Rh6AG080900

Protein OSB2, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
11836760 .. 11839415
2656 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG080900.1

Sequence Viewer

Length: 1314 bp
ATGGCCTCCTCCCACGACCACAACCACACCCTGAACGGCGATTCCAACACCCACGCCTCCAAAAAGCCCAAACTCTCCTTCATCACCCCCTCCGAAATCGCAGCCGAATTCTCCCACCACGACCCCACCGTCGCCCGAATCAACAACGGCAGCTTCGGGTCCTGCCCCGACTCCGTCCTCCAGGCCCAGCACCGCTGGCAGCTCAAGTACCTCTCCCAGCCCGATCACTTCTACTTCAACCACCTCCAAGCCGGCATCCTCCACTCCCGCACCCTCATCAAGGACCTCATCAACGCCAACCACGTCGACGAGGTCTCCATCGTCGACAACGCCACCACCGCCGCCGCCATCGTCCTCCAGCAGGCCACCTGGGGCTTCTCCGAGAGCAAGTTAGAGCAGGGCGACGCCGTCGTCATGCTCCACTACGCCTACGGAGCCGTCAAGAAGTCGATTGAGGCCTACGTCACTCGCGCCGGCGGGCACGTCATTGAGGTACCCTTGCCGTTTCCTTTGAATTCCAATGATGAGATTGTAACCGAGTTTAAGAAGGCTTTGGAGAAGGGGAAGGCTAATGTGGCAAGTGAGAAGGATGATATGAATGAATCACAGAAAGATATCCTAGTGTGGAAAGATCTCCTTGCCAAGCCTCATGAGTGGTGGGACGTCAGATCGAAAGAGGGTTCCCCAAAGGCTGCAGCCTTTGAGCGTAAGAGTAATGGCGAATTACGTATGATTGATGATTCAACTCCTGAATGGATCCAACATAAGTTAGATTCCTTGACATTTGATCAGAAACCTAATTCACATAGTTCCGAAACCAGTTTGAGGGAAGATGGGGACTCTACGTTGGGTACTTGGAGAGACCTTCTTGAAAATCCAAAACAATGGATGGACTACCGTGACCAAAAACGTAATAAATTGGTAAAGCGAAATCACCCTGATTTTAAGCGTAAGGATGGTGGTCATGCACTCTGGCTTAACAAGGTACCGCAGTGGGTTTTGTCAAAGCTTAAAGGCATGGAGTTTGATGTTCCAATTCGGAAGCCCAAACAAGCAAATGAGGGTAGAGGTGATAAATCCTGGAAAGACTTGGTGGAAAACCCAGATAAATGGTGGGATAACAGATTGCAGAAGCGGAACGCAAAAGCTCCAGACTTTAAGCACAAAGAAACTGGTGAAGCGCTGTGGCTTAACAGTTCACCGGCATGGGCGATCCCCATGTTGCCACCTTTGAAAACACAGCAAAATATGACGACTGACGATAGGAATACACCTCTTTCTCGAAACATGGAAGCATCCGTTAGTGGTGTTTGA

Protein Analysis

437

Amino Acids

49.65

Weight (kDa)

7.05

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 128, 410
AatII GACGTC 1 cut(s) 666
Acc65I GGTACC 2 cut(s) 493, 985
AccB1I GGYRCC 2 cut(s) 493, 985
AccI GTMKAC 2 cut(s) 306, 324
AccII CGCG 1 cut(s) 471
AciI CCGC 8 cut(s) 193, 268, 339, 342, 345, 477, 989, 1135
AclWI GGATC 3 cut(s) 751, 764, 1207
AcsI RAATTY 2 cut(s) 107, 514
AcyI GRCGYC 2 cut(s) 405, 663
AfaI GTAC 4 cut(s) 209, 495, 853, 987
AfeI AGCGCT 1 cut(s) 1182
AfiI CCNNNNNNNGG 3 cut(s) 280, 361, 825
AgsI TTSAA 5 cut(s) 238, 514, 744, 872, 1234
AjiI CACGTC 2 cut(s) 304, 484
AjnI CCWGG 3 cut(s) 180, 368, 1079
AjuI GAANNNNNNNTTGG 2 cut(s) 62, 94
AloI GAACNNNNNNTCC 2 cut(s) 26, 58
AluBI AGCT 4 cut(s) 153, 202, 1009, 1148
AluI AGCT 4 cut(s) 153, 202, 1009, 1148
Alw26I GTCTC 2 cut(s) 319, 855
AlwI GGATC 3 cut(s) 751, 764, 1207
Aor51HI AGCGCT 1 cut(s) 1182
AoxI GGCC 4 cut(s) 3, 183, 363, 456
ApeKI GCWGC 5 cut(s) 101, 150, 199, 692, 695
ApoI RAATTY 2 cut(s) 107, 514
Asp718I GGTACC 2 cut(s) 493, 985
AspLEI GCGC 2 cut(s) 473, 1183
AspS9I GGNCC 3 cut(s) 159, 184, 283
AsuHPI GGTGA 5 cut(s) 76, 926, 1082, 1187, 1191
AvaII GGWCC 2 cut(s) 159, 283
BaeGI GKGCMC 1 cut(s) 483
BaeI ACNNNNGTAYC 2 cut(s) 977, 1010
BamHI GGATCC 1 cut(s) 756
BanI GGYRCC 2 cut(s) 493, 985
BbvI GCAGC 5 cut(s) 113, 162, 211, 679, 707
BccI CCATC 5 cut(s) 326, 356, 827, 883, 950
BceAI ACGGC 5 cut(s) 52, 163, 392, 422, 487
BciT130I CCWGG 3 cut(s) 182, 370, 1081
BclI TGATCA 1 cut(s) 787
BcoDI GTCTC 2 cut(s) 319, 855
BfaI CTAG 1 cut(s) 620
BfmI CTRYAG 1 cut(s) 693
BfoI RGCGCY 1 cut(s) 1184
BglII AGATCT 1 cut(s) 631
BisI GCNGC 7 cut(s) 102, 151, 200, 342, 345, 693, 696
BlsI GCNGC 7 cut(s) 103, 152, 201, 343, 346, 694, 697
Bme1390I CCNGG 3 cut(s) 182, 370, 1081
Bme18I GGWCC 2 cut(s) 159, 283
BmgBI CACGTC 2 cut(s) 304, 484
BmgT120I GGNCC 3 cut(s) 159, 184, 283
BmiI GGNNCC 6 cut(s) 160, 436, 495, 682, 758, 987
BmrFI CCNGG 3 cut(s) 182, 370, 1081
BmsI GCATC 2 cut(s) 264, 1304
BpmI CTGGAG 3 cut(s) 164, 341, 1134
BpuEI CTTGAG 1 cut(s) 188
BsaAI YACGTR 1 cut(s) 728
BsaHI GRCGYC 2 cut(s) 405, 663
BsaI GGTCTC 2 cut(s) 319, 855
BsaJI CCNNGG 1 cut(s) 369
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 3 cut(s) 280, 361, 825
Bse118I RCCGGY 3 cut(s) 251, 473, 1201
Bse1I ACTGG 2 cut(s) 819, 1177
BseBI CCWGG 3 cut(s) 182, 370, 1081
BseDI CCNNGG 1 cut(s) 369
BseGI GGATG 5 cut(s) 255, 595, 894, 961, 1295
BseLI CCNNNNNNNGG 3 cut(s) 280, 361, 825
BseNI ACTGG 2 cut(s) 819, 1177
BseSI GKGCMC 1 cut(s) 483
BseXI GCAGC 5 cut(s) 113, 162, 211, 679, 707
BseYI CCCAGC 2 cut(s) 186, 216
Bsh1236I CGCG 1 cut(s) 471
BshFI GGCC 4 cut(s) 5, 185, 365, 458
BshNI GGYRCC 2 cut(s) 493, 985
BsiSI CCGG 3 cut(s) 252, 474, 1202
BslFI GGGAC 2 cut(s) 674, 851
BslI CCNNNNNNNGG 3 cut(s) 280, 361, 825
BsmAI GTCTC 2 cut(s) 319, 855
BsmFI GGGAC 2 cut(s) 674, 851
BsnI GGCC 4 cut(s) 5, 185, 365, 458
Bso31I GGTCTC 2 cut(s) 319, 855
Bsp1286I GDGCHC 1 cut(s) 483
Bsp143I GATC 6 cut(s) 223, 631, 668, 756, 787, 1212
BspACI CCGC 8 cut(s) 193, 268, 339, 342, 345, 477, 989, 1135
BspANI GGCC 4 cut(s) 5, 185, 365, 458
BspFNI CGCG 1 cut(s) 471
BspHI TCATGA 1 cut(s) 649
BspLI GGNNCC 6 cut(s) 160, 436, 495, 682, 758, 987
BspMAI CTGCAG 1 cut(s) 697
BspPI GGATC 3 cut(s) 751, 764, 1207
BspT107I GGYRCC 2 cut(s) 493, 985
BspTNI GGTCTC 2 cut(s) 319, 855
BsrFI RCCGGY 3 cut(s) 251, 473, 1201
BsrI ACTGG 2 cut(s) 819, 1177
BssAI RCCGGY 3 cut(s) 251, 473, 1201
BssECI CCNNGG 1 cut(s) 369
BssMI GATC 6 cut(s) 223, 631, 668, 756, 787, 1212
BssNI GRCGYC 2 cut(s) 405, 663
Bst2UI CCWGG 3 cut(s) 182, 370, 1081
Bst4CI ACNGT 3 cut(s) 130, 899, 1196
BstACI GRCGYC 2 cut(s) 405, 663
BstBAI YACGTR 1 cut(s) 728
BstC8I GCNNGC 5 cut(s) 197, 253, 363, 475, 479
BstENI CCTNNNNNAGG 2 cut(s) 278, 359
BstF5I GGATG 5 cut(s) 255, 595, 894, 961, 1295
BstFNI CGCG 1 cut(s) 471
BstH2I RGCGCY 1 cut(s) 1184
BstHHI GCGC 2 cut(s) 473, 1183
BstKTI GATC 6 cut(s) 226, 634, 671, 759, 790, 1215
BstMAI GTCTC 2 cut(s) 319, 855
BstMBI GATC 6 cut(s) 223, 631, 668, 756, 787, 1212
BstMWI GCNNNNNNNGC 4 cut(s) 196, 338, 434, 575
BstNI CCWGG 3 cut(s) 182, 370, 1081
BstSCI CCNGG 3 cut(s) 180, 368, 1079
BstSFI CTRYAG 1 cut(s) 693
BstSLI GKGCMC 1 cut(s) 483
BstSNI TACGTA 1 cut(s) 728
BstUI CGCG 1 cut(s) 471
BstV1I GCAGC 5 cut(s) 113, 162, 211, 679, 707
BstX2I RGATCY 2 cut(s) 631, 756
BstXI CCANNNNNNTGG 2 cut(s) 885, 1110
BstYI RGATCY 2 cut(s) 631, 756
BsuRI GGCC 4 cut(s) 5, 185, 365, 458
BtrI CACGTC 2 cut(s) 304, 484
BtsCI GGATG 5 cut(s) 255, 595, 894, 961, 1295
BtsI GCAGTG 1 cut(s) 998
BtsIMutI CAGTG 1 cut(s) 998
Cac8I GCNNGC 5 cut(s) 197, 253, 363, 475, 479
CciI TCATGA 1 cut(s) 649
CfoI GCGC 2 cut(s) 473, 1183
Cfr10I RCCGGY 3 cut(s) 251, 473, 1201
Cfr13I GGNCC 3 cut(s) 159, 184, 283
CseI GACGC 1 cut(s) 413
Csp6I GTAC 4 cut(s) 208, 494, 852, 986
CviAII CATG 7 cut(s) 415, 650, 965, 1018, 1206, 1219, 1288
CviQI GTAC 4 cut(s) 208, 494, 852, 986
DpnI GATC 6 cut(s) 225, 633, 670, 758, 789, 1214
DpnII GATC 6 cut(s) 223, 631, 668, 756, 787, 1212
DrdI GACNNNNNNGTC 2 cut(s) 128, 410
DseDI GACNNNNNNGTC 2 cut(s) 128, 410
Eco105I TACGTA 1 cut(s) 728
Eco147I AGGCCT 1 cut(s) 458
Eco31I GGTCTC 2 cut(s) 319, 855
Eco32I GATATC 1 cut(s) 616
Eco47I GGWCC 2 cut(s) 159, 283
Eco47III AGCGCT 1 cut(s) 1182
EcoNI CCTNNNNNAGG 2 cut(s) 278, 359
EcoO109I RGGNCCY 2 cut(s) 159, 283
EcoRI GAATTC 2 cut(s) 107, 514
EcoRII CCWGG 3 cut(s) 180, 368, 1079
EcoRV GATATC 1 cut(s) 616
FaeI CATG 7 cut(s) 418, 653, 968, 1021, 1209, 1222, 1291
FalI AAGNNNNNCTT 2 cut(s) 621, 653
FaqI GGGAC 2 cut(s) 674, 851
FatI CATG 7 cut(s) 414, 649, 964, 1017, 1205, 1218, 1287
FauI CCCGC 2 cut(s) 275, 470
FbaI TGATCA 1 cut(s) 787
FblI GTMKAC 2 cut(s) 306, 324
Fnu4HI GCNGC 7 cut(s) 102, 151, 200, 342, 345, 693, 696
FokI GGATG 5 cut(s) 242, 602, 901, 968, 1282
Fsp4HI GCNGC 7 cut(s) 102, 151, 200, 342, 345, 693, 696
FspBI CTAG 1 cut(s) 620
GlaI GCGC 2 cut(s) 472, 1182
GluI GCNGC 7 cut(s) 102, 151, 200, 342, 345, 693, 696
GsaI CCCAGC 2 cut(s) 190, 220
GsuI CTGGAG 3 cut(s) 164, 341, 1134
HaeII RGCGCY 1 cut(s) 1184
HaeIII GGCC 4 cut(s) 5, 185, 365, 458
HapII CCGG 3 cut(s) 252, 474, 1202
HgaI GACGC 1 cut(s) 413
HhaI GCGC 2 cut(s) 473, 1183
Hin1I GRCGYC 2 cut(s) 405, 663
Hin1II CATG 7 cut(s) 418, 653, 968, 1021, 1209, 1222, 1291
Hin6I GCGC 2 cut(s) 471, 1181
HinP1I GCGC 2 cut(s) 471, 1181
HincII GTYRAC 2 cut(s) 307, 325
HindII GTYRAC 2 cut(s) 307, 325
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 7 cut(s) 41, 138, 170, 602, 740, 773, 839
HpaII CCGG 3 cut(s) 252, 474, 1202
HphI GGTGA 5 cut(s) 76, 926, 1082, 1187, 1191
Hpy166II GTNNAC 3 cut(s) 307, 325, 1199
Hpy188I TCNGA 6 cut(s) 94, 382, 668, 792, 814, 1041
Hpy188III TCNNGA 6 cut(s) 442, 650, 749, 869, 1151, 1281
Hpy8I GTNNAC 3 cut(s) 307, 325, 1199
Hpy99I CGWCG 6 cut(s) 134, 308, 311, 326, 407, 413
HpyAV CCTTC 6 cut(s) 88, 541, 553, 559, 580, 875
HpyCH4III ACNGT 3 cut(s) 130, 899, 1196
HpyCH4IV ACGT 7 cut(s) 303, 462, 483, 663, 727, 845, 910
HpyCH4V TGCA 3 cut(s) 695, 968, 1129
HpyF10VI GCNNNNNNNGC 4 cut(s) 196, 338, 434, 575
HpySE526I ACGT 7 cut(s) 303, 462, 483, 663, 727, 845, 910
Hsp92I GRCGYC 2 cut(s) 405, 663
Hsp92II CATG 7 cut(s) 418, 653, 968, 1021, 1209, 1222, 1291
HspAI GCGC 2 cut(s) 471, 1181
KpnI GGTACC 2 cut(s) 497, 989
KroI GCCGGC 2 cut(s) 251, 473
KroNI GCCGGC 2 cut(s) 253, 475
Ksp22I TGATCA 1 cut(s) 787
Kzo9I GATC 6 cut(s) 223, 631, 668, 756, 787, 1212
LmnI GCTCC 3 cut(s) 423, 434, 1153
Lsp1109I GCAGC 5 cut(s) 113, 162, 211, 679, 707
LweI GCATC 2 cut(s) 264, 1304
MaeI CTAG 1 cut(s) 620
MaeII ACGT 7 cut(s) 303, 462, 483, 663, 727, 845, 910
MaeIII GTNAC 3 cut(s) 463, 532, 899
MalI GATC 6 cut(s) 225, 633, 670, 758, 789, 1214
MboI GATC 6 cut(s) 223, 631, 668, 756, 787, 1212
MboII GAAGA 1 cut(s) 842
MflI RGATCY 2 cut(s) 631, 756
MhlI GDGCHC 1 cut(s) 483
MluCI AATT 6 cut(s) 107, 514, 722, 799, 917, 1035
MlyI GAGTC 2 cut(s) 164, 833
MmeI TCCRAC 2 cut(s) 69, 784
MreI CGCCGGCG 1 cut(s) 473
MroNI GCCGGC 2 cut(s) 251, 473
MseI TTAA 6 cut(s) 543, 945, 978, 1011, 1158, 1191
MslI CAYNNNNRTG 1 cut(s) 1204
MspA1I CMGCKG 1 cut(s) 195
MspI CCGG 3 cut(s) 252, 474, 1202
MspR9I CCNGG 3 cut(s) 182, 370, 1081
MvaI CCWGG 3 cut(s) 182, 370, 1081
MvnI CGCG 1 cut(s) 471
MwoI GCNNNNNNNGC 4 cut(s) 196, 338, 434, 575
NaeI GCCGGC 2 cut(s) 253, 475
NdeII GATC 6 cut(s) 223, 631, 668, 756, 787, 1212
NgoMIV GCCGGC 2 cut(s) 251, 473
NlaIII CATG 7 cut(s) 418, 653, 968, 1021, 1209, 1222, 1291
NlaIV GGNNCC 6 cut(s) 160, 436, 495, 682, 758, 987
NmuCI GTSAC 2 cut(s) 463, 899
PagI TCATGA 1 cut(s) 649
PceI AGGCCT 1 cut(s) 458
PcsI WCGNNNNNNNCGW 2 cut(s) 126, 300
PdiI GCCGGC 2 cut(s) 253, 475
PfeI GAWTC 5 cut(s) 41, 138, 602, 740, 773
PflFI GACNNNGTC 3 cut(s) 173, 311, 407
PfoI TCCNGGA 1 cut(s) 1079
PkrI GCNGC 7 cut(s) 103, 152, 201, 343, 346, 694, 697
PleI GAGTC 2 cut(s) 164, 833
PpsI GAGTC 2 cut(s) 164, 833
Ppu21I YACGTR 1 cut(s) 728
PpuMI RGGWCCY 2 cut(s) 159, 283
Psp5II RGGWCCY 2 cut(s) 159, 283
Psp6I CCWGG 3 cut(s) 180, 368, 1079
PspFI CCCAGC 2 cut(s) 186, 216
PspGI CCWGG 3 cut(s) 180, 368, 1079
PspN4I GGNNCC 6 cut(s) 160, 436, 495, 682, 758, 987
PspPI GGNCC 3 cut(s) 159, 184, 283
PspPPI RGGWCCY 2 cut(s) 159, 283
PstI CTGCAG 1 cut(s) 697
PsuI RGATCY 2 cut(s) 631, 756
PsyI GACNNNGTC 3 cut(s) 173, 311, 407
RsaI GTAC 4 cut(s) 209, 495, 853, 987
RsaNI GTAC 4 cut(s) 208, 494, 852, 986
RseI CAYNNNNRTG 1 cut(s) 1204
SalI GTCGAC 2 cut(s) 305, 323
SaqAI TTAA 6 cut(s) 543, 945, 978, 1011, 1158, 1191
SatI GCNGC 7 cut(s) 102, 151, 200, 342, 345, 693, 696
Sau3AI GATC 6 cut(s) 223, 631, 668, 756, 787, 1212
Sau96I GGNCC 3 cut(s) 159, 184, 283
SchI GAGTC 2 cut(s) 164, 833
ScrFI CCNGG 3 cut(s) 182, 370, 1081
SduI GDGCHC 1 cut(s) 483
SfaNI GCATC 2 cut(s) 264, 1304
SfcI CTRYAG 1 cut(s) 693
SgrAI CRCCGGYG 1 cut(s) 473
SgrDI CGTCGACG 1 cut(s) 305
SinI GGWCC 2 cut(s) 159, 283
SmiMI CAYNNNNRTG 1 cut(s) 1204
SmlI CTYRAG 1 cut(s) 203
SmoI CTYRAG 1 cut(s) 203
SnaBI TACGTA 1 cut(s) 728
Sse9I AATT 6 cut(s) 107, 514, 722, 799, 917, 1035
SseBI AGGCCT 1 cut(s) 458
SsiI CCGC 8 cut(s) 193, 268, 339, 342, 345, 477, 989, 1135
SspMI CTAG 1 cut(s) 620
StuI AGGCCT 1 cut(s) 458
StyD4I CCNGG 3 cut(s) 180, 368, 1079
TaaI ACNGT 3 cut(s) 130, 899, 1196
TaiI ACGT 7 cut(s) 306, 465, 486, 666, 730, 848, 913
TaqI TCGA 5 cut(s) 306, 324, 449, 671, 1282
TasI AATT 6 cut(s) 107, 514, 722, 799, 917, 1035
TauI GCSGC 2 cut(s) 344, 347
TfiI GAWTC 5 cut(s) 41, 138, 602, 740, 773
Tru1I TTAA 6 cut(s) 543, 945, 978, 1011, 1158, 1191
Tru9I TTAA 6 cut(s) 543, 945, 978, 1011, 1158, 1191
TscAI CASTG 1 cut(s) 998
TseFI GTSAC 2 cut(s) 463, 899
TseI GCWGC 5 cut(s) 101, 150, 199, 692, 695
Tsp45I GTSAC 2 cut(s) 463, 899
TspDTI ATGAA 3 cut(s) 70, 611, 615
TspGWI ACGGA 3 cut(s) 163, 447, 1288
TspRI CASTG 1 cut(s) 998
Tth111I GACNNNGTC 3 cut(s) 173, 311, 407
VpaK11BI GGWCC 2 cut(s) 159, 283
XagI CCTNNNNNAGG 2 cut(s) 278, 359
XapI RAATTY 2 cut(s) 107, 514
XcmI CCANNNNNNNNNTGG 1 cut(s) 1110
XmiI GTMKAC 2 cut(s) 306, 324
XspI CTAG 1 cut(s) 620
ZraI GACGTC 1 cut(s) 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.