Rmu_ssc0000062.1_g000028

Protein OSB2, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000062.1
Physical Location & Seq
Reverse (-)
166693 .. 170729
4037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000062.1_g000028.1.cds

Sequence Viewer

Length: 1428 bp
atggagctctgttccggcacggtagcagcagcaaccactggccactacttcactcctctccactctcaatcccacacccccaaatccaaaccccccaactttgccatgaactccctcttccgatcaacacccttaaccaaacgcctcccatttcgtcccttacaatcccactactccaccacctcccccactaaacccaaaaccccaaacacctacaccatcaccacccctcgtttcactccaaagtctccaccccccaccaagcccaacttccctcgccccactgaagtccccttccagcccaaagtcgccaactccgtccgcctcatcggccacgtccgtacgccgcttcaggtccagactacccaagatggagctttctgggccgccaccgttctcaccgcgttttcttcttcttcttcttcttcggccaagtctctccggattccgattattttcgaggggcacttggctcacattgcgagtttacatgtgaaagacggtgattatgtgtttgttgctgggaatttgaggtcggatttgaatcatcttaatgctagtgagggtcaggctcaggcaagtgagaaggatgatatgaatgaatcacagaaagatatcctagtgtggaaaaatatccttgtgtggaaagatctccttgccaagcctcatgagtggtgggacgtcaggtcgaaagagggttccccaaaggctgcagcctttgagcgtaagagtaatggcgaattacgtatgattgatgattcaacacctgaatggatccaacataagttagattccttgacatttgatcagaaacctaattcacatagttccgaaaccagtttgagggaagatggggactctacgttgggtacttggagagaccttcttgataatccaaaacaatggatggactaccgtgaccaaaaacgtaataaattggtaaagcgaaatcaccctgatttcaagcgcaaggatggtggtcatgcactctggcttaacaaggtaccgcagtgggttttgtcagagcttaaaggcatggagtttgatgttccaattctgaagcccaaacaagcaaatgagggtagaggtgataaatcctggaaggacttggtggaaaacccagataaatggtgggataacagattgcagaaggtaaactgtgtagattttgatccgtcttgcatggtctcctttcccttcattacttattcgattaatgtttttgccttgctacatttacatttacagcggaacgcaaaagctccagacttcaagcataaagaaactggtgaagcgctgtggcttaacagttcaccggcatgggcgatccccatgttgccacctttgaaaactcagcaaaatatgacaactgacgataggaatacacctctttctcgaaacatggaagcatccgttagtggtgtttga

Protein Analysis

475

Amino Acids

53.83

Weight (kDa)

9.28

Isoelectric Point (pI)

45.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 684
Acc65I GGTACC 1 cut(s) 1003
AccB1I GGYRCC 1 cut(s) 1003
AccII CGCG 1 cut(s) 404
AccIII TCCGGA 1 cut(s) 441
AciI CCGC 6 cut(s) 322, 347, 387, 402, 1007, 1249
AclWI GGATC 4 cut(s) 769, 782, 1166, 1321
AcoI YGGCCR 3 cut(s) 40, 331, 429
AcsI RAATTY 1 cut(s) 526
AcuI CTGAAG 3 cut(s) 306, 335, 1079
AcyI GRCGYC 1 cut(s) 681
AfaI GTAC 3 cut(s) 343, 871, 1005
AfeI AGCGCT 1 cut(s) 1296
AfiI CCNNNNNNNGG 1 cut(s) 843
AflIII ACRYGT 1 cut(s) 490
AgsI TTSAA 5 cut(s) 544, 762, 964, 1273, 1348
AhdI GACNNNNNGTC 1 cut(s) 685
AjiI CACGTC 1 cut(s) 337
AjnI CCWGG 1 cut(s) 1097
AjuI GAANNNNNNNTTGG 2 cut(s) 254, 286
AluBI AGCT 4 cut(s) 7, 377, 1027, 1262
AluI AGCT 4 cut(s) 7, 377, 1027, 1262
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 4 cut(s) 252, 441, 873, 1192
AlwI GGATC 4 cut(s) 769, 782, 1166, 1321
Aor13HI TCCGGA 1 cut(s) 441
Aor51HI AGCGCT 1 cut(s) 1296
AoxI GGCC 4 cut(s) 40, 331, 384, 429
ApeKI GCWGC 4 cut(s) 26, 29, 710, 713
ApoI RAATTY 1 cut(s) 526
AseI ATTAAT 1 cut(s) 1215
Asp718I GGTACC 1 cut(s) 1003
AspLEI GCGC 2 cut(s) 969, 1297
AspS9I GGNCC 2 cut(s) 355, 384
AsuHPI GGTGA 7 cut(s) 214, 391, 515, 944, 1100, 1301, 1305
AvaII GGWCC 1 cut(s) 355
BaeGI GKGCMC 1 cut(s) 468
BaeI ACNNNNGTAYC 2 cut(s) 995, 1028
BalI TGGCCA 1 cut(s) 42
BamHI GGATCC 1 cut(s) 774
BanI GGYRCC 1 cut(s) 1003
BanII GRGCYC 1 cut(s) 9
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 4 cut(s) 38, 41, 697, 725
BccI CCATC 5 cut(s) 227, 365, 845, 901, 968
BciT130I CCWGG 1 cut(s) 1099
BclI TGATCA 1 cut(s) 805
BcoDI GTCTC 4 cut(s) 252, 441, 873, 1192
BfaI CTAG 2 cut(s) 558, 620
BfmI CTRYAG 1 cut(s) 711
BfoI RGCGCY 1 cut(s) 1298
BglI GCCNNNNNGGC 1 cut(s) 330
BglII AGATCT 1 cut(s) 649
BisI GCNGC 6 cut(s) 27, 30, 347, 387, 711, 714
BlsI GCNGC 6 cut(s) 28, 31, 348, 388, 712, 715
Bme1390I CCNGG 1 cut(s) 1099
Bme18I GGWCC 1 cut(s) 355
BmeRI GACNNNNNGTC 1 cut(s) 685
BmgBI CACGTC 1 cut(s) 337
BmgT120I GGNCC 2 cut(s) 355, 384
BmiI GGNNCC 3 cut(s) 700, 776, 1005
BmrFI CCNGG 1 cut(s) 1099
BmsI GCATC 1 cut(s) 1418
BpmI CTGGAG 1 cut(s) 1248
Bpu10I CCTNAGC 1 cut(s) 573
BsaAI YACGTR 1 cut(s) 746
BsaBI GATNNNNATC 2 cut(s) 543, 1170
BsaHI GRCGYC 1 cut(s) 681
BsaI GGTCTC 2 cut(s) 873, 1192
BsaWI WCCGGW 1 cut(s) 441
Bsc4I CCNNNNNNNGG 1 cut(s) 843
Bse118I RCCGGY 1 cut(s) 1315
Bse1I ACTGG 3 cut(s) 43, 837, 1291
Bse3DI GCAATG 1 cut(s) 477
Bse8I GATNNNNATC 2 cut(s) 543, 1170
BseAI TCCGGA 1 cut(s) 441
BseBI CCWGG 1 cut(s) 1099
BseGI GGATG 4 cut(s) 595, 912, 979, 1409
BseJI GATNNNNATC 2 cut(s) 543, 1170
BseLI CCNNNNNNNGG 1 cut(s) 843
BseMI GCAATG 1 cut(s) 477
BseMII CTCAG 2 cut(s) 587, 1367
BseNI ACTGG 3 cut(s) 43, 837, 1291
BseRI GAGGAG 1 cut(s) 45
BseSI GKGCMC 1 cut(s) 468
BseXI GCAGC 4 cut(s) 38, 41, 697, 725
BseYI CCCAGC 1 cut(s) 521
Bsh1236I CGCG 1 cut(s) 404
BshFI GGCC 4 cut(s) 42, 333, 386, 431
BshNI GGYRCC 1 cut(s) 1003
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 3 cut(s) 15, 442, 1316
BsiWI CGTACG 1 cut(s) 341
BslFI GGGAC 4 cut(s) 141, 275, 692, 869
BslI CCNNNNNNNGG 1 cut(s) 843
BsmAI GTCTC 4 cut(s) 252, 441, 873, 1192
BsmFI GGGAC 4 cut(s) 141, 275, 692, 869
BsnI GGCC 4 cut(s) 42, 333, 386, 431
Bso31I GGTCTC 2 cut(s) 873, 1192
Bsp1286I GDGCHC 2 cut(s) 9, 468
Bsp13I TCCGGA 1 cut(s) 441
Bsp143I GATC 6 cut(s) 122, 649, 774, 805, 1171, 1326
BspACI CCGC 6 cut(s) 322, 347, 387, 402, 1007, 1249
BspANI GGCC 4 cut(s) 42, 333, 386, 431
BspCNI CTCAG 2 cut(s) 586, 1366
BspEI TCCGGA 1 cut(s) 441
BspFNI CGCG 1 cut(s) 404
BspHI TCATGA 1 cut(s) 667
BspLI GGNNCC 3 cut(s) 700, 776, 1005
BspMAI CTGCAG 1 cut(s) 715
BspPI GGATC 4 cut(s) 769, 782, 1166, 1321
BspT107I GGYRCC 1 cut(s) 1003
BspTNI GGTCTC 2 cut(s) 873, 1192
BsrDI GCAATG 1 cut(s) 477
BsrFI RCCGGY 1 cut(s) 1315
BsrI ACTGG 3 cut(s) 43, 837, 1291
BssAI RCCGGY 1 cut(s) 1315
BssMI GATC 6 cut(s) 122, 649, 774, 805, 1171, 1326
BssNI GRCGYC 1 cut(s) 681
Bst2UI CCWGG 1 cut(s) 1099
Bst4CI ACNGT 6 cut(s) 22, 394, 503, 917, 1160, 1310
Bst6I CTCTTC 1 cut(s) 122
BstACI GRCGYC 1 cut(s) 681
BstBAI YACGTR 1 cut(s) 746
BstDEI CTNAG 2 cut(s) 573, 1353
BstF5I GGATG 4 cut(s) 595, 912, 979, 1409
BstFNI CGCG 1 cut(s) 404
BstH2I RGCGCY 1 cut(s) 1298
BstHHI GCGC 2 cut(s) 969, 1297
BstKTI GATC 6 cut(s) 125, 652, 777, 808, 1174, 1329
BstMAI GTCTC 4 cut(s) 252, 441, 873, 1192
BstMBI GATC 6 cut(s) 122, 649, 774, 805, 1171, 1326
BstMWI GCNNNNNNNGC 3 cut(s) 330, 383, 479
BstNI CCWGG 1 cut(s) 1099
BstNSI RCATGY 1 cut(s) 494
BstSCI CCNGG 1 cut(s) 1097
BstSFI CTRYAG 1 cut(s) 711
BstSLI GKGCMC 1 cut(s) 468
BstSNI TACGTA 1 cut(s) 746
BstUI CGCG 1 cut(s) 404
BstV1I GCAGC 4 cut(s) 38, 41, 697, 725
BstX2I RGATCY 2 cut(s) 649, 774
BstXI CCANNNNNNTGG 2 cut(s) 903, 1128
BstYI RGATCY 2 cut(s) 649, 774
BsuRI GGCC 4 cut(s) 42, 333, 386, 431
BtrI CACGTC 1 cut(s) 337
BtsCI GGATG 4 cut(s) 595, 912, 979, 1409
BtsI GCAGTG 1 cut(s) 1016
BtsIMutI CAGTG 3 cut(s) 36, 282, 1016
CciI TCATGA 1 cut(s) 667
CfoI GCGC 2 cut(s) 969, 1297
Cfr10I RCCGGY 1 cut(s) 1315
Cfr13I GGNCC 2 cut(s) 355, 384
Csp6I GTAC 3 cut(s) 342, 870, 1004
CspCI CAANNNNNGTGG 2 cut(s) 958, 993
CviAII CATG 9 cut(s) 106, 491, 668, 983, 1036, 1183, 1320, 1333, 1402
CviQI GTAC 3 cut(s) 342, 870, 1004
DdeI CTNAG 2 cut(s) 573, 1353
DpnI GATC 6 cut(s) 124, 651, 776, 807, 1173, 1328
DpnII GATC 6 cut(s) 122, 649, 774, 805, 1171, 1326
DriI GACNNNNNGTC 1 cut(s) 685
EaeI YGGCCR 3 cut(s) 40, 331, 429
Eam1104I CTCTTC 1 cut(s) 122
Eam1105I GACNNNNNGTC 1 cut(s) 685
EarI CTCTTC 1 cut(s) 122
EciI GGCGGA 1 cut(s) 311
Ecl136II GAGCTC 1 cut(s) 7
Eco105I TACGTA 1 cut(s) 746
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 2 cut(s) 873, 1192
Eco32I GATATC 1 cut(s) 616
Eco47I GGWCC 1 cut(s) 355
Eco47III AGCGCT 1 cut(s) 1296
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 3 cut(s) 306, 335, 1079
EcoICRI GAGCTC 1 cut(s) 7
EcoRII CCWGG 1 cut(s) 1097
EcoRV GATATC 1 cut(s) 616
EcoT38I GRGCYC 1 cut(s) 9
FaeI CATG 9 cut(s) 109, 494, 671, 986, 1039, 1186, 1323, 1336, 1405
FalI AAGNNNNNCTT 4 cut(s) 254, 286, 639, 671
FaqI GGGAC 4 cut(s) 141, 275, 692, 869
FatI CATG 9 cut(s) 105, 490, 667, 982, 1035, 1182, 1319, 1332, 1401
FbaI TGATCA 1 cut(s) 805
Fnu4HI GCNGC 6 cut(s) 27, 30, 347, 387, 711, 714
FokI GGATG 4 cut(s) 602, 919, 986, 1396
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 6 cut(s) 27, 30, 347, 387, 711, 714
FspBI CTAG 2 cut(s) 558, 620
GlaI GCGC 2 cut(s) 968, 1296
GluI GCNGC 6 cut(s) 27, 30, 347, 387, 711, 714
GsaI CCCAGC 1 cut(s) 525
GsuI CTGGAG 1 cut(s) 1248
HaeII RGCGCY 1 cut(s) 1298
HaeIII GGCC 4 cut(s) 42, 333, 386, 431
HapII CCGG 3 cut(s) 15, 442, 1316
HhaI GCGC 2 cut(s) 969, 1297
Hin1I GRCGYC 1 cut(s) 681
Hin1II CATG 9 cut(s) 109, 494, 671, 986, 1039, 1186, 1323, 1336, 1405
Hin6I GCGC 2 cut(s) 967, 1295
HinP1I GCGC 2 cut(s) 967, 1295
HinfI GANTC 6 cut(s) 445, 544, 602, 758, 791, 857
HpaII CCGG 3 cut(s) 15, 442, 1316
HphI GGTGA 7 cut(s) 214, 391, 515, 944, 1100, 1301, 1305
Hpy166II GTNNAC 3 cut(s) 488, 1156, 1313
Hpy188I TCNGA 7 cut(s) 122, 450, 538, 810, 832, 1024, 1059
Hpy188III TCNNGA 6 cut(s) 358, 442, 668, 887, 1265, 1395
Hpy8I GTNNAC 3 cut(s) 488, 1156, 1313
HpyAV CCTTC 6 cut(s) 304, 580, 893, 1096, 1144, 1207
HpyCH4III ACNGT 6 cut(s) 22, 394, 503, 917, 1160, 1310
HpyCH4IV ACGT 5 cut(s) 336, 681, 745, 863, 928
HpyCH4V TGCA 4 cut(s) 713, 986, 1147, 1182
HpyF10VI GCNNNNNNNGC 3 cut(s) 330, 383, 479
HpyF3I CTNAG 2 cut(s) 573, 1353
HpySE526I ACGT 5 cut(s) 336, 681, 745, 863, 928
Hsp92I GRCGYC 1 cut(s) 681
Hsp92II CATG 9 cut(s) 109, 494, 671, 986, 1039, 1186, 1323, 1336, 1405
HspAI GCGC 2 cut(s) 967, 1295
Kpn2I TCCGGA 1 cut(s) 441
KpnI GGTACC 1 cut(s) 1007
Ksp22I TGATCA 1 cut(s) 805
Kzo9I GATC 6 cut(s) 122, 649, 774, 805, 1171, 1326
LmnI GCTCC 3 cut(s) 4, 374, 1267
Lsp1109I GCAGC 4 cut(s) 38, 41, 697, 725
LweI GCATC 1 cut(s) 1418
MaeI CTAG 2 cut(s) 558, 620
MaeII ACGT 5 cut(s) 336, 681, 745, 863, 928
MaeIII GTNAC 1 cut(s) 917
MalI GATC 6 cut(s) 124, 651, 776, 807, 1173, 1328
MboI GATC 6 cut(s) 122, 649, 774, 805, 1171, 1326
MboII GAAGA 8 cut(s) 109, 402, 405, 408, 411, 414, 417, 860
MflI RGATCY 2 cut(s) 649, 774
MhlI GDGCHC 2 cut(s) 9, 468
MlsI TGGCCA 1 cut(s) 42
MluCI AATT 5 cut(s) 526, 740, 817, 935, 1053
MluNI TGGCCA 1 cut(s) 42
MlyI GAGTC 1 cut(s) 851
MmeI TCCRAC 2 cut(s) 516, 802
Mox20I TGGCCA 1 cut(s) 42
MroI TCCGGA 1 cut(s) 441
MscI TGGCCA 1 cut(s) 42
MseI TTAA 6 cut(s) 134, 552, 996, 1029, 1215, 1305
MslI CAYNNNNRTG 3 cut(s) 552, 769, 1318
Msp20I TGGCCA 1 cut(s) 42
MspA1I CMGCKG 1 cut(s) 1249
MspI CCGG 3 cut(s) 15, 442, 1316
MspR9I CCNGG 1 cut(s) 1099
MvaI CCWGG 1 cut(s) 1099
MvnI CGCG 1 cut(s) 404
MwoI GCNNNNNNNGC 3 cut(s) 330, 383, 479
NdeII GATC 6 cut(s) 122, 649, 774, 805, 1171, 1326
NlaIII CATG 9 cut(s) 109, 494, 671, 986, 1039, 1186, 1323, 1336, 1405
NlaIV GGNNCC 3 cut(s) 700, 776, 1005
NmuCI GTSAC 1 cut(s) 917
NspI RCATGY 1 cut(s) 494
PagI TCATGA 1 cut(s) 667
PciI ACATGT 1 cut(s) 490
PcsI WCGNNNNNNNCGW 1 cut(s) 315
PfeI GAWTC 5 cut(s) 445, 544, 602, 758, 791
Pfl23II CGTACG 1 cut(s) 341
PfoI TCCNGGA 1 cut(s) 1097
PkrI GCNGC 6 cut(s) 28, 31, 348, 388, 712, 715
PleI GAGTC 1 cut(s) 851
PpsI GAGTC 1 cut(s) 851
Ppu21I YACGTR 1 cut(s) 746
PscI ACATGT 1 cut(s) 490
PshBI ATTAAT 1 cut(s) 1215
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 1 cut(s) 1097
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 1 cut(s) 1097
PspLI CGTACG 1 cut(s) 341
PspN4I GGNNCC 3 cut(s) 700, 776, 1005
PspPI GGNCC 2 cut(s) 355, 384
PstI CTGCAG 1 cut(s) 715
PsuI RGATCY 2 cut(s) 649, 774
RsaI GTAC 3 cut(s) 343, 871, 1005
RsaNI GTAC 3 cut(s) 342, 870, 1004
RseI CAYNNNNRTG 3 cut(s) 552, 769, 1318
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 6 cut(s) 134, 552, 996, 1029, 1215, 1305
SatI GCNGC 6 cut(s) 27, 30, 347, 387, 711, 714
Sau3AI GATC 6 cut(s) 122, 649, 774, 805, 1171, 1326
Sau96I GGNCC 2 cut(s) 355, 384
SchI GAGTC 1 cut(s) 851
ScrFI CCNGG 1 cut(s) 1099
SduI GDGCHC 2 cut(s) 9, 468
SfaNI GCATC 1 cut(s) 1418
SfcI CTRYAG 1 cut(s) 711
SinI GGWCC 1 cut(s) 355
SmiMI CAYNNNNRTG 3 cut(s) 552, 769, 1318
SnaBI TACGTA 1 cut(s) 746
Sse9I AATT 5 cut(s) 526, 740, 817, 935, 1053
SsiI CCGC 6 cut(s) 322, 347, 387, 402, 1007, 1249
SspMI CTAG 2 cut(s) 558, 620
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 1 cut(s) 1097
TaaI ACNGT 6 cut(s) 22, 394, 503, 917, 1160, 1310
TaiI ACGT 5 cut(s) 339, 684, 748, 866, 931
TaqI TCGA 4 cut(s) 459, 689, 1211, 1396
TasI AATT 5 cut(s) 526, 740, 817, 935, 1053
TauI GCSGC 2 cut(s) 349, 389
TfiI GAWTC 5 cut(s) 445, 544, 602, 758, 791
Tru1I TTAA 6 cut(s) 134, 552, 996, 1029, 1215, 1305
Tru9I TTAA 6 cut(s) 134, 552, 996, 1029, 1215, 1305
TscAI CASTG 3 cut(s) 43, 289, 1016
TseFI GTSAC 1 cut(s) 917
TseI GCWGC 4 cut(s) 26, 29, 710, 713
Tsp45I GTSAC 1 cut(s) 917
TspDTI ATGAA 4 cut(s) 122, 611, 615, 1189
TspGWI ACGGA 4 cut(s) 307, 329, 1164, 1402
TspRI CASTG 3 cut(s) 43, 289, 1016
VpaK11BI GGWCC 1 cut(s) 355
VspI ATTAAT 1 cut(s) 1215
XapI RAATTY 1 cut(s) 526
XceI RCATGY 1 cut(s) 494
XcmI CCANNNNNNNNNTGG 1 cut(s) 1128
XspI CTAG 2 cut(s) 558, 620
ZraI GACGTC 1 cut(s) 682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.