Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001832

Physical Location & Seq

Genomic Coordinates Reverse (-)

56280342 .. 56283640

Gene Structure 3299 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00262230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGAATCCATCTCCAACAGTGTCAACGAGAAACAATGGGGAGAATACAGCATCACCTCACCGGCTCCAAAACTATACGCCTTTGCGCAATGCCATTCCGTTCACTCCCCAAAAGACTGTTCTACTTGTTTCGCAATTTCGAGAACCAAGCTCCCCAAATGCCTCCCTTCAACTTCAGCTCGCATCTACCTCGACGGTTGCTTCCTTGCTTACGATGACCATGACTTTTCGGGCCAGGCCCTCGACGAAGATCACAGGAAAGTGAAATGTGGGAGTCCAGTCGATTTTCCGAAAGATAATTACATGAAGGAGGGGTTTAACGTCAAGGTAAGGGATGTGATTATAAACTTGACGAAGAAGGCCGAGGGGAATGAAGGGTTTGCTGTGGTGGGGCAGAGAGGTGGAGTTGAAAGTGTTTATGCATTGACCCAGTGCTGGAGGACCATCAGCGATAAAGGGTGTAGAGATTGTTTGGAAGAAGCTGGGAAGATTCTCGGGGATGCTTGCCTGGGAAGCAAGGTAGGGCTATACTGGCAGGCTGATCTGTGGCATGTTCTAGCTGTCATTATAGCTGGAATGGTCATTTCTGTTTTGTCTCTCTTTGGGTTTATAATGGCCTACCGGAAATTACAAAAAATGACAAGAGTGGACAAATACTCAATTGGGATATCAACTTCTCCACGCAAGAACAGCTTGAATTTCAAGTACGAAATGCTGGAAAAGGCCACCGATTACTTCAATGCCTCGAGGAAACTTGGCCAAGGCGGAGCTGGTTCCGTATTCAGGGGAACTCTTCCGGATGGGAGCAATGTAGCAGTTAAAAGACTCTTCTTCAACACAAGGCAATGGGTGGATAACTTCTTCAATGAAGTAAACCTCATAAGTGGTATTCGACACAAGAACCTTGTTAGGCTTTTGGGTTGCAGCATTGAAGGTCCAGAAAACCTTCTAGTCTATGAATATGTACCCAACAAAAGCCTTGATCAAATCCTTTTTGGTAGGGGCACCGAGCAAGTTTTAAGTTGGCAACAGAGATTTAACGTCATTTCTGGAATTGCTGAGGGGCTTGTGCATCTCCATGAAAGTTGCGGCGAGAAAATTATTCACAGGGACATAAAATCCAGCAACATTCTCCTTGATGAGGATCTTACTCCAAAGATTGCTGATTTTGGACTTGCGCGCTGTGTTGGTCCTGATAAGGGTTATATGGCTCCTGAATATCTTGTTCGAGGACAACTAACCGATAAGGCTGATGTTTATGCCTTTGGTGTGCTTGTTCTCGAGATTGTATGTGGTAGGAAGAACCATGTTATCATCGAGGGTTCACACTCAGTTCTTTATTCTCTTTATAAGCACTATAGGGCCAATACTATTACTGAATCTGTTGATGCCATGTTGAAAGGTGGGTACTCTGAAAGAGAGGCATTGAATGTACTTCAAATTGGGCTTCTGTGCACGCAAGCTTCTCTTGCACTGAGACCATCCATGTCTGAGGCAGTTCACATGCTGACCGATAAAGAATGTAGCATTCCTTCACCGAAACAGCCTCCATACTTGAATGCCAGCATACTTAATTCGGATTCCTCTAGATCTACATTGAGCTATTTGTCAAAAGAGGGAGGAGAGTCTCTAAAGTCCGCCGATCTAGCCAGCTTGGAATCAAATTGTATTCAAACAATGGAAGCATCTGAACCAAGGTCTGGAATTCTTCATTACATGATGGTTGTGGAATGCCCGACGTCTCGGAAGATGGAGAAAGAACCTCCATACGCAACGGCGAGCAAACGCCGTGTTACCGCCGCCCCTTGGGATGGGCAGGCGACTGAAGGCTGCAGGTTGCAGCAGCTGCAGCTCCACGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

620

Amino Acids

68.75

Weight (kDa)

7.76

Isoelectric Point (pI)

42.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	4 - 73	6.3e-09	Salt stress response/antifungal
Stress-antifung	PF01657	101 - 178	1.4e-08	Salt stress response/antifungal
Pkinase	PF00069	247 - 451	4.5e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	248 - 502	5.8e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40380 AT5G40380 AT5G40380
fragaria_vesca	FvH4_4g26070 FvH4_5g05520 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060
malus_domestica	MD14G1177300.v1.1 MD17G1031100.v1.1
prunus_persica	Prupe.3G288600_v2.0.a1 Prupe.5G171200_v2.0.a1
pyrus_communis	pycom14g14810 pycom17g02850
rosa_chinensis	RchiOBHm_Chr2g0089301 RchiOBHm_Chr2g0172611 RchiOBHm_Chr7g0193291
rosa_laevigata	RLG00000004281 RLG00000022120 RLG00000022121 RLG00000022125
rosa_multiflora	Rmu_co8025498.1_g000001 Rmu_sc0017093.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079690 Rroxscaffold_2G00079700 Rroxscaffold_3G00262230
rosa_rugosa	Rorug01G0488900 Rorug02G0246100 Rorug02G0560300 Rorug02G0560400 Rorug07G0008700
rosa_samantha	Rh2AG636700 Rh2AG636900 Rh2BG650100 Rh2BG650300 Rh2CG616800 Rh2CG616900 Rh2DG664300 Rh2DG664400 Rh7BG135300 Rh7CG138300 Rh7DG136300
rosa_wichuraiana	Rw2G052660 Rw2G052670 Rw7G011490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	344, 611, 1350
AatII	GACGTC	1 cut(s)	1742
AbsI	CCTCGAGG	1 cut(s)	745
Acc16I	TGCGCA	1 cut(s)	87
Acc36I	ACCTGC	1 cut(s)	1824
AccB1I	GGYRCC	1 cut(s)	1004
AccB7I	CCANNNNNTGG	1 cut(s)	1700
AccII	CGCG	1 cut(s)	1180
AccIII	TCCGGA	1 cut(s)	796
AciI	CCGC	5 cut(s)	765, 1089, 1638, 1797, 1800
AclWI	GGATC	1 cut(s)	1152
AcoI	YGGCCR	1 cut(s)	757
AcsI	RAATTY	2 cut(s)	697, 1704
AcuI	CTGAAG	2 cut(s)	159, 1845
AcyI	GRCGYC	1 cut(s)	1739
AfaI	GTAC	4 cut(s)	707, 966, 1409, 1434
AfiI	CCNNNNNNNGG	7 cut(s)	435, 783, 1141, 1199, 1700, 1806, 1811
AjnI	CCWGG	2 cut(s)	234, 507
AjuI	GAANNNNNNNTTGG	2 cut(s)	103, 135
Alw21I	GWGCWC	1 cut(s)	1457
Alw26I	GTCTC	4 cut(s)	600, 1471, 1632, 1746
Alw44I	GTGCAC	1 cut(s)	1453
AlwI	GGATC	1 cut(s)	1152
AlwNI	CAGNNNCTG	1 cut(s)	1846
Ama87I	CYCGRG	3 cut(s)	494, 745, 1280
Aor13HI	TCCGGA	1 cut(s)	796
AoxI	GGCC	7 cut(s)	232, 237, 360, 615, 723, 757, 1362
ApaLI	GTGCAC	1 cut(s)	1453
ApeKI	GCWGC	6 cut(s)	924, 1830, 1840, 1843, 1846, 1849
ApoI	RAATTY	2 cut(s)	697, 1704
Asp700I	GAANNNNTTC	1 cut(s)	945
AspLEI	GCGC	3 cut(s)	88, 1180, 1182
AspS9I	GGNCC	6 cut(s)	232, 238, 441, 935, 1190, 1362
AsuHPI	GGTGA	3 cut(s)	46, 51, 1527
AvaI	CYCGRG	3 cut(s)	494, 745, 1280
AvaII	GGWCC	3 cut(s)	441, 935, 1190
BaeGI	GKGCMC	2 cut(s)	1007, 1457
BalI	TGGCCA	1 cut(s)	759
BanI	GGYRCC	1 cut(s)	1004
BarI	GAAGNNNNNNTAC	2 cut(s)	1516, 1548
Bbv12I	GWGCWC	1 cut(s)	1457
BbvCI	CCTCAGC	1 cut(s)	1059
BbvI	GCAGC	5 cut(s)	936, 1817, 1833, 1852, 1855
BccI	CCATC	7 cut(s)	17, 452, 794, 1489, 1714, 1744, 1805
BceAI	ACGGC	2 cut(s)	1773, 1791
BcgI	CGANNNNNNTGC	2 cut(s)	172, 206
BciT130I	CCWGG	2 cut(s)	236, 509
BclI	TGATCA	1 cut(s)	982
BcoDI	GTCTC	4 cut(s)	600, 1471, 1632, 1746
BfaI	CTAG	4 cut(s)	557, 950, 1587, 1646
BfmI	CTRYAG	3 cut(s)	1357, 1831, 1847
BfuAI	ACCTGC	1 cut(s)	1824
BglII	AGATCT	1 cut(s)	1589
BisI	GCNGC	8 cut(s)	925, 1090, 1800, 1831, 1841, 1844, 1847, 1850
BlsI	GCNGC	8 cut(s)	926, 1091, 1801, 1832, 1842, 1845, 1848, 1851
Bme1390I	CCNGG	2 cut(s)	236, 509
Bme18I	GGWCC	3 cut(s)	441, 935, 1190
BmeT110I	CYCGRG	3 cut(s)	494, 745, 1280
BmgT120I	GGNCC	6 cut(s)	232, 238, 441, 935, 1190, 1362
BmiI	GGNNCC	4 cut(s)	66, 775, 1006, 1212
BmrFI	CCNGG	2 cut(s)	236, 509
BmrI	ACTGGG	1 cut(s)	424
BmsI	GCATC	6 cut(s)	60, 192, 490, 1081, 1378, 1694
BmuI	ACTGGG	1 cut(s)	424
BpmI	CTGGAG	1 cut(s)	457
Bpu10I	CCTNAGC	1 cut(s)	1059
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaHI	GRCGYC	1 cut(s)	1739
BsaI	GGTCTC	1 cut(s)	1471
BsaJI	CCNNGG	5 cut(s)	363, 508, 760, 1694, 1805
BsaWI	WCCGGW	2 cut(s)	621, 796
Bsc4I	CCNNNNNNNGG	7 cut(s)	435, 783, 1141, 1199, 1700, 1806, 1811
Bse118I	RCCGGY	1 cut(s)	61
Bse1I	ACTGG	3 cut(s)	278, 430, 536
Bse3DI	GCAATG	3 cut(s)	95, 814, 851
Bse8I	GATNNNNATC	1 cut(s)	1143
BseAI	TCCGGA	1 cut(s)	796
BseBI	CCWGG	2 cut(s)	236, 509
BseDI	CCNNGG	5 cut(s)	363, 508, 760, 1694, 1805
BseGI	GGATG	5 cut(s)	340, 505, 805, 1481, 1816
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	7 cut(s)	435, 783, 1141, 1199, 1700, 1806, 1811
BseMI	GCAATG	3 cut(s)	95, 814, 851
BseMII	CTCAG	4 cut(s)	1050, 1344, 1466, 1482
BseNI	ACTGG	3 cut(s)	278, 430, 536
BsePI	GCGCGC	1 cut(s)	1178
BseRI	GAGGAG	1 cut(s)	1635
BseSI	GKGCMC	2 cut(s)	1007, 1457
BseXI	GCAGC	5 cut(s)	936, 1817, 1833, 1852, 1855
BseYI	CCCAGC	1 cut(s)	482
Bsh1236I	CGCG	1 cut(s)	1180
BshFI	GGCC	7 cut(s)	234, 239, 362, 617, 725, 759, 1364
BshNI	GGYRCC	1 cut(s)	1004
BsiHKAI	GWGCWC	1 cut(s)	1457
BsiHKCI	CYCGRG	3 cut(s)	494, 745, 1280
BsiSI	CCGG	3 cut(s)	62, 622, 797
BslFI	GGGAC	1 cut(s)	1124
BslI	CCNNNNNNNGG	7 cut(s)	435, 783, 1141, 1199, 1700, 1806, 1811
BsmAI	GTCTC	4 cut(s)	600, 1471, 1632, 1746
BsmBI	CGTCTC	1 cut(s)	1746
BsmFI	GGGAC	1 cut(s)	1124
BsmI	GAATGC	3 cut(s)	1527, 1564, 1736
BsnI	GGCC	7 cut(s)	234, 239, 362, 617, 725, 759, 1364
Bso31I	GGTCTC	1 cut(s)	1471
BsoBI	CYCGRG	3 cut(s)	494, 745, 1280
Bsp1286I	GDGCHC	2 cut(s)	1007, 1457
Bsp13I	TCCGGA	1 cut(s)	796
Bsp143I	GATC	6 cut(s)	250, 541, 982, 1144, 1589, 1642
BspACI	CCGC	5 cut(s)	765, 1089, 1638, 1797, 1800
BspANI	GGCC	7 cut(s)	234, 239, 362, 617, 725, 759, 1364
BspCNI	CTCAG	4 cut(s)	1051, 1343, 1467, 1483
BspEI	TCCGGA	1 cut(s)	796
BspFNI	CGCG	1 cut(s)	1180
BspLI	GGNNCC	4 cut(s)	66, 775, 1006, 1212
BspMAI	CTGCAG	2 cut(s)	1835, 1851
BspMI	ACCTGC	1 cut(s)	1824
BspPI	GGATC	1 cut(s)	1152
BspT107I	GGYRCC	1 cut(s)	1004
BspTNI	GGTCTC	1 cut(s)	1471
BsrDI	GCAATG	3 cut(s)	95, 814, 851
BsrFI	RCCGGY	1 cut(s)	61
BsrI	ACTGG	3 cut(s)	278, 430, 536
BssAI	RCCGGY	1 cut(s)	61
BssECI	CCNNGG	5 cut(s)	363, 508, 760, 1694, 1805
BssHII	GCGCGC	1 cut(s)	1178
BssMI	GATC	6 cut(s)	250, 541, 982, 1144, 1589, 1642
BssNI	GRCGYC	1 cut(s)	1739
BssT1I	CCWWGG	3 cut(s)	760, 1694, 1805
Bst2UI	CCWGG	2 cut(s)	236, 509
Bst4CI	ACNGT	3 cut(s)	20, 119, 197
Bst6I	CTCTTC	2 cut(s)	798, 833
BstACI	GRCGYC	1 cut(s)	1739
BstAPI	GCANNNNNTGC	1 cut(s)	1846
BstDEI	CTNAG	5 cut(s)	1059, 1330, 1475, 1491, 1860
BstENI	CCTNNNNNAGG	1 cut(s)	1139
BstF5I	GGATG	5 cut(s)	340, 505, 805, 1481, 1816
BstFNI	CGCG	1 cut(s)	1180
BstHHI	GCGC	3 cut(s)	88, 1180, 1182
BstKTI	GATC	6 cut(s)	253, 544, 985, 1147, 1592, 1645
BstMAI	GTCTC	4 cut(s)	600, 1471, 1632, 1746
BstMBI	GATC	6 cut(s)	250, 541, 982, 1144, 1589, 1642
BstMWI	GCNNNNNNNGC	7 cut(s)	513, 532, 690, 1469, 1646, 1846, 1849
BstNI	CCWGG	2 cut(s)	236, 509
BstNSI	RCATGY	2 cut(s)	554, 1507
BstSCI	CCNGG	2 cut(s)	234, 507
BstSFI	CTRYAG	3 cut(s)	1357, 1831, 1847
BstSLI	GKGCMC	2 cut(s)	1007, 1457
BstUI	CGCG	1 cut(s)	1180
BstV1I	GCAGC	5 cut(s)	936, 1817, 1833, 1852, 1855
BstX2I	RGATCY	2 cut(s)	1144, 1589
BstYI	RGATCY	2 cut(s)	1144, 1589
BsuRI	GGCC	7 cut(s)	234, 239, 362, 617, 725, 759, 1364
BtsCI	GGATG	5 cut(s)	340, 505, 805, 1481, 1816
BtsIMutI	CAGTG	3 cut(s)	25, 437, 1472
BveI	ACCTGC	1 cut(s)	1824
CaiI	CAGNNNCTG	1 cut(s)	1846
CfoI	GCGC	3 cut(s)	88, 1180, 1182
Cfr10I	RCCGGY	1 cut(s)	61
Cfr13I	GGNCC	6 cut(s)	232, 238, 441, 935, 1190, 1362
Csp6I	GTAC	4 cut(s)	706, 965, 1408, 1433
CviAII	CATG	9 cut(s)	221, 304, 551, 1079, 1307, 1393, 1486, 1504, 1717
CviQI	GTAC	4 cut(s)	706, 965, 1408, 1433
DdeI	CTNAG	5 cut(s)	1059, 1330, 1475, 1491, 1860
DpnI	GATC	6 cut(s)	252, 543, 984, 1146, 1591, 1644
DpnII	GATC	6 cut(s)	250, 541, 982, 1144, 1589, 1642
EaeI	YGGCCR	1 cut(s)	757
Eam1104I	CTCTTC	2 cut(s)	798, 833
EarI	CTCTTC	2 cut(s)	798, 833
EciI	GGCGGA	2 cut(s)	780, 1627
Eco130I	CCWWGG	3 cut(s)	760, 1694, 1805
Eco31I	GGTCTC	1 cut(s)	1471
Eco32I	GATATC	1 cut(s)	669
Eco47I	GGWCC	3 cut(s)	441, 935, 1190
Eco57I	CTGAAG	2 cut(s)	159, 1845
Eco88I	CYCGRG	3 cut(s)	494, 745, 1280
EcoNI	CCTNNNNNAGG	1 cut(s)	1139
EcoO109I	RGGNCCY	1 cut(s)	238
EcoRI	GAATTC	1 cut(s)	1704
EcoRII	CCWGG	2 cut(s)	234, 507
EcoRV	GATATC	1 cut(s)	669
EcoT14I	CCWWGG	3 cut(s)	760, 1694, 1805
EcoT22I	ATGCAT	1 cut(s)	424
ErhI	CCWWGG	3 cut(s)	760, 1694, 1805
Esp3I	CGTCTC	1 cut(s)	1746
FaeI	CATG	9 cut(s)	224, 307, 554, 1082, 1310, 1396, 1489, 1507, 1720
FalI	AAGNNNNNCTT	4 cut(s)	677, 709, 1452, 1484
FaqI	GGGAC	1 cut(s)	1124
FatI	CATG	9 cut(s)	220, 303, 550, 1078, 1306, 1392, 1485, 1503, 1716
FbaI	TGATCA	1 cut(s)	982
Fnu4HI	GCNGC	8 cut(s)	925, 1090, 1800, 1831, 1841, 1844, 1847, 1850
FokI	GGATG	5 cut(s)	347, 512, 812, 1468, 1823
Fsp4HI	GCNGC	8 cut(s)	925, 1090, 1800, 1831, 1841, 1844, 1847, 1850
FspBI	CTAG	4 cut(s)	557, 950, 1587, 1646
FspI	TGCGCA	1 cut(s)	87
GlaI	GCGC	3 cut(s)	87, 1179, 1181
GluI	GCNGC	8 cut(s)	925, 1090, 1800, 1831, 1841, 1844, 1847, 1850
GsaI	CCCAGC	1 cut(s)	486
GsuI	CTGGAG	1 cut(s)	457
HaeIII	GGCC	7 cut(s)	234, 239, 362, 617, 725, 759, 1364
HapII	CCGG	3 cut(s)	62, 622, 797
HhaI	GCGC	3 cut(s)	88, 1180, 1182
Hin1I	GRCGYC	1 cut(s)	1739
Hin1II	CATG	9 cut(s)	224, 307, 554, 1082, 1310, 1396, 1489, 1507, 1720
Hin6I	GCGC	3 cut(s)	86, 1178, 1180
HinP1I	GCGC	3 cut(s)	86, 1178, 1180
HincII	GTYRAC	1 cut(s)	25
HindII	GTYRAC	1 cut(s)	25
HindIII	AAGCTT	1 cut(s)	1461
HinfI	GANTC	8 cut(s)	5, 274, 490, 825, 1379, 1580, 1625, 1658
HpaII	CCGG	3 cut(s)	62, 622, 797
HphI	GGTGA	3 cut(s)	46, 51, 1527
Hpy166II	GTNNAC	7 cut(s)	25, 103, 649, 874, 1325, 1455, 1501
Hpy188I	TCNGA	6 cut(s)	291, 1414, 1492, 1579, 1690, 1746
Hpy8I	GTNNAC	7 cut(s)	25, 103, 649, 874, 1325, 1455, 1501
Hpy99I	CGWCG	3 cut(s)	197, 248, 1741
HpyAV	CCTTC	8 cut(s)	177, 301, 352, 368, 926, 956, 1542, 1820
HpyCH4III	ACNGT	3 cut(s)	20, 119, 197
HpyCH4IV	ACGT	3 cut(s)	321, 1041, 1739
HpyCH4V	TGCA	8 cut(s)	422, 924, 1072, 1455, 1472, 1833, 1840, 1849
HpyF10VI	GCNNNNNNNGC	7 cut(s)	513, 532, 690, 1469, 1646, 1846, 1849
HpyF3I	CTNAG	5 cut(s)	1059, 1330, 1475, 1491, 1860
HpySE526I	ACGT	3 cut(s)	321, 1041, 1739
Hsp92I	GRCGYC	1 cut(s)	1739
Hsp92II	CATG	9 cut(s)	224, 307, 554, 1082, 1310, 1396, 1489, 1507, 1720
HspAI	GCGC	3 cut(s)	86, 1178, 1180
Kpn2I	TCCGGA	1 cut(s)	796
Ksp22I	TGATCA	1 cut(s)	982
Kzo9I	GATC	6 cut(s)	250, 541, 982, 1144, 1589, 1642
LmnI	GCTCC	6 cut(s)	70, 156, 767, 804, 1216, 1857
Lsp1109I	GCAGC	5 cut(s)	936, 1817, 1833, 1852, 1855
LweI	GCATC	6 cut(s)	60, 192, 490, 1081, 1378, 1694
MaeI	CTAG	4 cut(s)	557, 950, 1587, 1646
MaeII	ACGT	3 cut(s)	321, 1041, 1739
MaeIII	GTNAC	1 cut(s)	1792
MalI	GATC	6 cut(s)	252, 543, 984, 1146, 1591, 1644
MboI	GATC	6 cut(s)	250, 541, 982, 1144, 1589, 1642
MfeI	CAATTG	1 cut(s)	660
MflI	RGATCY	2 cut(s)	1144, 1589
MhlI	GDGCHC	2 cut(s)	1007, 1457
MlsI	TGGCCA	1 cut(s)	759
MluNI	TGGCCA	1 cut(s)	759
MlyI	GAGTC	3 cut(s)	283, 819, 1634
MmeI	TCCRAC	1 cut(s)	39
Mox20I	TGGCCA	1 cut(s)	759
Mph1103I	ATGCAT	1 cut(s)	424
MroI	TCCGGA	1 cut(s)	796
MroXI	GAANNNNTTC	1 cut(s)	945
MscI	TGGCCA	1 cut(s)	759
MseI	TTAA	5 cut(s)	318, 819, 1019, 1038, 1572
MslI	CAYNNNNRTG	1 cut(s)	1077
Msp20I	TGGCCA	1 cut(s)	759
MspA1I	CMGCKG	1 cut(s)	1846
MspI	CCGG	3 cut(s)	62, 622, 797
MspR9I	CCNGG	2 cut(s)	236, 509
MunI	CAATTG	1 cut(s)	660
Mva1269I	GAATGC	3 cut(s)	1527, 1564, 1736
MvaI	CCWGG	2 cut(s)	236, 509
MvnI	CGCG	1 cut(s)	1180
MwoI	GCNNNNNNNGC	7 cut(s)	513, 532, 690, 1469, 1646, 1846, 1849
NdeII	GATC	6 cut(s)	250, 541, 982, 1144, 1589, 1642
NlaIII	CATG	9 cut(s)	224, 307, 554, 1082, 1310, 1396, 1489, 1507, 1720
NlaIV	GGNNCC	4 cut(s)	66, 775, 1006, 1212
NmeAIII	GCCGAG	1 cut(s)	388
NsbI	TGCGCA	1 cut(s)	87
NsiI	ATGCAT	1 cut(s)	424
NspI	RCATGY	2 cut(s)	554, 1507
PaeR7I	CTCGAG	2 cut(s)	745, 1280
PauI	GCGCGC	1 cut(s)	1178
PctI	GAATGC	3 cut(s)	1527, 1564, 1736
PdmI	GAANNNNTTC	1 cut(s)	945
PfeI	GAWTC	5 cut(s)	5, 490, 1379, 1580, 1658
PflMI	CCANNNNNTGG	1 cut(s)	1700
PkrI	GCNGC	8 cut(s)	926, 1091, 1801, 1832, 1842, 1845, 1848, 1851
PleI	GAGTC	3 cut(s)	282, 819, 1633
PpsI	GAGTC	3 cut(s)	282, 819, 1633
PsiI	TTATAA	3 cut(s)	344, 611, 1350
Psp6I	CCWGG	2 cut(s)	234, 507
PspFI	CCCAGC	1 cut(s)	482
PspGI	CCWGG	2 cut(s)	234, 507
PspN4I	GGNNCC	4 cut(s)	66, 775, 1006, 1212
PspPI	GGNCC	6 cut(s)	232, 238, 441, 935, 1190, 1362
PspXI	VCTCGAGB	1 cut(s)	745
PstI	CTGCAG	2 cut(s)	1835, 1851
PstNI	CAGNNNCTG	1 cut(s)	1846
PsuI	RGATCY	2 cut(s)	1144, 1589
PteI	GCGCGC	1 cut(s)	1178
PvuII	CAGCTG	1 cut(s)	1846
RsaI	GTAC	4 cut(s)	707, 966, 1409, 1434
RsaNI	GTAC	4 cut(s)	706, 965, 1408, 1433
RseI	CAYNNNNRTG	1 cut(s)	1077
SaqAI	TTAA	5 cut(s)	318, 819, 1019, 1038, 1572
SatI	GCNGC	8 cut(s)	925, 1090, 1800, 1831, 1841, 1844, 1847, 1850
Sau3AI	GATC	6 cut(s)	250, 541, 982, 1144, 1589, 1642
Sau96I	GGNCC	6 cut(s)	232, 238, 441, 935, 1190, 1362
SchI	GAGTC	3 cut(s)	283, 819, 1634
ScrFI	CCNGG	2 cut(s)	236, 509
SduI	GDGCHC	2 cut(s)	1007, 1457
SfaNI	GCATC	6 cut(s)	60, 192, 490, 1081, 1378, 1694
SfcI	CTRYAG	3 cut(s)	1357, 1831, 1847
Sfr274I	CTCGAG	2 cut(s)	745, 1280
SinI	GGWCC	3 cut(s)	441, 935, 1190
SlaI	CTCGAG	2 cut(s)	745, 1280
SmiMI	CAYNNNNRTG	1 cut(s)	1077
SmlI	CTYRAG	2 cut(s)	745, 1280
SmoI	CTYRAG	2 cut(s)	745, 1280
SsiI	CCGC	5 cut(s)	765, 1089, 1638, 1797, 1800
SspMI	CTAG	4 cut(s)	557, 950, 1587, 1646
StyD4I	CCNGG	2 cut(s)	234, 507
StyI	CCWWGG	3 cut(s)	760, 1694, 1805
TaaI	ACNGT	3 cut(s)	20, 119, 197
TaiI	ACGT	3 cut(s)	324, 1044, 1742
TaqI	TCGA	9 cut(s)	140, 192, 243, 282, 746, 892, 1228, 1281, 1317
TaqII	GACCGA	1 cut(s)	1526
TatI	WGTACW	1 cut(s)	1432
TauI	GCSGC	2 cut(s)	1092, 1802
TfiI	GAWTC	5 cut(s)	5, 490, 1379, 1580, 1658
Tru1I	TTAA	5 cut(s)	318, 819, 1019, 1038, 1572
Tru9I	TTAA	5 cut(s)	318, 819, 1019, 1038, 1572
TscAI	CASTG	3 cut(s)	25, 437, 1479
TseI	GCWGC	6 cut(s)	924, 1830, 1840, 1843, 1846, 1849
TspDTI	ATGAA	6 cut(s)	320, 387, 882, 972, 1095, 1700
TspGWI	ACGGA	2 cut(s)	88, 766
TspRI	CASTG	3 cut(s)	25, 437, 1479
Van91I	CCANNNNNTGG	1 cut(s)	1700
VneI	GTGCAC	1 cut(s)	1453
VpaK11BI	GGWCC	3 cut(s)	441, 935, 1190
XagI	CCTNNNNNAGG	1 cut(s)	1139
XapI	RAATTY	2 cut(s)	697, 1704
XbaI	TCTAGA	1 cut(s)	1586
XceI	RCATGY	2 cut(s)	554, 1507
XcmI	CCANNNNNNNNNTGG	1 cut(s)	767
XhoI	CTCGAG	2 cut(s)	745, 1280
XmnI	GAANNNNTTC	1 cut(s)	945
XspI	CTAG	4 cut(s)	557, 950, 1587, 1646
ZraI	GACGTC	1 cut(s)	1740
Zsp2I	ATGCAT	1 cut(s)	424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.