Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001423.1

Orthogroup ID

OG0004224

Physical Location & Seq

Genomic Coordinates Forward (+)

203613 .. 208545

Gene Structure 4933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001423.1_g000044.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

atgcttcttatgaaactctcacttttcttattagccgctgcaacgatattactagcagcagcagctgataaacccctcccaccgcctcaagccaagcccaactgcacacaccgctgtggtaacctcacaattccatatccctttggcatcggtgacggctgttacatgccactgaagggattcaatctcagttgtgatgattccactatatccccatcattgaacttgtccaggaccatccgtgtcactgattttaatattgctgagggtgagttgcatattttgaattttataagcaaggattgttatgacaagagcggcttgaattcgcagaacaccattcctacgctcggtttgggtcctcctttcagcatttccggtctcaaaaacaggttcgtcgccataggctgcgacacttttgctgttttcaagggttttcgtggcgcacaaccgttcatgacggggtgcctgtccgtgtgcctcaacattaacaccgtggatgaaacctcttgctctggtgccgggtgttgccagaccacaatccctgaaggactgacaaatcgtactttgacattgggtagcttttccaatcacacgaatatatgggaatttaatccctgcagctatgccttccttgtgcaagatggctactttaacttcagcggtacgaagagtttcgaagagctcaagaacagaaagaagatgccaatgatcgttaattggcagattggaaatgagccatgcgaggtagctaaaaagaatgctgaggattatgcatgcaagggaaattccacgtgtgccaaccggaccaagagcccataccctggttactattgccagtgcttgccaggctacgaagggaacccatacctcggttgccaagatattaacgagtgtttggctgaaattaaacgatgtgggaacggaacgtgccaaaatacacctggaaattacacttgtaaatgtaatgaaggattcgaaaatgatggtcaatggaagtgcattgctcgtcccaagggaaacaacacccccctgaaaatttcattgggtatttgtataggcttctgtattcttttggtcataatttttgggttatatcgcgaatacaagagaatacagttctacagattgaaaacaaagtactttgaagcaaatggcgggccaaaaatagaagctcacttcgaacaattgatgaagcaattggctagtcagaaagaacctagtcaaaaagaacctcttgggccccaaatctttactacagaacaacttaagatggcaacgaaggattacgatgaaaagcaaaaaattggcgaaggaggctatggagaagtttacaaaggcgtactcgatgataaaagagtggttgcaataaagaagtccaaaacgactgcccaggtcgaacgtgatcaatttgttactgagatcattgttctttctgatattagtcatgaaaatgtggtgaggctgctaggctgttgcgtggacacaaaaacgcctgtgctagtttacgagtttgttgataatggaactctttatgatcacattcataaaaaggaagaaaaggaattacaaccactttcatttgcacaacgattgaagatagcaacacaaactgcgacagcactttcatacttacataactccaagcaaattgttcatcgagatgtcaagttaacgaatatacttttggataagaatcttatggccaaagtgtcagactttggagcttcaaaactggttcctgacaacaaagctcaacttccaactttggtgcagggtacaatgggatacttggaccctgaatatcttcagtcccacaaactaacaaacaagagtgacgtttatagctttggagttgtcctcgttgagctactaacaagccagaatgcaattcgtttcgatacagaccaggagaagagaatcctagccaaagtattcgtttctacaattgaaaatacaggtcaacttaatcaaattcttgatggtgaaatagtcaaggatggaaattgggagatgatcgaaaaagttgctaagctcgccgaaagatgcttaagggttaaaggagtcgaaaggcctaccatggaagaagtagagagggagctaaatgaaatactgaaaacttcaaaaaagcaacaagggggaaagaagctttatgcctcctcttccaaagagacagacccctctcgtgagtcacattcaaacacttacaatgtggagattagtgatgaaggcgatgatggctctactggcattgctaccagtgcagagtattacgccagcatgcaatatcaagcccaaaagccgtccggttatggtcgataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK cEGF

Protein Analysis

773

Amino Acids

85.96

Weight (kDa)

7.6

Isoelectric Point (pI)

32.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004224)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g10610
malus_domestica	MD05G1270300.v1.1 MD05G1270700.v1.1
rosa_chinensis	RchiOBHm_Chr1g0329511 RchiOBHm_Chr1g0336171 RchiOBHm_Chr5g0016711 RchiOBHm_Chr5g0016781 RchiOBHm_Chr5g0016821 RchiOBHm_Chr5g0017081 RchiOBHm_Chr5g0017111 RchiOBHm_Chr5g0017281 RchiOBHm_Chr5g0017311 RchiOBHm_Chr5g0054731
rosa_laevigata	RLG00000002400 RLG00000023080 RLG00000029879 RLG00000029880
rosa_multiflora	Rmu_sc0000441.1_g000086 Rmu_sc0001235.1_g000006 Rmu_sc0001423.1_g000044 Rmu_sc0003630.1_g000003 Rmu_sc0003801.1_g000025 Rmu_sc0005319.1_g000021 Rmu_sc0005418.1_g000011 Rmu_sc0008053.1_g000024
rosa_roxburghii	Rroxscaffold_1G00012580 Rroxscaffold_1G00013300 Rroxscaffold_4G00321010 Rroxscaffold_6G00395830 Rroxscaffold_6G00395840
rosa_rugosa	Rorug03G0224700
rosa_wichuraiana	Rw3G024380 Rw3G024480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	293
AccB1I	GGYRCC	2 cut(s)	465, 518
AccB7I	CCANNNNNTGG	1 cut(s)	824
AccBSI	CCGCTC	1 cut(s)	318
AccII	CGCG	1 cut(s)	1101
AciI	CCGC	6 cut(s)	36, 83, 112, 318, 663, 1158
AcoI	YGGCCR	1 cut(s)	1704
AcsI	RAATTY	6 cut(s)	286, 325, 608, 787, 1038, 1974
AcuI	CTGAAG	4 cut(s)	194, 567, 643, 1793
AcvI	CACGTG	1 cut(s)	795
AfaI	GTAC	5 cut(s)	565, 667, 1142, 1344, 1780
AfiI	CCNNNNNNNGG	4 cut(s)	176, 350, 824, 872
AflII	CTTAAG	2 cut(s)	1268, 2050
AflIII	ACRYGT	1 cut(s)	794
AjnI	CCWGG	6 cut(s)	230, 823, 847, 943, 1392, 1908
AjuI	GAANNNNNNNTTGG	4 cut(s)	1028, 1060, 1670, 1702
AleI	CACNNNNGTG	1 cut(s)	114
Alw21I	GWGCWC	1 cut(s)	687
Alw26I	GTCTC	2 cut(s)	386, 2165
AlwNI	CAGNNNCTG	1 cut(s)	65
AoxI	GGCC	4 cut(s)	1160, 1241, 1704, 2072
ApaI	GGGCCC	1 cut(s)	1245
ApeKI	GCWGC	7 cut(s)	38, 56, 59, 62, 408, 621, 1465
ApoI	RAATTY	6 cut(s)	286, 325, 608, 787, 1038, 1974
Asp700I	GAANNNNTTC	3 cut(s)	179, 674, 1806
AspLEI	GCGC	1 cut(s)	446
AspS9I	GGNCC	7 cut(s)	234, 359, 807, 1160, 1241, 1242, 1795
AsuC2I	CCSGG	1 cut(s)	523
AsuHPI	GGTGA	4 cut(s)	164, 281, 1471, 1997
AsuII	TTCGAA	3 cut(s)	678, 978, 1182
AvaII	GGWCC	4 cut(s)	234, 359, 807, 1795
BaeGI	GKGCMC	1 cut(s)	1245
BalI	TGGCCA	1 cut(s)	1706
BanI	GGYRCC	2 cut(s)	465, 518
BanII	GRGCYC	3 cut(s)	687, 818, 1245
BauI	CACGAG	1 cut(s)	2184
BbrPI	CACGTG	1 cut(s)	795
Bbv12I	GWGCWC	1 cut(s)	687
BbvCI	CCTCAGC	2 cut(s)	264, 765
BbvI	GCAGC	7 cut(s)	25, 68, 71, 74, 395, 633, 1452
BccI	CCATC	8 cut(s)	223, 245, 638, 980, 1267, 1976, 1994, 2231
BceAI	ACGGC	2 cut(s)	172, 2287
BcgI	CGANNNNNNTGC	4 cut(s)	401, 435, 2009, 2043
BciT130I	CCWGG	6 cut(s)	232, 825, 849, 945, 1394, 1910
BciVI	GTATCC	1 cut(s)	1781
BclI	TGATCA	2 cut(s)	1405, 1537
BcnI	CCSGG	1 cut(s)	523
BcoDI	GTCTC	2 cut(s)	386, 2165
BfaI	CTAG	6 cut(s)	53, 1206, 1221, 1469, 1502, 1925
BfmI	CTRYAG	3 cut(s)	619, 1123, 1257
BfrI	CTTAAG	2 cut(s)	1268, 2050
BfuI	GTATCC	1 cut(s)	1781
BisI	GCNGC	9 cut(s)	36, 39, 57, 60, 63, 319, 409, 622, 1466
BlpI	GCTNAGC	1 cut(s)	2031
BlsI	GCNGC	9 cut(s)	37, 40, 58, 61, 64, 320, 410, 623, 1467
BmcAI	AGTACT	1 cut(s)	1142
Bme1390I	CCNGG	7 cut(s)	232, 523, 825, 849, 945, 1394, 1910
Bme18I	GGWCC	4 cut(s)	234, 359, 807, 1795
BmgT120I	GGNCC	7 cut(s)	234, 359, 807, 1160, 1241, 1242, 1795
BmiI	GGNNCC	8 cut(s)	360, 467, 520, 863, 1243, 1244, 1740, 1797
BmrFI	CCNGG	7 cut(s)	232, 523, 825, 849, 945, 1394, 1910
BmsI	GCATC	3 cut(s)	156, 693, 2036
BplI	GAGNNNNNCTC	2 cut(s)	1845, 1877
Bpu10I	CCTNAGC	2 cut(s)	264, 765
Bpu1102I	GCTNAGC	1 cut(s)	2031
Bpu14I	TTCGAA	3 cut(s)	678, 978, 1182
BpuEI	CTTGAG	2 cut(s)	72, 671
BpuMI	CCSGG	1 cut(s)	523
BsaAI	YACGTR	1 cut(s)	795
BsaBI	GATNNNNATC	1 cut(s)	1695
BsaI	GGTCTC	1 cut(s)	386
BsaJI	CCNNGG	6 cut(s)	495, 823, 871, 1014, 1392, 2079
BsaWI	WCCGGW	3 cut(s)	377, 804, 2306
Bsc4I	CCNNNNNNNGG	4 cut(s)	176, 350, 824, 872
Bse1I	ACTGG	4 cut(s)	838, 1740, 2251, 2259
Bse3DI	GCAATG	2 cut(s)	1002, 2250
Bse8I	GATNNNNATC	1 cut(s)	1695
BseBI	CCWGG	6 cut(s)	232, 825, 849, 945, 1394, 1910
BseDI	CCNNGG	6 cut(s)	495, 823, 871, 1014, 1392, 2079
BseGI	GGATG	3 cut(s)	237, 505, 2005
BseJI	GATNNNNATC	1 cut(s)	1695
BseLI	CCNNNNNNNGG	4 cut(s)	176, 350, 824, 872
BseMI	GCAATG	2 cut(s)	1002, 2250
BseMII	CTCAG	4 cut(s)	202, 255, 756, 1410
BseNI	ACTGG	4 cut(s)	838, 1740, 2251, 2259
BseRI	GAGGAG	1 cut(s)	2149
BseSI	GKGCMC	1 cut(s)	1245
BseXI	GCAGC	7 cut(s)	25, 68, 71, 74, 395, 633, 1452
BsgI	GTGCAG	3 cut(s)	88, 1793, 2283
Bsh1236I	CGCG	1 cut(s)	1101
BshFI	GGCC	4 cut(s)	1162, 1243, 1706, 2074
BshNI	GGYRCC	2 cut(s)	465, 518
BsiHKAI	GWGCWC	1 cut(s)	687
BsiSI	CCGG	4 cut(s)	378, 522, 805, 2307
BslFI	GGGAC	2 cut(s)	996, 1798
BslI	CCNNNNNNNGG	4 cut(s)	176, 350, 824, 872
BsmAI	GTCTC	2 cut(s)	386, 2165
BsmFI	GGGAC	2 cut(s)	996, 1798
BsmI	GAATGC	2 cut(s)	766, 1891
BsnI	GGCC	4 cut(s)	1162, 1243, 1706, 2074
Bso31I	GGTCTC	1 cut(s)	386
Bsp119I	TTCGAA	3 cut(s)	678, 978, 1182
Bsp120I	GGGCCC	1 cut(s)	1241
Bsp1286I	GDGCHC	3 cut(s)	687, 818, 1245
Bsp143I	GATC	5 cut(s)	711, 1405, 1422, 1537, 2016
Bsp1720I	GCTNAGC	1 cut(s)	2031
Bsp19I	CCATGG	1 cut(s)	2079
Bsp68I	TCGCGA	1 cut(s)	1101
BspACI	CCGC	6 cut(s)	36, 83, 112, 318, 663, 1158
BspANI	GGCC	4 cut(s)	1162, 1243, 1706, 2074
BspCNI	CTCAG	4 cut(s)	201, 256, 757, 1411
BspFNI	CGCG	1 cut(s)	1101
BspHI	TCATGA	2 cut(s)	456, 1447
BspLI	GGNNCC	8 cut(s)	360, 467, 520, 863, 1243, 1244, 1740, 1797
BspMAI	CTGCAG	1 cut(s)	623
BspQI	GCTCTTC	1 cut(s)	675
BspT104I	TTCGAA	3 cut(s)	678, 978, 1182
BspT107I	GGYRCC	2 cut(s)	465, 518
BspTI	CTTAAG	2 cut(s)	1268, 2050
BspTNI	GGTCTC	1 cut(s)	386
BsrBI	CCGCTC	1 cut(s)	318
BsrDI	GCAATG	2 cut(s)	1002, 2250
BsrI	ACTGG	4 cut(s)	838, 1740, 2251, 2259
BssECI	CCNNGG	6 cut(s)	495, 823, 871, 1014, 1392, 2079
BssMI	GATC	5 cut(s)	711, 1405, 1422, 1537, 2016
BssSI	CACGAG	1 cut(s)	2184
BssT1I	CCWWGG	2 cut(s)	1014, 2079
Bst2BI	CACGAG	1 cut(s)	2184
Bst2UI	CCWGG	6 cut(s)	232, 825, 849, 945, 1394, 1910
Bst4CI	ACNGT	3 cut(s)	453, 496, 1119
Bst6I	CTCTTC	4 cut(s)	665, 675, 1910, 2167
BstAFI	CTTAAG	2 cut(s)	1268, 2050
BstBAI	YACGTR	1 cut(s)	795
BstBI	TTCGAA	3 cut(s)	678, 978, 1182
BstC8I	GCNNGC	6 cut(s)	778, 845, 1160, 2037, 2278, 2282
BstDEI	CTNAG	5 cut(s)	188, 264, 765, 1419, 2031
BstDSI	CCRYGG	2 cut(s)	495, 2079
BstEII	GGTNACC	1 cut(s)	119
BstF5I	GGATG	3 cut(s)	237, 505, 2005
BstFNI	CGCG	1 cut(s)	1101
BstHHI	GCGC	1 cut(s)	446
BstKTI	GATC	5 cut(s)	714, 1408, 1425, 1540, 2019
BstMAI	GTCTC	2 cut(s)	386, 2165
BstMBI	GATC	5 cut(s)	711, 1405, 1422, 1537, 2016
BstMWI	GCNNNNNNNGC	8 cut(s)	62, 111, 849, 1317, 2036, 2238, 2247, 2261
BstNI	CCWGG	6 cut(s)	232, 825, 849, 945, 1394, 1910
BstNSI	RCATGY	3 cut(s)	169, 780, 2284
BstPI	GGTNACC	1 cut(s)	119
BstSCI	CCNGG	7 cut(s)	230, 521, 823, 847, 943, 1392, 1908
BstSFI	CTRYAG	3 cut(s)	619, 1123, 1257
BstSLI	GKGCMC	1 cut(s)	1245
BstUI	CGCG	1 cut(s)	1101
BstV1I	GCAGC	7 cut(s)	25, 68, 71, 74, 395, 633, 1452
BsuI	GTATCC	1 cut(s)	1781
BsuRI	GGCC	4 cut(s)	1162, 1243, 1706, 2074
BtgI	CCRYGG	2 cut(s)	495, 2079
BtgZI	GCGATG	1 cut(s)	2247
BtsCI	GGATG	3 cut(s)	237, 505, 2005
BtsIMutI	CAGTG	4 cut(s)	170, 246, 845, 2266
BtuMI	TCGCGA	1 cut(s)	1101
Cac8I	GCNNGC	6 cut(s)	778, 845, 1160, 2037, 2278, 2282
CaiI	CAGNNNCTG	1 cut(s)	65
CciI	TCATGA	2 cut(s)	456, 1447
CfoI	GCGC	1 cut(s)	446
Cfr13I	GGNCC	7 cut(s)	234, 359, 807, 1160, 1241, 1242, 1795
Csp6I	GTAC	5 cut(s)	564, 666, 1141, 1343, 1779
CviAII	CATG	7 cut(s)	166, 457, 741, 777, 1448, 2080, 2281
CviQI	GTAC	5 cut(s)	564, 666, 1141, 1343, 1779
DdeI	CTNAG	5 cut(s)	188, 264, 765, 1419, 2031
DpnI	GATC	5 cut(s)	713, 1407, 1424, 1539, 2018
DpnII	GATC	5 cut(s)	711, 1405, 1422, 1537, 2016
EaeI	YGGCCR	1 cut(s)	1704
Eam1104I	CTCTTC	4 cut(s)	665, 675, 1910, 2167
EarI	CTCTTC	4 cut(s)	665, 675, 1910, 2167
Ecl136II	GAGCTC	1 cut(s)	685
Eco130I	CCWWGG	2 cut(s)	1014, 2079
Eco147I	AGGCCT	1 cut(s)	2074
Eco24I	GRGCYC	3 cut(s)	687, 818, 1245
Eco31I	GGTCTC	1 cut(s)	386
Eco47I	GGWCC	4 cut(s)	234, 359, 807, 1795
Eco53kI	GAGCTC	1 cut(s)	685
Eco57I	CTGAAG	4 cut(s)	194, 567, 643, 1793
Eco72I	CACGTG	1 cut(s)	795
Eco91I	GGTNACC	1 cut(s)	119
EcoICRI	GAGCTC	1 cut(s)	685
EcoO109I	RGGNCCY	2 cut(s)	359, 1242
EcoO65I	GGTNACC	1 cut(s)	119
EcoRI	GAATTC	1 cut(s)	325
EcoRII	CCWGG	6 cut(s)	230, 823, 847, 943, 1392, 1908
EcoT14I	CCWWGG	2 cut(s)	1014, 2079
EcoT22I	ATGCAT	1 cut(s)	778
EcoT38I	GRGCYC	3 cut(s)	687, 818, 1245
ErhI	CCWWGG	2 cut(s)	1014, 2079
FaeI	CATG	7 cut(s)	169, 460, 744, 780, 1451, 2083, 2284
FalI	AAGNNNNNCTT	6 cut(s)	305, 337, 1221, 1253, 1743, 1775
FaqI	GGGAC	2 cut(s)	996, 1798
FatI	CATG	7 cut(s)	165, 456, 740, 776, 1447, 2079, 2280
FauI	CCCGC	1 cut(s)	1151
FbaI	TGATCA	2 cut(s)	1405, 1537
Fnu4HI	GCNGC	9 cut(s)	36, 39, 57, 60, 63, 319, 409, 622, 1466
FokI	GGATG	3 cut(s)	224, 512, 2012
FriOI	GRGCYC	3 cut(s)	687, 818, 1245
Fsp4HI	GCNGC	9 cut(s)	36, 39, 57, 60, 63, 319, 409, 622, 1466
FspBI	CTAG	6 cut(s)	53, 1206, 1221, 1469, 1502, 1925
GlaI	GCGC	1 cut(s)	445
GluI	GCNGC	9 cut(s)	36, 39, 57, 60, 63, 319, 409, 622, 1466
HaeIII	GGCC	4 cut(s)	1162, 1243, 1706, 2074
HapII	CCGG	4 cut(s)	378, 522, 805, 2307
HhaI	GCGC	1 cut(s)	446
Hin1II	CATG	7 cut(s)	169, 460, 744, 780, 1451, 2083, 2284
Hin6I	GCGC	1 cut(s)	444
HinP1I	GCGC	1 cut(s)	444
HincII	GTYRAC	2 cut(s)	1674, 1964
HindII	GTYRAC	2 cut(s)	1674, 1964
HindIII	AAGCTT	1 cut(s)	2147
HinfI	GANTC	7 cut(s)	180, 200, 975, 1696, 1920, 2064, 2189
HpaI	GTTAAC	1 cut(s)	1674
HpaII	CCGG	4 cut(s)	378, 522, 805, 2307
HphI	GGTGA	4 cut(s)	164, 281, 1471, 1997
Hpy166II	GTNNAC	5 cut(s)	1333, 1483, 1507, 1674, 1964
Hpy188I	TCNGA	3 cut(s)	1212, 1438, 1717
Hpy188III	TCNNGA	8 cut(s)	457, 688, 1100, 1448, 1661, 1742, 1979, 2186
Hpy8I	GTNNAC	5 cut(s)	1333, 1483, 1507, 1674, 1964
Hpy99I	CGWCG	1 cut(s)	401
HpyAV	CCTTC	8 cut(s)	169, 542, 640, 851, 965, 1276, 1307, 2222
HpyCH4III	ACNGT	3 cut(s)	453, 496, 1119
HpyCH4IV	ACGT	4 cut(s)	794, 929, 1402, 1839
HpyF10VI	GCNNNNNNNGC	8 cut(s)	62, 111, 849, 1317, 2036, 2238, 2247, 2261
HpyF3I	CTNAG	5 cut(s)	188, 264, 765, 1419, 2031
HpySE526I	ACGT	4 cut(s)	794, 929, 1402, 1839
Hsp92II	CATG	7 cut(s)	169, 460, 744, 780, 1451, 2083, 2284
HspAI	GCGC	1 cut(s)	444
Ksp22I	TGATCA	2 cut(s)	1405, 1537
KspAI	GTTAAC	1 cut(s)	1674
Kzo9I	GATC	5 cut(s)	711, 1405, 1422, 1537, 2016
LguI	GCTCTTC	1 cut(s)	675
LmnI	GCTCC	2 cut(s)	1724, 2098
Lsp1109I	GCAGC	7 cut(s)	25, 68, 71, 74, 395, 633, 1452
LweI	GCATC	3 cut(s)	156, 693, 2036
MaeI	CTAG	6 cut(s)	53, 1206, 1221, 1469, 1502, 1925
MaeII	ACGT	4 cut(s)	794, 929, 1402, 1839
MaeIII	GTNAC	8 cut(s)	119, 152, 161, 244, 827, 1414, 1835, 2190
MalI	GATC	5 cut(s)	713, 1407, 1424, 1539, 2018
MbiI	CCGCTC	1 cut(s)	318
MboI	GATC	5 cut(s)	711, 1405, 1422, 1537, 2016
MboII	GAAGA	9 cut(s)	682, 692, 712, 1568, 1609, 1799, 1927, 2096, 2154
MfeI	CAATTG	3 cut(s)	1187, 1199, 1947
MhlI	GDGCHC	3 cut(s)	687, 818, 1245
MlsI	TGGCCA	1 cut(s)	1706
MluNI	TGGCCA	1 cut(s)	1706
MlyI	GAGTC	2 cut(s)	2073, 2198
MmeI	TCCRAC	1 cut(s)	1787
Mox20I	TGGCCA	1 cut(s)	1706
Mph1103I	ATGCAT	1 cut(s)	778
MroXI	GAANNNNTTC	3 cut(s)	179, 674, 1806
MscI	TGGCCA	1 cut(s)	1706
MslI	CAYNNNNRTG	3 cut(s)	114, 1452, 1662
Msp20I	TGGCCA	1 cut(s)	1706
MspA1I	CMGCKG	4 cut(s)	38, 65, 114, 663
MspCI	CTTAAG	2 cut(s)	1268, 2050
MspI	CCGG	4 cut(s)	378, 522, 805, 2307
MspR9I	CCNGG	7 cut(s)	232, 523, 825, 849, 945, 1394, 1910
MunI	CAATTG	3 cut(s)	1187, 1199, 1947
Mva1269I	GAATGC	2 cut(s)	766, 1891
MvaI	CCWGG	6 cut(s)	232, 825, 849, 945, 1394, 1910
MvnI	CGCG	1 cut(s)	1101
MwoI	GCNNNNNNNGC	8 cut(s)	62, 111, 849, 1317, 2036, 2238, 2247, 2261
NciI	CCSGG	1 cut(s)	523
NcoI	CCATGG	1 cut(s)	2079
NdeII	GATC	5 cut(s)	711, 1405, 1422, 1537, 2016
NlaIII	CATG	7 cut(s)	169, 460, 744, 780, 1451, 2083, 2284
NlaIV	GGNNCC	8 cut(s)	360, 467, 520, 863, 1243, 1244, 1740, 1797
NmuCI	GTSAC	4 cut(s)	152, 244, 1835, 2190
NruI	TCGCGA	1 cut(s)	1101
NsiI	ATGCAT	1 cut(s)	778
NspI	RCATGY	3 cut(s)	169, 780, 2284
NspV	TTCGAA	3 cut(s)	678, 978, 1182
OliI	CACNNNNGTG	1 cut(s)	114
PaeI	GCATGC	2 cut(s)	780, 2284
PagI	TCATGA	2 cut(s)	456, 1447
PceI	AGGCCT	1 cut(s)	2074
PciSI	GCTCTTC	1 cut(s)	675
PctI	GAATGC	2 cut(s)	766, 1891
PdmI	GAANNNNTTC	3 cut(s)	179, 674, 1806
PfeI	GAWTC	5 cut(s)	180, 200, 975, 1696, 1920
PflMI	CCANNNNNTGG	1 cut(s)	824
PfoI	TCCNGGA	1 cut(s)	230
PkrI	GCNGC	9 cut(s)	37, 40, 58, 61, 64, 320, 410, 623, 1467
PleI	GAGTC	2 cut(s)	2072, 2197
PmaCI	CACGTG	1 cut(s)	795
PmlI	CACGTG	1 cut(s)	795
PpsI	GAGTC	2 cut(s)	2072, 2197
Ppu21I	YACGTR	1 cut(s)	795
PpuMI	RGGWCCY	1 cut(s)	359
PsiI	TTATAA	1 cut(s)	293
Psp124BI	GAGCTC	1 cut(s)	687
Psp5II	RGGWCCY	1 cut(s)	359
Psp6I	CCWGG	6 cut(s)	230, 823, 847, 943, 1392, 1908
PspCI	CACGTG	1 cut(s)	795
PspEI	GGTNACC	1 cut(s)	119
PspGI	CCWGG	6 cut(s)	230, 823, 847, 943, 1392, 1908
PspN4I	GGNNCC	8 cut(s)	360, 467, 520, 863, 1243, 1244, 1740, 1797
PspOMI	GGGCCC	1 cut(s)	1241
PspPI	GGNCC	7 cut(s)	234, 359, 807, 1160, 1241, 1242, 1795
PspPPI	RGGWCCY	1 cut(s)	359
PstI	CTGCAG	1 cut(s)	623
PstNI	CAGNNNCTG	1 cut(s)	65
PvuII	CAGCTG	1 cut(s)	65
RruI	TCGCGA	1 cut(s)	1101
RsaI	GTAC	5 cut(s)	565, 667, 1142, 1344, 1780
RsaNI	GTAC	5 cut(s)	564, 666, 1141, 1343, 1779
RseI	CAYNNNNRTG	3 cut(s)	114, 1452, 1662
SacI	GAGCTC	1 cut(s)	687
SapI	GCTCTTC	1 cut(s)	675
SatI	GCNGC	9 cut(s)	36, 39, 57, 60, 63, 319, 409, 622, 1466
Sau3AI	GATC	5 cut(s)	711, 1405, 1422, 1537, 2016
Sau96I	GGNCC	7 cut(s)	234, 359, 807, 1160, 1241, 1242, 1795
ScaI	AGTACT	1 cut(s)	1142
SchI	GAGTC	2 cut(s)	2073, 2198
ScrFI	CCNGG	7 cut(s)	232, 523, 825, 849, 945, 1394, 1910
SduI	GDGCHC	3 cut(s)	687, 818, 1245
SfaNI	GCATC	3 cut(s)	156, 693, 2036
SfcI	CTRYAG	3 cut(s)	619, 1123, 1257
SfuI	TTCGAA	3 cut(s)	678, 978, 1182
SinI	GGWCC	4 cut(s)	234, 359, 807, 1795
SmiMI	CAYNNNNRTG	3 cut(s)	114, 1452, 1662
SmlI	CTYRAG	4 cut(s)	87, 686, 1268, 2050
SmoI	CTYRAG	4 cut(s)	87, 686, 1268, 2050
SphI	GCATGC	2 cut(s)	780, 2284
SseBI	AGGCCT	1 cut(s)	2074
SsiI	CCGC	6 cut(s)	36, 83, 112, 318, 663, 1158
SspI	AATATT	1 cut(s)	259
SspMI	CTAG	6 cut(s)	53, 1206, 1221, 1469, 1502, 1925
SstI	GAGCTC	1 cut(s)	687
StuI	AGGCCT	1 cut(s)	2074
StyD4I	CCNGG	7 cut(s)	230, 521, 823, 847, 943, 1392, 1908
StyI	CCWWGG	2 cut(s)	1014, 2079
TaaI	ACNGT	3 cut(s)	453, 496, 1119
TaiI	ACGT	4 cut(s)	797, 932, 1405, 1842
TatI	WGTACW	1 cut(s)	1140
TauI	GCSGC	2 cut(s)	38, 321
TfiI	GAWTC	5 cut(s)	180, 200, 975, 1696, 1920
TscAI	CASTG	4 cut(s)	177, 253, 845, 2266
TseFI	GTSAC	4 cut(s)	152, 244, 1835, 2190
TseI	GCWGC	7 cut(s)	38, 56, 59, 62, 408, 621, 1465
Tsp45I	GTSAC	4 cut(s)	152, 244, 1835, 2190
TspGWI	ACGGA	3 cut(s)	230, 463, 939
TspRI	CASTG	4 cut(s)	177, 253, 845, 2266
Van91I	CCANNNNNTGG	1 cut(s)	824
Vha464I	CTTAAG	2 cut(s)	1268, 2050
VpaK11BI	GGWCC	4 cut(s)	234, 359, 807, 1795
XapI	RAATTY	6 cut(s)	286, 325, 608, 787, 1038, 1974
XceI	RCATGY	3 cut(s)	169, 780, 2284
XcmI	CCANNNNNNNNNTGG	1 cut(s)	941
XmnI	GAANNNNTTC	3 cut(s)	179, 674, 1806
XspI	CTAG	6 cut(s)	53, 1206, 1221, 1469, 1502, 1925
ZrmI	AGTACT	1 cut(s)	1142
Zsp2I	ATGCAT	1 cut(s)	778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.