	TTCGAA	2 cut(s)	195, 690
SinI	GGWCC	4 cut(s)	335, 1786, 1949, 1957
SmiMI	CAYNNNNRTG	4 cut(s)	485, 1446, 1634, 1653
SmlI	CTYRAG	4 cut(s)	87, 698, 1241, 2174
SmoI	CTYRAG	4 cut(s)	87, 698, 1241, 2174
SphI	GCATGC	1 cut(s)	792
SsiI	CCGC	9 cut(s)	62, 83, 112, 712, 1173, 1589, 1632, 1952, 2167
SspMI	CTAG	4 cut(s)	53, 1463, 1491, 1496
SstI	GAGCTC	1 cut(s)	699
StyD4I	CCNGG	6 cut(s)	389, 441, 835, 859, 1914, 2122
StyI	CCWWGG	2 cut(s)	507, 1490
TaaI	ACNGT	4 cut(s)	677, 1134, 1216, 1677
TaiI	ACGT	4 cut(s)	944, 1833, 1926, 2079
TaqI	TCGA	8 cut(s)	195, 690, 892, 1320, 1432, 1651, 1983, 2308
TaqII	GACCGA	2 cut(s)	323, 836
TatI	WGTACW	1 cut(s)	1155
TauI	GCSGC	2 cut(s)	65, 1592
TfiI	GAWTC	4 cut(s)	212, 1434, 1687, 1911
Tru1I	TTAA	5 cut(s)	624, 729, 1242, 1406, 1410
Tru9I	TTAA	5 cut(s)	624, 729, 1242, 1406, 1410
TscAI	CASTG	4 cut(s)	177, 1048, 1139, 2254
TseFI	GTSAC	4 cut(s)	152, 361, 1826, 2178
TseI	GCWGC	9 cut(s)	35, 38, 56, 59, 249, 420, 633, 1459, 1598
Tsp45I	GTSAC	4 cut(s)	152, 361, 1826, 2178
TspGWI	ACGGA	1 cut(s)	475
TspRI	CASTG	4 cut(s)	177, 1048, 1139, 2254
Van91I	CCANNNNNTGG	1 cut(s)	836
Vha464I	CTTAAG	1 cut(s)	1241
VpaK11BI	GGWCC	4 cut(s)	335, 1786, 1949, 1957
VspI	ATTAAT	2 cut(s)	1406, 1410
XagI	CCTNNNNNAGG	1 cut(s)	278
XapI	RAATTY	6 cut(s)	352, 619, 949, 1052, 1118, 1356
XceI	RCATGY	4 cut(s)	484, 756, 792, 1451
XcmI	CCANNNNNNNNNTGG	1 cut(s)	234
XmaJI	CCTAGG	1 cut(s)	1490
XmiI	GTMKAC	1 cut(s)	1305
XmnI	GAANNNNTTC	1 cut(s)	1797
XspI	CTAG	4 cut(s)	53, 1463, 1491, 1496
ZrmI	AGTACT	1 cut(s)	1157
Zsp2I	ATGCAT	2 cut(s)	482, 790

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.