Clathrin adaptor complex small chain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G09800 AT3G09800 AT3G09800 AT3G09800 AT3G09800 AT4G08520 |
| fragaria_vesca | FvH4_3g06220 FvH4_6g33990 FvH4_6g33990 FvH4_6g33990 FvH4_6g33990 |
| malus_domestica | MD09G1190300.v1.1 MD17G1173400.v1.1 |
| prunus_persica | Prupe.3G046200_v2.0.a1 Prupe.3G046200_v2.0.a1 |
| pyrus_communis | pycom09g10680 |
| rosa_chinensis | RchiOBHm_Chr2g0124081 RchiOBHm_Chr2g0143981 RchiOBHm_Chr5g0013101 RchiOBHm_Chr5g0031791 RchiOBHm_Chr5g0057151 RchiOBHm_Chr5g0057191 RchiOBHm_Chr5g0078651 RchiOBHm_Chr6g0257861 RchiOBHm_Chr7g0236651 |
| rosa_laevigata | RLG00000020067 RLG00000031987 |
| rosa_roxburghii | Rroxscaffold_1G00063480 Rroxscaffold_2G00097030 Rroxscaffold_2G00101440 |
| rosa_rugosa | Rorug02G0207000 Rorug02G0385100 Rorug02G0385200 Rorug02G0385300 Rorug05G0007200 |
| rosa_samantha | Rh2AG120100 Rh2AG437900 Rh5DG097000 |
| rosa_wichuraiana | Rw2G035760 Rw5G008860 Rw5G047790 Rw5G047910 Rw7G026480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 38 |
| AcsI | RAATTY | 1 cut(s) | 74 |
| AcuI | CTGAAG | 1 cut(s) | 119 |
| AluBI | AGCT | 1 cut(s) | 156 |
| AluI | AGCT | 1 cut(s) | 156 |
| AoxI | GGCC | 1 cut(s) | 38 |
| ApeKI | GCWGC | 1 cut(s) | 156 |
| ApoI | RAATTY | 1 cut(s) | 74 |
| AsuHPI | GGTGA | 1 cut(s) | 110 |
| BalI | TGGCCA | 1 cut(s) | 40 |
| BbvI | GCAGC | 1 cut(s) | 143 |
| BfaI | CTAG | 1 cut(s) | 93 |
| BisI | GCNGC | 1 cut(s) | 157 |
| BlsI | GCNGC | 1 cut(s) | 158 |
| Bse1I | ACTGG | 1 cut(s) | 19 |
| BseGI | GGATG | 1 cut(s) | 15 |
| BseNI | ACTGG | 1 cut(s) | 19 |
| BseXI | GCAGC | 1 cut(s) | 143 |
| BsgI | GTGCAG | 2 cut(s) | 89, 148 |
| BshFI | GGCC | 1 cut(s) | 40 |
| BsnI | GGCC | 1 cut(s) | 40 |
| BspANI | GGCC | 1 cut(s) | 40 |
| BsrI | ACTGG | 1 cut(s) | 19 |
| BstF5I | GGATG | 1 cut(s) | 15 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 162 |
| BstNSI | RCATGY | 1 cut(s) | 11 |
| BstV1I | GCAGC | 1 cut(s) | 143 |
| BsuRI | GGCC | 1 cut(s) | 40 |
| BtsCI | GGATG | 1 cut(s) | 15 |
| CviAII | CATG | 1 cut(s) | 8 |
| CviJI | RGCY | 2 cut(s) | 40, 156 |
| CviKI_1 | RGCY | 2 cut(s) | 40, 156 |
| EaeI | YGGCCR | 1 cut(s) | 38 |
| Eco57I | CTGAAG | 1 cut(s) | 119 |
| EcoT22I | ATGCAT | 1 cut(s) | 9 |
| FaeI | CATG | 1 cut(s) | 11 |
| FaiI | YATR | 3 cut(s) | 9, 56, 58 |
| FatI | CATG | 1 cut(s) | 7 |
| Fnu4HI | GCNGC | 1 cut(s) | 157 |
| FokI | GGATG | 1 cut(s) | 2 |
| Fsp4HI | GCNGC | 1 cut(s) | 157 |
| FspBI | CTAG | 1 cut(s) | 93 |
| FspEI | CC | 8 cut(s) | 22, 32, 54, 56, 81, 122, 123, 136 |
| GluI | GCNGC | 1 cut(s) | 157 |
| HaeIII | GGCC | 1 cut(s) | 40 |
| Hin1II | CATG | 1 cut(s) | 11 |
| HinfI | GANTC | 1 cut(s) | 141 |
| HphI | GGTGA | 1 cut(s) | 110 |
| Hpy188I | TCNGA | 1 cut(s) | 31 |
| HpyCH4V | TGCA | 4 cut(s) | 7, 70, 159, 165 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 162 |
| Hsp92II | CATG | 1 cut(s) | 11 |
| LmnI | GCTCC | 1 cut(s) | 153 |
| LpnPI | CCDG | 3 cut(s) | 32, 56, 122 |
| Lsp1109I | GCAGC | 1 cut(s) | 143 |
| MaeI | CTAG | 1 cut(s) | 93 |
| MaeIII | GTNAC | 2 cut(s) | 88, 98 |
| MlsI | TGGCCA | 1 cut(s) | 40 |
| MluCI | AATT | 1 cut(s) | 74 |
| MluNI | TGGCCA | 1 cut(s) | 40 |
| MnlI | CCTC | 1 cut(s) | 89 |
| Mox20I | TGGCCA | 1 cut(s) | 40 |
| Mph1103I | ATGCAT | 1 cut(s) | 9 |
| MscI | TGGCCA | 1 cut(s) | 40 |
| Msp20I | TGGCCA | 1 cut(s) | 40 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 162 |
| NlaIII | CATG | 1 cut(s) | 11 |
| NmuCI | GTSAC | 2 cut(s) | 88, 98 |
| NsiI | ATGCAT | 1 cut(s) | 9 |
| NspI | RCATGY | 1 cut(s) | 11 |
| PfeI | GAWTC | 1 cut(s) | 141 |
| PkrI | GCNGC | 1 cut(s) | 158 |
| SatI | GCNGC | 1 cut(s) | 157 |
| SetI | ASST | 2 cut(s) | 100, 158 |
| SgeI | CNNG | 6 cut(s) | 20, 31, 83, 105, 141, 149 |
| Sse9I | AATT | 1 cut(s) | 74 |
| SspMI | CTAG | 1 cut(s) | 93 |
| TaqI | TCGA | 1 cut(s) | 130 |
| TasI | AATT | 1 cut(s) | 74 |
| TfiI | GAWTC | 1 cut(s) | 141 |
| TseFI | GTSAC | 2 cut(s) | 88, 98 |
| TseI | GCWGC | 1 cut(s) | 156 |
| Tsp45I | GTSAC | 2 cut(s) | 88, 98 |
| TspDTI | ATGAA | 2 cut(s) | 120, 126 |
| XapI | RAATTY | 1 cut(s) | 74 |
| XceI | RCATGY | 1 cut(s) | 11 |
| XspI | CTAG | 1 cut(s) | 93 |
| Zsp2I | ATGCAT | 1 cut(s) | 9 |