Rw4G019420

Protein OSB2, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
42696092 .. 42696923
832 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G019420.1

Sequence Viewer

Length: 471 bp
ATGGGGACTCTACGTTGGGTACTTGGAGAGACCTTCTTGAAAATCCAAAACAATGGATGGACTACCGTGACCAAAAACGTAAAGCGAAATCACCCTGATTTCAAGCGTAAGGATGGTGGTCATGCACTCTGGCTTAACAAGGTACCGCAGTGGGTTTTGTCAAAGCTTAAAGGCATGGAGTTTGATGTTCCAATTCGGAAGCCCAAACAAGCAAATGAGGGTAGAGGCGATAAATCCTGGAAGGACTTGGTGGAAAACCCAGATAAATGGTGGGATAACAGATTGCAGAAGCGGAACGCAAAAGCTCCAGACTTTAAGCACAAAGAAACTGGTGAAGCGCTGTGGCTTAACAGTTCACCGGCATGGGCGATCCCCATGTTGCCACCTTTGAAAACACAGCAAAATATGACGACTGACGATAGGAATACACCTCTTTCTCTAAACATGGAAGCATCCGTTAGTGGTGTTTGA

Protein Analysis

156

Amino Acids

17.97

Weight (kDa)

9.9

Isoelectric Point (pI)

32.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 142
AccB1I GGYRCC 1 cut(s) 142
AciI CCGC 2 cut(s) 146, 292
AclWI GGATC 1 cut(s) 364
AfaI GTAC 2 cut(s) 21, 144
AfeI AGCGCT 1 cut(s) 339
AgsI TTSAA 3 cut(s) 40, 103, 391
AjnI CCWGG 1 cut(s) 236
AluBI AGCT 2 cut(s) 166, 305
AluI AGCT 2 cut(s) 166, 305
Alw26I GTCTC 1 cut(s) 23
AlwI GGATC 1 cut(s) 364
Aor51HI AGCGCT 1 cut(s) 339
Asp718I GGTACC 1 cut(s) 142
AspLEI GCGC 1 cut(s) 340
AsuHPI GGTGA 3 cut(s) 83, 344, 348
BaeI ACNNNNGTAYC 2 cut(s) 134, 167
BanI GGYRCC 1 cut(s) 142
BccI CCATC 2 cut(s) 51, 107
BciT130I CCWGG 1 cut(s) 238
BcoDI GTCTC 1 cut(s) 23
BfoI RGCGCY 1 cut(s) 341
Bme1390I CCNGG 1 cut(s) 238
BmiI GGNNCC 1 cut(s) 144
BmrFI CCNGG 1 cut(s) 238
BmsI GCATC 1 cut(s) 461
BpmI CTGGAG 1 cut(s) 291
BsaI GGTCTC 1 cut(s) 23
Bse118I RCCGGY 1 cut(s) 358
Bse1I ACTGG 1 cut(s) 334
BseBI CCWGG 1 cut(s) 238
BseGI GGATG 3 cut(s) 62, 118, 452
BseNI ACTGG 1 cut(s) 334
BshNI GGYRCC 1 cut(s) 142
BsiSI CCGG 1 cut(s) 359
BslFI GGGAC 1 cut(s) 19
BsmAI GTCTC 1 cut(s) 23
BsmFI GGGAC 1 cut(s) 19
Bso31I GGTCTC 1 cut(s) 23
Bsp143I GATC 1 cut(s) 369
BspACI CCGC 2 cut(s) 146, 292
BspLI GGNNCC 1 cut(s) 144
BspPI GGATC 1 cut(s) 364
BspT107I GGYRCC 1 cut(s) 142
BspTNI GGTCTC 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 358
BsrI ACTGG 1 cut(s) 334
BssAI RCCGGY 1 cut(s) 358
BssMI GATC 1 cut(s) 369
Bst2UI CCWGG 1 cut(s) 238
Bst4CI ACNGT 2 cut(s) 67, 353
BstF5I GGATG 3 cut(s) 62, 118, 452
BstH2I RGCGCY 1 cut(s) 341
BstHHI GCGC 1 cut(s) 340
BstKTI GATC 1 cut(s) 372
BstMAI GTCTC 1 cut(s) 23
BstMBI GATC 1 cut(s) 369
BstNI CCWGG 1 cut(s) 238
BstSCI CCNGG 1 cut(s) 236
BstXI CCANNNNNNTGG 2 cut(s) 53, 267
BtsCI GGATG 3 cut(s) 62, 118, 452
BtsI GCAGTG 1 cut(s) 155
BtsIMutI CAGTG 1 cut(s) 155
CfoI GCGC 1 cut(s) 340
Cfr10I RCCGGY 1 cut(s) 358
Csp6I GTAC 2 cut(s) 20, 143
CviAII CATG 5 cut(s) 122, 175, 363, 376, 445
CviJI RGCY 5 cut(s) 133, 166, 202, 305, 346
CviKI_1 RGCY 5 cut(s) 133, 166, 202, 305, 346
CviQI GTAC 2 cut(s) 20, 143
DpnI GATC 1 cut(s) 371
DpnII GATC 1 cut(s) 369
Eco31I GGTCTC 1 cut(s) 23
Eco47III AGCGCT 1 cut(s) 339
EcoRII CCWGG 1 cut(s) 236
FaeI CATG 5 cut(s) 125, 178, 366, 379, 448
FaiI YATR 6 cut(s) 123, 176, 364, 377, 407, 446
FaqI GGGAC 1 cut(s) 19
FatI CATG 5 cut(s) 121, 174, 362, 375, 444
FokI GGATG 3 cut(s) 69, 125, 439
GlaI GCGC 1 cut(s) 339
GsuI CTGGAG 1 cut(s) 291
HaeII RGCGCY 1 cut(s) 341
HapII CCGG 1 cut(s) 359
HhaI GCGC 1 cut(s) 340
Hin1II CATG 5 cut(s) 125, 178, 366, 379, 448
Hin6I GCGC 1 cut(s) 338
HinP1I GCGC 1 cut(s) 338
HindIII AAGCTT 1 cut(s) 164
HinfI GANTC 1 cut(s) 7
HpaII CCGG 1 cut(s) 359
HphI GGTGA 3 cut(s) 83, 344, 348
Hpy166II GTNNAC 1 cut(s) 356
Hpy188I TCNGA 1 cut(s) 198
Hpy188III TCNNGA 2 cut(s) 37, 308
Hpy8I GTNNAC 1 cut(s) 356
HpyAV CCTTC 2 cut(s) 43, 235
HpyCH4III ACNGT 2 cut(s) 67, 353
HpyCH4IV ACGT 2 cut(s) 13, 78
HpyCH4V TGCA 2 cut(s) 125, 286
HpySE526I ACGT 2 cut(s) 13, 78
Hsp92II CATG 5 cut(s) 125, 178, 366, 379, 448
HspAI GCGC 1 cut(s) 338
KpnI GGTACC 1 cut(s) 146
Kzo9I GATC 1 cut(s) 369
LmnI GCTCC 1 cut(s) 310
LpnPI CCDG 8 cut(s) 108, 115, 223, 250, 273, 315, 321, 372
LweI GCATC 1 cut(s) 461
MaeII ACGT 2 cut(s) 13, 78
MaeIII GTNAC 1 cut(s) 67
MalI GATC 1 cut(s) 371
MboI GATC 1 cut(s) 369
MluCI AATT 1 cut(s) 192
MnlI CCTC 3 cut(s) 211, 218, 441
MseI TTAA 4 cut(s) 135, 168, 315, 348
MslI CAYNNNNRTG 1 cut(s) 361
MspI CCGG 1 cut(s) 359
MspR9I CCNGG 1 cut(s) 238
MvaI CCWGG 1 cut(s) 238
NdeII GATC 1 cut(s) 369
NlaIII CATG 5 cut(s) 125, 178, 366, 379, 448
NlaIV GGNNCC 1 cut(s) 144
NmuCI GTSAC 1 cut(s) 67
PfoI TCCNGGA 1 cut(s) 236
Psp6I CCWGG 1 cut(s) 236
PspGI CCWGG 1 cut(s) 236
PspN4I GGNNCC 1 cut(s) 144
RsaI GTAC 2 cut(s) 21, 144
RsaNI GTAC 2 cut(s) 20, 143
RseI CAYNNNNRTG 1 cut(s) 361
SaqAI TTAA 4 cut(s) 135, 168, 315, 348
Sau3AI GATC 1 cut(s) 369
ScrFI CCNGG 1 cut(s) 238
SetI ASST 8 cut(s) 16, 35, 81, 144, 168, 307, 388, 433
SfaNI GCATC 1 cut(s) 461
SmiMI CAYNNNNRTG 1 cut(s) 361
Sse9I AATT 1 cut(s) 192
SsiI CCGC 2 cut(s) 146, 292
StyD4I CCNGG 1 cut(s) 236
TaaI ACNGT 2 cut(s) 67, 353
TaiI ACGT 2 cut(s) 16, 81
TasI AATT 1 cut(s) 192
Tru1I TTAA 4 cut(s) 135, 168, 315, 348
Tru9I TTAA 4 cut(s) 135, 168, 315, 348
TscAI CASTG 1 cut(s) 155
TseFI GTSAC 1 cut(s) 67
Tsp45I GTSAC 1 cut(s) 67
TspGWI ACGGA 1 cut(s) 445
TspRI CASTG 1 cut(s) 155
XcmI CCANNNNNNNNNTGG 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.