RchiOBHm_Chr5g0019771

Protein OSB2, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
14193025 .. 14197534
4510 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29990

Sequence Viewer

Length: 1437 bp
ATGGAGCTCTGTTCCGGCACGGTAGCAGCAGCAACCACAACCTCACCTGGCCACTACTTCACTCCTCTCCACTCTCAACCCCACACCCCCAAATCCAAACCCCCCAACTTTGCCATGAACTCCCTCTTCCGATCAACACCGTTCACCAAACGCCTCCCATTTCGTCCCTTACAATCCCACTACTCCTCCACCTCCACCACTAAACCCAAAACCCCAAACACCTACACCATCTCCACCCCTCGTTTCACTCCAAAGTCCCCACCCCCCACCAAGCCCAACTTCCCCCGCCCCACTGAAGTCCCCTTCCAGCCCAAAGTCGCCAACTCCGTCCGCCTCATCGGCCACGTCCGTACGCCGCTTCAGGTCCAGACTACCCAAGATGGAGCTTTCTGGGCCGCCACCGTTCTCACCGCGTTTTCTTCTTCTTCTTCGTCCAAGTCGCTCCGGATTCCGATTATTTTCGAGGGGGACTTGGCTCACATTGCGAGTTTACATGTGAAAGACGATGATTATGTGTTTGTTGCTGGGAATTTGAGGTCGGATTTGAATCATCTTAATGCTCATGAGGGTCAGGCTCGTTTGCAGGTTAAGGTGCATACACTCAACTTTGTGGAGGAATCTTTTCCAATGAATACAAGATCCAAAGATGGCAGTGAAGAAAGGACCATTGATCACACTGTGGCAAGTGAGAAGGATGATATGAATGAATCACAGAAAGATATCCTAGTGTGGAAAAATATCCTTGTGTGGAAAGATCTCCTTGCCAAGCCTCATGAGTGGTGGGACGTCAGGTCGAAAGAGGGTTCTCCAAAGGCTGCAGCCTTTGAGCGTAAGAGTAATGGCGAATTACGTACGATTGATGATTCAACTCCTGAATGGATCCAACATAAGTTAGATTCCTTGACATTTGATCAGAAACCTAATTCACATAGTTCCGAAACCAGTTTGAGGGAAGATGGGGACTCTACATTGGGTACTTGGAGAGACCTTCTTGATAATCCAAAACAATGGATGGACTACCGTGACCAAAAACGTAATAAATTGGTAAAGCGAAATCACCCTGATTTCAAGTGTAAGGATGGTGGTCATGCACTCTGGCTTAACAAGGTACCGCAGTGGGTTTTGTCAGAGCTTAAAGGCATGGAGTTTGATGTTCCAATTCTGAAGCCCAAACAAGCAAATGAGGGTAGAGGTGATAAATCCTGGAAGGACTTGGTGGAAAACCCAGATAAATGGTGGGATAACAGATTGCAGAAGCGGAACGCAAAAGCTCCAGACTTTAAGCACAAAGAAACTGGTGAAGCGCTGTGGCTTAACAGTTCACCGGCATGGGCGATCCCCATGTTGCCACCTTTGAAAACACAGCAAAATATGACAACTGACGATAGGAATACACCTCTTCCTCGAAACATGGAAGCATCCGTTAGTGGTGTTTGA

Protein Analysis

478

Amino Acids

54.29

Weight (kDa)

9.17

Isoelectric Point (pI)

44.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 789
Acc36I ACCTGC 1 cut(s) 574
Acc65I GGTACC 1 cut(s) 1108
AccB1I GGYRCC 1 cut(s) 1108
AccII CGCG 1 cut(s) 413
AccIII TCCGGA 1 cut(s) 444
AciI CCGC 7 cut(s) 286, 331, 356, 396, 411, 1112, 1258
AclWI GGATC 4 cut(s) 633, 874, 887, 1330
AcoI YGGCCR 2 cut(s) 49, 340
AcsI RAATTY 1 cut(s) 529
AcuI CTGAAG 3 cut(s) 315, 344, 1184
AcyI GRCGYC 1 cut(s) 786
AdeI CACNNNGTG 1 cut(s) 679
AfaI GTAC 4 cut(s) 352, 853, 976, 1110
AfeI AGCGCT 1 cut(s) 1305
AfiI CCNNNNNNNGG 1 cut(s) 948
AflIII ACRYGT 1 cut(s) 493
AgsI TTSAA 4 cut(s) 547, 867, 1069, 1357
AhdI GACNNNNNGTC 1 cut(s) 790
AjiI CACGTC 1 cut(s) 346
AjnI CCWGG 2 cut(s) 46, 1202
AjuI GAANNNNNNNTTGG 2 cut(s) 263, 295
AluBI AGCT 4 cut(s) 7, 386, 1132, 1271
AluI AGCT 4 cut(s) 7, 386, 1132, 1271
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 1 cut(s) 978
AlwI GGATC 4 cut(s) 633, 874, 887, 1330
Aor13HI TCCGGA 1 cut(s) 444
Aor51HI AGCGCT 1 cut(s) 1305
AoxI GGCC 3 cut(s) 49, 340, 393
ApeKI GCWGC 4 cut(s) 26, 29, 815, 818
ApoI RAATTY 1 cut(s) 529
Asp700I GAANNNNTTC 1 cut(s) 621
Asp718I GGTACC 1 cut(s) 1108
AspLEI GCGC 1 cut(s) 1306
AspS9I GGNCC 3 cut(s) 364, 393, 663
AsuHPI GGTGA 7 cut(s) 36, 136, 400, 1049, 1205, 1310, 1314
AvaII GGWCC 2 cut(s) 364, 663
BaeI ACNNNNGTAYC 2 cut(s) 1100, 1133
BalI TGGCCA 1 cut(s) 51
BamHI GGATCC 1 cut(s) 879
BanI GGYRCC 1 cut(s) 1108
BanII GRGCYC 1 cut(s) 9
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 4 cut(s) 38, 41, 802, 830
BccI CCATC 6 cut(s) 236, 374, 641, 950, 1006, 1073
BciT130I CCWGG 2 cut(s) 48, 1204
BclI TGATCA 2 cut(s) 670, 910
BcoDI GTCTC 1 cut(s) 978
BfaI CTAG 1 cut(s) 725
BfmI CTRYAG 1 cut(s) 816
BfoI RGCGCY 1 cut(s) 1307
BfuAI ACCTGC 1 cut(s) 574
BglI GCCNNNNNGGC 1 cut(s) 339
BglII AGATCT 1 cut(s) 754
BisI GCNGC 6 cut(s) 27, 30, 356, 396, 816, 819
BlsI GCNGC 6 cut(s) 28, 31, 357, 397, 817, 820
Bme1390I CCNGG 2 cut(s) 48, 1204
Bme18I GGWCC 2 cut(s) 364, 663
BmeRI GACNNNNNGTC 1 cut(s) 790
BmgBI CACGTC 1 cut(s) 346
BmgT120I GGNCC 3 cut(s) 364, 393, 663
BmiI GGNNCC 2 cut(s) 881, 1110
BmrFI CCNGG 2 cut(s) 48, 1204
BmsI GCATC 1 cut(s) 1427
BpmI CTGGAG 1 cut(s) 1257
BsaAI YACGTR 1 cut(s) 851
BsaBI GATNNNNATC 1 cut(s) 546
BsaHI GRCGYC 1 cut(s) 786
BsaI GGTCTC 1 cut(s) 978
BsaWI WCCGGW 1 cut(s) 444
BsaXI ACNNNNNCTCC 4 cut(s) 170, 200, 215, 245
Bsc4I CCNNNNNNNGG 1 cut(s) 948
Bse118I RCCGGY 1 cut(s) 1324
Bse1I ACTGG 2 cut(s) 942, 1300
Bse3DI GCAATG 1 cut(s) 480
Bse8I GATNNNNATC 1 cut(s) 546
BseAI TCCGGA 1 cut(s) 444
BseBI CCWGG 2 cut(s) 48, 1204
BseGI GGATG 4 cut(s) 700, 1017, 1084, 1418
BseJI GATNNNNATC 1 cut(s) 546
BseLI CCNNNNNNNGG 1 cut(s) 948
BseMI GCAATG 1 cut(s) 480
BseNI ACTGG 2 cut(s) 942, 1300
BseRI GAGGAG 2 cut(s) 54, 175
BseXI GCAGC 4 cut(s) 38, 41, 802, 830
BseYI CCCAGC 1 cut(s) 524
Bsh1236I CGCG 1 cut(s) 413
BshFI GGCC 3 cut(s) 51, 342, 395
BshNI GGYRCC 1 cut(s) 1108
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 3 cut(s) 15, 445, 1325
BsiWI CGTACG 2 cut(s) 350, 851
BslFI GGGAC 6 cut(s) 150, 241, 284, 482, 797, 974
BslI CCNNNNNNNGG 1 cut(s) 948
BsmAI GTCTC 1 cut(s) 978
BsmFI GGGAC 6 cut(s) 150, 241, 284, 482, 797, 974
BsnI GGCC 3 cut(s) 51, 342, 395
Bso31I GGTCTC 1 cut(s) 978
Bsp1286I GDGCHC 1 cut(s) 9
Bsp13I TCCGGA 1 cut(s) 444
Bsp143I GATC 7 cut(s) 131, 638, 670, 754, 879, 910, 1335
BspACI CCGC 7 cut(s) 286, 331, 356, 396, 411, 1112, 1258
BspANI GGCC 3 cut(s) 51, 342, 395
BspEI TCCGGA 1 cut(s) 444
BspFNI CGCG 1 cut(s) 413
BspHI TCATGA 2 cut(s) 562, 772
BspLI GGNNCC 2 cut(s) 881, 1110
BspMAI CTGCAG 1 cut(s) 820
BspMI ACCTGC 1 cut(s) 574
BspPI GGATC 4 cut(s) 633, 874, 887, 1330
BspT107I GGYRCC 1 cut(s) 1108
BspTNI GGTCTC 1 cut(s) 978
BsrDI GCAATG 1 cut(s) 480
BsrFI RCCGGY 1 cut(s) 1324
BsrI ACTGG 2 cut(s) 942, 1300
BssAI RCCGGY 1 cut(s) 1324
BssMI GATC 7 cut(s) 131, 638, 670, 754, 879, 910, 1335
BssNI GRCGYC 1 cut(s) 786
Bst2UI CCWGG 2 cut(s) 48, 1204
Bst4CI ACNGT 6 cut(s) 22, 141, 403, 679, 1022, 1319
Bst6I CTCTTC 2 cut(s) 131, 1404
BstACI GRCGYC 1 cut(s) 786
BstBAI YACGTR 1 cut(s) 851
BstF5I GGATG 4 cut(s) 700, 1017, 1084, 1418
BstFNI CGCG 1 cut(s) 413
BstH2I RGCGCY 1 cut(s) 1307
BstHHI GCGC 1 cut(s) 1306
BstKTI GATC 7 cut(s) 134, 641, 673, 757, 882, 913, 1338
BstMAI GTCTC 1 cut(s) 978
BstMBI GATC 7 cut(s) 131, 638, 670, 754, 879, 910, 1335
BstMWI GCNNNNNNNGC 3 cut(s) 339, 392, 482
BstNI CCWGG 2 cut(s) 48, 1204
BstNSI RCATGY 1 cut(s) 497
BstSCI CCNGG 2 cut(s) 46, 1202
BstSFI CTRYAG 1 cut(s) 816
BstSNI TACGTA 1 cut(s) 851
BstUI CGCG 1 cut(s) 413
BstV1I GCAGC 4 cut(s) 38, 41, 802, 830
BstX2I RGATCY 3 cut(s) 638, 754, 879
BstXI CCANNNNNNTGG 2 cut(s) 1008, 1233
BstYI RGATCY 3 cut(s) 638, 754, 879
BsuRI GGCC 3 cut(s) 51, 342, 395
BtrI CACGTC 1 cut(s) 346
BtsCI GGATG 4 cut(s) 700, 1017, 1084, 1418
BtsI GCAGTG 2 cut(s) 658, 1121
BtsIMutI CAGTG 4 cut(s) 291, 658, 675, 1121
BveI ACCTGC 1 cut(s) 574
CciI TCATGA 2 cut(s) 562, 772
CfoI GCGC 1 cut(s) 1306
Cfr10I RCCGGY 1 cut(s) 1324
Cfr13I GGNCC 3 cut(s) 364, 393, 663
Csp6I GTAC 4 cut(s) 351, 852, 975, 1109
CviAII CATG 9 cut(s) 115, 494, 563, 773, 1088, 1141, 1329, 1342, 1411
CviQI GTAC 4 cut(s) 351, 852, 975, 1109
DpnI GATC 7 cut(s) 133, 640, 672, 756, 881, 912, 1337
DpnII GATC 7 cut(s) 131, 638, 670, 754, 879, 910, 1335
DraIII CACNNNGTG 1 cut(s) 679
DriI GACNNNNNGTC 1 cut(s) 790
EaeI YGGCCR 2 cut(s) 49, 340
Eam1104I CTCTTC 2 cut(s) 131, 1404
Eam1105I GACNNNNNGTC 1 cut(s) 790
EarI CTCTTC 2 cut(s) 131, 1404
EciI GGCGGA 1 cut(s) 320
Ecl136II GAGCTC 1 cut(s) 7
Eco105I TACGTA 1 cut(s) 851
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 1 cut(s) 978
Eco32I GATATC 1 cut(s) 721
Eco47I GGWCC 2 cut(s) 364, 663
Eco47III AGCGCT 1 cut(s) 1305
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 3 cut(s) 315, 344, 1184
EcoICRI GAGCTC 1 cut(s) 7
EcoRII CCWGG 2 cut(s) 46, 1202
EcoRV GATATC 1 cut(s) 721
EcoT38I GRGCYC 1 cut(s) 9
FaeI CATG 9 cut(s) 118, 497, 566, 776, 1091, 1144, 1332, 1345, 1414
FalI AAGNNNNNCTT 4 cut(s) 263, 295, 744, 776
FaqI GGGAC 6 cut(s) 150, 241, 284, 482, 797, 974
FatI CATG 9 cut(s) 114, 493, 562, 772, 1087, 1140, 1328, 1341, 1410
FauI CCCGC 1 cut(s) 293
FbaI TGATCA 2 cut(s) 670, 910
Fnu4HI GCNGC 6 cut(s) 27, 30, 356, 396, 816, 819
FokI GGATG 4 cut(s) 707, 1024, 1091, 1405
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 6 cut(s) 27, 30, 356, 396, 816, 819
FspBI CTAG 1 cut(s) 725
GlaI GCGC 1 cut(s) 1305
GluI GCNGC 6 cut(s) 27, 30, 356, 396, 816, 819
GsaI CCCAGC 1 cut(s) 528
GsuI CTGGAG 1 cut(s) 1257
HaeII RGCGCY 1 cut(s) 1307
HaeIII GGCC 3 cut(s) 51, 342, 395
HapII CCGG 3 cut(s) 15, 445, 1325
HhaI GCGC 1 cut(s) 1306
Hin1I GRCGYC 1 cut(s) 786
Hin1II CATG 9 cut(s) 118, 497, 566, 776, 1091, 1144, 1332, 1345, 1414
Hin6I GCGC 1 cut(s) 1304
HinP1I GCGC 1 cut(s) 1304
HinfI GANTC 7 cut(s) 448, 547, 617, 707, 863, 896, 962
HpaII CCGG 3 cut(s) 15, 445, 1325
HphI GGTGA 7 cut(s) 36, 136, 400, 1049, 1205, 1310, 1314
Hpy166II GTNNAC 3 cut(s) 144, 491, 1322
Hpy188I TCNGA 7 cut(s) 131, 453, 541, 915, 937, 1129, 1164
Hpy188III TCNNGA 7 cut(s) 367, 445, 563, 773, 872, 992, 1274
Hpy8I GTNNAC 3 cut(s) 144, 491, 1322
HpyAV CCTTC 4 cut(s) 313, 685, 998, 1201
HpyCH4III ACNGT 6 cut(s) 22, 141, 403, 679, 1022, 1319
HpyCH4IV ACGT 4 cut(s) 345, 786, 850, 1033
HpyCH4V TGCA 5 cut(s) 583, 595, 818, 1091, 1252
HpyF10VI GCNNNNNNNGC 3 cut(s) 339, 392, 482
HpySE526I ACGT 4 cut(s) 345, 786, 850, 1033
Hsp92I GRCGYC 1 cut(s) 786
Hsp92II CATG 9 cut(s) 118, 497, 566, 776, 1091, 1144, 1332, 1345, 1414
HspAI GCGC 1 cut(s) 1304
Kpn2I TCCGGA 1 cut(s) 444
KpnI GGTACC 1 cut(s) 1112
Ksp22I TGATCA 2 cut(s) 670, 910
Kzo9I GATC 7 cut(s) 131, 638, 670, 754, 879, 910, 1335
LmnI GCTCC 4 cut(s) 4, 383, 447, 1276
Lsp1109I GCAGC 4 cut(s) 38, 41, 802, 830
LweI GCATC 1 cut(s) 1427
MaeI CTAG 1 cut(s) 725
MaeII ACGT 4 cut(s) 345, 786, 850, 1033
MaeIII GTNAC 1 cut(s) 1022
MalI GATC 7 cut(s) 133, 640, 672, 756, 881, 912, 1337
MboI GATC 7 cut(s) 131, 638, 670, 754, 879, 910, 1335
MboII GAAGA 8 cut(s) 118, 411, 414, 417, 420, 668, 965, 1391
MflI RGATCY 3 cut(s) 638, 754, 879
MhlI GDGCHC 1 cut(s) 9
MlsI TGGCCA 1 cut(s) 51
MluCI AATT 5 cut(s) 529, 845, 922, 1040, 1158
MluNI TGGCCA 1 cut(s) 51
MlyI GAGTC 1 cut(s) 956
MmeI TCCRAC 2 cut(s) 519, 907
Mox20I TGGCCA 1 cut(s) 51
MroI TCCGGA 1 cut(s) 444
MroXI GAANNNNTTC 1 cut(s) 621
MscI TGGCCA 1 cut(s) 51
MseI TTAA 6 cut(s) 555, 588, 1101, 1134, 1281, 1314
MslI CAYNNNNRTG 2 cut(s) 555, 1327
Msp20I TGGCCA 1 cut(s) 51
MspI CCGG 3 cut(s) 15, 445, 1325
MspR9I CCNGG 2 cut(s) 48, 1204
MvaI CCWGG 2 cut(s) 48, 1204
MvnI CGCG 1 cut(s) 413
MwoI GCNNNNNNNGC 3 cut(s) 339, 392, 482
NdeII GATC 7 cut(s) 131, 638, 670, 754, 879, 910, 1335
NlaIII CATG 9 cut(s) 118, 497, 566, 776, 1091, 1144, 1332, 1345, 1414
NlaIV GGNNCC 2 cut(s) 881, 1110
NmuCI GTSAC 1 cut(s) 1022
NspI RCATGY 1 cut(s) 497
PagI TCATGA 2 cut(s) 562, 772
PciI ACATGT 1 cut(s) 493
PcsI WCGNNNNNNNCGW 1 cut(s) 324
PdmI GAANNNNTTC 1 cut(s) 621
PfeI GAWTC 6 cut(s) 448, 547, 617, 707, 863, 896
Pfl23II CGTACG 2 cut(s) 350, 851
PfoI TCCNGGA 1 cut(s) 1202
PkrI GCNGC 6 cut(s) 28, 31, 357, 397, 817, 820
PleI GAGTC 1 cut(s) 956
PpsI GAGTC 1 cut(s) 956
Ppu21I YACGTR 1 cut(s) 851
PscI ACATGT 1 cut(s) 493
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 2 cut(s) 46, 1202
PspFI CCCAGC 1 cut(s) 524
PspGI CCWGG 2 cut(s) 46, 1202
PspLI CGTACG 2 cut(s) 350, 851
PspN4I GGNNCC 2 cut(s) 881, 1110
PspPI GGNCC 3 cut(s) 364, 393, 663
PstI CTGCAG 1 cut(s) 820
PsuI RGATCY 3 cut(s) 638, 754, 879
RsaI GTAC 4 cut(s) 352, 853, 976, 1110
RsaNI GTAC 4 cut(s) 351, 852, 975, 1109
RseI CAYNNNNRTG 2 cut(s) 555, 1327
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 6 cut(s) 555, 588, 1101, 1134, 1281, 1314
SatI GCNGC 6 cut(s) 27, 30, 356, 396, 816, 819
Sau3AI GATC 7 cut(s) 131, 638, 670, 754, 879, 910, 1335
Sau96I GGNCC 3 cut(s) 364, 393, 663
SchI GAGTC 1 cut(s) 956
ScrFI CCNGG 2 cut(s) 48, 1204
SduI GDGCHC 1 cut(s) 9
SfaNI GCATC 1 cut(s) 1427
SfcI CTRYAG 1 cut(s) 816
SinI GGWCC 2 cut(s) 364, 663
SmiMI CAYNNNNRTG 2 cut(s) 555, 1327
SnaBI TACGTA 1 cut(s) 851
Sse9I AATT 5 cut(s) 529, 845, 922, 1040, 1158
SsiI CCGC 7 cut(s) 286, 331, 356, 396, 411, 1112, 1258
SspMI CTAG 1 cut(s) 725
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 2 cut(s) 46, 1202
TaaI ACNGT 6 cut(s) 22, 141, 403, 679, 1022, 1319
TaiI ACGT 4 cut(s) 348, 789, 853, 1036
TaqI TCGA 3 cut(s) 462, 794, 1405
TasI AATT 5 cut(s) 529, 845, 922, 1040, 1158
TauI GCSGC 2 cut(s) 358, 398
TfiI GAWTC 6 cut(s) 448, 547, 617, 707, 863, 896
Tru1I TTAA 6 cut(s) 555, 588, 1101, 1134, 1281, 1314
Tru9I TTAA 6 cut(s) 555, 588, 1101, 1134, 1281, 1314
TscAI CASTG 4 cut(s) 298, 658, 682, 1121
TseFI GTSAC 1 cut(s) 1022
TseI GCWGC 4 cut(s) 26, 29, 815, 818
Tsp45I GTSAC 1 cut(s) 1022
TspDTI ATGAA 4 cut(s) 131, 644, 716, 720
TspGWI ACGGA 3 cut(s) 316, 338, 1411
TspRI CASTG 4 cut(s) 298, 658, 682, 1121
VpaK11BI GGWCC 2 cut(s) 364, 663
XapI RAATTY 1 cut(s) 529
XceI RCATGY 1 cut(s) 497
XcmI CCANNNNNNNNNTGG 1 cut(s) 1233
XmnI GAANNNNTTC 1 cut(s) 621
XspI CTAG 1 cut(s) 725
ZraI GACGTC 1 cut(s) 787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.