Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001832

Physical Location & Seq

Genomic Coordinates Reverse (-)

57967459 .. 57971030

Gene Structure 3572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004281

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGGTTTTCCAATTCACTCTGTTTTCCCCTGTTCTTGAAACAGAGGAGGTTTCGAATGAGATGCGATTCCCAATCCCAAAACTTCATTGTTCAACATGGGTTTTCCTCATAATCTTTGTCTTCTTCTTCTCCACTTCCAAATCAGATCCTCGAATCTCCGAAGCCGGTCAGTTCTGCGGAAATTCCACTCACACCTTTGACAGCAACTTCATTCCCAACTTCATAGACGCCATGGAATCCATCTCCAACAGTGTCAACGAGAAACAATGGGGAGAATACAGCATCACCTCACCGGCTCCAAAACTATACGCCTTTGCGCAATGCCATTCCGATCTCTCCCCAAAAGACTGCTCTACTTGTTTCGCAATTTCGAGAACCAAGCTCCCCAAATGCCTCCCTTCAACTTCAGCTCGCATCTACCTCGACGGTTGCTTCCTCGCTTACGATGACCATGACTTTTCGGGCCAGGCCCTCTACGAAGATCACAGGAAAGTGAAATGTGGGAGTCCAGTCGATTTTTCGAAAGATAATTACATGAAGGAGGGGTTTAACCTCAAGGTAAGGAATGTGATCGGTAACTTGACGAAGAAGGCTGAGGGGAATGAAGGGTTTGCCGTGGTGGGGCAGAGAGGTGGAGTTGAAAGTGTTTATGCATTGGCCCAGTGCTGGAGGACCATCAGCGATAAAGGGTGTAGAGATTGTTTGGAAGAAGCTGGGAAGATTCTCTGGGGATGCTTGCCTGGGAAGCAAGGTAGGGCTATGCTAGCAGGGTGTTATATGAGGTACTCTACTGAGAGATTTTCTGACATTGAAGAAGAAGAAGCAAATGGAAATGCTGATCTGTGGCATGTTCTAGCTGTCATTATAGCTGGAATGGTCATTTCTGTTTTGTCTCTCTTTGGGTTTATAATGGCCTACCGGAAATTACAAAAAATGACGGGAGTGGACAAATCCTCAATTGGTATATCAACTTCTCCACACAAGAACAGTTTGAATTTCAAGTACGAAATGCTGGAAAAGGCCACCGATTACTTCAATGCCTCGAGGAAACTTGGCCAAGGCGGAGCTGGTTCCGTATTCAAGGGAACTCTTCCGGATGGGAGCAATGTAGCAGTTAAAAGACTCTTCTTCAACACAAGGCAATGGGTGGATAACTTCTTCAATGAAGTAAACCTCATAAGTGGTATTCGACACAAGAACCTTGTTAGGCTTTTGGGTTGCAGCATTGAAGGTCCAGAAAGCCTTCTAGTCTATGAATATGTACCCAACAAAAGCCTTGATCAAATCCTTTTTGGTAGGGGCACTGAGCAAGTTTTAAGTTGGCAACAGAGATTTAACATCATTTCTGGAATTGCCGTGGGGCTTGTGCATCTCCATGAAAGTTGCGGAGAGAGAATTATTCACAGGGACATAAAATCCAGCAACATTCTCCTTGGTGAGGATCTTACTCCAAAGATTGCTGATTTTGGACTTGCGCGCTGTGTTGGTCCTGATAAGTCTCATCTTAGCACAGGAATTGCAGGCACATTAGGTTATATGGCTCCTGAATATCTTGTTCGAGGACAACCAGCCGATAAGGCTGATGTTTATGCATTTGGTGTGCTTGTTCTCGAGGTTGTATGTGGCAAGAAGAACCATGTTTTCATCAAGGGTTCACACTCAGTTCTTTATTCTGTTTATAAGCACTATAGGGCCAATACTATTACTGAATCTGTTGATGCCATTTTGAAGGGTGATTACTCCGAAAGAGAGGCGTCAAATGTACTTCAAATTAGGCTTCTGTGCACGCAAGCTTCTCTTGCACTGAGACCATCCATGTCCCAGGTAGTTCACATGCTGACCGATAGAGAATGTAGCATTCCTTCACCGAAACAGCCTCCATTCTTGAATGCCACCATGCTTAATTCGGATTCCTCTAGATCTACACTGAGCTATTTGTCAAAAGAGGGAGGAGAGTCTCTAAAGTCCACCGATCTAGCCAGCTTGGAATCAAATTGTATTCAAACAATGGAAGCATCTGAACCAAGCCTACGCTTTCCCACACGGTTGCCGAGCTTGGTGACGCGAGCTTGTGACCCAAGTGGGGGTATTAAAGGTGGACCTGGGAAGTTGGATCCGGTGCGGGCACACACCCTAAGGCTTGCGGGCCCTCCGGGGGAAAGTGAGCACTTTCCGTTTGGTTGTGGCGGCAGAAGGAGGTGCAGGTGTTTCTGCACAAGAGGCAGTGTCTCTGCCAGCGAAGGCCTGACAGTCGTGGAATGCCCAACGACTCGGAAGATGGGAGAGTTTACAGACCTCCATAGGCACCGGCGAACATACGCCGTGCCGTGTTACCGCCGCCCAAGACGGGCAGGCGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

787

Amino Acids

87.02

Weight (kDa)

8.47

Isoelectric Point (pI)

42.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	59 - 150	5.3e-13	Salt stress response/antifungal
Stress-antifung	PF01657	176 - 264	8.1e-13	Salt stress response/antifungal
Pkinase	PF00069	346 - 611	2.3e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	347 - 613	9.5e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40380 AT5G40380 AT5G40380
fragaria_vesca	FvH4_4g26070 FvH4_5g05520 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060
malus_domestica	MD14G1177300.v1.1 MD17G1031100.v1.1
prunus_persica	Prupe.3G288600_v2.0.a1 Prupe.5G171200_v2.0.a1
pyrus_communis	pycom14g14810 pycom17g02850
rosa_chinensis	RchiOBHm_Chr2g0089301 RchiOBHm_Chr2g0172611 RchiOBHm_Chr7g0193291
rosa_laevigata	RLG00000004281 RLG00000022120 RLG00000022121 RLG00000022125
rosa_multiflora	Rmu_co8025498.1_g000001 Rmu_sc0017093.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079690 Rroxscaffold_2G00079700 Rroxscaffold_3G00262230
rosa_rugosa	Rorug01G0488900 Rorug02G0246100 Rorug02G0560300 Rorug02G0560400 Rorug07G0008700
rosa_samantha	Rh2AG636700 Rh2AG636900 Rh2BG650100 Rh2BG650300 Rh2CG616800 Rh2CG616900 Rh2DG664300 Rh2DG664400 Rh7BG135300 Rh7CG138300 Rh7DG136300
rosa_wichuraiana	Rw2G052660 Rw2G052670 Rw7G011490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	908, 1680
AarI	CACCTGC	1 cut(s)	2193
AbsI	CCTCGAGG	1 cut(s)	1042
Acc16I	TGCGCA	1 cut(s)	318
Acc36I	ACCTGC	1 cut(s)	2193
AccB1I	GGYRCC	1 cut(s)	2304
AccII	CGCG	2 cut(s)	1477, 2065
AccIII	TCCGGA	1 cut(s)	1093
AciI	CCGC	8 cut(s)	177, 1062, 1386, 2122, 2144, 2187, 2335, 2338
AclWI	GGATC	4 cut(s)	140, 1449, 2108, 2121
AcoI	YGGCCR	1 cut(s)	1054
AcsI	RAATTY	2 cut(s)	181, 994
AcuI	CTGAAG	1 cut(s)	390
AcyI	GRCGYC	2 cut(s)	228, 1754
AfaI	GTAC	4 cut(s)	785, 1004, 1263, 1764
AfiI	CCNNNNNNNGG	7 cut(s)	621, 666, 1438, 2083, 2084, 2155, 2347
AjnI	CCWGG	4 cut(s)	465, 739, 1821, 2101
Alw21I	GWGCWC	2 cut(s)	1787, 2169
Alw26I	GTCTC	5 cut(s)	897, 1503, 1801, 1962, 2233
Alw44I	GTGCAC	1 cut(s)	1783
AlwI	GGATC	4 cut(s)	140, 1449, 2108, 2121
Ama87I	CYCGRG	2 cut(s)	1042, 1610
Aor13HI	TCCGGA	1 cut(s)	1093
AoxI	GGCC	9 cut(s)	463, 468, 657, 912, 1020, 1054, 1692, 2146, 2242
ApaI	GGGCCC	1 cut(s)	2150
ApaLI	GTGCAC	1 cut(s)	1783
ApeKI	GCWGC	1 cut(s)	1221
ApoI	RAATTY	2 cut(s)	181, 994
Asp700I	GAANNNNTTC	1 cut(s)	1242
AspLEI	GCGC	3 cut(s)	319, 1477, 1479
AsuC2I	CCSGG	1 cut(s)	2154
AsuHPI	GGTGA	6 cut(s)	277, 282, 1448, 1745, 1857, 2071
AsuII	TTCGAA	2 cut(s)	53, 521
AsuNHI	GCTAGC	1 cut(s)	763
AvaI	CYCGRG	2 cut(s)	1042, 1610
AvaII	GGWCC	4 cut(s)	672, 1232, 1487, 2099
AxyI	CCTNAGG	1 cut(s)	2135
BaeGI	GKGCMC	4 cut(s)	1304, 1787, 2128, 2150
BalI	TGGCCA	1 cut(s)	1056
BamHI	GGATCC	1 cut(s)	2113
BanI	GGYRCC	1 cut(s)	2304
BanII	GRGCYC	1 cut(s)	2150
BarI	GAAGNNNNNNTAC	6 cut(s)	955, 987, 1721, 1753, 1846, 1878
BbsI	GAAGAC	1 cut(s)	112
Bbv12I	GWGCWC	2 cut(s)	1787, 2169
BbvCI	CCTCAGC	1 cut(s)	594
BbvI	GCAGC	1 cut(s)	1233
BccI	CCATC	5 cut(s)	248, 683, 1091, 1819, 2272
BceAI	ACGGC	4 cut(s)	599, 1340, 2306, 2311
BcgI	CGANNNNNNTGC	4 cut(s)	43, 77, 403, 437
BciT130I	CCWGG	4 cut(s)	467, 741, 1823, 2103
BclI	TGATCA	1 cut(s)	1279
BcnI	CCSGG	1 cut(s)	2154
BcoDI	GTCTC	5 cut(s)	897, 1503, 1801, 1962, 2233
BfaI	CTAG	5 cut(s)	764, 854, 1247, 1917, 1976
BfmI	CTRYAG	1 cut(s)	1687
BfuAI	ACCTGC	1 cut(s)	2193
BglI	GCCNNNNNGGC	1 cut(s)	1577
BglII	AGATCT	1 cut(s)	1919
BisI	GCNGC	3 cut(s)	1222, 2188, 2338
BlsI	GCNGC	3 cut(s)	1223, 2189, 2339
Bme1390I	CCNGG	5 cut(s)	467, 741, 1823, 2103, 2154
Bme18I	GGWCC	4 cut(s)	672, 1232, 1487, 2099
BmeT110I	CYCGRG	2 cut(s)	1042, 1610
BmiI	GGNNCC	6 cut(s)	297, 1072, 1542, 2115, 2148, 2306
BmrFI	CCNGG	5 cut(s)	467, 741, 1823, 2103, 2154
BmrI	ACTGGG	1 cut(s)	655
BmsI	GCATC	7 cut(s)	51, 291, 423, 722, 1378, 1708, 2024
BmtI	GCTAGC	1 cut(s)	767
BmuI	ACTGGG	1 cut(s)	655
BpiI	GAAGAC	1 cut(s)	112
BpmI	CTGGAG	1 cut(s)	688
Bpu10I	CCTNAGC	1 cut(s)	594
Bpu14I	TTCGAA	2 cut(s)	53, 521
BpuEI	CTTGAG	1 cut(s)	539
BpuMI	CCSGG	1 cut(s)	2154
BsaHI	GRCGYC	2 cut(s)	228, 1754
BsaI	GGTCTC	1 cut(s)	1801
BsaJI	CCNNGG	9 cut(s)	231, 615, 740, 1057, 1356, 1432, 1821, 2102, 2153
BsaWI	WCCGGW	3 cut(s)	918, 1093, 2116
Bsc4I	CCNNNNNNNGG	7 cut(s)	621, 666, 1438, 2083, 2084, 2155, 2347
Bse118I	RCCGGY	3 cut(s)	164, 292, 2307
Bse1I	ACTGG	2 cut(s)	509, 661
Bse21I	CCTNAGG	1 cut(s)	2135
Bse3DI	GCAATG	3 cut(s)	326, 1111, 1148
BseAI	TCCGGA	1 cut(s)	1093
BseBI	CCWGG	4 cut(s)	467, 741, 1823, 2103
BseDI	CCNNGG	9 cut(s)	231, 615, 740, 1057, 1356, 1432, 1821, 2102, 2153
BseGI	GGATG	3 cut(s)	737, 1102, 1811
BseLI	CCNNNNNNNGG	7 cut(s)	621, 666, 1438, 2083, 2084, 2155, 2347
BseMI	GCAATG	3 cut(s)	326, 1111, 1148
BseMII	CTCAG	6 cut(s)	585, 783, 1296, 1674, 1796, 1919
BseNI	ACTGG	2 cut(s)	509, 661
BsePI	GCGCGC	1 cut(s)	1475
BseRI	GAGGAG	2 cut(s)	59, 1965
BseSI	GKGCMC	4 cut(s)	1304, 1787, 2128, 2150
BseXI	GCAGC	1 cut(s)	1233
BseYI	CCCAGC	1 cut(s)	713
BsgI	GTGCAG	2 cut(s)	2197, 2221
Bsh1236I	CGCG	2 cut(s)	1477, 2065
BshFI	GGCC	9 cut(s)	465, 470, 659, 914, 1022, 1056, 1694, 2148, 2244
BshNI	GGYRCC	1 cut(s)	2304
BsiHKAI	GWGCWC	2 cut(s)	1787, 2169
BsiHKCI	CYCGRG	2 cut(s)	1042, 1610
BsiSI	CCGG	7 cut(s)	165, 293, 919, 1094, 2117, 2153, 2308
BslFI	GGGAC	2 cut(s)	1421, 1804
BslI	CCNNNNNNNGG	7 cut(s)	621, 666, 1438, 2083, 2084, 2155, 2347
BsmAI	GTCTC	5 cut(s)	897, 1503, 1801, 1962, 2233
BsmFI	GGGAC	2 cut(s)	1421, 1804
BsmI	GAATGC	3 cut(s)	1857, 1894, 2264
BsnI	GGCC	9 cut(s)	465, 470, 659, 914, 1022, 1056, 1694, 2148, 2244
Bso31I	GGTCTC	1 cut(s)	1801
BsoBI	CYCGRG	2 cut(s)	1042, 1610
Bsp119I	TTCGAA	2 cut(s)	53, 521
Bsp120I	GGGCCC	1 cut(s)	2146
Bsp1286I	GDGCHC	5 cut(s)	1304, 1787, 2128, 2150, 2169
Bsp13I	TCCGGA	1 cut(s)	1093
Bsp19I	CCATGG	1 cut(s)	231
BspACI	CCGC	8 cut(s)	177, 1062, 1386, 2122, 2144, 2187, 2335, 2338
BspANI	GGCC	9 cut(s)	465, 470, 659, 914, 1022, 1056, 1694, 2148, 2244
BspCNI	CTCAG	6 cut(s)	586, 784, 1297, 1673, 1797, 1920
BspEI	TCCGGA	1 cut(s)	1093
BspFNI	CGCG	2 cut(s)	1477, 2065
BspLI	GGNNCC	6 cut(s)	297, 1072, 1542, 2115, 2148, 2306
BspMI	ACCTGC	1 cut(s)	2193
BspOI	GCTAGC	1 cut(s)	767
BspPI	GGATC	4 cut(s)	140, 1449, 2108, 2121
BspT104I	TTCGAA	2 cut(s)	53, 521
BspT107I	GGYRCC	1 cut(s)	2304
BspTNI	GGTCTC	1 cut(s)	1801
BsrDI	GCAATG	3 cut(s)	326, 1111, 1148
BsrFI	RCCGGY	3 cut(s)	164, 292, 2307
BsrI	ACTGG	2 cut(s)	509, 661
BssAI	RCCGGY	3 cut(s)	164, 292, 2307
BssECI	CCNNGG	9 cut(s)	231, 615, 740, 1057, 1356, 1432, 1821, 2102, 2153
BssHII	GCGCGC	1 cut(s)	1475
BssNI	GRCGYC	2 cut(s)	228, 1754
BssT1I	CCWWGG	3 cut(s)	231, 1057, 1432
Bst2UI	CCWGG	4 cut(s)	467, 741, 1823, 2103
Bst4CI	ACNGT	5 cut(s)	251, 428, 989, 2046, 2251
Bst6I	CTCTTC	2 cut(s)	1095, 1130
BstACI	GRCGYC	2 cut(s)	228, 1754
BstBI	TTCGAA	2 cut(s)	53, 521
BstDEI	CTNAG	8 cut(s)	594, 792, 1305, 1505, 1660, 1805, 1928, 2135
BstDSI	CCRYGG	3 cut(s)	231, 615, 1356
BstENI	CCTNNNNNAGG	1 cut(s)	1436
BstF5I	GGATG	3 cut(s)	737, 1102, 1811
BstFNI	CGCG	2 cut(s)	1477, 2065
BstHHI	GCGC	3 cut(s)	319, 1477, 1479
BstMAI	GTCTC	5 cut(s)	897, 1503, 1801, 1962, 2233
BstMWI	GCNNNNNNNGC	5 cut(s)	745, 764, 1577, 1799, 2220
BstNI	CCWGG	4 cut(s)	467, 741, 1823, 2103
BstNSI	RCATGY	2 cut(s)	851, 1837
BstSCI	CCNGG	5 cut(s)	465, 739, 1821, 2101, 2152
BstSFI	CTRYAG	1 cut(s)	1687
BstSLI	GKGCMC	4 cut(s)	1304, 1787, 2128, 2150
BstUI	CGCG	2 cut(s)	1477, 2065
BstV1I	GCAGC	1 cut(s)	1233
BstV2I	GAAGAC	1 cut(s)	112
BstX2I	RGATCY	4 cut(s)	145, 1441, 1919, 2113
BstYI	RGATCY	4 cut(s)	145, 1441, 1919, 2113
Bsu36I	CCTNAGG	1 cut(s)	2135
BsuRI	GGCC	9 cut(s)	465, 470, 659, 914, 1022, 1056, 1694, 2148, 2244
BtgI	CCRYGG	3 cut(s)	231, 615, 1356
BtsCI	GGATG	3 cut(s)	737, 1102, 1811
BtsI	GCAGTG	1 cut(s)	2230
BtsIMutI	CAGTG	6 cut(s)	256, 668, 1302, 1802, 1925, 2230
BveI	ACCTGC	1 cut(s)	2193
CfoI	GCGC	3 cut(s)	319, 1477, 1479
Cfr10I	RCCGGY	3 cut(s)	164, 292, 2307
CseI	GACGC	3 cut(s)	236, 1743, 2071
Csp6I	GTAC	4 cut(s)	784, 1003, 1262, 1763
CviQI	GTAC	4 cut(s)	784, 1003, 1262, 1763
DdeI	CTNAG	8 cut(s)	594, 792, 1305, 1505, 1660, 1805, 1928, 2135
EaeI	YGGCCR	1 cut(s)	1054
Eam1104I	CTCTTC	2 cut(s)	1095, 1130
EarI	CTCTTC	2 cut(s)	1095, 1130
EciI	GGCGGA	1 cut(s)	1077
Eco130I	CCWWGG	3 cut(s)	231, 1057, 1432
Eco147I	AGGCCT	1 cut(s)	2244
Eco24I	GRGCYC	1 cut(s)	2150
Eco31I	GGTCTC	1 cut(s)	1801
Eco47I	GGWCC	4 cut(s)	672, 1232, 1487, 2099
Eco57I	CTGAAG	1 cut(s)	390
Eco81I	CCTNAGG	1 cut(s)	2135
Eco88I	CYCGRG	2 cut(s)	1042, 1610
EcoNI	CCTNNNNNAGG	1 cut(s)	1436
EcoO109I	RGGNCCY	2 cut(s)	469, 2147
EcoRII	CCWGG	4 cut(s)	465, 739, 1821, 2101
EcoT14I	CCWWGG	3 cut(s)	231, 1057, 1432
EcoT22I	ATGCAT	2 cut(s)	655, 1594
EcoT38I	GRGCYC	1 cut(s)	2150
ErhI	CCWWGG	3 cut(s)	231, 1057, 1432
FalI	AAGNNNNNCTT	2 cut(s)	1782, 1814
FaqI	GGGAC	2 cut(s)	1421, 1804
FauI	CCCGC	2 cut(s)	2115, 2137
FbaI	TGATCA	1 cut(s)	1279
Fnu4HI	GCNGC	3 cut(s)	1222, 2188, 2338
FokI	GGATG	3 cut(s)	744, 1109, 1798
FriOI	GRGCYC	1 cut(s)	2150
Fsp4HI	GCNGC	3 cut(s)	1222, 2188, 2338
FspBI	CTAG	5 cut(s)	764, 854, 1247, 1917, 1976
FspI	TGCGCA	1 cut(s)	318
GlaI	GCGC	3 cut(s)	318, 1476, 1478
GluI	GCNGC	3 cut(s)	1222, 2188, 2338
GsaI	CCCAGC	1 cut(s)	717
GsuI	CTGGAG	1 cut(s)	688
HaeIII	GGCC	9 cut(s)	465, 470, 659, 914, 1022, 1056, 1694, 2148, 2244
HapII	CCGG	7 cut(s)	165, 293, 919, 1094, 2117, 2153, 2308
HgaI	GACGC	3 cut(s)	236, 1743, 2071
HhaI	GCGC	3 cut(s)	319, 1477, 1479
Hin1I	GRCGYC	2 cut(s)	228, 1754
Hin6I	GCGC	3 cut(s)	317, 1475, 1477
HinP1I	GCGC	3 cut(s)	317, 1475, 1477
HincII	GTYRAC	1 cut(s)	256
HindII	GTYRAC	1 cut(s)	256
HindIII	AAGCTT	1 cut(s)	1791
HpaII	CCGG	7 cut(s)	165, 293, 919, 1094, 2117, 2153, 2308
HphI	GGTGA	6 cut(s)	277, 282, 1448, 1745, 1857, 2071
Hpy166II	GTNNAC	9 cut(s)	256, 946, 1171, 1655, 1785, 1831, 1968, 2099, 2289
Hpy188I	TCNGA	8 cut(s)	145, 160, 331, 805, 1744, 1909, 2020, 2274
Hpy8I	GTNNAC	9 cut(s)	256, 946, 1171, 1655, 1785, 1831, 1968, 2099, 2289
Hpy99I	CGWCG	1 cut(s)	428
HpyCH4III	ACNGT	5 cut(s)	251, 428, 989, 2046, 2251
HpyCH4V	TGCA	9 cut(s)	653, 1221, 1369, 1520, 1592, 1785, 1802, 2202, 2214
HpyF10VI	GCNNNNNNNGC	5 cut(s)	745, 764, 1577, 1799, 2220
HpyF3I	CTNAG	8 cut(s)	594, 792, 1305, 1505, 1660, 1805, 1928, 2135
Hsp92I	GRCGYC	2 cut(s)	228, 1754
HspAI	GCGC	3 cut(s)	317, 1475, 1477
Kpn2I	TCCGGA	1 cut(s)	1093
Ksp22I	TGATCA	1 cut(s)	1279
LmnI	GCTCC	5 cut(s)	301, 387, 1064, 1101, 1546
Lsp1109I	GCAGC	1 cut(s)	1233
LweI	GCATC	7 cut(s)	51, 291, 423, 722, 1378, 1708, 2024
MaeI	CTAG	5 cut(s)	764, 854, 1247, 1917, 1976
MaeIII	GTNAC	4 cut(s)	575, 2059, 2072, 2330
MfeI	CAATTG	1 cut(s)	957
MflI	RGATCY	4 cut(s)	145, 1441, 1919, 2113
MhlI	GDGCHC	5 cut(s)	1304, 1787, 2128, 2150, 2169
MlsI	TGGCCA	1 cut(s)	1056
MluNI	TGGCCA	1 cut(s)	1056
MlyI	GAGTC	4 cut(s)	514, 1116, 1964, 2263
MmeI	TCCRAC	2 cut(s)	270, 2091
Mox20I	TGGCCA	1 cut(s)	1056
Mph1103I	ATGCAT	2 cut(s)	655, 1594
MroI	TCCGGA	1 cut(s)	1093
MroXI	GAANNNNTTC	1 cut(s)	1242
MscI	TGGCCA	1 cut(s)	1056
MseI	TTAA	6 cut(s)	549, 1116, 1316, 1335, 1902, 2091
MslI	CAYNNNNRTG	1 cut(s)	1374
Msp20I	TGGCCA	1 cut(s)	1056
MspI	CCGG	7 cut(s)	165, 293, 919, 1094, 2117, 2153, 2308
MspR9I	CCNGG	5 cut(s)	467, 741, 1823, 2103, 2154
MunI	CAATTG	1 cut(s)	957
Mva1269I	GAATGC	3 cut(s)	1857, 1894, 2264
MvaI	CCWGG	4 cut(s)	467, 741, 1823, 2103
MvnI	CGCG	2 cut(s)	1477, 2065
MwoI	GCNNNNNNNGC	5 cut(s)	745, 764, 1577, 1799, 2220
NciI	CCSGG	1 cut(s)	2154
NcoI	CCATGG	1 cut(s)	231
NheI	GCTAGC	1 cut(s)	763
NlaIV	GGNNCC	6 cut(s)	297, 1072, 1542, 2115, 2148, 2306
NmeAIII	GCCGAG	1 cut(s)	2076
NmuCI	GTSAC	2 cut(s)	2059, 2072
NsbI	TGCGCA	1 cut(s)	318
NsiI	ATGCAT	2 cut(s)	655, 1594
NspI	RCATGY	2 cut(s)	851, 1837
NspV	TTCGAA	2 cut(s)	53, 521
PaeR7I	CTCGAG	2 cut(s)	1042, 1610
PaqCI	CACCTGC	1 cut(s)	2193
PauI	GCGCGC	1 cut(s)	1475
PceI	AGGCCT	1 cut(s)	2244
PctI	GAATGC	3 cut(s)	1857, 1894, 2264
PdmI	GAANNNNTTC	1 cut(s)	1242
PfeI	GAWTC	7 cut(s)	66, 153, 236, 721, 1709, 1910, 1988
PkrI	GCNGC	3 cut(s)	1223, 2189, 2339
PleI	GAGTC	4 cut(s)	513, 1116, 1963, 2263
PpsI	GAGTC	4 cut(s)	513, 1116, 1963, 2263
PsiI	TTATAA	2 cut(s)	908, 1680
Psp6I	CCWGG	4 cut(s)	465, 739, 1821, 2101
PspFI	CCCAGC	1 cut(s)	713
PspGI	CCWGG	4 cut(s)	465, 739, 1821, 2101
PspN4I	GGNNCC	6 cut(s)	297, 1072, 1542, 2115, 2148, 2306
PspOMI	GGGCCC	1 cut(s)	2146
PspXI	VCTCGAGB	1 cut(s)	1042
PsrI	GAACNNNNNNTAC	2 cut(s)	2013, 2045
PsuI	RGATCY	4 cut(s)	145, 1441, 1919, 2113
PteI	GCGCGC	1 cut(s)	1475
RsaI	GTAC	4 cut(s)	785, 1004, 1263, 1764
RsaNI	GTAC	4 cut(s)	784, 1003, 1262, 1763
RseI	CAYNNNNRTG	1 cut(s)	1374
SaqAI	TTAA	6 cut(s)	549, 1116, 1316, 1335, 1902, 2091
SatI	GCNGC	3 cut(s)	1222, 2188, 2338
SchI	GAGTC	4 cut(s)	514, 1116, 1964, 2263
ScrFI	CCNGG	5 cut(s)	467, 741, 1823, 2103, 2154
SduI	GDGCHC	5 cut(s)	1304, 1787, 2128, 2150, 2169
SfaNI	GCATC	7 cut(s)	51, 291, 423, 722, 1378, 1708, 2024
SfcI	CTRYAG	1 cut(s)	1687
Sfr274I	CTCGAG	2 cut(s)	1042, 1610
SfuI	TTCGAA	2 cut(s)	53, 521
SgrAI	CRCCGGYG	1 cut(s)	2307
SinI	GGWCC	4 cut(s)	672, 1232, 1487, 2099
SlaI	CTCGAG	2 cut(s)	1042, 1610
SmiMI	CAYNNNNRTG	1 cut(s)	1374
SmlI	CTYRAG	3 cut(s)	554, 1042, 1610
SmoI	CTYRAG	3 cut(s)	554, 1042, 1610
SseBI	AGGCCT	1 cut(s)	2244
SsiI	CCGC	8 cut(s)	177, 1062, 1386, 2122, 2144, 2187, 2335, 2338
SspMI	CTAG	5 cut(s)	764, 854, 1247, 1917, 1976
StuI	AGGCCT	1 cut(s)	2244
StyD4I	CCNGG	5 cut(s)	465, 739, 1821, 2101, 2152
StyI	CCWWGG	3 cut(s)	231, 1057, 1432
TaaI	ACNGT	5 cut(s)	251, 428, 989, 2046, 2251
TaqII	GACCGA	1 cut(s)	1856
TatI	WGTACW	1 cut(s)	1762
TauI	GCSGC	2 cut(s)	2190, 2340
TfiI	GAWTC	7 cut(s)	66, 153, 236, 721, 1709, 1910, 1988
Tru1I	TTAA	6 cut(s)	549, 1116, 1316, 1335, 1902, 2091
Tru9I	TTAA	6 cut(s)	549, 1116, 1316, 1335, 1902, 2091
TscAI	CASTG	6 cut(s)	256, 668, 1309, 1809, 1932, 2230
TseFI	GTSAC	2 cut(s)	2059, 2072
TseI	GCWGC	1 cut(s)	1221
Tsp45I	GTSAC	2 cut(s)	2059, 2072
TspDTI	ATGAA	9 cut(s)	74, 199, 211, 551, 618, 1179, 1269, 1392, 1633
TspGWI	ACGGA	2 cut(s)	1063, 2163
TspRI	CASTG	6 cut(s)	256, 668, 1309, 1809, 1932, 2230
VneI	GTGCAC	1 cut(s)	1783
VpaK11BI	GGWCC	4 cut(s)	672, 1232, 1487, 2099
XagI	CCTNNNNNAGG	1 cut(s)	1436
XapI	RAATTY	2 cut(s)	181, 994
XbaI	TCTAGA	1 cut(s)	1916
XceI	RCATGY	2 cut(s)	851, 1837
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1064
XhoI	CTCGAG	2 cut(s)	1042, 1610
XmnI	GAANNNNTTC	1 cut(s)	1242
XspI	CTAG	5 cut(s)	764, 854, 1247, 1917, 1976
Zsp2I	ATGCAT	2 cut(s)	655, 1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.