Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001832

Physical Location & Seq

Genomic Coordinates Forward (+)

81090515 .. 81093345

Gene Structure 2831 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022121

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGCATACCAAAACCTCAACATGGCTCTTCTTCTTCTTCTTCTTCATCTTCTTTTCGCTTTTCTACCTCTTTCTCTGTGATCCCAGAACCTCGGAAGCTGGCCTCTACTGCGGAGCTGCCAAGCCACCACCAAACGCTAGCTTCATTCCAACTTTTGTCGCAGAAATGGAGAGTTTATCACAGCTCATCACCAAACACCACTGGGGCACCCACTTCTTTAACTCCACGCCCCCCATGTACGGCCTAGCGCAATGCTACAACGACCTGTCGCACACTGATTGTCTTCTCTGCTACGCCGCCAGCCGCACCGAGATCCCCCGCTGCCTCCCCTCCCTCTCCGCCCGCATCTTTCTCGACGGCTGCTTCCTCCGCTACGACAACTACAGCTTCTACTCCGAAGCTTCCGTCCCCGCCGTCGACTCCGTTGTCTGCGGCCAAGAAGAGGCGGCGGACGCGGCGGTGTTTAAGGAGAACGTTGCGGAGGTGATTGAGAGGGTTAAGAGGTCCGCGGCGGAGAACGGGGGATTTGGGGTAGGGGAAGTGGGTGGGGAGGTGTATGCTTTGGGGCAGTGCTGGAAGACGGTGGATGGTGATGGGTGTAGAGAATGCTTGGAGGAGGGAGGTGAGGCGGTGAGAGGATGTGGGTTGAAGACAGAAGGCAAGGCTTTGAATGCTGGATGTTACTTGAGGTATTCGACTCGGAAGTTCTATAATGACGAGGGGGAAGCAGAGCATGAGCATGGGTTTACAGATAGAAGGGGAATCATCATAGCAATTGTTTTGGGAGCAGTTGCTTTCACAATGCTGTCTCTCTTTGCTGCTTATGCAGGCTATACAAAGCTGGTGCAGATCAGAAAAGAGTGCAGTAATCTAGGCTTGGTGTCAATAAGCATTAGCAAGTATTCTGGCTTGAGTTTCAAGTATGAAACACTCGAGAAGGCCACAGATTATTTTAACACCTCGAGAAAAATAGGGGAAGGGGGAGGTGGTACTGTGTTTAAAGGGACTCTTCCGAATGGAAAAACCGTAGCTGTTAAGAGATTGTTCTACAATACCAGGCAATGGGTAGATGAGTTCTTCAATGAGGTGAATTTGATCAGTGGAATTCAGCACAAGCACCTAGTGAAGCTTTTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTGCTGGTGTATGAATATGTGCCTAACAGGAGCCTCGATCAATTCCTTTTCGATAAGAACAATGATCAGTTTCTTAACTGGAAGCAGCGGTTTGATATTATTGTCGGAACAGCTGAAGGGATTGCGTATCTTCATGAAGGTTCTAAAGTAAGAATAATCCACAGGGACATAAAAAGCAGCAATATTCTTCTGGATGAGAATCTCAGCCCCAAAATTGCCGACTTTGGCCTAGCTCGGTGTTTTGCTTCAGACAAGTCTCATCTTAGCACCGGCATTGCTGGAACACTAGGTTATATGGCCCCAGAGTATCTTGTTCAAGGGCAACTTACAGAGAAAGCAGACGTTTATAGCTTCGGAGTGCTAGTTCTCGAGATTGTGTCTGGTATGAGGAATAGCAACTTCAAACAGGCGGACACTGACTTTGATTCACTACTACACAAAGTTTGGAAACACTACAGATCAAACGAGTTGGCCGACGTGGTTGATCCTTGCTTGAGAGATCATGAGTTGCCAGCAAAAGAGGTATCAAATGTTCTTCAAATTGGACTTCTGTGCACACAGGCCTCAGTTGCTTTGAGACCATCTATGGCTGAAGTAGTTCTAATGCTAACAGCCAACAAAGAAAGTGACATTCCCATTCCAAACCAACCTCCCTTTCTAAATGCCACGACGCTAGAGCAAGCCAGCTTCATTAGGTCTAATAGCGCAAATAGCTTCGTCTCAAATACTTTAACGAAAGTTGAGACGTCCTACACCTCATCAGAGTCTTCCACCAAGCCTAGTTTGGATAATATGGGACATATATCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

659

Amino Acids

72.94

Weight (kDa)

5.73

Isoelectric Point (pI)

33.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	47 - 128	3.3e-11	Salt stress response/antifungal
Stress-antifung	PF01657	144 - 233	1.6e-11	Salt stress response/antifungal
Pkinase	PF00069	318 - 541	1.7e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	320 - 588	2.7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40380 AT5G40380 AT5G40380
fragaria_vesca	FvH4_4g26070 FvH4_5g05520 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060 FvH4_6g51060
malus_domestica	MD14G1177300.v1.1 MD17G1031100.v1.1
prunus_persica	Prupe.3G288600_v2.0.a1 Prupe.5G171200_v2.0.a1
pyrus_communis	pycom14g14810 pycom17g02850
rosa_chinensis	RchiOBHm_Chr2g0089301 RchiOBHm_Chr2g0172611 RchiOBHm_Chr7g0193291
rosa_laevigata	RLG00000004281 RLG00000022120 RLG00000022121 RLG00000022125
rosa_multiflora	Rmu_co8025498.1_g000001 Rmu_sc0017093.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079690 Rroxscaffold_2G00079700 Rroxscaffold_3G00262230
rosa_rugosa	Rorug01G0488900 Rorug02G0246100 Rorug02G0560300 Rorug02G0560400 Rorug07G0008700
rosa_samantha	Rh2AG636700 Rh2AG636900 Rh2BG650100 Rh2BG650300 Rh2CG616800 Rh2CG616900 Rh2DG664300 Rh2DG664400 Rh7BG135300 Rh7CG138300 Rh7DG136300
rosa_wichuraiana	Rw2G052660 Rw2G052670 Rw7G011490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	425
AatII	GACGTC	1 cut(s)	1910
AccB1I	GGYRCC	1 cut(s)	206
AccB7I	CCANNNNNTGG	1 cut(s)	1062
AccI	GTMKAC	1 cut(s)	417
AccII	CGCG	2 cut(s)	455, 509
AclI	AACGTT	1 cut(s)	474
AclWI	GGATC	3 cut(s)	74, 307, 1640
AcoI	YGGCCR	2 cut(s)	433, 1632
AcsI	RAATTY	2 cut(s)	1090, 1104
AcuI	CTGAAG	3 cut(s)	1296, 1392, 1773
AcyI	GRCGYC	1 cut(s)	1907
AdeI	CACNNNGTG	1 cut(s)	1123
AfaI	GTAC	2 cut(s)	239, 991
AfiI	CCNNNNNNNGG	4 cut(s)	21, 239, 442, 1062
AgsI	TTSAA	8 cut(s)	649, 670, 919, 1081, 1148, 1478, 1564, 1700
AjiI	CACGTC	1 cut(s)	1639
AjnI	CCWGG	1 cut(s)	1055
AjuI	GAANNNNNNNTTGG	2 cut(s)	1800, 1832
AloI	GAACNNNNNNTCC	2 cut(s)	1509, 1541
Alw21I	GWGCWC	1 cut(s)	1718
Alw26I	GTCTC	5 cut(s)	813, 1422, 1732, 1885, 1898
Alw44I	GTGCAC	1 cut(s)	1714
AlwI	GGATC	3 cut(s)	74, 307, 1640
Ama87I	CYCGRG	3 cut(s)	932, 961, 1529
AoxI	GGCC	9 cut(s)	100, 241, 433, 939, 1150, 1387, 1458, 1632, 1722
ApaLI	GTGCAC	1 cut(s)	1714
ApeKI	GCWGC	6 cut(s)	116, 321, 360, 818, 1246, 1338
ApoI	RAATTY	2 cut(s)	1090, 1104
ArsI	GACNNNNNNTTYG	4 cut(s)	390, 422, 1565, 1597
Asp700I	GAANNNNTTC	1 cut(s)	1758
AspLEI	GCGC	2 cut(s)	250, 1868
AspS9I	GGNCC	3 cut(s)	504, 1151, 1459
AsuHPI	GGTGA	6 cut(s)	181, 496, 602, 635, 643, 1099
AsuNHI	GCTAGC	1 cut(s)	137
AvaI	CYCGRG	3 cut(s)	932, 961, 1529
AvaII	GGWCC	1 cut(s)	504
BaeGI	GKGCMC	2 cut(s)	209, 1718
BanI	GGYRCC	1 cut(s)	206
BbsI	GAAGAC	4 cut(s)	275, 584, 656, 1920
Bbv12I	GWGCWC	1 cut(s)	1718
BbvI	GCAGC	6 cut(s)	103, 308, 347, 805, 1258, 1350
BccI	CCATC	3 cut(s)	581, 587, 1750
BceAI	ACGGC	3 cut(s)	256, 373, 398
BcgI	CGANNNNNNTGC	2 cut(s)	334, 368
BciT130I	CCWGG	1 cut(s)	1057
BclI	TGATCA	2 cut(s)	1095, 1225
BcoDI	GTCTC	5 cut(s)	813, 1422, 1732, 1885, 1898
BfaI	CTAG	9 cut(s)	138, 245, 872, 1121, 1391, 1448, 1523, 1835, 1941
BfmI	CTRYAG	2 cut(s)	382, 1615
Bme1390I	CCNGG	1 cut(s)	1057
Bme18I	GGWCC	1 cut(s)	504
BmeT110I	CYCGRG	3 cut(s)	932, 961, 1529
BmgBI	CACGTC	1 cut(s)	1639
BmgT120I	GGNCC	3 cut(s)	504, 1151, 1459
BmiI	GGNNCC	3 cut(s)	208, 1193, 1461
BmrFI	CCNGG	1 cut(s)	1057
BmrI	ACTGGG	1 cut(s)	211
BmsI	GCATC	1 cut(s)	354
BmtI	GCTAGC	1 cut(s)	141
BmuI	ACTGGG	1 cut(s)	211
BpiI	GAAGAC	4 cut(s)	275, 584, 656, 1920
BpuEI	CTTGAG	3 cut(s)	706, 931, 1675
BsaBI	GATNNNNATC	1 cut(s)	1359
BsaHI	GRCGYC	1 cut(s)	1907
BsaI	GGTCTC	1 cut(s)	1732
BsaJI	CCNNGG	2 cut(s)	90, 507
BsaXI	ACNNNNNCTCC	2 cut(s)	1509, 1539
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 239, 442, 1062
Bse118I	RCCGGY	1 cut(s)	1430
Bse1I	ACTGG	2 cut(s)	206, 1244
Bse3DI	GCAATG	3 cut(s)	257, 1067, 1434
Bse8I	GATNNNNATC	1 cut(s)	1359
BseBI	CCWGG	1 cut(s)	1057
BseDI	CCNNGG	2 cut(s)	90, 507
BseGI	GGATG	4 cut(s)	592, 644, 683, 1360
BseJI	GATNNNNATC	1 cut(s)	1359
BseLI	CCNNNNNNNGG	4 cut(s)	21, 239, 442, 1062
BseMI	GCAATG	3 cut(s)	257, 1067, 1434
BseMII	CTCAG	3 cut(s)	1146, 1378, 1740
BseNI	ACTGG	2 cut(s)	206, 1244
BseRI	GAGGAG	1 cut(s)	629
BseSI	GKGCMC	2 cut(s)	209, 1718
BseXI	GCAGC	6 cut(s)	103, 308, 347, 805, 1258, 1350
BsgI	GTGCAG	2 cut(s)	866, 883
Bsh1236I	CGCG	2 cut(s)	455, 509
BshFI	GGCC	9 cut(s)	102, 243, 435, 941, 1152, 1389, 1460, 1634, 1724
BshNI	GGYRCC	1 cut(s)	206
BsiHKAI	GWGCWC	1 cut(s)	1718
BsiHKCI	CYCGRG	3 cut(s)	932, 961, 1529
BsiSI	CCGG	1 cut(s)	1431
BslFI	GGGAC	4 cut(s)	392, 1018, 1340, 1971
BslI	CCNNNNNNNGG	4 cut(s)	21, 239, 442, 1062
BsmAI	GTCTC	5 cut(s)	813, 1422, 1732, 1885, 1898
BsmBI	CGTCTC	2 cut(s)	1885, 1898
BsmFI	GGGAC	4 cut(s)	392, 1018, 1340, 1971
BsmI	GAATGC	2 cut(s)	611, 676
BsnI	GGCC	9 cut(s)	102, 243, 435, 941, 1152, 1389, 1460, 1634, 1724
Bso31I	GGTCTC	1 cut(s)	1732
BsoBI	CYCGRG	3 cut(s)	932, 961, 1529
Bsp1286I	GDGCHC	2 cut(s)	209, 1718
Bsp143I	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
BspANI	GGCC	9 cut(s)	102, 243, 435, 941, 1152, 1389, 1460, 1634, 1724
BspCNI	CTCAG	3 cut(s)	1147, 1377, 1739
BspFNI	CGCG	2 cut(s)	455, 509
BspHI	TCATGA	2 cut(s)	1294, 1663
BspLI	GGNNCC	3 cut(s)	208, 1193, 1461
BspOI	GCTAGC	1 cut(s)	141
BspPI	GGATC	3 cut(s)	74, 307, 1640
BspQI	GCTCTTC	1 cut(s)	32
BspT107I	GGYRCC	1 cut(s)	206
BspTNI	GGTCTC	1 cut(s)	1732
BsrDI	GCAATG	3 cut(s)	257, 1067, 1434
BsrFI	RCCGGY	1 cut(s)	1430
BsrI	ACTGG	2 cut(s)	206, 1244
BssAI	RCCGGY	1 cut(s)	1430
BssECI	CCNNGG	2 cut(s)	90, 507
BssMI	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
BssNI	GRCGYC	1 cut(s)	1907
Bst2UI	CCWGG	1 cut(s)	1057
Bst4CI	ACNGT	3 cut(s)	583, 994, 1027
Bst6I	CTCTTC	3 cut(s)	32, 435, 1014
BstACI	GRCGYC	1 cut(s)	1907
BstC8I	GCNNGC	9 cut(s)	100, 139, 301, 343, 829, 1163, 1674, 1842, 1846
BstDEI	CTNAG	4 cut(s)	1155, 1364, 1424, 1726
BstDSI	CCRYGG	1 cut(s)	507
BstF5I	GGATG	4 cut(s)	592, 644, 683, 1360
BstFNI	CGCG	2 cut(s)	455, 509
BstHHI	GCGC	2 cut(s)	250, 1868
BstKTI	GATC	9 cut(s)	82, 315, 852, 1098, 1201, 1228, 1622, 1648, 1663
BstMAI	GTCTC	5 cut(s)	813, 1422, 1732, 1885, 1898
BstMBI	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
BstNI	CCWGG	1 cut(s)	1057
BstSCI	CCNGG	1 cut(s)	1055
BstSFI	CTRYAG	2 cut(s)	382, 1615
BstSLI	GKGCMC	2 cut(s)	209, 1718
BstUI	CGCG	2 cut(s)	455, 509
BstV1I	GCAGC	6 cut(s)	103, 308, 347, 805, 1258, 1350
BstV2I	GAAGAC	4 cut(s)	275, 584, 656, 1920
BstX2I	RGATCY	1 cut(s)	312
BstYI	RGATCY	1 cut(s)	312
BsuRI	GGCC	9 cut(s)	102, 243, 435, 941, 1152, 1389, 1460, 1634, 1724
BtgI	CCRYGG	1 cut(s)	507
BtrI	CACGTC	1 cut(s)	1639
BtsCI	GGATG	4 cut(s)	592, 644, 683, 1360
BtsI	GCAGTG	1 cut(s)	575
BtsIMutI	CAGTG	5 cut(s)	199, 273, 575, 1105, 1575
Cac8I	GCNNGC	9 cut(s)	100, 139, 301, 343, 829, 1163, 1674, 1842, 1846
CciI	TCATGA	2 cut(s)	1294, 1663
CfoI	GCGC	2 cut(s)	250, 1868
Cfr10I	RCCGGY	1 cut(s)	1430
Cfr13I	GGNCC	3 cut(s)	504, 1151, 1459
Cfr42I	CCGCGG	1 cut(s)	510
CseI	GACGC	2 cut(s)	461, 1840
Csp6I	GTAC	2 cut(s)	238, 990
CviAII	CATG	6 cut(s)	21, 235, 734, 740, 1295, 1664
CviQI	GTAC	2 cut(s)	238, 990
DdeI	CTNAG	4 cut(s)	1155, 1364, 1424, 1726
DpnI	GATC	9 cut(s)	81, 314, 851, 1097, 1200, 1227, 1621, 1647, 1662
DpnII	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
DraI	TTTAAA	1 cut(s)	1000
DraIII	CACNNNGTG	1 cut(s)	1123
DrdI	GACNNNNNNGTC	1 cut(s)	425
DseDI	GACNNNNNNGTC	1 cut(s)	425
EaeI	YGGCCR	2 cut(s)	433, 1632
Eam1104I	CTCTTC	3 cut(s)	32, 435, 1014
EarI	CTCTTC	3 cut(s)	32, 435, 1014
EciI	GGCGGA	4 cut(s)	328, 464, 527, 1586
Eco147I	AGGCCT	1 cut(s)	1724
Eco31I	GGTCTC	1 cut(s)	1732
Eco47I	GGWCC	1 cut(s)	504
Eco57I	CTGAAG	3 cut(s)	1296, 1392, 1773
Eco88I	CYCGRG	3 cut(s)	932, 961, 1529
EcoO109I	RGGNCCY	1 cut(s)	1151
EcoRI	GAATTC	1 cut(s)	1104
EcoRII	CCWGG	1 cut(s)	1055
EcoT22I	ATGCAT	1 cut(s)	6
Esp3I	CGTCTC	2 cut(s)	1885, 1898
FaeI	CATG	6 cut(s)	24, 238, 737, 743, 1298, 1667
FalI	AAGNNNNNCTT	4 cut(s)	993, 1025, 1470, 1502
FaqI	GGGAC	4 cut(s)	392, 1018, 1340, 1971
FatI	CATG	6 cut(s)	20, 234, 733, 739, 1294, 1663
FauI	CCCGC	3 cut(s)	326, 350, 418
FbaI	TGATCA	2 cut(s)	1095, 1225
FblI	GTMKAC	1 cut(s)	417
FokI	GGATG	4 cut(s)	599, 651, 690, 1367
FspBI	CTAG	9 cut(s)	138, 245, 872, 1121, 1391, 1448, 1523, 1835, 1941
GlaI	GCGC	2 cut(s)	249, 1867
HaeIII	GGCC	9 cut(s)	102, 243, 435, 941, 1152, 1389, 1460, 1634, 1724
HapII	CCGG	1 cut(s)	1431
HgaI	GACGC	2 cut(s)	461, 1840
HhaI	GCGC	2 cut(s)	250, 1868
Hin1I	GRCGYC	1 cut(s)	1907
Hin1II	CATG	6 cut(s)	24, 238, 737, 743, 1298, 1667
Hin6I	GCGC	2 cut(s)	248, 1866
HinP1I	GCGC	2 cut(s)	248, 1866
HincII	GTYRAC	1 cut(s)	418
HindII	GTYRAC	1 cut(s)	418
HindIII	AAGCTT	2 cut(s)	399, 1127
HinfI	GANTC	7 cut(s)	419, 697, 762, 1006, 1360, 1586, 1925
HpaII	CCGG	1 cut(s)	1431
HphI	GGTGA	6 cut(s)	181, 496, 602, 635, 643, 1099
Hpy166II	GTNNAC	3 cut(s)	418, 747, 1716
Hpy188I	TCNGA	9 cut(s)	94, 397, 702, 854, 1014, 1268, 1411, 1517, 1924
Hpy188III	TCNNGA	8 cut(s)	353, 934, 963, 1295, 1352, 1529, 1531, 1664
Hpy8I	GTNNAC	3 cut(s)	418, 747, 1716
Hpy99I	CGWCG	4 cut(s)	359, 419, 1640, 1834
HpyAV	CCTTC	7 cut(s)	650, 750, 931, 971, 1142, 1271, 1292
HpyCH4III	ACNGT	3 cut(s)	583, 994, 1027
HpyCH4IV	ACGT	4 cut(s)	474, 1503, 1638, 1907
HpyCH4V	TGCA	5 cut(s)	4, 827, 847, 864, 1716
HpyF3I	CTNAG	4 cut(s)	1155, 1364, 1424, 1726
HpySE526I	ACGT	4 cut(s)	474, 1503, 1638, 1907
Hsp92I	GRCGYC	1 cut(s)	1907
Hsp92II	CATG	6 cut(s)	24, 238, 737, 743, 1298, 1667
HspAI	GCGC	2 cut(s)	248, 1866
Ksp22I	TGATCA	2 cut(s)	1095, 1225
KspI	CCGCGG	1 cut(s)	510
Kzo9I	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
LguI	GCTCTTC	1 cut(s)	32
LmnI	GCTCC	3 cut(s)	113, 785, 1191
Lsp1109I	GCAGC	6 cut(s)	103, 308, 347, 805, 1258, 1350
LweI	GCATC	1 cut(s)	354
MaeI	CTAG	9 cut(s)	138, 245, 872, 1121, 1391, 1448, 1523, 1835, 1941
MaeII	ACGT	4 cut(s)	474, 1503, 1638, 1907
MaeIII	GTNAC	2 cut(s)	680, 1787
MalI	GATC	9 cut(s)	81, 314, 851, 1097, 1200, 1227, 1621, 1647, 1662
MboI	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
MfeI	CAATTG	1 cut(s)	774
MflI	RGATCY	1 cut(s)	312
MhlI	GDGCHC	2 cut(s)	209, 1718
MluCI	AATT	6 cut(s)	774, 1090, 1104, 1202, 1374, 1701
MlyI	GAGTC	4 cut(s)	413, 691, 1000, 1934
MmeI	TCCRAC	2 cut(s)	173, 1246
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	1758
MseI	TTAA	8 cut(s)	219, 465, 498, 954, 999, 1035, 1236, 1892
MslI	CAYNNNNRTG	1 cut(s)	738
MspA1I	CMGCKG	4 cut(s)	321, 509, 1249, 1274
MspI	CCGG	1 cut(s)	1431
MspR9I	CCNGG	1 cut(s)	1057
MunI	CAATTG	1 cut(s)	774
Mva1269I	GAATGC	2 cut(s)	611, 676
MvaI	CCWGG	1 cut(s)	1057
MvnI	CGCG	2 cut(s)	455, 509
NdeII	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
NheI	GCTAGC	1 cut(s)	137
NlaIII	CATG	6 cut(s)	24, 238, 737, 743, 1298, 1667
NlaIV	GGNNCC	3 cut(s)	208, 1193, 1461
NmuCI	GTSAC	1 cut(s)	1787
NsiI	ATGCAT	1 cut(s)	6
PaeR7I	CTCGAG	3 cut(s)	932, 961, 1529
PagI	TCATGA	2 cut(s)	1294, 1663
PceI	AGGCCT	1 cut(s)	1724
PciSI	GCTCTTC	1 cut(s)	32
PcsI	WCGNNNNNNNCGW	1 cut(s)	1632
PctI	GAATGC	2 cut(s)	611, 676
PdmI	GAANNNNTTC	1 cut(s)	1758
PfeI	GAWTC	3 cut(s)	762, 1360, 1586
PflMI	CCANNNNNTGG	1 cut(s)	1062
PleI	GAGTC	4 cut(s)	413, 691, 1000, 1933
PpsI	GAGTC	4 cut(s)	413, 691, 1000, 1933
Psp1406I	AACGTT	1 cut(s)	474
Psp6I	CCWGG	1 cut(s)	1055
PspGI	CCWGG	1 cut(s)	1055
PspN4I	GGNNCC	3 cut(s)	208, 1193, 1461
PspPI	GGNCC	3 cut(s)	504, 1151, 1459
PsrI	GAACNNNNNNTAC	2 cut(s)	1677, 1709
PsuI	RGATCY	1 cut(s)	312
PvuII	CAGCTG	1 cut(s)	1274
RsaI	GTAC	2 cut(s)	239, 991
RsaNI	GTAC	2 cut(s)	238, 990
RseI	CAYNNNNRTG	1 cut(s)	738
SacII	CCGCGG	1 cut(s)	510
SalI	GTCGAC	1 cut(s)	416
SapI	GCTCTTC	1 cut(s)	32
SaqAI	TTAA	8 cut(s)	219, 465, 498, 954, 999, 1035, 1236, 1892
Sau3AI	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
Sau96I	GGNCC	3 cut(s)	504, 1151, 1459
SchI	GAGTC	4 cut(s)	413, 691, 1000, 1934
ScrFI	CCNGG	1 cut(s)	1057
SduI	GDGCHC	2 cut(s)	209, 1718
SfaNI	GCATC	1 cut(s)	354
SfcI	CTRYAG	2 cut(s)	382, 1615
Sfr274I	CTCGAG	3 cut(s)	932, 961, 1529
Sfr303I	CCGCGG	1 cut(s)	510
SgrBI	CCGCGG	1 cut(s)	510
SinI	GGWCC	1 cut(s)	504
SlaI	CTCGAG	3 cut(s)	932, 961, 1529
SmiMI	CAYNNNNRTG	1 cut(s)	738
SmlI	CTYRAG	6 cut(s)	685, 910, 932, 961, 1529, 1654
SmoI	CTYRAG	6 cut(s)	685, 910, 932, 961, 1529, 1654
Sse9I	AATT	6 cut(s)	774, 1090, 1104, 1202, 1374, 1701
SseBI	AGGCCT	1 cut(s)	1724
SspI	AATATT	1 cut(s)	1345
SspMI	CTAG	9 cut(s)	138, 245, 872, 1121, 1391, 1448, 1523, 1835, 1941
StuI	AGGCCT	1 cut(s)	1724
StyD4I	CCNGG	1 cut(s)	1055
TaaI	ACNGT	3 cut(s)	583, 994, 1027
TaiI	ACGT	4 cut(s)	477, 1506, 1641, 1910
TaqI	TCGA	8 cut(s)	354, 417, 695, 933, 962, 1197, 1212, 1530
TasI	AATT	6 cut(s)	774, 1090, 1104, 1202, 1374, 1701
TauI	GCSGC	6 cut(s)	299, 306, 435, 449, 458, 512
TfiI	GAWTC	3 cut(s)	762, 1360, 1586
Tru1I	TTAA	8 cut(s)	219, 465, 498, 954, 999, 1035, 1236, 1892
Tru9I	TTAA	8 cut(s)	219, 465, 498, 954, 999, 1035, 1236, 1892
TscAI	CASTG	5 cut(s)	206, 280, 575, 1105, 1582
TseFI	GTSAC	1 cut(s)	1787
TseI	GCWGC	6 cut(s)	116, 321, 360, 818, 1246, 1338
Tsp45I	GTSAC	1 cut(s)	1787
TspDTI	ATGAA	7 cut(s)	34, 133, 939, 1188, 1283, 1311, 1840
TspGWI	ACGGA	2 cut(s)	394, 412
TspRI	CASTG	5 cut(s)	206, 280, 575, 1105, 1582
Van91I	CCANNNNNTGG	1 cut(s)	1062
VneI	GTGCAC	1 cut(s)	1714
VpaK11BI	GGWCC	1 cut(s)	504
XapI	RAATTY	2 cut(s)	1090, 1104
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1942
XhoI	CTCGAG	3 cut(s)	932, 961, 1529
XmiI	GTMKAC	1 cut(s)	417
XmnI	GAANNNNTTC	1 cut(s)	1758
XspI	CTAG	9 cut(s)	138, 245, 872, 1121, 1391, 1448, 1523, 1835, 1941
ZraI	GACGTC	1 cut(s)	1908
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.